diff --git a/README.md b/README.md index 3e414764b..a1fea938a 100644 --- a/README.md +++ b/README.md @@ -18,6 +18,7 @@ Created with [Python3](https://www.python.org/). * `wkcuber.downsampling`: Create downsampled magnifications (with `median`, `mode` and linear interpolation modes). Downsampling compresses the new magnifications by default (disable via `--no-compress`). * `wkcuber.compress`: Compress WKW cubes for efficient file storage (especially useful for segmentation data) * `wkcuber.metadata`: Create (or refresh) metadata (with guessing of most parameters) +* `wkcuber.recubing`: Read existing WKW cubes in and write them again specifying the WKW file length. Useful when dataset was written e.g. with file length 1. * Most modules support multiprocessing ## Supported input formats @@ -77,6 +78,9 @@ python -m wkcuber.metadata --name great_dataset --scale 11.24,11.24,25 data/targ # Refresh metadata so that new layers and/or magnifications are picked up python -m wkcuber.metadata --refresh data/target + +# Recubing an existing dataset +python -m wkcuber.recubing --layer_name color --dtype uint8 /data/source/wkw /data/target ``` ### Parallelization