From c87087c34cd4aa1f84c254860f8f9b7ff1ee816d Mon Sep 17 00:00:00 2001
From: yaz62 <sercharles19920620@gmail.com>
Date: Sun, 7 Feb 2021 10:40:18 -0500
Subject: [PATCH 1/3] minor changes

---
 prody/dynamics/exanm.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/prody/dynamics/exanm.py b/prody/dynamics/exanm.py
index 3219a827c..b81cf4e0d 100644
--- a/prody/dynamics/exanm.py
+++ b/prody/dynamics/exanm.py
@@ -38,7 +38,7 @@ def __init__(self, name='Unknown'):
         self._combined = None
 
     def buildMembrane(self, coords, **kwargs):
-        """Build Hessian matrix for given coordinate set.
+        """Build membrane lattice around **coords**.
 
         :arg coords: a coordinate set or an object with ``getCoords`` method
         :type coords: :class:`numpy.ndarray`

From 452b36892bbe58d1282c6328a83a84c31abc0889 Mon Sep 17 00:00:00 2001
From: yaz62 <sercharles19920620@gmail.com>
Date: Sun, 7 Feb 2021 10:46:41 -0500
Subject: [PATCH 2/3] updated version number

---
 PKG-INFO          | 4 ++--
 prody/__init__.py | 2 +-
 2 files changed, 3 insertions(+), 3 deletions(-)

diff --git a/PKG-INFO b/PKG-INFO
index e192f45cf..897ba8156 100644
--- a/PKG-INFO
+++ b/PKG-INFO
@@ -1,6 +1,6 @@
 Metadata-Version: 1.1
 Name: ProDy
-Version: 1.11
+Version: 2.0
 Summary: A Python Package for Protein Dynamics Analysis
 Home-page: http://www.csb.pitt.edu/ProDy
 Author: James Krieger, She Zhang, Hongchun Li, Cihan Kaya, Ahmet Bakan, and others
@@ -95,4 +95,4 @@ Requires: numpy (>=1.10)
 Requires: pyparsing
 Requires: biopython
 Requires: scipy
-Provides: prody (1.11)
+Provides: prody (2.0)
diff --git a/prody/__init__.py b/prody/__init__.py
index 97a5c8cdc..ba1a38861 100644
--- a/prody/__init__.py
+++ b/prody/__init__.py
@@ -1,6 +1,6 @@
 """ProDy is a package for Protein Dynamics, Sequence, and Structure Analysis"""
 
-__version__ = '1.11'
+__version__ = '2.0'
 __release__ = __version__ # + '-dev' # comment out '-dev' before a release
 
 import sys

From eff98c1c58162b40b7d13a666ca10587a4196854 Mon Sep 17 00:00:00 2001
From: yaz62 <sercharles19920620@gmail.com>
Date: Sun, 7 Feb 2021 10:57:02 -0500
Subject: [PATCH 3/3] minor fix

---
 prody/proteins/compare.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/prody/proteins/compare.py b/prody/proteins/compare.py
index eb3057d6c..36a4e397b 100644
--- a/prody/proteins/compare.py
+++ b/prody/proteins/compare.py
@@ -1381,7 +1381,7 @@ def _findAlignment(sequence, alignment):
 def getCEAlignMapping(target, chain):
     try:
         from .ccealign import ccealign
-    except:
+    except ImportError:
         LOGGER.warn('Could not import ccealign C/C++ extension.'
                     'It may not be installed properly.')
         return None