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Add omnipath information to the plots
R-CMD-check-bioc #105: Commit 9412a5a pushed by browaeysrobin
February 26, 2024 15:16 47m 32s dev-branch
February 26, 2024 15:16 47m 32s
fix filtering prior to findMarkers DE
R-CMD-check-bioc #104: Commit 02294de pushed by browaeysrobin
February 14, 2024 13:39 32m 16s dev-branch
February 14, 2024 13:39 32m 16s
fix dev vignette
R-CMD-check-bioc #103: Commit 783c11b pushed by browaeysrobin
January 26, 2024 09:46 43m 14s dev-branch
January 26, 2024 09:46 43m 14s
change expression filtering (>= instead of >)
R-CMD-check-bioc #102: Commit 12e4278 pushed by browaeysrobin
January 22, 2024 12:15 57m 31s dev-branch
January 22, 2024 12:15 57m 31s
add new plotting functionality to visualize group fraction of cells e…
R-CMD-check-bioc #101: Commit d97312a pushed by browaeysrobin
December 1, 2023 14:22 1h 6m 15s dev-branch
December 1, 2023 14:22 1h 6m 15s
Fix issue:
R-CMD-check-bioc #100: Commit 72f1198 pushed by browaeysrobin
November 14, 2023 13:55 38m 17s dev-branch
November 14, 2023 13:55 38m 17s
fix unit test script
R-CMD-check-bioc #99: Commit 9180052 pushed by browaeysrobin
November 10, 2023 20:32 36m 27s dev-branch
November 10, 2023 20:32 36m 27s
Fix friday night bugs
R-CMD-check-bioc #98: Commit 32422c6 pushed by browaeysrobin
November 10, 2023 20:31 21m 29s dev-branch
November 10, 2023 20:31 21m 29s
Fix bug abundance_info
R-CMD-check-bioc #97: Commit b23b735 pushed by browaeysrobin
November 10, 2023 19:41 14m 57s dev-branch
November 10, 2023 19:41 14m 57s
Make "cut": expression filtering of genes only based on fraction of c…
R-CMD-check-bioc #96: Commit 6ee0752 pushed by browaeysrobin
November 10, 2023 19:11 22m 50s dev-branch
November 10, 2023 19:11 22m 50s
Make make_output_lite function for condition-specific cell type workf…
R-CMD-check-bioc #95: Commit e7ecf8e pushed by browaeysrobin
November 9, 2023 10:17 43m 6s dev-branch
November 9, 2023 10:17 43m 6s
Workflow for condition-specific cell types
R-CMD-check-bioc #94: Commit 9b0999c pushed by browaeysrobin
November 8, 2023 14:04 41m 20s dev-branch
November 8, 2023 14:04 41m 20s
Fix some issues, add beta-version new parallelized version ligand act…
R-CMD-check-bioc #93: Commit 79a8e5d pushed by browaeysrobin
October 27, 2023 15:08 23m 19s dev-branch
October 27, 2023 15:08 23m 19s
Split up code intercellular regulatory network and fix visualization bug
R-CMD-check-bioc #92: Commit b308677 pushed by browaeysrobin
October 20, 2023 15:11 14m 36s dev-branch
October 20, 2023 15:11 14m 36s
Code clean-up and simplification. Add cell-type specificity plot to t…
R-CMD-check-bioc #91: Commit aa3cb5f pushed by browaeysrobin
October 20, 2023 09:27 16m 49s dev-branch
October 20, 2023 09:27 16m 49s
fix bug typo usage documentation
R-CMD-check-bioc #90: Commit 8b10342 pushed by browaeysrobin
October 19, 2023 15:45 33m 9s dev-branch
October 19, 2023 15:45 33m 9s
Start v2 changes for paper revision
R-CMD-check-bioc #89: Commit 3a52864 pushed by browaeysrobin
October 19, 2023 15:34 14m 5s dev-branch
October 19, 2023 15:34 14m 5s
add option to only include upregulatory ligand activities
R-CMD-check-bioc #88: Commit 3549fd8 pushed by browaeysrobin
September 26, 2023 10:08 58m 28s main
September 26, 2023 10:08 58m 28s
Fix bug in case more than one covariate
R-CMD-check-bioc #87: Commit 411e2a7 pushed by browaeysrobin
September 12, 2023 13:34 54m 29s main
September 12, 2023 13:34 54m 29s
fix bug wrapper function, add unit tests for edge cases, MNN version …
R-CMD-check-bioc #86: Commit 9d554fb pushed by browaeysrobin
August 29, 2023 13:17 1h 14m 21s main
August 29, 2023 13:17 1h 14m 21s
Extend fix_frq_df
R-CMD-check-bioc #85: Commit 22cdbec pushed by browaeysrobin
August 22, 2023 19:34 52m 41s main
August 22, 2023 19:34 52m 41s
v1.0.2
R-CMD-check-bioc #84: Commit be148c1 pushed by browaeysrobin
August 22, 2023 05:29 1h 2m 31s main
August 22, 2023 05:29 1h 2m 31s
fix previous commit
R-CMD-check-bioc #83: Commit d7c7ae8 pushed by browaeysrobin
August 21, 2023 15:59 44m 42s main
August 21, 2023 15:59 44m 42s
fix bug make_lite (cor)
R-CMD-check-bioc #82: Commit e639127 pushed by browaeysrobin
August 21, 2023 15:22 25m 44s main
August 21, 2023 15:22 25m 44s
Fix bug make_lite_output in case correlation table is NULL because to…
R-CMD-check-bioc #81: Commit c242b52 pushed by browaeysrobin
August 18, 2023 08:22 41m 19s main
August 18, 2023 08:22 41m 19s