README.md

lnsc-cell-browser

Adding a new publication

• Add a new entry to pubs.yml, the only information needed for the entry is the pubmed URL which is added as the "pubmed" field
• Optional links can also be added under the "links" field, this includes "github", "atlas", and "geo"
• Run pre-build.R to scrape the remaining information for the publication and to update authors.yml
• Rebuild site

Adding a new cell atlas

• Add the atlas link to the associated publication listed in pubs.yml
• Rebuild site

Adding a new project

• Add project information to projects.yml
• Required fields include, "title", "short", "hypothesis", and "abstract"
• An optional image can also be included
• Edit authors.yml to add authors to the new project
• Run pre-build.R to automatically associate publications with the new project
• Rebuild site

Building site

• Remove directories from previous build (_site, .quarto)
• Run pre-build.R and commit changes
• Render site