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BRCA2.txt
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BRCA2.txt
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sample_id sample_path result_type cnv_call chromosome start end
17327 /mnt/example/path/icr-mlpa/aligned/17327.sorted.bam normal-panel
17328 /mnt/example/path/icr-mlpa/aligned/17328.sorted.bam normal-panel
17329 /mnt/example/path/icr-mlpa/aligned/17329.sorted.bam normal-panel
17330 /mnt/example/path/icr-mlpa/aligned/17330.sorted.bam normal-panel
17398 /mnt/example/path/icr-mlpa/aligned/17398.sorted.bam normal
17334 /mnt/example/path/icr-mlpa/aligned/17334.sorted.bam normal
17341 /mnt/example/path/icr-mlpa/aligned/17341.sorted.bam normal
17375 /mnt/example/path/icr-mlpa/aligned/17375.sorted.bam normal
17299 /mnt/example/path/icr-mlpa/aligned/17299.sorted.bam normal-panel
17308 /mnt/example/path/icr-mlpa/aligned/17308.sorted.bam normal-panel
17304 /mnt/example/path/icr-mlpa/aligned/17304.sorted.bam normal
17343 /mnt/example/path/icr-mlpa/aligned/17343.sorted.bam normal
17364 /mnt/example/path/icr-mlpa/aligned/17364.sorted.bam positive DUP chr13 32950807 32950928
17305 /mnt/example/path/icr-mlpa/aligned/17305.sorted.bam positive DEL chr13 32893214 32893462
17306 /mnt/example/path/icr-mlpa/aligned/17306.sorted.bam normal
17339 /mnt/example/path/icr-mlpa/aligned/17339.sorted.bam normal-panel
17337 /mnt/example/path/icr-mlpa/aligned/17337.sorted.bam normal
17310 /mnt/example/path/icr-mlpa/aligned/17310.sorted.bam normal-panel
17332 /mnt/example/path/icr-mlpa/aligned/17332.sorted.bam normal
17311 /mnt/example/path/icr-mlpa/aligned/17311.sorted.bam normal-panel
17312 /mnt/example/path/icr-mlpa/aligned/17312.sorted.bam normal-panel
17313 /mnt/example/path/icr-mlpa/aligned/17313.sorted.bam normal-panel
17314 /mnt/example/path/icr-mlpa/aligned/17314.sorted.bam normal-panel
17318 /mnt/example/path/icr-mlpa/aligned/17318.sorted.bam normal
17315 /mnt/example/path/icr-mlpa/aligned/17315.sorted.bam normal-panel
17340 /mnt/example/path/icr-mlpa/aligned/17340.sorted.bam normal
17324 /mnt/example/path/icr-mlpa/aligned/17324.sorted.bam normal
17335 /mnt/example/path/icr-mlpa/aligned/17335.sorted.bam positive DEL chr13 32928998 32932066
17317 /mnt/example/path/icr-mlpa/aligned/17317.sorted.bam normal NA chr13 32889611 32972907
17331 /mnt/example/path/icr-mlpa/aligned/17331.sorted.bam normal
17303 /mnt/example/path/icr-mlpa/aligned/17303.sorted.bam normal
17307 /mnt/example/path/icr-mlpa/aligned/17307.sorted.bam normal
17301 /mnt/example/path/icr-mlpa/aligned/17301.sorted.bam normal
17309 /mnt/example/path/icr-mlpa/aligned/17309.sorted.bam normal-panel
17302 /mnt/example/path/icr-mlpa/aligned/17302.sorted.bam normal
17300 /mnt/example/path/icr-mlpa/aligned/17300.sorted.bam normal-panel
17388 /mnt/example/path/icr-mlpa/aligned/17388.sorted.bam normal
17387 /mnt/example/path/icr-mlpa/aligned/17387.sorted.bam normal-panel
17402 /mnt/example/path/icr-mlpa/aligned/17402.sorted.bam positive DEL chr13 32890598 32890664
17400 /mnt/example/path/icr-mlpa/aligned/17400.sorted.bam normal
17322 /mnt/example/path/icr-mlpa/aligned/17322.sorted.bam positive DEL chr13 32903580 32907524
17298 /mnt/example/path/icr-mlpa/aligned/17298.sorted.bam positive DUP chr13 32950807 32950928
17373 /mnt/example/path/icr-mlpa/aligned/17373.sorted.bam normal-panel
17376 /mnt/example/path/icr-mlpa/aligned/17376.sorted.bam normal-panel
17382 /mnt/example/path/icr-mlpa/aligned/17382.sorted.bam normal-panel
17397 /mnt/example/path/icr-mlpa/aligned/17397.sorted.bam normal-panel
17360 /mnt/example/path/icr-mlpa/aligned/17360.sorted.bam normal-panel
17399 /mnt/example/path/icr-mlpa/aligned/17399.sorted.bam normal-panel
17392 /mnt/example/path/icr-mlpa/aligned/17392.sorted.bam normal
17361 /mnt/example/path/icr-mlpa/aligned/17361.sorted.bam normal-panel
17357 /mnt/example/path/icr-mlpa/aligned/17357.sorted.bam positive DEL chr13 32950807 32954282
17342 /mnt/example/path/icr-mlpa/aligned/17342.sorted.bam positive DEL chr13 32889611 32915333
17356 /mnt/example/path/icr-mlpa/aligned/17356.sorted.bam normal-panel
17377 /mnt/example/path/icr-mlpa/aligned/17377.sorted.bam normal
17386 /mnt/example/path/icr-mlpa/aligned/17386.sorted.bam normal
17390 /mnt/example/path/icr-mlpa/aligned/17390.sorted.bam normal
17378 /mnt/example/path/icr-mlpa/aligned/17378.sorted.bam normal
17401 /mnt/example/path/icr-mlpa/aligned/17401.sorted.bam normal-panel
17370 /mnt/example/path/icr-mlpa/aligned/17370.sorted.bam normal-panel
17379 /mnt/example/path/icr-mlpa/aligned/17379.sorted.bam normal
17393 /mnt/example/path/icr-mlpa/aligned/17393.sorted.bam positive DEL chr13 32889611 32890664
17385 /mnt/example/path/icr-mlpa/aligned/17385.sorted.bam normal
17391 /mnt/example/path/icr-mlpa/aligned/17391.sorted.bam normal-panel
17389 /mnt/example/path/icr-mlpa/aligned/17389.sorted.bam normal-panel
17367 /mnt/example/path/icr-mlpa/aligned/17367.sorted.bam normal-panel
17368 /mnt/example/path/icr-mlpa/aligned/17368.sorted.bam normal-panel
17380 /mnt/example/path/icr-mlpa/aligned/17380.sorted.bam positive DUP chr13 32889611 32893462
17359 /mnt/example/path/icr-mlpa/aligned/17359.sorted.bam normal
17394 /mnt/example/path/icr-mlpa/aligned/17394.sorted.bam normal
17396 /mnt/example/path/icr-mlpa/aligned/17396.sorted.bam normal
17369 /mnt/example/path/icr-mlpa/aligned/17369.sorted.bam normal
17316 /mnt/example/path/icr-mlpa/aligned/17316.sorted.bam normal
17371 /mnt/example/path/icr-mlpa/aligned/17371.sorted.bam normal