From 79bf62948615a394ce92ad6951937756b61b41ca Mon Sep 17 00:00:00 2001 From: Leon Rauschning <99650940+lrauschning@users.noreply.github.com> Date: Tue, 10 Dec 2024 17:13:06 +0800 Subject: [PATCH] add shell parameter --- action.yml | 4 ++++ 1 file changed, 4 insertions(+) diff --git a/action.yml b/action.yml index 61c546e..405e062 100644 --- a/action.yml +++ b/action.yml @@ -21,6 +21,7 @@ runs: cache: pip - name: Update pip run: python -m pip install --upgrade pip setuptools + shell: bash - name: Install SyRI manually run: | # manually install syris dependencies @@ -29,7 +30,10 @@ runs: # manually use pip to install syri from github, as it isn't on pypi # spoof python version to get around bounds check pip install 'git+https://github.com/schneebergerlab/syri.git' --python-version '3.10' --no-deps --no-warn-conflicts --target $(python -m site --user-site) + shell: bash - name: Install other dependencies run: pip install -r requirements.txt + shell: bash - name: Build msyd run: pip install . + shell: bash