Merge pull request #1064 from VincentBeaud/new_endpoint_scoring #987
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name: Scilpy test suite | |
on: | |
push: | |
branches: | |
- master | |
pull_request: | |
branches: | |
- master | |
concurrency: | |
group: ${{ github.workflow }}-${{ github.event.pull_request.number || github.ref }} | |
cancel-in-progress: true | |
env: | |
MPLBACKEND: agg | |
OPENBLAS_NUM_THREADS: 1 | |
jobs: | |
test: | |
runs-on: scilus-runners | |
if: github.repository == 'scilus/scilpy' | |
steps: | |
- name: Checkout repository at merge | |
uses: actions/checkout@v4 | |
- name: Fetch python version from repository | |
id: python-selector | |
run: echo "python-version=$(head -1 .python-version)" >> $GITHUB_OUTPUT | |
- name: Set up Python for Scilpy | |
uses: actions/[email protected] | |
with: | |
python-version: ${{ steps.python-selector.outputs.python-version }} | |
cache: 'pip' | |
- name: Install non-python dependencies | |
run: | | |
sudo apt-get update | |
sudo apt-get install -y \ | |
build-essential \ | |
curl \ | |
git \ | |
libblas-dev \ | |
liblapack-dev \ | |
libfreetype6-dev | |
- name: Install Scilpy | |
run: | | |
export SETUPTOOLS_USE_DISTUTILS=stdlib | |
python -m pip install --upgrade pip wheel | |
python -m pip install --upgrade "setuptools<71.0.0" | |
python -m pip install -e . | |
- name: Run tests | |
run: | | |
export C_INCLUDE_PATH=$pythonLocation/include/python${{ steps.python-selector.outputs.python-version }}:$C_INCLUDE_PATH | |
pytest --cov-report term-missing:skip-covered | |
- name: Save test results and coverage | |
uses: actions/upload-artifact@v4 | |
id: test-coverage-results | |
with: | |
name: test-coverage-${{ github.run_id }} | |
retention-days: 1 | |
include-hidden-files: true | |
path: | | |
.coverage | |
.test_reports/ | |
coverage: | |
runs-on: scilus-runners | |
if: github.repository == 'scilus/scilpy' | |
needs: test | |
steps: | |
- name: Checkout repository at merge | |
uses: actions/checkout@v4 | |
- name: Set up Python for codecov upload | |
uses: actions/[email protected] | |
with: | |
python-version: '3.10' | |
cache: 'pip' | |
- name: Install pycoverage | |
run: pip install coverage | |
- name: Download test results and coverage | |
uses: actions/download-artifact@v4 | |
with: | |
name: test-coverage-${{ github.run_id }} | |
- name: Upload coverage reports to Codecov | |
uses: codecov/codecov-action@v4 | |
with: | |
token: ${{ secrets.CODECOV_TOKEN }} | |
flags: unittests | |
name: scilpy-unittests-${{ github.run_id }}-${{ github.run_attempt }} | |
verbose: true | |
fail_ci_if_error: true | |
plugin: pycoverage | |