From c69cd99c6d3a9ba1eac13f27a7821a6752a26e93 Mon Sep 17 00:00:00 2001 From: James Krieger Date: Tue, 21 Dec 2021 10:04:41 +0000 Subject: [PATCH] added release notes --- docs/release/v2.0_series.rst | 35 +++++++++++++++++++++++++++++++++++ 1 file changed, 35 insertions(+) diff --git a/docs/release/v2.0_series.rst b/docs/release/v2.0_series.rst index 09133515f..e79a9daca 100644 --- a/docs/release/v2.0_series.rst +++ b/docs/release/v2.0_series.rst @@ -4,6 +4,41 @@ ProDy 2.0 Series .. contents:: :local: +2.0.1 (Dec 20, 2021) +------------------------------------------------------------------------------ + +**New Features**: + + * Added :function:`.calcRWSIP` for comparing sets of modes + + * New methods to convert :class:`.Atom`, :class:`.Atomic` and :class:`.EMDMAP` + to TEMPy objects, allowing calculations such as cross-correlation coefficient (CCC) + to EM maps. + + * Added :func:`.calcDynamicFlexibilityIndex` and :func:`.calcDynamicCouplingIndex` + for further interpretation of PRS results. + + * Reinstated the option of using forces in PRS as in ProDy v1.8 (`turbo=**False**`) + + * Added GitHub Actions Continuous Integration in place of Travis. + +**Bug Fixes and Improvements**: + + * Compatibility and bug fixes for various functions, including pyparsing for selections. + + * Extended :class:`.AdaptiveANM` to work with other models including explicit membrane + ANM, :class:`.exANM`. + + * Improved capabilities for fetching and parsing mmCIF and EMD files. + + * Improved handling of residue and serial numbers including hexadecimal and hybrid36 formats. + + * Consistency fixes. + + * More non-standard amino acids (MEN, CSB, CME). + +**Full Changelog**: https://github.com/prody/ProDy/compare/v2.0...v2.0.1 + 2.0 (Dec 30, 2020) ------------------------------------------------------------------------------