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DPL-472 - Brants Bridge sent root sample ids in incorrect format #556

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Jonnie-Bevan opened this issue Mar 31, 2022 · 0 comments
Open

DPL-472 - Brants Bridge sent root sample ids in incorrect format #556

Jonnie-Bevan opened this issue Mar 31, 2022 · 0 comments
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Data integrity data fix Enhancement New feature or request GSU Delivers work for the GSU unit Heron RVI RVI Project

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@Jonnie-Bevan
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A data fix requested by PAM, fifth priority from #533.

Description
Plate with barcode 95040456002133259 had non-clinical samples and duplicated samples. Ideally we should remove or mark as deprecated/obsolute these samples according to plate map sent to Tom W, Stuart M and Andrew S on 31/03/22.
This should be done in the MLWH database (lighthouse_sample table). They should also be dealt with in the MongoDB and any other databases/tables they may appear in (the MLWH sample table, SequenceScape, Events Warehouse).
There is a chance these samples were picked and sequenced, and if so it may be needed to get NPG involved.

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Alan K
@Jonnie-Bevan Jonnie-Bevan added Enhancement New feature or request Data integrity data fix labels Mar 31, 2022
@Jonnie-Bevan Jonnie-Bevan mentioned this issue Mar 31, 2022
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@sdjmchattie sdjmchattie changed the title DPL-nnn - 5: Brants Bridge sent root sample ids in incorrect format DPL-472 - Brants Bridge sent root sample ids in incorrect format Aug 24, 2022
@andrewsparkes andrewsparkes added the RVI RVI Project label Sep 7, 2022
@TWJW-SANGER TWJW-SANGER added the GSU Delivers work for the GSU unit label Sep 28, 2022
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Data integrity data fix Enhancement New feature or request GSU Delivers work for the GSU unit Heron RVI RVI Project
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@stevieing @andrewsparkes @Jonnie-Bevan @TWJW-SANGER