fixed bug introduced by rasterio update

[Dekermanjian]

Fixed bug introduced by rasterio update

Resolves issue #735

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📚 Documentation preview 📚: https://pymc-examples--745.org.readthedocs.build/en/745/

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[OriolAbril]

Fix looks good. I just realized that the notebook uses the extra dependencies template but doesn't specify which are the dependencies in the metadata. Do you mind fixing this here too?

Here is how the dropdown looks for this notebook:

And how it looks for one of the HSGP ones that also uses the template:

[Dekermanjian]

@OriolAbril yes, I will definitely fix it! Sorry, I didn't realize it wasn't correct earlier.

[Dekermanjian]

Hey @OriolAbril, how do I add the dependencies into the metadata? I tried adding it straight into the associated .myst.md file but that doesn't seem the right way to do it.

[OriolAbril]

changes in the myst files get overriden by the contents of the jupyternotebook in pre-commit. You have to either follow the instructions in https://www.pymc.io/projects/docs/en/latest/contributing/jupyter_style.html#extra-dependencies or modify the myst file, then manually call jupytext to convert myst->ipynb before pre-commit (not sure if outputs will be removed when doing this so I'd recommend the first option)

[Dekermanjian]

Thanks, @OriolAbril! I added the metadata and pushed the changes. Quick question, I wasn't able to figure out how to update the metadata using VSCode editor and had to launch Jupyter Lab in the web browser to do it. Do you know if it is possible to do it straight in the VSCode editor?

[OriolAbril]

I don't use vscode but it would be nice to add how to do it from there to the docs

[Dekermanjian]

@OriolAbril I figured out how to do it in VSCode.
At the top of the notebook to the right you need to click the '...' and select "edit cell tags (json)"

This will open a side panel. If you scroll all the way to the bottom you can add the dependencies: