v0.12.1

update python dependency to <3.12

v0.12.0

update the documentation

I guess this should have been a patch rather than a minor release...oh well

v0.11.0

store first stim value; update docs overview

v0.10.0

Adds all-optical control: 2p opto and calcium imaging. Refactors Light to its own module and introduces a new LightDependent class to reuse logic for light-dependent opsins and indicators.

v0.9.0

Some big changes, not all reflected in the documentation yet. Though the tutorials all run right

• Many-to-many light-opsin relationships
  • light has light model
  • light and opsin injected separately
• Neo export
• Revised API (inject method for all devices)
• other assorted things

v0.8.0: Cleo rename (#26)

The package has been renamed to cleo and module names have been shortened

v0.7.0

v0.7.0 (#24)

* update CONTRIBUTING

* make opto viz rasterized by default

* Refactor opsin models for simplicity

* bump to v0.7.0

* fix name conflicts for opto synapses

* rename opsin_model test

* fix T bug by finishing refactor to 1D arrays for vecs

* fix T_threshold name

* update brian dep

* slightly improve LQR tutorial

* improved video viz tutorial

* change to Furo theme

* dark plots for tutorials, tweak opto

* tweak video viz tutorial colors

* optimize for new theme

* add Furo to rtd requirements [skip ci]

* fix overview doc headers

* admonition instead of sidebar in overview

* opto warning instead of error for negative light

* tweak tutorials, remove seaborn

v0.6.0

Now returns (fig, ax) from plot(), allowing for more customization of visualizations.

v0.5.1

plot only neurons in lims, fix figargs bug, v0.5.1

v0.5.0

Improve opto viz, uniform cylinders (#23)

* add uniform cylinder, use for opto and coords, use 1D arrays

* add customizable device visualization

* re-execute opto tutorial

* bump to v0.5.0

* tweak Fibonacci spiral

* fix random cylinder [skip ci]