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mashr version v0.2-11 (alpha)

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@pcarbo pcarbo released this 11 Mar 19:21
· 287 commits to master since this release

Major changes include:

  1. Incorporating Extreme Deconvolution code as part of mashr package.
  2. Linear transformation for posterior (for common baseline application) and a C++ implementation of it.
  3. A method to estimate null correlation; and consequently changes to the original estimate_null_correlation function.
  4. Function mash_update_data to update mash data (for common baseline, and for re-estimated V).
  5. Sampling from posterior (R implementation only) and estimate of sharing based on posterior samples.
  6. mixsqp is now required.