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Issues list

Co-authors list discussion
#59 opened Oct 18, 2024 by rohanbanerjee
Upload the held-out test corrected data to Openneuro
#57 opened Jun 24, 2024 by rohanbanerjee
Update the gt segmentations of the data uploaded on Openneuro
#56 opened Jun 22, 2024 by rohanbanerjee
Add config files in repos
#55 opened Jun 14, 2024 by jcohenadad
@rohanbanerjee
Cleanup repos
#54 opened Jun 14, 2024 by jcohenadad
Release latest model v1.0
#53 opened Jun 14, 2024 by jcohenadad
update instructions on README
#52 opened Jun 14, 2024 by jcohenadad
Try more aggressive padding during inference
#49 opened May 31, 2024 by rohanbanerjee
@rohanbanerjee
Strategy for model training
#48 opened May 31, 2024 by rohanbanerjee
Single model training with all good ground truth
#47 opened May 31, 2024 by rohanbanerjee
@rohanbanerjee
2
Tracking images with artifacts
#46 opened May 31, 2024 by rohanbanerjee
Add more sites
#45 opened May 17, 2024 by jcohenadad
Comparison with different methods with our fmri sc segmentation model
#43 opened May 17, 2024 by rohanbanerjee
Creation of unified script to create the new datasets from each round of active learning training enhancement New feature or request
#37 opened Apr 5, 2024 by rohanbanerjee
@rohanbanerjee
Retraining vs Fine-tuning in nnUNetv2 question Further information is requested
#36 opened Mar 26, 2024 by rohanbanerjee
2
Creation of a held-out test data for active learning training phase validation
#33 opened Feb 22, 2024 by rohanbanerjee
7 tasks done
@rohanbanerjee
3
A way to assess normalization quality help wanted Extra attention is needed question Further information is requested
#32 opened Feb 16, 2024 by MerveKaptan
@MerveKaptan
6
Project management
#28 opened Nov 27, 2023 by jcohenadad
Consider training a cord + CSF mask
#27 opened Nov 16, 2023 by jcohenadad
Add Arnaud's data
#26 opened Nov 9, 2023 by jcohenadad
@rohanbanerjee
5
No segmentation of first and last slice in the ground truth
#22 opened Oct 4, 2023 by rohanbanerjee
14
Experiment: Inference of a 3d nnUNet on a single slice
#20 opened Sep 11, 2023 by rohanbanerjee
3
List of beta testers of this project
#19 opened Sep 6, 2023 by rohanbanerjee
Masks drawn based on tSNR image instead of mean dataset Anything and everything related to the dataset
#18 opened Jun 23, 2023 by MerveKaptan
@rohanbanerjee
1
MGH dataset - Creating json files from niftis dataset Anything and everything related to the dataset
#17 opened Jun 23, 2023 by MerveKaptan
@rohanbanerjee
1
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