CHANGES.md

For a list of open issues and known problems, see https://github.com/radical-cybertools/radical.utils/issues/

1.83.0 Release 2024-10-15

• remove an obsolete monkeypatch

1.82.0 Release 2024-10-01

• ensure version_detail is not None

1.81.0 Release 2024-09-03

• fix zmq log levels
• simplify log switching for zmq

1.62.0 Release 2024-08-20

• add complete ru zmq examples
• apply blacklist

1.61.0 Release 2024-07-01

• updated expr usage for env funcs extraction
• flux startup updates
• use uid for flux log names

1.60.0 Release 2024-05-10

• added CODECOV_TOKEN (CI)
• allow launcher command for flux startup
• implement custom (de)serialization for json and msgpack
• typed dict classes should have from_dict as default arg
• make typed dicts json (de)serializable
• remove leading v from version string
• simplify deployment
• speed up test

1.52.0 Release 2024-04-15

• fix for setuptools upgrade

1.48.0 Release 2024-03-24

• add flux module path
• dragon does not like lambdas
• dump flux resources after startup

1.47.0 Release 2024-02-08

• clean some log messages
• doc string fix

1.46.0 Release 2024-01-11

• pypi fix

1.44.0 Release 2024-01-10

• fix flux startup

1.43.0 Release 2023-12-04

• disable reporter by default
• enable/disable reporter on construction

1.42.0 Release 2023-10-27

• fix for amarel betwork setup
• updated handling of directory with user-defined configs

1.41.0 Release 2023-10-17

• fix RTD
• add message base class
• add ifaddress to prioritize net interface for Frontier
• ensure path is used by registry
• keep profiling ON by default
• create fewer logfiles
• reduce log load
• no config files for zmq bridges
• remove deprecated option for ReadTheDocs config
• remove mongodb helpers
• remove obsolete mongo-related module

1.33.0 Release 2023-04-25

• avoid printf on functions

1.22.0 Release 2023-03-22

• clean up RST doctree.
• fix deprecated import statement and inspect call
• nicer and more informative warning on logging import order
• support pickle/unpickle for typed dicts

1.21.0 Release 2023-02-01

• remove a high-requency debug message

1.20.1 Hotfix Release 2023-01-03

• fix registry key insertion on path overwrite

1.20.0 Release 2022-12-16

• bump python test env to 3.7
• cfg update
• default value for debug level
• fixed error related to default value None
• fix sphinx errors / warnings
• format fix
• lint the linter
• make logger debug level inspectable
• newer sphinx
• recover logging.Logger inheritance
• speed up logger
• switch to requirements files to make RTD happy

1.18.1 Hotfix Release 2022-10-20

• fix shell quoting

1.18.0 Release 2022-10-11

• add zmq pipe implementation

1.17.0 Release 2022-09-15

• doc strings
• fix double subscription on Subscribers which hold global zmq sockets
• fix pubsub logging, consistent variable names, shorter timeout
• fix ratio interpretation for bisect
• make bridge silent by default
• simpler server address inspection

1.16.0 Release 2022-08-15

• silence profile reading

1.15.0 Release 2022-07-29

• fixed error with "too many open files" regarding config loads
• fix queue pull wait time

1.14.0 Release 2022-04-13

• added tests for modules module
• move some methods from RP.utils
• remove duplicated funcs from debug module and keep them in modules
• removed RG from the dependencies (RG is required for RP)
• silence chatty debug logs

1.13.0 Release 2022-03-21

• clean temporary setup files
• fix server protocol string types

1.12.0 Release 2022-02-28

• add initialization command for conda
• ZMQServer/ZMQClient classes
• add sh_quote()
• introduced TypedDict module (Munch-successor)

1.11.1 Hotfix Release 2022-02-17

• fix env setup

1.11.0 Release 2022-01-19

• sync release versions

1.9.1 Hotfix Release 2021-11-23

• constrain mongodb version dependency

1.9.0 Release 2021-11-23

• fixed tarfile method name
• generic deactivate
• pylint fixes, wrap open for utf8 encoding

1.8.4 Hotfix Release 2021-11-03

• fix env handling on old BASH versions (Stampede2)

1.8.2 Hotfix Release 2021-09-24

• ensure var initialization

1.8.1 Hotfix Release 2021-09-24

• add missing import

1.8.0 Release 2021-09-23

• add debug_1, debug_2 etc as additional log levels
• socket cleanup for ZMQ connections
• add ZMQ registry class with dict interface
• added test for zmq.client and applied corresponding fixes
• add type annotations
• support for task env isolation
• damonize server threads
• disabled os.setsid in ru.daemonize
• improved flux integration (flux executor API)
• reconnect to external flux instances
• cleanup and fix host helper methods

1.6.7 Release 2021-07-08

• add failure list to bisect return values
• clean dependencies
• created new module host, which will contain host-related functions
• fix flux module handling
• fix msg unpack
• enforce python3 shebang in scripts

1.6.6 Release 2021-05-18

• fixed method get_hostname
• handling encoded str for mongodb password

1.6.5 Release 2021-04-14

• improvements to environment isolation
• allow None as munch default
• improve bulk communication on queues
• separate queue name spaces on same comm channel / bridge
• more tests
• multiple namespaces to load plugins from
• separate pre_exec and pre_exec_cached
• write cfg file in bridge base class
• add zmq server and client classes
• add flux helper service

1.6.2 Hotfix Release 2021-03-26

• switch to pep-440 for sdist and wheel versioning, to keep pip happy

1.6.0 Release 2021-03-09

• add munch inheritance
• reduce heartbeat log verbosity

1.5.12 Release 2021-02-02

• make profiler fork-save

1.5.9 Release 2021-01-18

• test additions and fixes
• add python path to stack info
• tools for environment capture, merge and setup (py and sh)
• fix config-munchification
• Fix profiler data flushing
• get lockfile owner
• github actions for radical.utils
• generic version of get_radical_base for arbitrary name spaces
• move locking mechanism to symlinks
• remove verbose option from radical-stack

1.5.8 Release 2020-11-23

• plugin manager fixes
• test cleanup

1.5.7 Release 2020-10-30

• added method fcntl.lockf in case of exception for fcntl.flock
• extend demunching for ru.Munch
• implement unit test for profile enable / disable
• less profiles on zmq
• line buffering is not multiprocess-safe for high-frequency writes
• reduce profiler noise
• support "%(rank)d" for ru.ids
• updates related to pylint/flake8 and cleanup

1.5.4 Release 2020-09-14

• fixed ru.munch.update and ru.munch.deepcopy
• uniform handling of munch schema and defaults

1.5.3 Hotfix Release 2020-08-14

• fix recursive munch initialization

1.5.2 Hotfix Release 2020-08-05

• fix dict inheritance

1.5.1 Release 2020-08-05

• add default config
• config inheritance
• munch implementation / improvements / type checking
• add several tests
• depend on radical.gtod
• documentation
• implement metric_expand
• line buffering is now multiprocess-safe for high-frequency writes
• revert to exec, capture stdio, exceptions
• travis- and pylint-related updates
• apply exception chaining
• sets min python version to 3.6

1.4.0 Release 2020-05-12

• merge #230: test update
• merge #232: documentation fix
• merge #233: pep8
• merge #234: improve test coverage
• merge #235: configurable csv field size limit
• add lock unregister
• clarify cb semantics
• force flush on json write
• make bulk logger usable for tests
• profiling fix
• fix queue debug verbosity
• terminate listerer on unsubscribe
• travis timeout fix

1.3.1 Release 2020-04-14

• fix listener termination for Queue getter

1.3.0 Release 2020-04-10

• improve unit testing

1.2.2 Hotfix Release 2020-03-22

• fix atfork default setting

1.2.1 Hotfix Release 2020-03-22

• fix: clean ZMQ subscriber and listener threads after fork
• fix: re-enable atfork handlers for os.fork, logging, singleton by default
• PR #216 fix to_tuple
• PR #217 add time simulation class
• PR #218 change ZMQ bulking defaults
• PR #225 add noop() as cb default value
• remove deprecated signals
• reduce log chattiness
• simplify bridge construction

1.2.0 Release 2020-03-07

• add time simulation class
• Travis fix
• silence some debug messages

1.1.1 Hotfix Release 2020-02-11

• resolve merge mistake

1.1 Release 2020-02-11

• fast description base class
• revert to shell based gtod again
• pylint / flake fixes
• add verbosity option to radical-stack(#192)
• apply exception chaining (#23)
• speed up uid generation
• update README

1.0.0 Release 2019-12-24

• convert to Python3
• drop support for RU processes and threads
• improve thread lock debugging
• add a mktar method
• add daemonization API
• add heartbeat management API
• move ZMQ support from RP to RU
• implement a lazy_bisect algorithm
• implement generic code importer (for RX alg extraction)
• implement progress bar for reporter
• testing, flaking, linting and travis improvements

0.90.3 Hotfix 2019-09-06

• string byteification

0.90.2 Hotfix 2019-09-06

• fix radical-stack inspection

0.90.1 Alpha-release 2019-08-25

• Move to Python-3

0.72.0 Release 2019-09-11

• change lockfile API to sync mt.Lock
• add lockfile support
• add sh json parser for bootstrappers
• fix ns guessing, radical.base
• make sure that heartbeat termination is logged
• move rec_makedir from rp
• fix #171
• resilience against incomplete prof eevents
• return default local IP if host is not connected
• gtod deployment fix

0.70.1 Hotfix 2019-08-19

• fix logger namespace default

0.70.0 Release 2019-07-07

• extend expand_env to dicts and sequences
• simplify radical-stack inspection

0.62.0 Hotfix 2019-06-08

• improve radical stack inspection

0.60.2 Hotfix 2019-05-28

• delay env expansion for configs

0.60.1 Hotfix 2019-04-12

• fallback to time.time() on failing gtod compile

0.60.0 Release 2019-04-10

• fir network interface blacklisting
• add pep8 and pylint configs
• add expand_env
• fix ReString class
• add heartbeat class
• add shell level proc watcher
• add stdio redirect for background callouts
• add zmq support, backported from v2
• add gtod support
• dict mixin cleanup
• clean out stale code
• consolidate configuration system across RCT stack
• fix config error handling and test
• fix config getter
• fix env expansion, apply in config patrser
• fix path interpretation
• fix state event duplicaation
• fix setup and test suite
• improve scheduler viz
• increase timing precision in profiler
• impove shell process mgmt
• more resilient mod loading
• move configuration tooling to util layer
• remove some debug prints
• switch to pytest
• use dict mixin for config

0.50.3 Release 2018-12-19

• fix msg evaluation in process watcher (#149)
• update setup.py (#146)
• a bitarray based scheduler
• use config files for bitarray scheduler configuration
• add install info for macos
• adding git-error in version check (#145)
• fix div-by-zero on fast runs
• handle None messages in watcher (#141)

0.50.2 Release 2018-08-20

• fix profile cleanup to work w/o state models

0.50.1 Release 2018-07-03

• fix relocation ID state storage
• fix issue RS-661
• support dynamic code snippet injection
• avoid mkdir race
• expand exe excution logic from RP
• fix array test
• uniform env getter for radical namespace

0.47.5 Release 2018-06-02

• fix and cleanup log, prof and rep settings

0.47.4 Release 2018-03-27

• fix RA issue #65

0.47.3 Release 2018-03-20

• more thorough approach to relocate ID state storage (#131)
• travis badge

0.47.2 Release 2018-02-28

• relocate ID state storage (#131)

0.47.1 Release 2018-02-21

• introduce name spaces for the ID generator
• iterate on some of the debug methods

0.46.2 Release 2017-11-19

• backport of profile handle checks
• add tid arg to prof
• add support for legacy profiles
• clean profile handle check
• add shell callout helper
• function stack recognizes anaconda virtual envs
• reduce profile buffering
• fixes issue #120
• add comments on profil format
• fix #RA-52
• relax time limits on process / thread creation
• radical-stack-clone supports Conda Envs Now!! :)
• add -p to specify python executable to stack-clone
• add a get_size() debug method
• cooperative process termination
• make ID generator behave under docker
• move gettid to where it belongs
• add close() method to logger
• expand poller lock scope
• remove some debug prints
• support changes in RA
• improve runtime behavior of concurrency calculation

0.46.2 Release 2017-08-23

• hotfix for RP #1415

0.46.1 Release 2017-08-23

• hotfix for RP #1415

Version 0.46 release 2017-08-11

• Feature/managed process (#104)
• Feature/poll (#106)
• Fix/version strings (#107)
• Revert "Feature/managed process" (#102)
• add a managed process class
• add close() method to logger
• add some doc on raise_in_thread()
• apply ru.Process syntax/semantics to ru.Thread
• be friendly to MacOS
• clean out and comment on utils thread wrapper
• cleanup on ru Process class, tests
• fix logging, leave parent termination alone
• fix process termination test case
• fix raise_on messaging and eval; work on cancellation (#101)
• fix thread locality, logging
• fuck python
• get stack info and clone in sync
• improve error reporting on child processes
• iterate and complete documentation;
• iteration on reliable process management
• make a sanity check non-fatal
• make sure that thread local data are accessible
• move gettid to where it belongs
• proper handling of null logger
• remove potential filename collission in test suite
• rename ru.Thread to ru.Future (#95)
• remove some debug prints/logs, add assert
• simplify radical-stack, make programmatic
• support for cprofile in ru.Thread
• rename ru.Thread to ru.Future

Version 0.45 release 2017-02-28

• add radical-stack, radical-stack-clone tools
• setup fix
• silence a warning
• Silence empty profile warning

Version 0.44 release 2016-11-01

• remote debugging!
• SIGINT is nono in threads
• comment on exception types in raise_in_thread
• add range matching alg
• add condition watcher
• add some tracing methods
• add get_thread_name and get_thread_id
• add raise_in_thread
• add netifaces dep
• hardcode the netiface version until it is fixed upstream.
• allow to overwrite profiler name
• fix double releases
• convert atfork monkeypatch exception into warning
• make singleton fork-safe
• move get_hostip and get_hostname to ru
• move profiler from RP to RU
• move raise_on functionality from rpu to ru, to support random error triggers for stress testing
• make raise_on thread save, get limits from env

Version 0.41.1 release 2016-06-02

• add fs barrier to debug helper
• add get_traceback
• clean up counter management
• fix a log handler
• fix path creation for logfile output
• Fix regression on query split.
• fix thread inspection problem
• include atfork in RU
• keep doc in sync with implementation
• log version info is now optional
• make sig checking conditional
• make sure log level is string before calling "upper()"
• fix split_module
• monkeypatch python's logging module

Version 0.40 release 2016-02-03

• add an algorithm to create balanced partitions of a space
• add ssl support to mongodb_connect
• allow fragment parsing in Url class
• allow reporter and debug log to coexist if log target is set.
• fix default for get in dict mixin
• fix type conversion for int, float configurables from env vars
• implement reset_id_counters

Version 0.38 release 2015-11-06

• support install on anaconda

Version 0.37 release 2015-10-15

• fix reporter log level
• several changes to reporter class
• align reporter, logger, and logreporter

Version 0.36 release 2015-10-08

• clean up logging (getLogger -> get_logger)
• log pid and tid on log creation
• fix type conversion on some config data types
• make uid generation independent if getpwuid
• fix log message for warning about log level
• add boolean test for url
• add SAGA_VERBOSE backport
• fix some more import shadowing
• fix layer violation: make logs look nice in RP, finally
• do not use signals in threads...
• rename and install version tool.
• fix the debug helper

Version 0.35 release 2015-08-27

• small bugfix release

Version 0.29 release 2015-07-13

• attempt to avoid sdist naming error during pypi installation
• add uuid support, avoid counter reset on reboot
• add two convenience methods which support range finding
• have multiple threads lease from same pool. Speed up LM test
• make sure that the pull is filled during lease manager testing
• make sure json is exported as encoded unicode
• make sure we write encoded strings for json
• add test for LeaseManager

Version 0.28 release 2015-04-16

• minimize an unlock/release race
• resilience against missing git in setup.py
• cleaner version string
• sync setup.py with recent changes in RP
• export range collapsing algorithm
• fix documentation
• fix reporting of type checks when multiple types are valid and optional; fix URL init sig
• fix url tests
• install sdist, export sdist location
• tool rename
• add version tool

Version 0.8 release 2015-02-24

• Preserve case for "hostnames" in GO URIs.
• Allow # in host part of Globus Online URIs.
• preserve trailing slashes on URL paths
• move sources into src/
• fix version strings. again.
• fix id counters to start from 0
• fix comment parsing fix in second json read

Version 0.7.11 release 2014-12-11

• fixed botched merge from devel

Version 0.7.10 release 2014-12-11

• fixed lease manager debug output

Version 0.7.9 release 2014-12-02

• fix to json comment parsing
• att flexible pylint util
• support append / overwrite mode for log targets
• add daemonize class
• fix leaking logs
• reduce lease manager logging noise
• log python version on startup
• add reporter class for nice demo output etc
• add namespace for object_cache, backward compatible
• fix bson/json/timestamp mangling
• json support for json writing

Version 0.7.8 release 2014-10-29

• implemented lease manager (manage finite set of resources with finite lifetime over multiple threads)
• implemented DebugHelper class (prints stack traces for all threads on SIGUSR1
• implement decorator for class method timings
• cache configuration settings on logger creation, which significantly speeds up logging over different log objects
• remove deepcopy from configuration management (improves performance)
• add wildcard expanstion on dict_merge
• make pymongo and nose dependencies optional

Version 0.7.7 release 2014-08-27

• lease manager which handles resource leases (like, leases ssh connections to saga adaptors)
• fixes on deepcopy, logging and config handling

Version 0.7.5 release 2014-07-22

• Some small bug fixes.

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