R-CMD-check.yaml

on:
  push:
    branches:
      - develop
      - master
  pull_request:
    branches:
      - develop
      - master

name: R-CMD-check

jobs:
  R-CMD-check:
    runs-on: ${{ matrix.config.os }}

    name: ${{ matrix.config.os-name }}, R ${{ matrix.config.r }}, Java ${{ matrix.config.java }}

    strategy:
      fail-fast: false
      matrix:
        config:
          - {os: windows-latest, r: 'release', java: 12, os-name: windows}
          - {os: windows-latest, r: 'devel', java: 12, os-name: windows}
          #- {os: windows-latest, r: 'oldrel', java: 12, os-name: windows}
          - {os: macOS-latest, r: 'release', java: 13, os-name: macos}
          - {os: macOS-latest, r: 'devel', java: 17, os-name: macos}
          #- {os: macOS-latest, r: 'oldrel', java: 12, os-name: macos}
          - {os: windows-latest, r: 'devel', java: 17, os-name: windows}
          #- {os: ubuntu-20.04, r: 'release', java: 12,os-name: ubuntu}
          #- {os: ubuntu-20.04, r: 'devel', java: 12,os-name: ubuntu}
          #- {os: ubuntu-20.04, r: 'release', java: 16,os-name: ubuntu}

    steps:
      - uses: actions/checkout@v2

      - uses: actions/setup-java@v4
        with:
          distribution: 'zulu'
          java-version: ${{ matrix.config.java }}

      - uses: r-lib/actions/setup-r@v2
        with:
          r-version: ${{ matrix.config.r }}

      - name: Info
        run: "bash -c 'java -version && which java && echo $PATH && echo $JAVA_HOME'"

      - name: Setup R Java support
        if: runner.os != 'Windows'
        run: "echo export PATH=$PATH > reconf.sh; echo export JAVA_HOME=$JAVA_HOME >> reconf.sh; echo R CMD javareconf >> reconf.sh; sudo bash reconf.sh"

      - name: print effective R version
        run: version
        shell: Rscript {0}

      - uses: r-lib/actions/setup-pandoc@v2

      - name: Query dependencies
        run: |
          install.packages('remotes')
          saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2)
          writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version")
        shell: Rscript {0}

      - name: Restore R package cache
        uses: actions/cache@v2
        with:
          path: ${{ env.R_LIBS_USER }}
          key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }}
          restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-

      - name: Install system dependencies
        if: runner.os == 'Linux'
        run: |
          while read -r cmd
          do
            eval sudo $cmd
          done < <(Rscript -e 'writeLines(remotes::system_requirements("ubuntu", "20.04"))')

      - name: Install dependencies
        run: |
          remotes::install_deps(dependencies = TRUE)
          remotes::install_cran("rcmdcheck")
        shell: Rscript {0}

      - name: Check
        env:
          _R_CHECK_CRAN_INCOMING_REMOTE_: false
        run: |
          options(crayon.enabled = TRUE)
          rcmdcheck::rcmdcheck(args = c("--no-manual", "--as-cran", "--no-multiarch", "--run-donttest"), error_on = "warning", check_dir = "check")
        shell: Rscript {0}

      - name: Upload check results
        if: failure()
        uses: actions/upload-artifact@main
        with:
          name: ${{ runner.os }}-r${{ matrix.config.r }}-results
          path: check