diff --git a/webknossos/poetry.lock b/webknossos/poetry.lock index d63e0f6bb..5400a3a78 100644 --- a/webknossos/poetry.lock +++ b/webknossos/poetry.lock @@ -312,7 +312,7 @@ optional = false python-versions = "*" [package.extras] -test = ["flake8 (==3.7.8)", "hypothesis (==3.55.3)"] +test = ["hypothesis (==3.55.3)", "flake8 (==3.7.8)"] [[package]] name = "cycler" @@ -692,8 +692,8 @@ python-versions = "*" typing-extensions = {version = "*", markers = "python_version < \"3.8\""} [package.extras] -docs = ["readthedocs-sphinx-ext", "sphinx", "sphinx-rtd-theme"] tests = ["pytest"] +docs = ["sphinx-rtd-theme", "sphinx", "readthedocs-sphinx-ext"] [[package]] name = "jsonschema" @@ -920,9 +920,9 @@ jsonschema = ">=3.0.0" six = "*" [package.extras] -isodate = ["isodate"] -rfc3339_validator = ["rfc3339-validator"] strict_rfc3339 = ["strict-rfc3339"] +rfc3339_validator = ["rfc3339-validator"] +isodate = ["isodate"] [[package]] name = "openapi-spec-validator" @@ -939,8 +939,8 @@ PyYAML = ">=5.1" six = "*" [package.extras] -dev = ["pre-commit"] requests = ["requests"] +dev = ["pre-commit"] [[package]] name = "packaging" @@ -1030,8 +1030,8 @@ python-versions = ">=3.6" importlib-metadata = {version = ">=0.12", markers = "python_version < \"3.8\""} [package.extras] -dev = ["pre-commit", "tox"] -testing = ["pytest", "pytest-benchmark"] +testing = ["pytest-benchmark", "pytest"] +dev = ["tox", "pre-commit"] [[package]] name = "pooch" @@ -1047,9 +1047,9 @@ packaging = ">=20.0" requests = ">=2.19.0" [package.extras] -progress = ["tqdm (>=4.41.0,<5.0.0)"] -sftp = ["paramiko (>=2.7.0)"] xxhash = ["xxhash (>=1.4.3)"] +sftp = ["paramiko (>=2.7.0)"] +progress = ["tqdm (>=4.41.0,<5.0.0)"] [[package]] name = "psutil" @@ -1418,10 +1418,10 @@ scipy = ">=1.1.0" threadpoolctl = ">=2.0.0" [package.extras] -benchmark = ["matplotlib (>=2.2.3)", "pandas (>=0.25.0)", "memory-profiler (>=0.57.0)"] -docs = ["matplotlib (>=2.2.3)", "scikit-image (>=0.14.5)", "pandas (>=0.25.0)", "seaborn (>=0.9.0)", "memory-profiler (>=0.57.0)", "sphinx (>=4.0.1)", "sphinx-gallery (>=0.7.0)", "numpydoc (>=1.0.0)", "Pillow (>=7.1.2)", "sphinx-prompt (>=1.3.0)", "sphinxext-opengraph (>=0.4.2)"] -examples = ["matplotlib (>=2.2.3)", "scikit-image (>=0.14.5)", "pandas (>=0.25.0)", "seaborn (>=0.9.0)"] -tests = ["matplotlib (>=2.2.3)", "scikit-image (>=0.14.5)", "pandas (>=0.25.0)", "pytest (>=5.0.1)", "pytest-cov (>=2.9.0)", "flake8 (>=3.8.2)", "black (>=21.6b0)", "mypy (>=0.770)", "pyamg (>=4.0.0)"] +tests = ["pyamg (>=4.0.0)", "mypy (>=0.770)", "black (>=21.6b0)", "flake8 (>=3.8.2)", "pytest-cov (>=2.9.0)", "pytest (>=5.0.1)", "pandas (>=0.25.0)", "scikit-image (>=0.14.5)", "matplotlib (>=2.2.3)"] +examples = ["seaborn (>=0.9.0)", "pandas (>=0.25.0)", "scikit-image (>=0.14.5)", "matplotlib (>=2.2.3)"] +docs = ["sphinxext-opengraph (>=0.4.2)", "sphinx-prompt (>=1.3.0)", "Pillow (>=7.1.2)", "numpydoc (>=1.0.0)", "sphinx-gallery (>=0.7.0)", "sphinx (>=4.0.1)", "memory-profiler (>=0.57.0)", "seaborn (>=0.9.0)", "pandas (>=0.25.0)", "scikit-image (>=0.14.5)", "matplotlib (>=2.2.3)"] +benchmark = ["memory-profiler (>=0.57.0)", "pandas (>=0.25.0)", "matplotlib (>=2.2.3)"] [[package]] name = "scipy" @@ -1567,10 +1567,10 @@ python-versions = ">=3.6" click = ">=7.1.1,<7.2.0" [package.extras] -test = ["pytest-xdist (>=1.32.0,<2.0.0)", "pytest-sugar (>=0.9.4,<0.10.0)", "mypy (==0.782)", "black (>=19.10b0,<20.0b0)", "isort (>=5.0.6,<6.0.0)", "shellingham (>=1.3.0,<2.0.0)", "pytest (>=4.4.0,<5.4.0)", "pytest-cov (>=2.10.0,<3.0.0)", "coverage (>=5.2,<6.0)"] -all = ["colorama (>=0.4.3,<0.5.0)", "shellingham (>=1.3.0,<2.0.0)"] -dev = ["autoflake (>=1.3.1,<2.0.0)", "flake8 (>=3.8.3,<4.0.0)"] -doc = ["mkdocs (>=1.1.2,<2.0.0)", "mkdocs-material (>=5.4.0,<6.0.0)", "markdown-include (>=0.5.1,<0.6.0)"] +test = ["isort (>=5.0.6,<6.0.0)", "black (>=19.10b0,<20.0b0)", "mypy (==0.782)", "pytest-sugar (>=0.9.4,<0.10.0)", "pytest-xdist (>=1.32.0,<2.0.0)", "coverage (>=5.2,<6.0)", "pytest-cov (>=2.10.0,<3.0.0)", "pytest (>=4.4.0,<5.4.0)", "shellingham (>=1.3.0,<2.0.0)"] +doc = ["markdown-include (>=0.5.1,<0.6.0)", "mkdocs-material (>=5.4.0,<6.0.0)", "mkdocs (>=1.1.2,<2.0.0)"] +dev = ["flake8 (>=3.8.3,<4.0.0)", "autoflake (>=1.3.1,<2.0.0)"] +all = ["shellingham (>=1.3.0,<2.0.0)", "colorama (>=0.4.3,<0.5.0)"] [[package]] name = "types-python-dateutil" @@ -1590,7 +1590,7 @@ python-versions = ">=3.7" [[package]] name = "universal-pathlib" -version = "0.0.18" +version = "0.0.19" description = "Pathlib API extended to use fsspec backends" category = "main" optional = false @@ -1600,7 +1600,7 @@ python-versions = ">=3.7" fsspec = "*" [package.extras] -test = ["aiohttp", "flake8", "gcsfs", "hadoop-test-cluster", "ipython", "jupyter", "moto", "pyarrow", "pylint", "pytest", "requests", "s3fs"] +test = ["aiohttp", "adlfs", "flake8", "gcsfs", "hadoop-test-cluster", "ipython", "jupyter", "moto", "pyarrow", "pylint", "pytest", "requests", "s3fs", "webdav4"] [[package]] name = "urllib3" @@ -1714,7 +1714,7 @@ tifffile = ["pims", "tifffile"] [metadata] lock-version = "1.1" python-versions = ">=3.7.1,<3.10" -content-hash = "b0edfbd355f9cad1c33e537b05fb42929b51590f8f83e31897893993a0b9f9da" +content-hash = "50bd1be018d41ac28384212a02351333fa8c30c3ff326e9dc11af3e46ec8744a" [metadata.files] aiobotocore = [ @@ -3099,8 +3099,8 @@ typing-extensions = [ {file = "typing_extensions-4.2.0.tar.gz", hash = "sha256:f1c24655a0da0d1b67f07e17a5e6b2a105894e6824b92096378bb3668ef02376"}, ] universal-pathlib = [ - {file = "universal_pathlib-0.0.18-py3-none-any.whl", hash = "sha256:ddaa3cbfd98d0aef0d018915d1787149b8a77da473ede4245ab0103d85b6784a"}, - {file = "universal_pathlib-0.0.18.tar.gz", hash = "sha256:b011f68611c1e9f839d86a76a154f3cd4fc17f4a9952cc43ddcd23e2080d74e0"}, + {file = "universal_pathlib-0.0.19-py3-none-any.whl", hash = "sha256:72df949935a12b7e6614481bb406df82383db52c58acba1bb44246762c76b127"}, + {file = "universal_pathlib-0.0.19.tar.gz", hash = "sha256:382a6de60565faf33c39d9791d8a5c453e39b88ed19e8982de9bbffd5930800c"}, ] urllib3 = [ {file = "urllib3-1.26.9-py2.py3-none-any.whl", hash = "sha256:44ece4d53fb1706f667c9bd1c648f5469a2ec925fcf3a776667042d645472c14"}, diff --git a/webknossos/pyproject.toml b/webknossos/pyproject.toml index 66586a80c..aeb8f3319 100644 --- a/webknossos/pyproject.toml +++ b/webknossos/pyproject.toml @@ -48,7 +48,7 @@ rich = "^10.9.0" scikit-image = "^0.18.3" scipy = "^1.4.0" typing-extensions = "^4.0" -universal-pathlib = "0.0.18" +universal-pathlib = "0.0.19" wkw = "1.1.16" zarr = "^2.11.0" zipp = "^3.5.0" diff --git a/wkcuber/poetry.lock b/wkcuber/poetry.lock index 77c5bce0f..213b56f15 100644 --- a/wkcuber/poetry.lock +++ b/wkcuber/poetry.lock @@ -282,7 +282,7 @@ optional = false python-versions = "*" [package.extras] -test = ["flake8 (==3.7.8)", "hypothesis (==3.55.3)"] +test = ["hypothesis (==3.55.3)", "flake8 (==3.7.8)"] [[package]] name = "cycler" @@ -816,8 +816,8 @@ python-versions = ">=3.6" importlib-metadata = {version = ">=0.12", markers = "python_version < \"3.8\""} [package.extras] -dev = ["pre-commit", "tox"] -testing = ["pytest", "pytest-benchmark"] +testing = ["pytest-benchmark", "pytest"] +dev = ["tox", "pre-commit"] [[package]] name = "psutil" @@ -1211,7 +1211,7 @@ python-versions = ">=3.7" [[package]] name = "universal-pathlib" -version = "0.0.18" +version = "0.0.19" description = "Pathlib API extended to use fsspec backends" category = "main" optional = false @@ -1221,7 +1221,7 @@ python-versions = ">=3.7" fsspec = "*" [package.extras] -test = ["aiohttp", "flake8", "gcsfs", "hadoop-test-cluster", "ipython", "jupyter", "moto", "pyarrow", "pylint", "pytest", "requests", "s3fs"] +test = ["aiohttp", "adlfs", "flake8", "gcsfs", "hadoop-test-cluster", "ipython", "jupyter", "moto", "pyarrow", "pylint", "pytest", "requests", "s3fs", "webdav4"] [[package]] name = "urllib3" @@ -1264,7 +1264,7 @@ rich = "^10.9.0" scikit-image = "^0.18.3" scipy = "^1.4.0" typing-extensions = "^4.0" -universal-pathlib = "0.0.18" +universal-pathlib = "0.0.19" wkw = "1.1.16" zarr = "^2.11.0" zipp = "^3.5.0" @@ -1358,7 +1358,7 @@ testing = ["pytest (>=6)", "pytest-checkdocs (>=2.4)", "pytest-flake8", "pytest- [metadata] lock-version = "1.1" python-versions = ">=3.7.1,<3.10" -content-hash = "12fe1b5f791339192132616b10c636bece39140038b36e693e263cad82d5f5cd" +content-hash = "8e9bf70193661a2ca7e2776d6a766f2dd34db31f1d81ee946f8b183ade865fe0" [metadata.files] aiobotocore = [ @@ -2454,8 +2454,8 @@ typing-extensions = [ {file = "typing_extensions-4.2.0.tar.gz", hash = "sha256:f1c24655a0da0d1b67f07e17a5e6b2a105894e6824b92096378bb3668ef02376"}, ] universal-pathlib = [ - {file = "universal_pathlib-0.0.18-py3-none-any.whl", hash = "sha256:ddaa3cbfd98d0aef0d018915d1787149b8a77da473ede4245ab0103d85b6784a"}, - {file = "universal_pathlib-0.0.18.tar.gz", hash = "sha256:b011f68611c1e9f839d86a76a154f3cd4fc17f4a9952cc43ddcd23e2080d74e0"}, + {file = "universal_pathlib-0.0.19-py3-none-any.whl", hash = "sha256:72df949935a12b7e6614481bb406df82383db52c58acba1bb44246762c76b127"}, + {file = "universal_pathlib-0.0.19.tar.gz", hash = "sha256:382a6de60565faf33c39d9791d8a5c453e39b88ed19e8982de9bbffd5930800c"}, ] urllib3 = [ {file = "urllib3-1.26.9-py2.py3-none-any.whl", hash = "sha256:44ece4d53fb1706f667c9bd1c648f5469a2ec925fcf3a776667042d645472c14"}, diff --git a/wkcuber/pyproject.toml b/wkcuber/pyproject.toml index 8ac5711dc..42d3d91f9 100644 --- a/wkcuber/pyproject.toml +++ b/wkcuber/pyproject.toml @@ -29,7 +29,7 @@ tifffile = "^2020.11.26" webknossos = { path = "../webknossos/", develop = true } wkw = "1.1.16" zarr = "^2.11.0" -universal-pathlib = "0.0.18" +universal-pathlib = "0.0.19" [tool.poetry.dev-dependencies] black = "22.3.0"