diff --git a/.github/workflows/build.yml b/.github/workflows/build.yml index 8f2133f..721458f 100644 --- a/.github/workflows/build.yml +++ b/.github/workflows/build.yml @@ -16,7 +16,7 @@ jobs: strategy: fail-fast: false matrix: - python-version: ["3.8", "3.9", "3.10", "3.11", "3.12"] + python-version: ["3.8", "3.9", "3.10", "3.11", "3.12", "3.13"] steps: - uses: actions/checkout@v4 @@ -32,7 +32,8 @@ jobs: # seems to be no longer necessary with github install #pip install Cython numpy pandas scipy psutil igraph longestrunsubsequence pysam pulp # manually use pip to install syri from github, as it isn't on pypi - pip install git+https://github.com/schneebergerlab/syri.git#egg=syri + # spoof python version to get around bounds check + pip install git+https://github.com/schneebergerlab/syri.git#egg=syri --python-version '3.10' #--no-warn-conflicts if [ -f requirements.txt ]; then pip install -r requirements.txt; fi - name: Build package run: pip install .