test.yml

name: Run Tests

on:
  push:
    branches:
      - main
    tags:
      - "v*" # Push events to matching v*, i.e. v1.0, v20.15.10
  pull_request:
    branches:
      - main
  schedule:
    - cron: "0 16 * * 1" # monday at noon est

concurrency:
  group: ${{ github.workflow }}-${{ github.ref }}
  cancel-in-progress: true

jobs:
  test:
    name: py${{ matrix.python-version }} ${{ matrix.backend }} ${{ matrix.platform }}
    runs-on: ${{ matrix.platform }}
    strategy:
      fail-fast: false
      matrix:
        platform: [windows-latest, macos-latest]
        python-version: ["3.9", "3.10", "3.11"]
        backend: [pyside2, pyqt5]
        include:
          - python-version: "3.8"
            platform: windows-latest
            backend: pyqt5
          - python-version: "3.11"
            platform: macos-latest
            backend: pyqt6
          # still issues in napari
          # - python-version: "3.11"
          #   platform: windows-latest
          #   backend: pyside6
        exclude:
          - python-version: "3.11"
            backend: pyside2

    steps:
      - uses: actions/checkout@v3

      - name: Set up Python ${{ matrix.python-version }}
        uses: actions/setup-python@v4
        with:
          python-version: ${{ matrix.python-version }}

      - name: Install Windows OpenGL
        if: runner.os == 'Windows'
        run: |
          git clone --depth 1 https://github.com/pyvista/gl-ci-helpers.git
          powershell gl-ci-helpers/appveyor/install_opengl.ps1

      - name: Install dependencies
        run: |
          python -m pip install --upgrade pip
          python -m pip install -e .[testing,${{ matrix.backend }}]

      - name: Install Micro-Manager
        run: mmcore install

      - name: Test
        run: python -m pytest -v --color=yes --cov=napari_micromanager --cov-report=xml

      - name: Coverage
        uses: codecov/codecov-action@v3

  test_linux:
    name: py3.9 pyqt5 ubuntu
    runs-on: ubuntu-latest
    steps:
      - uses: actions/checkout@v3

      - name: Set up Python
        uses: actions/setup-python@v4
        with:
          python-version: "3.9"

      - name: Install Linux Micro-Manager build tools and dependencies
        run: |
          sudo apt-get update
          sudo apt-get -y install build-essential autoconf automake libtool autoconf-archive pkg-config
          sudo apt-get -y install libboost-all-dev swig3.0

      - uses: tlambert03/setup-qt-libs@v1

      # - name: Cache micro-manager
      #   id: cache-micro-manager
      #   uses: actions/cache@v3
      #   with:
      #     path: micro-manager
      #     key: ${{ runner.os }}-micro-manager-cache-key

      - name: Build micro-manager
        # if: steps.cache-micro-manager.outputs.cache-hit != 'true'
        run: |
          git clone https://github.com/micro-manager/micro-manager.git
          cd micro-manager
          git submodule update --init --recursive
          ./autogen.sh
          ./configure --without-java
          make -C mmCoreAndDevices/MMDevice -j$(nproc)
          make -C mmCoreAndDevices/MMCore -j$(nproc)

      - name: Install micro-manager
        run: |
          cd micro-manager
          sudo make install
          sudo cp bindist/any-platform/*cfg /usr/local/lib/micro-manager

      - name: Install dependencies
        run: |
          python -m pip install --upgrade pip
          python -m pip install -e .[testing,pyqt5]

      - name: Run headless test
        uses: GabrielBB/xvfb-action@v1
        with:
          run: python -m pytest -v --color=yes

  deploy:
    name: Deploy
    needs: test
    if: "success() && startsWith(github.ref, 'refs/tags/')"
    runs-on: ubuntu-latest

    steps:
      - uses: actions/checkout@v3

      - name: Set up Python
        uses: actions/setup-python@v4
        with:
          python-version: "3.x"

      - name: install
        run: |
          git tag
          pip install --upgrade pip
          pip install -U build twine check-manifest
          check-manifest
          python -m build

      - name: twine check
        run: |
          twine check dist/*
          ls -lh dist

      - name: Build and publish
        run: twine upload dist/*
        env:
          TWINE_USERNAME: __token__
          TWINE_PASSWORD: ${{ secrets.TWINE_API_KEY }}