Removed makeNGSfilter
because it was causing problems.
Added function readColony
which extracts data from a Colony project.
Expanded the functionality of readClumpp
function to read consecutive individual number and population designation.
Fixed bug in window size, genindSlidingWindow now also prints cohort dates. Printing can be disabled through argument verbose
.
Added function writeCoancestry
and goSlide
.
Added function genindSlidingWindow
.
Enhanced writeGenPop function. It now accepts lists. Each list element (genind object) is written as its own population. Added function for calculating Garza-Williamson M-ratio.
Added function writeGenPop. This function differs from writeGenePop in that it uses strata/pop functionality of genind objects.
Added functions subsetGenData, writeINEST, drawLoci and findIntegerInterval.
Added functions readClumpp
, writeStructure
and writeGenePop
.