requirements.txt

# This file may be used to create an environment using:
# $ conda create --name <env> --file <this file>
# platform: linux-64
_libgcc_mutex=0.1=main
_openmp_mutex=5.1=1_gnu
abseil-cpp=20211102.0=hd4dd3e8_0
absl-py=2.0.0=pypi_0
aiohttp=3.9.5=pypi_0
aiohttp-cors=0.7.0=pypi_0
aiosignal=1.3.1=pypi_0
altgraph=0.17.4=pypi_0
annotated-types=0.6.0=pypi_0
anyio=4.3.0=pypi_0
argon2-cffi=23.1.0=pypi_0
argon2-cffi-bindings=21.2.0=pypi_0
array-record=0.5.1=pypi_0
arrow=1.3.0=pypi_0
arrow-cpp=14.0.2=h374c478_1
asttokens=2.4.1=pypi_0
astunparse=1.6.3=pypi_0
async-lru=2.0.4=pypi_0
async-timeout=4.0.3=pypi_0
attrs=23.2.0=pypi_0
aws-c-auth=0.6.19=h5eee18b_0
aws-c-cal=0.5.20=hdbd6064_0
aws-c-common=0.8.5=h5eee18b_0
aws-c-compression=0.2.16=h5eee18b_0
aws-c-event-stream=0.2.15=h6a678d5_0
aws-c-http=0.6.25=h5eee18b_0
aws-c-io=0.13.10=h5eee18b_0
aws-c-mqtt=0.7.13=h5eee18b_0
aws-c-s3=0.1.51=hdbd6064_0
aws-c-sdkutils=0.1.6=h5eee18b_0
aws-checksums=0.1.13=h5eee18b_0
aws-crt-cpp=0.18.16=h6a678d5_0
aws-sdk-cpp=1.10.55=h721c034_0
babel=2.14.0=pypi_0
bcftools=1.6=0
beautifulsoup4=4.12.3=pypi_0
biopython=1.78=py39h7f8727e_0
blas=1.1=openblas
bleach=6.1.0=pypi_0
bokeh=3.4.1=py39h2f386ee_0
boost-cpp=1.73.0=h7f8727e_12
bottleneck=1.3.8=pypi_0
brotli=1.0.9=h5eee18b_7
brotli-bin=1.0.9=h5eee18b_7
brotli-python=1.0.9=py39h6a678d5_8
bzip2=1.0.8=h7f98852_4
c-ares=1.19.0=h5eee18b_0
ca-certificates=2024.7.2=h06a4308_0
cachetools=5.3.2=pypi_0
cairo=1.16.0=hb05425b_5
certifi=2023.7.22=pypi_0
cffi=1.16.0=pypi_0
charset-normalizer=3.3.1=pypi_0
click=8.1.7=py39h06a4308_0
cloudpickle=3.0.0=pypi_0
colorama=0.4.6=pyhd8ed1ab_0
coloredlogs=15.0.1=pypi_0
colorful=0.5.6=pypi_0
comm=0.2.1=pypi_0
contourpy=1.2.1=pypi_0
cuda-cccl=12.1.55=0
cuda-command-line-tools=12.1.0=0
cuda-compiler=12.1.0=0
cuda-cudart=12.1.55=0
cuda-cudart-dev=12.1.55=0
cuda-cudart-static=12.1.55=0
cuda-cuobjdump=12.1.55=0
cuda-cupti=12.1.62=0
cuda-cupti-static=12.1.62=0
cuda-cuxxfilt=12.1.55=0
cuda-documentation=12.1.55=0
cuda-driver-dev=12.1.55=0
cuda-gdb=12.1.55=0
cuda-libraries=12.1.0=0
cuda-libraries-dev=12.1.0=0
cuda-libraries-static=12.1.0=0
cuda-nsight=12.1.55=0
cuda-nsight-compute=12.1.0=0
cuda-nvcc=12.1.66=0
cuda-nvdisasm=12.1.55=0
cuda-nvml-dev=12.1.55=0
cuda-nvprof=12.1.55=0
cuda-nvprune=12.1.55=0
cuda-nvrtc=12.1.55=0
cuda-nvrtc-dev=12.1.55=0
cuda-nvrtc-static=12.1.55=0
cuda-nvtx=12.1.66=0
cuda-nvvp=12.1.55=0
cuda-opencl=12.1.56=0
cuda-opencl-dev=12.1.56=0
cuda-profiler-api=12.1.55=0
cuda-sanitizer-api=12.1.55=0
cuda-toolkit=12.1.0=0
cuda-tools=12.1.0=0
cuda-visual-tools=12.1.0=0
cudatoolkit=11.8.0=h6a678d5_0
cudnn=8.9.2.26=cuda11_0
cupy-cuda12x=13.1.0=pypi_0
curl=8.1.1=hdbd6064_2
cycler=0.11.0=pyhd3eb1b0_0
cytoolz=0.12.2=py39h5eee18b_0
cyvcf2=0.31.1=pypi_0
dask=2024.2.1=pypi_0
dask-core=2024.5.0=py39h06a4308_0
dask-expr=1.0.12=pypi_0
datatable=1.1.0=pypi_0
dbus=1.13.18=hb2f20db_0
debugpy=1.8.1=pypi_0
decorator=5.1.1=pypi_0
defusedxml=0.7.1=pypi_0
demes=0.2.3=pypi_0
dill=0.3.8=pypi_0
distlib=0.3.8=pypi_0
distributed=2024.2.1=pypi_0
dm-tree=0.1.8=pypi_0
eigen=3.4.0=h4bd325d_0
etils=1.5.2=pypi_0
exceptiongroup=1.2.0=pypi_0
executing=2.0.1=pypi_0
expat=2.2.10=h9c3ff4c_0
fastjsonschema=2.19.1=pypi_0
fastrlock=0.8.2=pypi_0
ffmpeg=4.2.2=h20bf706_0
filelock=3.13.4=pypi_0
flatbuffers=23.5.26=pypi_0
fontconfig=2.14.1=hef1e5e3_0
fonttools=4.25.0=pyhd3eb1b0_0
fqdn=1.5.1=pypi_0
freetype=2.10.4=h0708190_1
frozenlist=1.4.1=pypi_0
fsspec=2024.2.0=pypi_0
gast=0.5.4=pypi_0
gds-tools=1.6.0.25=0
gflags=2.2.2=h6a678d5_1
giflib=5.2.1=h36c2ea0_2
glib=2.69.1=he621ea3_2
glog=0.5.0=h6a678d5_1
gmp=6.2.1=h58526e2_0
gnutls=3.6.13=h85f3911_1
google-api-core=2.18.0=pypi_0
google-auth=2.23.3=pypi_0
google-auth-oauthlib=1.0.0=pypi_0
google-pasta=0.2.0=pypi_0
googleapis-common-protos=1.63.0=pypi_0
graphite2=1.3.14=h295c915_1
grpc-cpp=1.48.2=he1ff14a_1
grpcio=1.59.0=pypi_0
gst-plugins-base=1.14.1=h6a678d5_1
gstreamer=1.14.1=h5eee18b_1
h11=0.14.0=pypi_0
h5py=3.10.0=pypi_0
harfbuzz=4.3.0=hf52aaf7_1
hdf5=1.12.1=h2b7332f_3
heapdict=1.0.1=pyhd3eb1b0_0
hickle=5.0.2=pypi_0
httpcore=1.0.4=pypi_0
httpx=0.27.0=pypi_0
humanfriendly=10.0=pypi_0
icu=58.2=hf484d3e_1000
idna=3.4=pypi_0
imageio=2.34.0=pypi_0
importlib-metadata=6.8.0=pypi_0
importlib_resources=5.2.0=pyhd3eb1b0_1
intel-openmp=2023.1.0=hdb19cb5_46305
ipykernel=6.29.2=pypi_0
ipython=8.18.1=pypi_0
ipywidgets=8.1.2=pypi_0
isoduration=20.11.0=pypi_0
jedi=0.19.1=pypi_0
jinja2=3.1.3=pypi_0
joblib=1.2.0=py39h06a4308_0
jpeg=9e=h166bdaf_1
json5=0.9.17=pypi_0
jsonpointer=2.4=pypi_0
jsonschema=4.21.1=pypi_0
jsonschema-specifications=2023.12.1=pypi_0
jupyter=1.0.0=pypi_0
jupyter-client=8.6.0=pypi_0
jupyter-console=6.6.3=pypi_0
jupyter-core=5.7.1=pypi_0
jupyter-events=0.9.0=pypi_0
jupyter-lsp=2.2.3=pypi_0
jupyter-server=2.12.5=pypi_0
jupyter-server-terminals=0.5.2=pypi_0
jupyterlab=4.1.2=pypi_0
jupyterlab-pygments=0.3.0=pypi_0
jupyterlab-server=2.25.3=pypi_0
jupyterlab-widgets=3.0.10=pypi_0
kaggle=1.6.12=pypi_0
kagglehub=0.2.0=pypi_0
keras=2.14.0=pypi_0
keras-core=0.1.7=pypi_0
keras-nlp=0.8.2=pypi_0
kiwisolver=1.4.4=py39h6a678d5_0
krb5=1.20.1=h143b758_1
lame=3.100=h7f98852_1001
latexcodec=2.0.1=pyh9f0ad1d_0
lazy-loader=0.3=pypi_0
lcms2=2.12=h3be6417_0
ld_impl_linux-64=2.38=h1181459_1
lerc=3.0=h295c915_0
libblas=3.9.0=15_linux64_openblas
libboost=1.73.0=h28710b8_12
libbrotlicommon=1.0.9=h5eee18b_7
libbrotlidec=1.0.9=h5eee18b_7
libbrotlienc=1.0.9=h5eee18b_7
libcblas=3.9.0=15_linux64_openblas
libclang=16.0.6=pypi_0
libcublas=12.1.0.26=0
libcublas-dev=12.1.0.26=0
libcublas-static=12.1.0.26=0
libcufft=11.0.2.4=0
libcufft-dev=11.0.2.4=0
libcufft-static=11.0.2.4=0
libcufile=1.6.0.25=0
libcufile-dev=1.6.0.25=0
libcufile-static=1.6.0.25=0
libcurand=10.3.2.56=0
libcurand-dev=10.3.2.56=0
libcurand-static=10.3.2.56=0
libcurl=8.1.1=h251f7ec_2
libcusolver=11.4.4.55=0
libcusolver-dev=11.4.4.55=0
libcusolver-static=11.4.4.55=0
libcusparse=12.0.2.55=0
libcusparse-dev=12.0.2.55=0
libcusparse-static=12.0.2.55=0
libdeflate=1.17=h5eee18b_0
libedit=3.1.20221030=h5eee18b_0
libev=4.33=h516909a_1
libevent=2.1.12=hdbd6064_1
libffi=3.4.4=h6a678d5_0
libgcc=7.2.0=h69d50b8_2
libgcc-ng=11.2.0=h1234567_1
libgfortran-ng=11.2.0=h00389a5_1
libgfortran5=11.2.0=h1234567_1
libgomp=11.2.0=h1234567_1
liblapack=3.9.0=15_linux64_openblas
libllvm10=10.0.1=he513fc3_3
libnghttp2=1.52.0=h2d74bed_1
libnpp=12.0.2.50=0
libnpp-dev=12.0.2.50=0
libnpp-static=12.0.2.50=0
libnvjitlink=12.1.55=0
libnvjitlink-dev=12.1.55=0
libnvjpeg=12.1.0.39=0
libnvjpeg-dev=12.1.0.39=0
libnvjpeg-static=12.1.0.39=0
libnvvm-samples=12.1.55=0
libopenblas=0.3.20=pthreads_h78a6416_0
libopus=1.3.1=h7f98852_1
libpng=1.6.39=h5eee18b_0
libpq=12.15=hdbd6064_1
libprotobuf=3.20.3=he621ea3_0
libpython-static=3.9.19=h6a678d5_0
libssh2=1.10.0=hdbd6064_2
libstdcxx-ng=11.2.0=h1234567_1
libthrift=0.15.0=h1795dd8_2
libtiff=4.5.0=h6a678d5_2
libvpx=1.7.0=h439df22_0
libwebp=1.2.4=h11a3e52_1
libwebp-base=1.2.4=h5eee18b_1
libxcb=1.15=h7f8727e_0
libxkbcommon=1.0.1=hfa300c1_0
libxml2=2.9.14=h74e7548_0
libxslt=1.1.35=h4e12654_0
linkify-it-py=2.0.3=pypi_0
llvmlite=0.43.0=pypi_0
locket=1.0.0=py39h06a4308_0
lz4=4.3.3=pypi_0
lz4-c=1.9.4=h6a678d5_0
markdown=3.5=pypi_0
markdown-it-py=3.0.0=pypi_0
markupsafe=2.1.3=py39h5eee18b_0
matplotlib=3.7.1=py39h06a4308_1
matplotlib-base=3.7.1=py39h417a72b_1
matplotlib-inline=0.1.6=pypi_0
mdit-py-plugins=0.4.0=pypi_0
mdurl=0.1.2=pypi_0
memray=1.12.0=pypi_0
mistune=3.0.2=pypi_0
mkl=2023.1.0=h213fc3f_46343
mkl-service=2.4.0=py39h5eee18b_1
ml-dtypes=0.2.0=pypi_0
modin=0.30.1=pypi_0
modin-spreadsheet=0.1.2=pypi_0
mpmath=1.3.0=pypi_0
msgpack=1.0.8=pypi_0
msgpack-python=1.0.3=py39hd09550d_0
msprime=1.3.1=pypi_0
multidict=6.0.5=pypi_0
munkres=1.1.4=py_0
namex=0.0.7=pypi_0
nbclient=0.9.0=pypi_0
nbconvert=7.16.1=pypi_0
nbformat=5.9.2=pypi_0
ncurses=6.4=h6a678d5_0
nest-asyncio=1.6.0=pypi_0
nettle=3.6=he412f7d_0
networkx=3.2.1=pypi_0
newick=1.9.0=pypi_0
notebook=7.1.1=pypi_0
notebook-shim=0.2.4=pypi_0
nsight-compute=2023.1.0.15=0
nspr=4.35=h6a678d5_0
nss=3.89.1=h6a678d5_0
nuitka=2.3=pypi_0
numba=0.60.0=pypi_0
numexpr=2.8.4=py39hd2a5715_1
numpy=1.26.4=pypi_0
numpy-base=1.24.3=py39h1e6e340_0
numpy-hilbert-curve=1.0.1=pypi_0
nvidia-cublas-cu11=11.11.3.6=pypi_0
nvidia-cublas-cu12=12.4.5.8=pypi_0
nvidia-cuda-cupti-cu11=11.8.87=pypi_0
nvidia-cuda-nvcc-cu11=11.8.89=pypi_0
nvidia-cuda-runtime-cu11=11.8.89=pypi_0
nvidia-cudnn-cu11=8.7.0.84=pypi_0
nvidia-cudnn-cu12=9.1.1.17=pypi_0
nvidia-cufft-cu11=10.9.0.58=pypi_0
nvidia-curand-cu11=10.3.0.86=pypi_0
nvidia-cusolver-cu11=11.4.1.48=pypi_0
nvidia-cusparse-cu11=11.7.5.86=pypi_0
nvidia-nccl-cu11=2.16.5=pypi_0
nvidia-pyindex=1.0.9=pypi_0
oauthlib=3.2.2=pypi_0
onnx=1.16.1=pypi_0
onnxruntime=1.18.1=pypi_0
openblas=0.3.20=pthreads_h320a7e8_0
opencensus=0.11.4=pypi_0
opencensus-context=0.1.3=pypi_0
opencv=4.6.0=py39ha16400d_5
openh264=2.1.1=h4ff587b_0
openjpeg=2.4.0=h3ad879b_0
openssl=3.0.14=h5eee18b_0
opt-einsum=3.3.0=pypi_0
orc=1.7.4=hb3bc3d3_1
ordered-set=4.1.0=pypi_0
overrides=7.7.0=pypi_0
packaging=23.2=pyhd8ed1ab_0
pandas=2.2.2=pypi_0
pandocfilters=1.5.1=pypi_0
parso=0.8.3=pypi_0
partd=1.4.1=py39h06a4308_0
pcre=8.45=h9c3ff4c_0
pexpect=4.9.0=pypi_0
pillow=9.4.0=py39h6a678d5_0
pip=23.2.1=py39h06a4308_0
pixman=0.40.0=h36c2ea0_0
platformdirs=3.11.0=pypi_0
ply=3.11=py39h06a4308_0
polars=0.20.25=pypi_0
prometheus-client=0.20.0=pypi_0
promise=2.3=pypi_0
prompt-toolkit=3.0.43=pypi_0
proto-plus=1.23.0=pypi_0
protobuf=3.20.3=pypi_0
psutil=5.9.8=pypi_0
ptyprocess=0.7.0=pypi_0
pure-eval=0.2.2=pypi_0
py-spy=0.3.14=pypi_0
pyarrow=16.0.0=pypi_0
pyarrow-hotfix=0.6=pypi_0
pyasn1=0.5.0=pypi_0
pyasn1-modules=0.3.0=pypi_0
pycparser=2.21=pypi_0
pydantic=2.7.0=pypi_0
pydantic-core=2.18.1=pypi_0
pydot=1.4.2=pypi_0
pyfaidx=0.8.1.1=pyhdfd78af_0
pygments=2.17.2=pypi_0
pyinstaller=6.7.0=pypi_0
pyinstaller-hooks-contrib=2024.6=pypi_0
pyparsing=3.0.9=py39h06a4308_0
pyqt=5.15.7=py39h6a678d5_1
pyqt5-sip=12.11.0=py39h6a678d5_1
pysam=0.22.1=pypi_0
pysocks=1.7.1=py39h06a4308_0
python=3.9.17=h955ad1f_0
python-dateutil=2.8.2=pyhd3eb1b0_0
python-graphviz=0.20.1=pypi_0
python-json-logger=2.0.7=pypi_0
python-lmdb=1.4.1=py39h6a678d5_0
python-slugify=8.0.4=pypi_0
python-tzdata=2023.3=pyhd3eb1b0_0
python_abi=3.9=2_cp39
pytz=2022.7=py39h06a4308_0
pyvcf3=1.0.3=pyhdfd78af_0
pyyaml=6.0.1=py39h5eee18b_0
pyzmq=25.1.2=pypi_0
qt-main=5.15.2=h327a75a_7
qt-webengine=5.15.9=hd2b0992_4
qtconsole=5.5.1=pypi_0
qtpy=2.4.1=pypi_0
qtwebkit=5.212=h4eab89a_4
ray=2.11.0=pypi_0
re2=2022.04.01=h295c915_0
readline=8.2=h5eee18b_0
referencing=0.33.0=pypi_0
regex=2023.12.25=pypi_0
requests=2.31.0=pypi_0
requests-oauthlib=1.3.1=pypi_0
rfc3339-validator=0.1.4=pypi_0
rfc3986-validator=0.1.1=pypi_0
rich=13.7.1=pypi_0
rpds-py=0.18.0=pypi_0
rsa=4.9=pypi_0
ruamel-yaml=0.18.6=pypi_0
ruamel-yaml-clib=0.2.8=pypi_0
s2n=1.3.27=hdbd6064_0
scikit-allel=1.3.7=pypi_0
scikit-image=0.22.0=pypi_0
scikit-learn=1.3.0=py39h1128e8f_0
scipy=1.13.1=pypi_0
seaborn=0.13.2=pypi_0
send2trash=1.8.2=pypi_0
setuptools=68.2.2=pyhd8ed1ab_0
sip=6.6.2=py39h6a678d5_0
six=1.16.0=pyhd3eb1b0_1
smart-open=7.0.4=pypi_0
snappy=1.1.10=h6a678d5_1
sniffio=1.3.1=pypi_0
sortedcontainers=2.4.0=pyhd3eb1b0_0
soupsieve=2.5=pypi_0
sqlite=3.41.2=h5eee18b_0
stack-data=0.6.3=pypi_0
svgwrite=1.4.3=pypi_0
sympy=1.12.1=pypi_0
tbb=2021.8.0=hdb19cb5_0
tblib=3.0.0=pypi_0
tensorboard=2.14.1=pypi_0
tensorboard-data-server=0.7.2=pypi_0
tensorflow=2.14.0=pypi_0
tensorflow-addons=0.22.0=pypi_0
tensorflow-datasets=4.5.0=pypi_0
tensorflow-estimator=2.14.0=pypi_0
tensorflow-io=0.37.0=pypi_0
tensorflow-io-gcs-filesystem=0.37.0=pypi_0
tensorflow-metadata=1.15.0=pypi_0
tensorflow-probability=0.22.1=pypi_0
tensorflow-text=2.16.1=pypi_0
tensorrt=8.5.3.1=pypi_0
termcolor=2.3.0=pypi_0
terminado=0.18.0=pypi_0
text-unidecode=1.3=pypi_0
textual=0.57.1=pypi_0
tf2onnx=1.16.1=pypi_0
threadpoolctl=2.2.0=pyh0d69192_0
tifffile=2024.2.12=pypi_0
tinycss2=1.2.1=pypi_0
tk=8.6.12=h1ccaba5_0
toml=0.10.2=pyhd3eb1b0_0
tomli=2.0.1=pypi_0
toolz=0.12.0=py39h06a4308_0
tornado=6.3.2=py39h5eee18b_0
tqdm=4.66.1=pyhd8ed1ab_0
traitlets=5.14.1=pypi_0
tskit=0.5.6=pypi_0
typeguard=2.13.3=pypi_0
types-python-dateutil=2.8.19.20240106=pypi_0
typing-extensions=4.8.0=pypi_0
tzdata=2023c=h04d1e81_0
uc-micro-py=1.0.3=pypi_0
uri-template=1.3.0=pypi_0
urllib3=2.0.7=pypi_0
utf8proc=2.6.1=h5eee18b_1
vcfpy=0.13.8=pypi_0
virtualenv=20.25.3=pypi_0
wcwidth=0.2.13=pypi_0
webcolors=1.13=pypi_0
webencodings=0.5.1=pypi_0
websocket-client=1.7.0=pypi_0
werkzeug=3.0.1=pypi_0
wheel=0.41.2=pyhd8ed1ab_0
widgetsnbextension=4.0.10=pypi_0
wrapt=1.14.1=pypi_0
x264=1!157.20191217=h7b6447c_0
xyzservices=2024.4.0=pypi_0
xz=5.4.2=h5eee18b_0
yaml=0.2.5=h7b6447c_0
yarl=1.9.4=pypi_0
zict=3.0.0=py39h06a4308_0
zipp=3.17.0=pyhd8ed1ab_0
zlib=1.2.13=h5eee18b_0
zstandard=0.22.0=pypi_0
zstd=1.5.5=hc292b87_0