Releases: ropensci/beastier
Releases · ropensci/beastier
v2.0.24
NEW FEATURES
- None
MINOR IMPROVEMENTS
- Do not check if
beast2_path
still/already exists incheck_beast2_options
BUG FIXES
- None
DEPRECATED AND DEFUNCT
- None
v2.0.23
beastier 2.0.23 (2019-09-29)
NEW FEATURES
- Use BEAST2 main class name when calling the jar file,
to fix the 'no main manifest attribute' error
MINOR IMPROVEMENTS
- None
BUG FIXES
- None
DEPRECATED AND DEFUNCT
- None
v2.0.21
NEW FEATURES
- None
MINOR IMPROVEMENTS
create_beast2_options
checks that the filenames are not in the same
folder as the BEAST2 working directory
BUG FIXES
- None
DEPRECATED AND DEFUNCT
- None
v2.0.20
NEW FEATURES
- None
MINOR IMPROVEMENTS
- Added
get_beast2_options_filenames
to obtain the filenames in a
beast2_options
BUG FIXES
- None
DEPRECATED AND DEFUNCT
- None
v2.0.19
NEW FEATURES
- None
MINOR IMPROVEMENTS
check_beast2_options
checks for duplicate filenames
BUG FIXES
- None
DEPRECATED AND DEFUNCT
- None
v2.0.18
NEW FEATURES
- Install BEAST2
v2.6.0
, instead ofv2.5.2
MINOR IMPROVEMENTS
- Can create files in sub-sub-subfolders
- Builds on Travis CI distribution 'Bionic'
- Add
are_identical_alignments
- Add
is_alignment
BUG FIXES
- RNG seed is checked to be a whole number (Issue #35, thanks @thijsjanzen)
DEPRECATED AND DEFUNCT
- None
v2.0.15
- Simplified
run_beast2
- Improved error checking and logging in
run_beast2
- Will overwrite files if requested (which is by default)
- Removed example code that assumed all Linuxes have
/home/username
,
thanks to Brian Ripley
v2.0.14
- Add
SystemRequirements
field toDESCRIPTION
v2.0.13
NEW FEATURES
- Install BEAST2
v2.5.2
, instead ofv2.5.1
- Can call
run_beast2
/run_beast2_from_options
in parallel
MINOR IMPROVEMENTS
- None
BUG FIXES
- None
DEPRECATED AND DEFUNCT
- None
v2.0.12
- Package builds successfully without BEAST2 installed