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Add support for spinal rootlets segmentation #69

Add support for spinal rootlets segmentation

Add support for spinal rootlets segmentation #69

Workflow file for this run

# This is a basic workflow to help you get started with Actions
name: CI
# Controls when the action will run.
on:
# Triggers the workflow on push or pull request events but only for the master branch
push:
branches: [ master ]
pull_request:
branches: '*'
# Allows you to run this workflow manually from the Actions tab
workflow_dispatch:
# A workflow run is made up of one or more jobs that can run sequentially or in parallel
jobs:
# This workflow contains a single job called "build"
build:
# The type of runner that the job will run on
runs-on: ubuntu-latest
# Steps represent a sequence of tasks that will be executed as part of the job
steps:
# Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it
- uses: actions/checkout@v4
- name: Install Python 3
uses: actions/setup-python@v4
with:
python-version: 3.8.18
- name: Install dependencies
run: |
python -m pip install --upgrade pip
pip install -r requirements.txt
# https://github.com/spinalcordtoolbox/spinalcordtoolbox/blob/master/.ci.sh
- name: Install SCT
run: |
git clone https://github.com/spinalcordtoolbox/spinalcordtoolbox.git
cd spinalcordtoolbox
./.ci.sh -i
- name: Run tests with pytest
run: |
python -m pytest -v tests/test_utils.py
python -m pytest -v tests/test_ask_if_modify.py
python -m pytest -v tests/test_create_json.py