diff --git a/README.md b/README.md index f465263..b696a54 100644 --- a/README.md +++ b/README.md @@ -133,12 +133,18 @@ sudo apt install r-base Before installing QuaTraDIS via conda, first [install conda](https://docs.conda.io/projects/conda/en/latest/user-guide/install/linux.html) and enable the bioconda channel as described [here](https://bioconda.github.io/). After which if you -don't have mamba installed then we recommend you do this to make the installation process much faster. +don't have mamba installed then we recommend you do this to make the installation process much faster. +We also recommend using a virtual environment with python pinned to 3.10. Rough steps are described here (adapt as needed for your system): ```bash # We assume you already have conda installed with bioconda channel setup. See comments above for details. +# Create a virtual environment for quatradis and activate it. You'll need to reactivate it in every session +# in which you wish to use quatradis. +conda create -n "quatradis" python=3.10-9 +conda activate quatradis + # Install mamba if you haven't already conda install -c conda-forge mamba @@ -382,4 +388,4 @@ QuaTraDIS is built on top of the work done in BioTraDIS and AlbaTraDIS: ## Citation -The QuaTraDIS academic paper is currently work in progress. For now please cite the references above. \ No newline at end of file +The QuaTraDIS academic paper is currently work in progress. For now please cite the references above.