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Convergence Issue #10

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mohit1997 opened this issue May 4, 2020 · 0 comments
Open

Convergence Issue #10

mohit1997 opened this issue May 4, 2020 · 0 comments

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@mohit1997
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mohit1997 commented May 4, 2020 •
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I am using scPred to train a cell classification model. However, while calling the function eigenDecompose the function prcomp_irlba throws convergence error. I have a large number of genes (22k) and cells (25k). After I pick the first 5000 genes (maximum variance), the function doesn't throw any error.
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@mohit1997