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This is a repository for the analysis of bulk RNA seq from AA and UA mice. All cells were flow sorted CD4+ before sequencing, and contain effector, naive, and regulatory cell types.
Analysis reveals that AA and UA samples are seperable via PC1, and DEG reveals a number of genes upregulated and statistically significant between the samples.
Watch out for a publication soon to learn more about the role of CD4+ T cells in a mouse model of alopecia areata!