Basic PyDSTool functions appear to be broken on my system

[jckegelman]

Hello. I just installed PyDSTool from git (9c7ab72) and am having trouble running the tests inside the examples directory. I get the following output:

Test scripts that failed:
	ModelSpec_test.py
	HH_model_testbounds.py
	IF_delaynet.py
	PyCont_Hopfield.py
	PyCont_LevelCurve.py
	PyCont_Logistic.py
	IF_delaynet_syn.py
	CIN.py
	freefinger_noforce_radau.py
	sloppycell_example.py
Summary:
Basic PyDSTool functions: appears to be broken on your system
Map related modules: appears to work on your system
VODE related modules: appears to be broken on your system
Symbolic differentiation module: appears to work on your system
Parameter estimation module: appears to work on your system
PyCont: appears to be broken on your system
Dopri ODE systems: appears to be broken on your system
Radau ODE systems: appears to be broken on your system
Parameter estimation module with external compilers: appears to work on your system
PyCont interface to AUTO: appears to work on your system

A few of the tests (including ModelSpec_test.py) failed with the same error:

 File "/home/kegelman/repos/pydstool/PyDSTool/Generator/baseclasses.py", line 720, in _kw_process_xdomain
    if v[0] >= v[1]:
TypeError: unorderable types: QuantSpec() >= QuantSpec()

I am running Ubuntu 16.04 with Python 3.5.2 installed via Anaconda 4.2.0 (64-bit). I saw #119 but the troubleshooting there seemed to focus on gfortran which is working for me (at least the Hello World! example that was given).

Any help would be greatly appreciated, thanks!

[jckegelman]

Seems to be related to Python 3.5. Switching to Python 3.4 got the basic PyDSTool functions to work.

Running run_all_tests.py with Python 3.4 gave the following:

Test scripts that failed:
	PyCont_Hopfield.py
	PyCont_Logistic.py
	freefinger_noforce_radau.py
	sloppycell_example.py
Summary:
Basic PyDSTool functions: appears to work on your system
Map related modules: appears to work on your system
VODE related modules: appears to work on your system
Symbolic differentiation module: appears to work on your system
Parameter estimation module: appears to work on your system
PyCont: appears to be broken on your system
Dopri ODE systems: appears to work on your system
Radau ODE systems: appears to be broken on your system
Parameter estimation module with external compilers: appears to work on your system
PyCont interface to AUTO: appears to work on your system

which seem to be known issues (#21 and #101 )

[z2v]

Duplicates #101