diff --git a/Nona_multiome/cell_line_proportions.R b/Nona_multiome/cell_line_proportions.R index e647ef0..fbbb345 100644 --- a/Nona_multiome/cell_line_proportions.R +++ b/Nona_multiome/cell_line_proportions.R @@ -14,28 +14,39 @@ library("ggpomological") ##### Set up directories ##### datadir <- "/directflow/SCCGGroupShare/projects/himaro/imputing_snp/demultiplexing/demultiplex_Nona/processed_data_demultiplex2/log_dir/" +non_dir <- "/directflow/SCCGGroupShare/projects/nonfar/analysis/cardiac_multiome_directflow/demux_obj/" outdir <- "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Nona_multiome/" dir.create(outdir, recursive = TRUE) ##### Get a list of the village pools ##### -villages <- list.files(datadir, pattern = "Village") +villages <- list.files(non_dir, pattern = "Village") +villages <- grep("DemuxALL", villages, value = TRUE) ##### Get the singlets from the file ##### village_id_list <- lapply(villages, function(x){ print(x) - tmp <- fread(paste0(datadir,x,"/CombinedResults/Final_Assignments_demultiplexing_doublets_new_edit.txt"), sep = "\t") - tmp$Pool_ID <- x - tmp$Day <- as.numeric(as.character(gsub("Village_Day", "", tmp$Pool_ID))) - tmp$V1 <- NULL - return(tmp) + # tmp <- fread(paste0(datadir,x,"/CombinedResults/Final_Assignments_demultiplexing_doublets_new_edit.txt"), sep = "\t") + tmp <- readRDS(paste0(non_dir,x)) + dt <- data.table(tmp@meta.data) + dt$Pool_ID <- gsub("_DemuxALL.rds", "",x)) + dt$Day <- as.numeric(as.character(gsub("Village_Day", "", dt$Pool_ID))) + return(dt) }) village_id <- do.call(rbind, village_id_list) +village_id$Pool_ID_updated <- gsub("Day7$", "Day5b", village_id$Pool_ID) %>% + gsub("Day5$", "Day7b", .) %>% + gsub("Day15$", "Day4b", .) %>% + gsub("Day4$", "Day15b", .) %>% + gsub("b", "", .) + +village_id$Day_updated <- as.numeric(as.character(gsub("Village_Day", "", village_id$Pool_ID_updated))) + ### Update columnes ### village_id$Day <- factor(village_id$Day, levels = c(0,1,2,3,4,5,7,15)) village_id$Assignment <- gsub("^0_", "", village_id$Assignment) %>% @@ -47,17 +58,17 @@ village_id$Assignment <- gsub("^0_", "", village_id$Assignment) %>% village_id$DropletType <- ifelse(village_id$DropletType != "singlet", "doublet", village_id$DropletType) -data.table(prop.table(table(village_id[,c("DropletType", "Day")]), margin = 2)) +data.table(prop.table(table(village_id[,c("DropletType", "Day_updated")]), margin = 2)) -village_summary <- data.table(prop.table(table(village_id[,c("Assignment", "Day")]), margin = 2)) +village_summary <- data.table(prop.table(table(village_id[,c("Assignment", "Day_updated")]), margin = 2)) -village_summary_singlets <- data.table(prop.table(table(village_id[Assignment != "unassigned" & Assignment != "doublet",c("Assignment", "Day")]), margin = 2)) +village_summary_singlets <- data.table(prop.table(table(village_id[Assignment != "unassigned" & Assignment != "doublet",c("Assignment", "Day_updated")]), margin = 2)) -village_summary_singlets$Assignment <- factor(village_summary_singlets$Assignment, levels = rev(village_summary_singlets[Day == 15]$Assignment[order(village_summary_singlets[Day == 15]$N)])) +village_summary_singlets$Assignment <- factor(village_summary_singlets$Assignment, levels = rev(village_summary_singlets[Day_updated == 15]$Assignment[order(village_summary_singlets[Day_updated == 15]$N)])) ##### Make proportion plots (area plot) ##### -p_stacked_area <- ggplot(village_summary_singlets, aes(x = as.numeric(as.character(Day)), y = N, fill = factor(Assignment), group = Assignment)) + +p_stacked_area <- ggplot(village_summary_singlets, aes(x = as.numeric(as.character(Day_updated)), y = N, fill = factor(Assignment), group = Assignment)) + geom_area(alpha=0.6 , size=0.5, colour="black") + theme_classic() + scale_fill_manual(values = c("#f44336", "#e81f63", "#9c27b0", "#673ab7", "#3f51b5", "#2096f3","#2096f3", "#009688", "#4caf50", "#8bc34a", "#cddc39", "#ffeb3b", "#ffc108", "#ff9801", "#ff5723" ,"#795548", "#9e9e9e", "#607d8b")) + @@ -70,7 +81,7 @@ ggsave(p_stacked_area, filename = paste0(outdir,"stacked_area.pdf"), width = 7, ##### Make line plot of propotion over time ##### -p_line <- ggplot(village_summary_singlets, aes(x = as.numeric(as.character(Day)), y = N, color = Assignment)) + +p_line <- ggplot(village_summary_singlets, aes(x = as.numeric(as.character(Day_updated)), y = N, color = Assignment)) + geom_point() + theme_classic() + geom_line() + diff --git a/Variance/RNAvelocity/post_review/prepare_pseudotime.R b/Variance/RNAvelocity/post_review/prepare_pseudotime.R new file mode 100644 index 0000000..c440c7d --- /dev/null +++ b/Variance/RNAvelocity/post_review/prepare_pseudotime.R @@ -0,0 +1,44 @@ +library(tidyverse) +library(haven) +library(ggplot2) +library(lme4) +library(glmmTMB) +library(Seurat) +library(data.table) + + + + +dir <- "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/" +outdir <- paste0(dir,"output/Variance/RNAvelocity/post_review/data/") +dir.create(outdir, recursive = TRUE) + + + +##### Read in Data ##### +### seurat object ### +seurat <- readRDS(paste0(dir,"output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds")) + +### velocity metadata ### +velo_meta <- fread("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/scVelo/velocyto/scvelo_combat_corrected_all2/metadata.csv", sep = ",") +rownames(velo_meta) <- velo_meta$V1 +velo_meta$V1 <- NULL + +velo_meta_sub <- velo_meta[,c("n_unspliced_counts", "latent_time")] +rownames(velo_meta_sub) <- rownames(velo_meta) + +seurat <- AddMetaData(seurat, velo_meta_sub) + + +seurat@meta.data$Location <- gsub("_Baseline", "", seurat@meta.data$Location) %>% gsub("_Village.+", "", .) %>% gsub("Thawed", "Cryopreserved",.) + +seurat_noNA <- subset(seurat, subset = latent_time >= 0) + + +seurat_noNA@meta.data$Location <- gsub("_Baseline", "", seurat_noNA@meta.data$Location) %>% gsub("_Village.+", "", .) %>% gsub("Thawed", "Cryopreserved",.) +seurat_noNA@meta.data$Time <- gsub("Thawed Village Day 0", "Baseline", seurat_noNA@meta.data$Time) %>% gsub("Thawed Village Day 7", "Village", .) %>% gsub(" Day 4", "", .) +seurat_noNA@meta.data$Cryopreserved <-ifelse(seurat_noNA@meta.data$Location == "Sydney_Cryopreserved", "Cryopreserved", "Fresh") +seurat_noNA@meta.data$Location <- gsub("_Cryopreserved", "", seurat_noNA@meta.data$Location) + + +saveRDS(seurat_noNA, paste0(outdir, "seurat_integrated_all_times_clustered_1pct_expressing_pseudotime.rds")) \ No newline at end of file diff --git a/Variance/RNAvelocity/post_review/pseudotime_effect.R b/Variance/RNAvelocity/post_review/pseudotime_effect.R new file mode 100644 index 0000000..dfb1a32 --- /dev/null +++ b/Variance/RNAvelocity/post_review/pseudotime_effect.R @@ -0,0 +1,103 @@ +library(haven) +library(ggplot2) +library(glmmTMB) +library(Seurat) +library(tidyverse) +library(specr) +library(data.table) +library(dsLib) +library(pkgcond) +library(texreg) + + +inicio("Starting Analysis") + + + +##### Define functions ##### +icc_glmmtmb <- function(model, percent = TRUE) { + tmp <- VarCorr(model) + var <- do.call(rbind, lapply(names(tmp$cond), function(x) data.table("grp" = x, "vcov" = attr(tmp$cond[[x]], "stddev")^2))) + var <- rbind(var, data.table("grp" = "Residual", "vcov" = sigma(model)^2)) + sum_var <- sum(var$vcov) + var <- var %>% dplyr::mutate(icc = vcov/sum_var) + if (isTRUE(percent)) { + var <- var %>% dplyr::mutate(percent = .data$icc * 100) + } + return(var) +} + + + +##### Bring in variables ##### +### Bring in arguments +args <- commandArgs(trailingOnly = TRUE) +icc_interaction_outdir <- paste0(args[1]) +icc_outdir <- paste0(args[2]) +model_interaction_outdir <- paste0(args[3]) +model_outdir <- paste0(args[4]) +resid_outdir <- paste0(args[5]) +gene <- as.character(args[6]) + +print(icc_outdir) +print(icc_outdir) +print(model_outdir) +print(resid_outdir) +print(gene) + + + +##### Read in data ##### +### Seurat object with normalized data and covariates needed ### +seurat <- readRDS("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Variance/RNAvelocity/post_review/data/seurat_integrated_all_times_clustered_1pct_expressing_pseudotime.rds") + +### Dataframe of icc summaries so know what variables need to be fit for each gene ### +icc_summary <- fread("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/combined/sig_results.tsv.gz", sep = "\t") +colnames(icc_summary) <- gsub("gene", "ensg", colnames(icc_summary)) + + +### Make DF for modeling ### +df_hier_unscale <- data.frame("Expression" = seurat[["SCT"]]@scale.data[gene,], "Village" = as.factor(ifelse(seurat@meta.data$Time == "Baseline", 0, 1)), "Line" = seurat@meta.data$Final_Assignment, "Replicate" = as.factor(gsub("[A-Z][a-z]+", "", seurat@meta.data$MULTI_ID)), "Cryopreserved" = seurat$Cryopreserved, "Site" = seurat$Location, "Pseudotime" = round(seurat$latent_time, 2)) +colnames(df_hier_unscale)[1] <- "Expression" + + + +##### Get list of variables to fit before testing pseudotime effect ##### +variables <- icc_summary[ensg == gene & grp != "Residual"]$grp + + + +##### Test pseudotime impact ##### +### Fit the known variables to get residuals ### +model_all <- as.formula(paste0("Expression ~ (1|", paste0(variables, collapse = ") + (1|"), ")")) +model_glmmtmb <- suppress_warnings(glmmTMB(formula = noquote(model_all), data = df_hier_unscale, REML = TRUE), "giveCsparse") + + +### Test pseudotime on residuals ### +df_hier_unscale$Residuals <- resid(model_glmmtmb) + +model_pseudotime <- suppress_warnings(glmmTMB(Residuals ~ Pseudotime, data = df_hier_unscale, REML = TRUE), "giveCsparse") +model_pseudotime2 <- suppress_warnings(glmmTMB(Residuals ~ 1, data = df_hier_unscale, REML = TRUE), "giveCsparse") + +### Test with Anova ### +P_value <- anova(model_pseudotime2, model_pseudotime)$`Pr(>Chisq)`[2] +P_value <- anova(model_glmmtmb, model_pseudotime2)$`Pr(>Chisq)`[2] + + +test_plot <- ggplot(df_hier_unscale, aes(Pseudotime, Residuals, color = Site)) + + geom_point() + + facet_grid(~Line) + + geom_smooth(method = "lm", se = FALSE) + +ggsave(test_plot, filename = "/directflow/SCCGGroupShare/projects/DrewNeavin/test.png") + + +if (P_value < 0.05/(length(variables) + 1)){ + ### Test for amount of variance explained ### + model_pseudotime2 <- suppress_warnings(glmmTMB(Residuals ~ 1 + Pseudotime, data = df_hier_unscale, REML = TRUE), "giveCsparse") + + + + ### Test for interactions + +} diff --git a/Variance/jobs2run.txt b/Variance/jobs2run.txt new file mode 100644 index 0000000..3f58002 --- /dev/null +++ b/Variance/jobs2run.txt @@ -0,0 +1,320 @@ +Building DAG of jobs... +Error: Directory cannot be locked. This usually means that another Snakemake instance is running on this directory. Another possibility is that a previous run exited unexpectedly. +Job counts: + count jobs + 1 all + 30 partition_variance + 31 + +[Mon Mar 14 08:12:05 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000173826_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000173826_fitted_models.rds + jobid: 12666 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000173826_fitted_models.rds + wildcards: gene=ENSG00000173826 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Mon Mar 14 08:12:05 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000261242_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000261242_fitted_models.rds + jobid: 10519 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000261242_fitted_models.rds + wildcards: gene=ENSG00000261242 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Mon Mar 14 08:12:05 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000268573_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000268573_fitted_models.rds + jobid: 13002 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000268573_fitted_models.rds + wildcards: gene=ENSG00000268573 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Mon Mar 14 08:12:05 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000259049_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000259049_fitted_models.rds + jobid: 10461 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000259049_fitted_models.rds + wildcards: gene=ENSG00000259049 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Mon Mar 14 08:12:05 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000268836_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000268836_fitted_models.rds + jobid: 11269 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000268836_fitted_models.rds + wildcards: gene=ENSG00000268836 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Mon Mar 14 08:12:05 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000129226_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000129226_fitted_models.rds + jobid: 12126 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000129226_fitted_models.rds + wildcards: gene=ENSG00000129226 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Mon Mar 14 08:12:05 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000125650_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000125650_fitted_models.rds + jobid: 13709 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000125650_fitted_models.rds + wildcards: gene=ENSG00000125650 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Mon Mar 14 08:12:05 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000277763_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000277763_fitted_models.rds + jobid: 10480 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000277763_fitted_models.rds + wildcards: gene=ENSG00000277763 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Mon Mar 14 08:12:05 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000224687_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000224687_fitted_models.rds + jobid: 1182 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000224687_fitted_models.rds + wildcards: gene=ENSG00000224687 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Mon Mar 14 08:12:05 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000267571_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000267571_fitted_models.rds + jobid: 13702 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000267571_fitted_models.rds + wildcards: gene=ENSG00000267571 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Mon Mar 14 08:12:06 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000167083_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000167083_fitted_models.rds + jobid: 12562 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000167083_fitted_models.rds + wildcards: gene=ENSG00000167083 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Mon Mar 14 08:12:06 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000273002_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000273002_fitted_models.rds + jobid: 1041 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000273002_fitted_models.rds + wildcards: gene=ENSG00000273002 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Mon Mar 14 08:12:06 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000168939_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000168939_fitted_models.rds + jobid: 6645 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000168939_fitted_models.rds + wildcards: gene=ENSG00000168939 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Mon Mar 14 08:12:06 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000253506_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000253506_fitted_models.rds + jobid: 12654 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000253506_fitted_models.rds + wildcards: gene=ENSG00000253506 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Mon Mar 14 08:12:06 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000164743_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000164743_fitted_models.rds + jobid: 6694 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000164743_fitted_models.rds + wildcards: gene=ENSG00000164743 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Mon Mar 14 08:12:06 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000272476_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000272476_fitted_models.rds + jobid: 5166 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000272476_fitted_models.rds + wildcards: gene=ENSG00000272476 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Mon Mar 14 08:12:06 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000238045_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000238045_fitted_models.rds + jobid: 11588 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000238045_fitted_models.rds + wildcards: gene=ENSG00000238045 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Mon Mar 14 08:12:06 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000163576_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000163576_fitted_models.rds + jobid: 2600 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000163576_fitted_models.rds + wildcards: gene=ENSG00000163576 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Mon Mar 14 08:12:06 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000257839_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000257839_fitted_models.rds + jobid: 9709 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000257839_fitted_models.rds + wildcards: gene=ENSG00000257839 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Mon Mar 14 08:12:06 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000249222_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000249222_fitted_models.rds + jobid: 15011 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000249222_fitted_models.rds + wildcards: gene=ENSG00000249222 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Mon Mar 14 08:12:06 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000262089_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000262089_fitted_models.rds + jobid: 12091 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000262089_fitted_models.rds + wildcards: gene=ENSG00000262089 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Mon Mar 14 08:12:06 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000258813_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000258813_fitted_models.rds + jobid: 10575 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000258813_fitted_models.rds + wildcards: gene=ENSG00000258813 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Mon Mar 14 08:12:06 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000244558_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000244558_fitted_models.rds + jobid: 13386 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000244558_fitted_models.rds + wildcards: gene=ENSG00000244558 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Mon Mar 14 08:12:06 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000237637_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000237637_fitted_models.rds + jobid: 10077 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000237637_fitted_models.rds + wildcards: gene=ENSG00000237637 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Mon Mar 14 08:12:06 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000002746_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000002746_fitted_models.rds + jobid: 5571 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000002746_fitted_models.rds + wildcards: gene=ENSG00000002746 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Mon Mar 14 08:12:06 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000272459_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000272459_fitted_models.rds + jobid: 4553 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000272459_fitted_models.rds + wildcards: gene=ENSG00000272459 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Mon Mar 14 08:12:06 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000272854_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000272854_fitted_models.rds + jobid: 5883 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000272854_fitted_models.rds + wildcards: gene=ENSG00000272854 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Mon Mar 14 08:12:06 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000183111_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000183111_fitted_models.rds + jobid: 4428 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000183111_fitted_models.rds + wildcards: gene=ENSG00000183111 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Mon Mar 14 08:12:06 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000257740_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000257740_fitted_models.rds + jobid: 9601 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000257740_fitted_models.rds + wildcards: gene=ENSG00000257740 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Mon Mar 14 08:12:06 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000104903_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000104903_fitted_models.rds + jobid: 13884 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000104903_fitted_models.rds + wildcards: gene=ENSG00000104903 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Mon Mar 14 08:12:06 2022] +localrule all: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000279457_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000228463_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000237491_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000225880_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000230368_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000187634_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000188976_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000187961_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000187583_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000188290_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000187608_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000188157_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000131591_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000272141_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000162571_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000186891_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000078808_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000176022_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000184163_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000160087_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000162572_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000131584_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000169972_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000127054_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000224051_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000107404_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000162576_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000175756_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000221978_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000242485_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000272455_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000235098_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000179403_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000215915_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000160072_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000197785_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000205090_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000160075_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000215014_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000228594_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000272106_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000197530_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000189409_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000248333_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000189339_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000008128_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000215790_fitted_models.rds, 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/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000160209_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000160213_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000160214_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000160216_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000160218_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000241945_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000160221_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000160223_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000141959_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000160226_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000160233_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000182912_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000184787_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000236519_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000184900_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000183255_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000183250_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000160256_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000276529_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000197381_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000186866_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000223768_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000273796_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000182871_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000173638_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000233922_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000183570_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000274248_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000142156_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000142173_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000160282_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000160284_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000160285_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000215424_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000160294_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000239415_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000182362_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000160298_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000160299_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000160305_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000160310_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000198888_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000198763_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000198804_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000198712_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000228253_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000198899_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000198938_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000198840_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000212907_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000198886_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000198786_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000198695_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000198727_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000276256_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000273748_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000278817_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000277196_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000271254_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000285053_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284770_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284681_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284753_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000281398_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000234511_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000285437_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284691_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000175611_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000285447_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284976_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284024_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000283930_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000261308_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000285077_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284906_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000224578_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000279668_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284526_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000285230_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000182310_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000283567_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000283809_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000283900_fitted_models.rds + jobid: 0 + reason: Input files updated by another job: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000164743_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000259049_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000104903_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000262089_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000273002_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000237637_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000168939_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000261242_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000257740_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000253506_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000224687_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000257839_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000244558_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000272476_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000183111_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000167083_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000272854_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000268573_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000002746_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000267571_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000258813_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000129226_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000238045_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000277763_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000125650_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000268836_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000173826_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000249222_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000272459_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000163576_fitted_models.rds + +Job counts: + count jobs + 1 all + 30 partition_variance + 31 +This was a dry-run (flag -n). The order of jobs does not reflect the order of execution. diff --git a/Variance/post_review/Rplots.pdf b/Variance/post_review/Rplots.pdf new file mode 100644 index 0000000..0b13679 Binary files /dev/null and b/Variance/post_review/Rplots.pdf differ diff --git a/Variance/post_review/jobs.txt b/Variance/post_review/jobs.txt new file mode 100644 index 0000000..3c29ec1 --- /dev/null +++ b/Variance/post_review/jobs.txt @@ -0,0 +1,360 @@ +Building DAG of jobs... +Job counts: + count jobs + 1 all + 38 partition_variance + 39 + +[Sun Mar 27 15:44:57 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000196132_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000196132_fitted_models.rds + jobid: 13542 + wildcards: gene=ENSG00000196132 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 15:44:57 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000284526_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284526_fitted_models.rds + jobid: 15287 + wildcards: gene=ENSG00000284526 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 15:44:57 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000283900_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000283900_fitted_models.rds + jobid: 15292 + wildcards: gene=ENSG00000283900 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 15:44:57 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000284753_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284753_fitted_models.rds + jobid: 15272 + wildcards: gene=ENSG00000284753 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 15:44:57 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000285437_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000285437_fitted_models.rds + jobid: 15275 + wildcards: gene=ENSG00000285437 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 15:44:57 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000279668_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000279668_fitted_models.rds + jobid: 15286 + wildcards: gene=ENSG00000279668 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 15:44:57 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000175611_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000175611_fitted_models.rds + jobid: 15277 + wildcards: gene=ENSG00000175611 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 15:44:57 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000234511_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000234511_fitted_models.rds + jobid: 15274 + wildcards: gene=ENSG00000234511 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 15:44:57 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000259715_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000259715_fitted_models.rds + jobid: 10933 + wildcards: gene=ENSG00000259715 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 15:44:57 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000158555_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000158555_fitted_models.rds + jobid: 8387 + wildcards: gene=ENSG00000158555 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 15:44:57 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000285230_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000285230_fitted_models.rds + jobid: 15288 + wildcards: gene=ENSG00000285230 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 15:44:57 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000185900_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000185900_fitted_models.rds + jobid: 6839 + wildcards: gene=ENSG00000185900 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 15:44:57 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000184304_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000184304_fitted_models.rds + jobid: 10373 + wildcards: gene=ENSG00000184304 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 15:44:57 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000261308_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000261308_fitted_models.rds + jobid: 15282 + wildcards: gene=ENSG00000261308 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 15:44:57 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000284976_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284976_fitted_models.rds + jobid: 15279 + wildcards: gene=ENSG00000284976 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 15:44:57 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000258593_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000258593_fitted_models.rds + jobid: 10761 + wildcards: gene=ENSG00000258593 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 15:44:57 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000284681_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284681_fitted_models.rds + jobid: 15271 + wildcards: gene=ENSG00000284681 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 15:44:57 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000217930_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000217930_fitted_models.rds + jobid: 11412 + wildcards: gene=ENSG00000217930 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 15:44:57 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000283567_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000283567_fitted_models.rds + jobid: 15290 + wildcards: gene=ENSG00000283567 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 15:44:57 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000197566_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000197566_fitted_models.rds + jobid: 12203 + wildcards: gene=ENSG00000197566 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 15:44:57 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000275074_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000275074_fitted_models.rds + jobid: 6720 + wildcards: gene=ENSG00000275074 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 15:44:57 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000185477_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000185477_fitted_models.rds + jobid: 3658 + wildcards: gene=ENSG00000185477 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 15:44:57 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000285447_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000285447_fitted_models.rds + jobid: 15278 + wildcards: gene=ENSG00000285447 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 15:44:57 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000283930_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000283930_fitted_models.rds + jobid: 15281 + wildcards: gene=ENSG00000283930 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 15:44:57 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000284906_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284906_fitted_models.rds + jobid: 15284 + wildcards: gene=ENSG00000284906 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 15:44:57 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000281398_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000281398_fitted_models.rds + jobid: 15273 + wildcards: gene=ENSG00000281398 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 15:44:57 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000224578_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000224578_fitted_models.rds + jobid: 15285 + wildcards: gene=ENSG00000224578 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 15:44:57 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000272617_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000272617_fitted_models.rds + jobid: 11832 + wildcards: gene=ENSG00000272617 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 15:44:57 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000285053_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000285053_fitted_models.rds + jobid: 15269 + wildcards: gene=ENSG00000285053 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 15:44:57 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000284770_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284770_fitted_models.rds + jobid: 15270 + wildcards: gene=ENSG00000284770 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 15:44:57 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000285077_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000285077_fitted_models.rds + jobid: 15283 + wildcards: gene=ENSG00000285077 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 15:44:57 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000140481_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000140481_fitted_models.rds + jobid: 11091 + wildcards: gene=ENSG00000140481 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 15:44:57 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000284691_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284691_fitted_models.rds + jobid: 15276 + wildcards: gene=ENSG00000284691 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 15:44:57 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000119771_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000119771_fitted_models.rds + jobid: 1596 + wildcards: gene=ENSG00000119771 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 15:44:57 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000283809_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000283809_fitted_models.rds + jobid: 15291 + wildcards: gene=ENSG00000283809 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 15:44:57 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000167011_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000167011_fitted_models.rds + jobid: 5836 + wildcards: gene=ENSG00000167011 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 15:44:57 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000182310_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000182310_fitted_models.rds + jobid: 15289 + wildcards: gene=ENSG00000182310 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 15:44:57 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000284024_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284024_fitted_models.rds + jobid: 15280 + wildcards: gene=ENSG00000284024 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 15:44:58 2022] +localrule all: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000279457_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000228463_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000237491_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000225880_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000230368_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000187634_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000188976_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000187961_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000187583_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000188290_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000187608_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000188157_fitted_models.rds, 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/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284681_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284753_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000281398_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000234511_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000285437_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284691_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000175611_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000285447_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284976_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284024_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000283930_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000261308_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000285077_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284906_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000224578_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000279668_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284526_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000285230_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000182310_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000283567_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000283809_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000283900_fitted_models.rds + jobid: 0 + +Job counts: + count jobs + 1 all + 38 partition_variance + 39 +This was a dry-run (flag -n). The order of jobs does not reflect the order of execution. diff --git a/Variance/post_review/jobs2run.txt b/Variance/post_review/jobs2run.txt new file mode 100644 index 0000000..fe1d52c --- /dev/null +++ b/Variance/post_review/jobs2run.txt @@ -0,0 +1,269 @@ +Building DAG of jobs... +Job counts: + count jobs + 1 all + 25 partition_variance + 26 + +[Sun Mar 27 19:40:59 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000284681_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284681_fitted_models.rds + jobid: 15271 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284681_fitted_models.rds + wildcards: gene=ENSG00000284681 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 19:40:59 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000285077_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000285077_fitted_models.rds + jobid: 15283 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000285077_fitted_models.rds + wildcards: gene=ENSG00000285077 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 19:40:59 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000182310_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000182310_fitted_models.rds + jobid: 15289 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000182310_fitted_models.rds + wildcards: gene=ENSG00000182310 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 19:40:59 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000284753_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284753_fitted_models.rds + jobid: 15272 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284753_fitted_models.rds + wildcards: gene=ENSG00000284753 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 19:40:59 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000272617_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000272617_fitted_models.rds + jobid: 11832 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000272617_fitted_models.rds + wildcards: gene=ENSG00000272617 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 19:40:59 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000284526_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284526_fitted_models.rds + jobid: 15287 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284526_fitted_models.rds + wildcards: gene=ENSG00000284526 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 19:40:59 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000234511_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000234511_fitted_models.rds + jobid: 15274 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000234511_fitted_models.rds + wildcards: gene=ENSG00000234511 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 19:40:59 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000285447_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000285447_fitted_models.rds + jobid: 15278 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000285447_fitted_models.rds + wildcards: gene=ENSG00000285447 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 19:40:59 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000283809_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000283809_fitted_models.rds + jobid: 15291 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000283809_fitted_models.rds + wildcards: gene=ENSG00000283809 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 19:40:59 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000283567_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000283567_fitted_models.rds + jobid: 15290 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000283567_fitted_models.rds + wildcards: gene=ENSG00000283567 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 19:40:59 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000261308_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000261308_fitted_models.rds + jobid: 15282 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000261308_fitted_models.rds + wildcards: gene=ENSG00000261308 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 19:40:59 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000283930_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000283930_fitted_models.rds + jobid: 15281 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000283930_fitted_models.rds + wildcards: gene=ENSG00000283930 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 19:40:59 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000283900_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000283900_fitted_models.rds + jobid: 15292 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000283900_fitted_models.rds + wildcards: gene=ENSG00000283900 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 19:40:59 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000285437_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000285437_fitted_models.rds + jobid: 15275 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000285437_fitted_models.rds + wildcards: gene=ENSG00000285437 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 19:40:59 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000285230_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000285230_fitted_models.rds + jobid: 15288 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000285230_fitted_models.rds + wildcards: gene=ENSG00000285230 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 19:40:59 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000175611_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000175611_fitted_models.rds + jobid: 15277 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000175611_fitted_models.rds + wildcards: gene=ENSG00000175611 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 19:40:59 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000224578_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000224578_fitted_models.rds + jobid: 15285 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000224578_fitted_models.rds + wildcards: gene=ENSG00000224578 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 19:40:59 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000284024_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284024_fitted_models.rds + jobid: 15280 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284024_fitted_models.rds + wildcards: gene=ENSG00000284024 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 19:40:59 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000285053_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000285053_fitted_models.rds + jobid: 15269 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000285053_fitted_models.rds + wildcards: gene=ENSG00000285053 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 19:40:59 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000284906_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284906_fitted_models.rds + jobid: 15284 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284906_fitted_models.rds + wildcards: gene=ENSG00000284906 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 19:40:59 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000279668_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000279668_fitted_models.rds + jobid: 15286 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000279668_fitted_models.rds + wildcards: gene=ENSG00000279668 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 19:40:59 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000284976_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284976_fitted_models.rds + jobid: 15279 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284976_fitted_models.rds + wildcards: gene=ENSG00000284976 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 19:40:59 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000284770_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284770_fitted_models.rds + jobid: 15270 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284770_fitted_models.rds + wildcards: gene=ENSG00000284770 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 19:40:59 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000284691_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284691_fitted_models.rds + jobid: 15276 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284691_fitted_models.rds + wildcards: gene=ENSG00000284691 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 19:40:59 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000281398_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000281398_fitted_models.rds + jobid: 15273 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000281398_fitted_models.rds + wildcards: gene=ENSG00000281398 + resources: mem_per_thread_gb=32, disk_per_thread_gb=32 + + +[Sun Mar 27 19:40:59 2022] +localrule all: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000279457_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000228463_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000237491_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000225880_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000230368_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000187634_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000188976_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000187961_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000187583_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000188290_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000187608_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000188157_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000131591_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000272141_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000162571_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000186891_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000078808_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000176022_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000184163_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000160087_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000162572_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000131584_fitted_models.rds, 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/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000283930_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000261308_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000285077_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284906_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000224578_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000279668_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284526_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000285230_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000182310_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000283567_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000283809_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000283900_fitted_models.rds + jobid: 0 + reason: Input files updated by another job: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000272617_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000285077_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000283567_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000283809_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000283900_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284526_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000234511_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000285447_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000285230_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000182310_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000175611_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284753_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284681_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284024_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000285053_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284906_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000279668_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000285437_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000281398_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000224578_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284976_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284770_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000283930_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000261308_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000284691_fitted_models.rds + +Job counts: + count jobs + 1 all + 25 partition_variance + 26 +This was a dry-run (flag -n). The order of jobs does not reflect the order of execution. diff --git a/Variance/post_review/prepare_data.R b/Variance/post_review/prepare_data.R new file mode 100644 index 0000000..b10a8c0 --- /dev/null +++ b/Variance/post_review/prepare_data.R @@ -0,0 +1,21 @@ +library(Seurat) +liberary(tidyverse) +library(dplyr) +library(data.table) + + +##### Read in seurat with genes ##### +seurat <- readRDS("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds") + +seurat@meta.data$Location <- gsub("_Baseline", "", seurat@meta.data$Location) %>% gsub("_Village.+", "", .) %>% gsub("Thawed", "Cryopreserved",.) +seurat@meta.data$Time <- gsub("Thawed Village Day 0", "Baseline", seurat@meta.data$Time) %>% gsub("Thawed Village Day 7", "Village", .) %>% gsub(" Day 4", "", .) + +seurat <- subset(seurat, subset = Location != "Sydney_Cryopreserved") + +seurat <- subset(seurat, features = rownames(seurat)[which(rowSums(seurat[["SCT"]]@counts > 0)/ncol(seurat[["SCT"]]@counts) >= 0.01)]) + +seurat <- SCTransform(seurat, verbose = TRUE, vars.to.regress = c("scores.G1", "scores.S", "scores.G2M", "percent.mt", "percent.rb"), return.only.var.genes = FALSE) + +saveRDS(seurat, "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/seurat_integrated_noncryo_1pct_expressing.rds") + +fwrite(data.table(Gene = rownames(seurat)), "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/seurat_integrated_noncryo_1pct_expressing_genes.tsv", sep = "\t") \ No newline at end of file diff --git a/Variance/post_review/variance_partition_post_review.R b/Variance/post_review/variance_partition_post_review.R new file mode 100644 index 0000000..d2943c4 --- /dev/null +++ b/Variance/post_review/variance_partition_post_review.R @@ -0,0 +1,216 @@ +library(haven) +library(ggplot2) +library(glmmTMB) +library(Seurat) +library(tidyverse) +library(specr) +library(data.table) +library(dsLib) +library(pkgcond) +library(texreg) + + +inicio("Starting Analysis") + + +##### Define functions ##### +icc_glmmtmb <- function(model, percent = TRUE) { + tmp <- VarCorr(model) + var <- do.call(rbind, lapply(names(tmp$cond), function(x) data.table("grp" = x, "vcov" = attr(tmp$cond[[x]], "stddev")^2))) + var <- rbind(var, data.table("grp" = "Residual", "vcov" = sigma(model)^2)) + sum_var <- sum(var$vcov) + var <- var %>% dplyr::mutate(icc = vcov/sum_var) + if (isTRUE(percent)) { + var <- var %>% dplyr::mutate(percent = .data$icc * 100) + } + return(var) +} + + + +##### Bring in variables ##### +### Bring in arguments +args <- commandArgs(trailingOnly = TRUE) +icc_outdir <- paste0(args[1]) +model_outdir <- paste0(args[2]) +resid_outdir <- paste0(args[3]) +gene <- as.character(args[4]) + +print(icc_outdir) +print(model_outdir) +print(resid_outdir) +print(gene) + + + +##### Read in seurat with genes ##### +seurat <- readRDS("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/seurat_integrated_noncryo_1pct_expressing.rds") + + +### Make DF for modeling ### +df_hier_unscale <- data.frame("Expression" = seurat[["SCT"]]@scale.data[gene,], "Village" = as.factor(ifelse(seurat@meta.data$Time == "Baseline", 0, 1)), "Line" = seurat@meta.data$Final_Assignment, "Replicate" = as.factor(gsub("[A-Z][a-z]+", "", seurat@meta.data$MULTI_ID)), "Site" = seurat$Location) +colnames(df_hier_unscale)[1] <- "Expression" + + + +##### Leave one out method ##### +variables <- c("Line", "Village", "Site", "Replicate","Village:Line", "Line:Site", "Village:Site", "Replicate:Village", "Replicate:Line", "Replicate:Site") + +model_all <- as.formula(paste0("Expression ~ (1|", paste0(variables, collapse = ") + (1|"), ")")) + + +boolFalse<-F +while(boolFalse==F & length(variables) > 0){ + tryCatch({ + print(variables) + model_glmmtmb <- suppress_warnings(glmmTMB(formula = noquote(model_all), data = df_hier_unscale, REML = TRUE), "giveCsparse") + boolFalse<-T + },error=function(e){ + },finally={ + if (length(variables) > 1){ + variables <- variables[1:(length(variables) -1)] + } else { + variables <- c() + } + }) +} + + +if (!length(variables) == 0){ + + + ### Deal with singular fits by removing last variable until a fit can be found - ordered in variables buy importance + while (!model_glmmtmb$sdr$pdHess & length(variables) > 0 ){ + print("Singular fit: removing last variable and rerunning with one less covariate.") + if (length(variables) > 1){ + variables <- variables[1:(length(variables) -1)] + print(variables) + model_all <- as.formula(paste0("Expression ~ (1|", paste0(variables, collapse = ") + (1|"), ")")) + model_glmmtmb <- suppress_warnings(glmmTMB(formula = noquote(model_all), data = df_hier_unscale, REML = TRUE), "giveCsparse") + } else { + variables <- c() + } + } + + print(variables) + + if (length(variables) > 0){ + + model_loo <- list() + + icc <- data.table(grp = variables, P = as.numeric(NA)) + + for (variable in variables){ + print(variable) + if (length(variables) > 1){ + model <- as.formula(paste0("Expression ~ (1|", paste0(variables[!variables %in% variable], collapse = ") + (1|"), ")")) + } else { + model <- as.formula(paste0("Expression ~ 1")) + } + model_loo[[variable]] <- suppress_warnings(glmmTMB(formula = noquote(model), data = df_hier_unscale, REML = TRUE), "giveCsparse") + icc[grp == variable]$P <- anova(model_loo[[variable]], model_glmmtmb)$`Pr(>Chisq)`[2] + } + + + if (!(any(icc[grp != "Residual"]$P > 0.05/length(variables)) | any(is.na(icc[grp != "Residual"]$P)))){ + model_loo_updated <- model_loo + + updated_model <- as.formula(paste0("Expression ~ 1 + (1|", paste0(variables, collapse = ") + (1|"), ")")) + + model_loo_updated[["all"]] <- suppress_warnings(glmmTMB(formula = noquote(updated_model), data = df_hier_unscale, REML = TRUE), "giveCsparse") + + ### Calculate the variance explained by each of the included variables ### + icc <- icc_glmmtmb(model_loo_updated[["all"]]) + + + ### Recalfulate significance ### + icc$P <- as.numeric(NA) + icc$gene <- gene + + for (variable in variables){ + print(variable) + if (length(variables) > 1){ + model <- as.formula(paste0("Expression ~ 1 + (1|", paste0(variables[!variables %in% variable], collapse = ") + (1|"), ")")) + } else { + model <- as.formula(paste0("Expression ~ 1")) + } + model_loo_updated[[variable]] <- suppress_warnings(glmmTMB(formula = noquote(model), data = df_hier_unscale, REML = TRUE), "giveCsparse") + icc[grp == variable]$P <- anova(model_loo_updated[[variable]], model_loo_updated[["all"]])$`Pr(>Chisq)`[2] + } + } + + + while((any(icc[grp != "Residual"]$P > 0.05/length(variables)) | any(is.na(icc[grp != "Residual"]$P)))){ + + print("Removing non-significant vartiables and retesting signficance") + + ##### Identify variables to keep ##### + variables <- icc[P < 0.05/length(variables)]$grp + + if (length(variables) > 0){ + + ##### Calculate full model ##### + updated_model <- as.formula(paste0("Expression ~ 1 + (1|", paste0(variables, collapse = ") + (1|"), ")")) + + + model_loo_updated <- list() + model_loo_updated[["all"]] <- suppress_warnings(glmmTMB(formula = noquote(updated_model), data = df_hier_unscale, REML = TRUE), "giveCsparse") + + + + ### Calculate the variance explained by each of the included variables ### + icc <- icc_glmmtmb(model_loo_updated[["all"]]) + + + + ### Recalfulate significance ### + icc$P <- as.numeric(NA) + icc$gene <- gene + + for (variable in variables){ + print(variable) + if (length(variables) > 1){ + model <- as.formula(paste0("Expression ~ 1 + (1|", paste0(variables[!variables %in% variable], collapse = ") + (1|"), ")")) + } else { + model <- as.formula(paste0("Expression ~ 1")) + } + model_loo_updated[[variable]] <- suppress_warnings(glmmTMB(formula = noquote(model), data = df_hier_unscale, REML = TRUE), "giveCsparse") + icc[grp == variable]$P <- anova(model_loo_updated[[variable]], model_loo_updated[["all"]])$`Pr(>Chisq)`[2] + } + + + + } else { + icc <- data.table(grp=character(), vcov=numeric(), icc=numeric(), percent=numeric(), P=numeric(), gene=character()) + model_loo_updated <- list() + } + } + + + ### If line is significant, then get residuals for downstream qtl checks ### + if ("Line" %in% variables){ + print("Making residuals for qtl detection") + if (length(variables) > 1){ + model_no_line <- as.formula(paste0("Expression ~ (1|", paste0(variables[!variables %in% "Line"], collapse = ") + (1|"), ")")) + } else { + model_no_line <- as.formula(paste0("Expression ~ 1")) + } + fit_no_line <- glmmTMB(formula = noquote(model_no_line), data = df_hier_unscale, REML = TRUE) + residuals <- resid(fit_no_line) + saveRDS(residuals, paste0(resid_outdir, gene, "_residuals4qtl.rds"), compress = TRUE) + } + } else { + icc <- data.table(grp=character(), vcov=numeric(), icc=numeric(), percent=numeric(), P=numeric(), gene=character()) + model_loo_updated <- list() + } +} else { + icc <- data.table(grp=character(), vcov=numeric(), icc=numeric(), percent=numeric(), P=numeric(), gene=character()) + model_loo_updated <- list() +} + + +saveRDS(icc, paste0(icc_outdir, gene, "_icc.rds"), compress = TRUE) +saveRDS(model_loo_updated, paste0(model_outdir, gene, "_fitted_models.rds"), compress = TRUE) + + +fin() \ No newline at end of file diff --git a/Variance/post_review/variance_partition_post_review.smk b/Variance/post_review/variance_partition_post_review.smk new file mode 100644 index 0000000..5adca6a --- /dev/null +++ b/Variance/post_review/variance_partition_post_review.smk @@ -0,0 +1,37 @@ +import pandas as pd + + +genes_file = "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/seurat_integrated_noncryo_1pct_expressing_genes.tsv" +genes = pd.read_csv(genes_file, sep = "\t") + + +rule all: + input: + expand("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/{gene}_fitted_models.rds", gene = genes.Gene) + + +rule partition_variance: + input: + seurat = "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds" + output: + "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/{gene}_icc.rds", + "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/{gene}_fitted_models.rds" + resources: + mem_per_thread_gb = lambda wildcards, attempt: attempt * 16, + disk_per_thread_gb = lambda wildcards, attempt: attempt * 16 + threads: 4 + params: + script = "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/scripts/Variance/post_review/variance_partition_post_review.R", + out_icc="/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/", + out_model="/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/", + out_resids="/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/residuals4qtl/" + log: + shell: + """ + + /directflow/SCCGGroupShare/projects/DrewNeavin/software/anaconda3/envs/baseR402/bin/Rscript {params.script} {params.out_icc} {params.out_model} {params.out_resids} {wildcards.gene} + """ + + # eval "$(conda shell.bash hook)" + # conda activate baseR402 + diff --git a/Variance/post_review/variance_partition_post_review_combine.R b/Variance/post_review/variance_partition_post_review_combine.R new file mode 100644 index 0000000..0788632 --- /dev/null +++ b/Variance/post_review/variance_partition_post_review_combine.R @@ -0,0 +1,469 @@ +##### Reason: combine the results for the variance explained by different factors for each gene +##### Author: Drew Neavin +##### Date: 14 March, 2022 + + +##### Load in libraries ##### +library(data.table) +library(tidyverse) +library(ggridges) +library(raincloudplots) +library(ggdist) +library(clusterProfiler) +library(org.Hs.eg.db) +library(GOSemSim) + + + +##### Set up directories ##### +dir <- "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/" +icc_dir <- "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/" +outdir <- "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/combined/" + +dir.create(outdir, recursive = TRUE) + + +vars <- c("Line", "Village", "Site", "Replicate","Village:Line", "Line:Site", "Village:Site", "Replicate:Village", "Replicate:Line", "Replicate:Site", "Residual") +var_colors <- c("#9e0142", "#d53e4f", "#f46d43", "#fdae61", "#fee08b", "#e6f598", "#abdda4", "#66c2a5", "#3288bd", "#5e4fa2", "gray90") +names(var_colors) <- vars + + +##### Get list of icc files ##### +icc_files <- list.files(icc_dir) + + + +##### Read in icc results ##### +icc_results_list <- lapply(icc_files, function(x){ + readRDS(paste0(icc_dir,x)) +}) +names(icc_results_list) <- icc_files + + + +##### Merge icc results into a single data.table ##### +icc_dt <- do.call(rbind, icc_results_list) + +icc_dt$percent_round <- round(icc_dt$percent) + +icc_dt$grp <- factor(icc_dt$grp, levels= rev(c("Line", "Village", "Site", "Replicate","Village:Line", "Line:Site", "Village:Site", "Replicate:Village", "Replicate:Line", "Replicate:Site", "Residual"))) + +group_size <- data.table(table(icc_dt$grp)) +colnames(group_size) <- c("grp", "size") +group_size$grp_size <- paste0(group_size$grp, "\nN = ", group_size$size) + +icc_dt <- group_size[icc_dt, on = "grp"] +icc_dt$grp_size <- factor(icc_dt$grp_size, levels = unique(group_size$grp_size)) + + + +##### Make a figure of stacked variance explained ##### +### Order based on line variance explained ### +genes_list <- list() + +for (group in c("Line", "Village", "Site", "Replicate","Village:Line", "Line:Site", "Village:Site", "Replicate:Village", "Replicate:Line", "Replicate:Site", "Residual")){ + genes_list[[group]] <- icc_dt[grp == group][rev(order(percent_round))]$gene +} + +genes <- unique(unlist(genes_list)) + +icc_dt$gene <- factor(icc_dt$gene, levels = genes) + + + +## First on line percent, then village percent ## +bar_proportions <- ggplot(icc_dt, aes(x = gene, y = percent, fill = grp)) + + geom_bar(position="stack", stat="identity") + + theme_classic() + + theme(axis.title.x=element_blank(), + axis.text.x=element_blank(), + axis.ticks.x=element_blank()) + +ggsave(bar_proportions, filename = paste0(outdir, "variance_explained_bar.png"), width = 20) + + + +### Try boxplot ### +boxplot <- ggplot(icc_dt, aes(x = factor(grp, levels = rev(levels(grp))), y = percent, fill = factor(grp, levels = rev(levels(grp))), color = factor(grp, levels = rev(levels(grp))))) + + geom_boxplot(alpha = 0.5, size = 0.5) + + theme_classic() + + xlab("Covariate") + + theme(axis.text.x = element_text(angle = 90, vjust = 0.5, hjust=1), + legend.position="none") + +ggsave(boxplot, filename = paste0(outdir, "variance_explained_box.png"), height = 4, width = 5) + + +### Try ridgplots ### +pRidges <- ggplot(icc_dt[grp != "Residual"], aes(x = percent, y = factor(grp, levels = rev(levels(grp))), fill = factor(grp, levels = rev(levels(grp))))) + + geom_density_ridges(stat = "binline", bins = 200, scale = 0.95, draw_baseline = FALSE) + + # geom_density_ridges() + + theme_classic() + +ggsave(pRidges, filename = paste0(outdir, "variance_explained_ridge.png"), height = 8, width = 10) + +### Try ridgplots ### +pRidges_pop <- ggplot(icc_dt[grp != "Residual"][percent > 10], aes(x = percent, y = factor(grp, levels = rev(levels(grp))), fill = factor(grp, levels = rev(levels(grp))))) + + geom_density_ridges(stat = "binline", bins = 180, scale = 0.95, draw_baseline = FALSE) + + # geom_density_ridges() + + theme_classic() + +ggsave(pRidges_pop, filename = paste0(outdir, "variance_explained_ridge_pop.png"), height = 8, width = 10) + + +pRaincloud <- ggplot(icc_dt, aes(x = percent, y = factor(grp_size, levels = rev(levels(grp_size))), fill = factor(grp, levels = rev(vars)))) + + geom_density_ridges(stat = "binline", bins = 90, scale = 0.7, draw_baseline = FALSE, aes(height =..ndensity..), alpha = 0.75) + + geom_boxplot(size = 0.5,width = .15, outlier.size = 0.25, position = position_nudge(y=-0.12), alpha = 0.75) + + coord_cartesian(xlim = c(1.2, NA), clip = "off") + + theme_classic() + + theme(axis.title.y=element_blank()) + + xlab("Percent Variance Explained") + + scale_y_discrete(expand = c(0.03, 0)) + + scale_fill_manual(values = var_colors) + +ggsave(pRaincloud, filename = paste0(outdir, "variance_explained_raincloud.png"), height = 8, width = 7) +ggsave(pRaincloud, filename = paste0(outdir, "variance_explained_raincloud.pdf"), height = 8, width = 7) + + + +##### Add gene IDs for easy identification downstream ##### +GeneConversion1 <- read_delim("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/data/Expression_200128_A00152_0196_BH3HNFDSXY/GE/DRENEA_1/outs/filtered_feature_bc_matrix/features.tsv.gz", col_names = F, delim = "\t") +GeneConversion2 <- read_delim("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/data/Expression_200128_A00152_0196_BH3HNFDSXY/GE/Village_B_1_week/outs/filtered_feature_bc_matrix/features.tsv.gz", col_names = F, delim = "\t") + +GeneConversion <- unique(rbind(GeneConversion1, GeneConversion2)) +GeneConversion <- GeneConversion[!duplicated(GeneConversion$X1),] +GeneConversion$X3 <- NULL +colnames(GeneConversion) <- c("gene", "Gene_ID") + +GeneConversion <- data.table(GeneConversion) + + +### Add the gene IDs to the icc_dt ### + +icc_dt <- GeneConversion[icc_dt, on = "gene"] + +icc_dt[grp == "Site"][rev(order(percent))]$Gene_ID +icc_dt[grp == "Line"][rev(order(percent))]$Gene_ID +icc_dt[grp == "Village"][rev(order(percent))]$Gene_ID + +fwrite(icc_dt, paste0(outdir, "sig_results.tsv.gz"), sep = "\t", compress = "gzip") + +## Highlight +## X chromosome genes - wouldn't expect these to be Line-biased because expressed by both males and females +## Y chromosome genes - should be line-biased because expressed by only males and have some male(s) and some female(s) +## mt genes +## ribosomal genes +## look at gsea and kegg pathways for each + +## Read in gtf used as reference and pull just X, Y or MT chromosome genes from it, use ribosomal file for rb genes +gtf <- fread("/directflow/GWCCGPipeline/projects/reference/refdata-cellranger-GRCh38-3.0.0/genes/genes.gtf", sep = "\t", autostart = 6, header = FALSE) + +gtf_genes <- gtf[!(grep("transcript_id", V9))] + +gtf_genes$V9 <- gsub("gene_id \"", "",gtf_genes$V9 ) %>% + gsub("\"; gene_version \"", ";", .) %>% + gsub("\"; gene_name \"", ";", .) %>% + gsub("\"; gene_source \"", ";", .) %>% + gsub("\"; gene_biotype \"", ";", .) %>% + gsub("\"", "", .) + +gtf_genes[, c("gene_id", "gene_version", "gene_name", "gene_source", "gene_biotype") := data.table(str_split_fixed(V9,";", 5))] + + +X_chromosome_genes <- gtf_genes[V1 == "X"] +X_genelist <- X_chromosome_genes$gene_id[X_chromosome_genes$gene_id %in% genes] +Y_chromosome_genes <- gtf_genes[V1 == "Y"] +Y_genelist <- Y_chromosome_genes$gene_id[Y_chromosome_genes$gene_id %in% genes] +MT_chromosome_genes <- gtf_genes[V1 == "MT"] +MT_genelist <- MT_chromosome_genes$gene_id[MT_chromosome_genes$gene_id %in% genes] +RbGeneList <- read.delim(file = "/directflow/SCCGGroupShare/projects/DrewNeavin/References/RibosomalGeneList_GeneID_ENSG.txt") +Rb_genelist <- RbGeneList$ENSG[RbGeneList$ENSG %in% genes] + + +### Make stacked bar plots of the variance explained by different factors for these gene groups + + + + +## Figure of x chromosome genes ## +icc_x <- icc_dt[data.table(gene = icc_dt[grp == "Residual"][gene %in% X_genelist][order(percent_round)]$gene), on = "gene"] +icc_x$grp <- factor(icc_x$grp, levels = rev(vars)) +icc_x$gene <- factor(icc_x$gene, levels = unique(icc_x$gene)) + +bar_proportions_x <- ggplot(icc_x, aes(x = gene, y = percent, fill = grp)) + + geom_bar(position="stack", stat="identity", alpha = 0.75) + + theme_classic() + + theme(axis.title.x=element_blank(), + axis.text.x=element_blank(), + axis.ticks.x=element_blank(), + plot.title = element_text(hjust = 0.5)) + + scale_fill_manual(values = var_colors) + + ggtitle("Variance Explained of\nX Chromosome Genes") + + +ggsave(bar_proportions_x, filename = paste0(outdir, "variance_explained_bar_x_genes.png"), width = 20) + + +## Figure of y chromosome genes ## +icc_y <- icc_dt[data.table(gene = icc_dt[grp == "Residual"][gene %in% Y_genelist][order(percent_round)]$gene), on = "gene"] +icc_y$grp <- factor(icc_y$grp, levels = rev(vars)) +icc_y$gene <- factor(icc_y$gene, levels = unique(icc_y$gene)) + + +bar_proportions_y <- ggplot(icc_y, aes(x = gene, y = percent, fill = grp)) + + geom_bar(position="stack", stat="identity", alpha = 0.75) + + theme_classic() + + theme(axis.title.x=element_blank(), + axis.text.x=element_blank(), + axis.ticks.x=element_blank(), + plot.title = element_text(hjust = 0.5)) + + scale_fill_manual(values = var_colors) + + scale_y_continuous(expand = c(0, 0)) + + ggtitle("Variance Explained of\nY Chromosome Genes") + + +ggsave(bar_proportions_y, filename = paste0(outdir, "variance_explained_bar_y_genes.png"), width = 5) +ggsave(bar_proportions_y, filename = paste0(outdir, "variance_explained_bar_y_genes.pdf"), width = 5) + + + +## Figure of mt chromosome genes ## +icc_mt <- icc_dt[data.table(gene = icc_dt[grp == "Residual"][gene %in% MT_genelist][order(percent_round)]$gene), on = "gene"] +icc_mt$grp <- factor(icc_mt$grp, levels = rev(vars)) +icc_mt$gene <- factor(icc_mt$gene, levels = unique(icc_mt$gene)) + + +bar_proportions_mt <- ggplot(icc_mt, aes(x = gene, y = percent, fill = grp)) + + geom_bar(position="stack", stat="identity", alpha = 0.75) + + theme_classic() + + theme(axis.title.x=element_blank(), + axis.text.x=element_blank(), + axis.ticks.x=element_blank(), + plot.title = element_text(hjust = 0.5)) + + scale_fill_manual(values = var_colors) + + scale_y_continuous(expand = c(0, 0)) + + ggtitle("Variance Explained of\nMitochondrial Genes") + +ggsave(bar_proportions_mt, filename = paste0(outdir, "variance_explained_bar_mt_genes.png"), width = 4.5) +ggsave(bar_proportions_mt, filename = paste0(outdir, "variance_explained_bar_mt_genes.pdf"), width = 4.5) + + + +## Figure of mt chromosome genes ## +icc_rb <- icc_dt[data.table(gene = icc_dt[grp == "Residual"][gene %in% Rb_genelist][order(percent_round)]$gene), on = "gene"] +icc_rb$grp <- factor(icc_rb$grp, levels = rev(vars)) +icc_rb$gene <- factor(icc_rb$gene, levels = unique(icc_rb$gene)) + + +bar_proportions_rb <- ggplot(icc_rb, aes(x = gene, y = percent, fill = grp)) + + geom_bar(position="stack", stat="identity", alpha = 0.75) + + theme_classic() + + theme(axis.title.x=element_blank(), + axis.text.x=element_blank(), + axis.ticks.x=element_blank(), + plot.title = element_text(hjust = 0.5)) + + scale_fill_manual(values = var_colors) + + scale_y_continuous(expand = c(0, 0)) + + ggtitle("Variance Explained\nof Ribosomal Genes") + +ggsave(bar_proportions_rb, filename = paste0(outdir, "variance_explained_bar_rb_genes.png"), width = 10) + + + +### Plot Pluripotency Genes ### +pluri_genes <- fread(paste0(dir,"data/pluripotency_genes.tsv"), sep = "\t", col.names = "Gene_ID") + + +pluri_genes <- GeneConversion[pluri_genes, on = "Gene_ID"] + + +icc_dt_pluri_genes <- icc_dt[pluri_genes,on = c("gene", "Gene_ID")] +icc_dt_pluri_genes$grp <- factor(icc_dt_pluri_genes$grp, levels = rev(vars)) +icc_dt_pluri_genes <- icc_dt_pluri_genes[data.table(gene = icc_dt_pluri_genes[grp == "Residual"][order(percent)]$gene), on = "gene"] +icc_dt_pluri_genes$Gene_ID <- factor(icc_dt_pluri_genes$Gene_ID, levels = unique(icc_dt_pluri_genes$Gene_ID)) + + + +pPluri_Genes_Cont <- ggplot() + + geom_bar(data = icc_dt_pluri_genes, aes(Gene_ID, percent, fill = grp), position = "stack", stat = "identity", alpha = 0.75) + + theme_classic() + + # facet_wrap(Gene_ID ~ ., nrow = 3) + + scale_fill_manual(values = var_colors) + + theme(axis.text.x = element_text(size = 12, angle = 45, hjust = 1)) + + ylab("Percent Gene Expression Variance Explained") + + theme(axis.title.x=element_blank(), + legend.position="bottom") + +ggsave(pPluri_Genes_Cont, filename = paste0(outdir, "Pluripotent_Gene_Variable_Contributions.png"), width = 20, height = 12) + + + +### Write interaction genes out for rerunning Line:Village genes to see if significant on their own without interaction ### +icc_dt_vilXline <- icc_dt[grp == "Village:Line"] + +fwrite(icc_dt_vilXline$gene, paste0(outdir, "villageXline.tsv"), sep = "\t") + + + + +# ### Count number of each chromosome/gene category type +# ### numbers are the numbers of that category that where a significant percent of variance is explained by this variable +# ### percent of that category that where a significant percent of variance is explained by this variable + +# x_number <- lapply(genes_list, function(x){ +# length(which(x %in% X_chromosome_genes$gene_id)) +# }) + +# x_percent <- lapply(genes_list, function(x){ +# length(which(x %in% X_chromosome_genes$gene_id))/length(X_chromosome_genes$gene_id) +# }) + +# y_number <- lapply(genes_list, function(x){ +# length(which(x %in% Y_chromosome_genes$gene_id)) +# }) + +# y_percent <- lapply(genes_list, function(x){ +# length(which(x %in% Y_chromosome_genes$gene_id))/length(Y_chromosome_genes$gene_id) +# }) + +# mt_number <- lapply(genes_list, function(x){ +# length(which(x %in% MT_chromosome_genes$gene_id)) +# }) + +# mt_percent <- lapply(genes_list, function(x){ +# length(which(x %in% MT_chromosome_genes$gene_id))/length(MT_chromosome_genes$gene_id) +# }) + +# rb_number <- lapply(genes_list, function(x){ +# length(which(x %in% RbGeneList$ENSG)) +# }) + +# rb_percent <- lapply(genes_list, function(x){ +# length(which(x %in% RbGeneList$ENSG))/length(RbGeneList$ENSG) +# }) + + + +# ### for > 1% var explained +# ### Count number of each chromosome/gene category type +# x_number_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% X_chromosome_genes$gene_id)) +# }) +# names(x_number_1) <- vars + +# x_percent_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% X_chromosome_genes$gene_id))/length(X_chromosome_genes$gene_id) +# }) +# names(x_percent_1) <- vars + +# y_number_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% Y_chromosome_genes$gene_id)) +# }) +# names(y_number_1) <- vars + +# y_percent_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% Y_chromosome_genes$gene_id))/length(Y_chromosome_genes$gene_id) +# }) +# names(y_percent_1) <- vars + +# mt_number_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% MT_chromosome_genes$gene_id)) +# }) +# names(mt_number_1) <- vars + +# mt_percent_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% MT_chromosome_genes$gene_id))/length( MT_chromosome_genes$gene_id) +# }) +# names(mt_percent_1) <- vars + +# rb_number_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% RbGeneList$ENSG)) +# }) +# names(rb_number_1) <- vars + +# rb_percent_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% RbGeneList$ENSG))/length(RbGeneList$ENSG) +# }) +# names(rb_percent_1) <- vars + + +### Pathway analysis ### +geneList <- lapply(genes_list, function(x){ + tmp <- bitr(x, fromType = "ENSEMBL", + toType = c("ENTREZID"), + OrgDb = org.Hs.eg.db)$ENTREZID + tmp[!is.na(tmp)] +}) + + +gg <- list() +kk <- list() + + + +df = as.data.frame(org.Hs.egGO) +go_gene_list = unique(sort(df$gene_id)) + +dfk = as.data.frame(org.Hs.egPATH) +kegg_gene_list = unique(sort(dfk$gene_id)) + + + +for (group in c("Line", "Village", "Site", "Replicate","Village:Line", "Line:Site", "Village:Site", "Replicate:Village", "Replicate:Line", "Replicate:Site", "Residual")){ + kk[[group]] <- enrichKEGG(gene = geneList[[group]], + universe = geneList[[group]], + organism = 'hsa', + pvalueCutoff = 0.05, + keyType = 'ncbi-geneid') + + gg[[group]] <- groupGO(gene = geneList[[group]], + OrgDb = org.Hs.eg.db, + readable = TRUE) + +} + + +hsGO <- godata('org.Hs.eg.db', ont="MF") + + +sim_results <- list() + +vars <- c("Line", "Village", "Site", "Replicate","Village:Line", "Line:Site", "Village:Site", "Replicate:Village", "Replicate:Line", "Replicate:Site") + +for (group1 in vars){ + print(group1) + for (group2 in vars[(grep(paste0("^",group1, "$"), vars) + 1): length(vars)]){ + print(group2) + sim_results[[group1]][[group2]] <- clusterSim(geneList[[group1]], geneList[[group2]], semData=hsGO, measure="Wang", combine="BMA") + } +} + + + + + +# genes2rerun <- c(character()) + +# for (g in unique(icc_dt$gene)){ +# print(g) +# genes2rerun <- c(genes2rerun, as.character(unique(icc_dt[gene == g][P > 0.05/(nrow(icc_dt[gene == g])-1)]$gene))) +# } + + +# for (gene in genes2rerun){ +# print(gene) +# # unlink(paste0(icc_dir,gene,"_icc.rds")) +# print(file.exists(paste0(icc_dir,gene,"_icc.rds"))) +# unlink(paste0("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/",gene,"_fitted_models.rds")) +# unlink(paste0("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/residuals4qtl/",gene,"_residuals4qtl.rds")) +# } + + diff --git a/Variance/post_review/variance_partition_post_review_snake.sh b/Variance/post_review/variance_partition_post_review_snake.sh new file mode 100644 index 0000000..311906d --- /dev/null +++ b/Variance/post_review/variance_partition_post_review_snake.sh @@ -0,0 +1,108 @@ + + +SNAKEFILE="/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/scripts/Variance/post_review/variance_partition_post_review.smk" +LOG="/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/logs/" + +mkdir -p $LOG + +snakemake \ + --snakefile $SNAKEFILE \ + --dryrun \ + --cores 1 \ + --quiet + + +snakemake \ + --snakefile $SNAKEFILE \ + --dryrun \ + --cores 1 \ + --reason > jobs2run.txt + + + +nohup \ + snakemake \ + --snakefile $SNAKEFILE \ + --jobs 100 \ + --use-singularity \ + --restart-times 1 \ + --keep-going \ + --cluster \ + "qsub -S /bin/bash \ + -q short.q \ + -r yes \ + -pe smp {threads} \ + -l tmp_requested={resources.disk_per_thread_gb}G \ + -l mem_requested={resources.mem_per_thread_gb}G \ + -e $LOG \ + -o $LOG \ + -j y \ + -V" \ + > $LOG/nohup_`date +%Y-%m-%d.%H:%M:%S`.log & + + +snakemake \ + --snakefile $SNAKEFILE \ + --dryrun \ + --cores 1 \ + --quiet \ + --unlock + + +snakemake \ + --snakefile $SNAKEFILE \ + --dryrun \ + --cores 1 \ + --quiet \ + --cleanup-metadata \ + /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000116001_icc.rds \ + /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000116001_fitted_models.rds \ + /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000084112_icc.rds \ + /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000084112_fitted_models.rds \ + /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000130706_icc.rds \ + /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000130706_fitted_models.rds + + + + + + +ENSG00000140481 +ENSG00000158552 +ENSG00000167004 +ENSG00000184281 +ENSG00000185437 +ENSG00000185875 +ENSG00000196109 +ENSG00000197536 +ENSG00000215910 +ENSG00000215883 +ENSG00000258297 +ENSG00000259488 +ENSG00000274877 + + +ENSG00000158555 +ENSG00000167005 +ENSG00000184292 +ENSG00000184281 +ENSG00000185437 +ENSG00000185875 +ENSG00000196109 +ENSG00000197536 +ENSG00000215866 +ENSG00000258289 +ENSG00000259485 +ENSG00000274828 + + +rm ENSG00000167011_fitted_models.rds +rm ENSG00000184304_fitted_models.rds +rm ENSG00000185477_fitted_models.rds +rm ENSG00000185900_fitted_models.rds +rm ENSG00000196132_fitted_models.rds +rm ENSG00000197566_fitted_models.rds +rm ENSG00000217930_fitted_models.rds +rm ENSG00000258593_fitted_models.rds +rm ENSG00000259715_fitted_models.rds +rm ENSG00000275074_fitted_models.rds diff --git a/Variance/post_review/villageXline_testing.R b/Variance/post_review/villageXline_testing.R new file mode 100644 index 0000000..87c22c1 --- /dev/null +++ b/Variance/post_review/villageXline_testing.R @@ -0,0 +1,94 @@ +library(data.table) +library(Seurat) +library(pkgcond) +library(glmmTMB) + + + +### Set up directories and variables ### +args <- commandArgs(trailingOnly = TRUE) +icc_outdir <- paste0(args[1]) +model_outdir <- paste0(args[2]) +resid_outdir <- paste0(args[3]) +ensg <- as.character(args[4]) + +print(icc_outdir) +print(model_outdir) +print(resid_outdir) +print(ensg) + + + +### Read in data ### +seurat <- readRDS("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds") +icc_dt <- fread("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/combined/sig_results.tsv.gz", sep = "\t") + + + +### Process counts ### +## Subset non-cryo +seurat@meta.data$Location <- gsub("_Baseline", "", seurat@meta.data$Location) %>% gsub("_Village.+", "", .) %>% gsub("Thawed", "Cryopreserved",.) +seurat@meta.data$Time <- gsub("Thawed Village Day 0", "Baseline", seurat@meta.data$Time) %>% gsub("Thawed Village Day 7", "Village", .) %>% gsub(" Day 4", "", .) + +seurat <- subset(seurat, subset = Location != "Sydney_Cryopreserved") + + + + + +## Subset village and non-village +seurat_village <- subset(seurat, subset = Time == "Village") +seurat_nonvillage <- subset(seurat, subset = Time == "Baseline") + +vars <- icc_dt[gene == ensg]$grp +vars <- vars[!(vars %in% c("Village:Line", "Residual"))] +vars <- gsub("Village:","", vars) %>% gsub(":Village", "", .) + + +### Make DF for modeling ### +df_village <- data.frame("Expression" = seurat_village[["SCT"]]@data[gene,], "Line" = seurat_village@meta.data$Final_Assignment, "Replicate" = as.factor(gsub("[A-Z][a-z]+", "", seurat_village@meta.data$MULTI_ID)), "Site" = seurat_village$Location) +colnames(df_village)[1] <- "Expression" + +df_nonvillage <- data.frame("Expression" = seurat_nonvillage[["SCT"]]@data[gene,], "Line" = seurat_nonvillage@meta.data$Final_Assignment, "Replicate" = as.factor(gsub("[A-Z][a-z]+", "", seurat_nonvillage@meta.data$MULTI_ID)), "Site" = seurat_nonvillage$Location) +colnames(df_nonvillage)[1] <- "Expression" + + + +### 1. Fit significant variables except line effect ### +model1 <- as.formula(paste0("Expression ~ ", paste0(vars, collapse = " + "))) + +# model_all <- as.formula(paste0("Expression ~ (1|", paste0(vars, collapse = ") + (1|"), ")")) +# model_test <- suppress_warnings(glmmTMB(formula = noquote(model_all), data = df_village, REML = TRUE), "giveCsparse") +# model_test2 <- suppress_warnings(glmmTMB(formula = noquote(model_all), data = df_nonvillage, REML = TRUE), "giveCsparse") + +# icc_glmmtmb(model_test) +# icc_glmmtmb(model_test2) + + +model_village <- suppress_warnings(glmmTMB(formula = noquote(model1), data = df_village, REML = TRUE), "giveCsparse") +model_nonvillage <- suppress_warnings(glmmTMB(formula = noquote(model1), data = df_nonvillage, REML = TRUE), "giveCsparse") + + + +### 2. Fit residuals with Line ### +df_village$resid <- resid(model_village) +df_nonvillage$resid <- resid(model_nonvillage) + +model_resid_village <- suppress_warnings(glmmTMB(resid ~ Line, data = df_village, REML = TRUE), "giveCsparse") +model_resid_nonvillage <- suppress_warnings(glmmTMB(resid ~ Line, data = df_nonvillage, REML = TRUE), "giveCsparse") + + + +### 3. Capture beta of village and non-village in matrix ### +results <- data.table(Gene = gene, + beta_Village = , + beta_Nonvillage = , + LRT_Village = , + LRT_Nonvillage =) + + +### LRT between no line and line effect and add to table ### + + + +### Write out table ### diff --git a/Variance/post_review2/jobs2run.txt b/Variance/post_review2/jobs2run.txt new file mode 100644 index 0000000..1c72762 --- /dev/null +++ b/Variance/post_review2/jobs2run.txt @@ -0,0 +1,789 @@ +Building DAG of jobs... +Job counts: + count jobs + 1 all + 77 partition_variance + 78 + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000276075_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000276075_fitted_models.rds + jobid: 11596 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000276075_fitted_models.rds + wildcards: gene=ENSG00000276075 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000159899_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000159899_fitted_models.rds + jobid: 7204 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000159899_fitted_models.rds + wildcards: gene=ENSG00000159899 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000149403_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000149403_fitted_models.rds + jobid: 8444 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000149403_fitted_models.rds + wildcards: gene=ENSG00000149403 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000106546_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000106546_fitted_models.rds + jobid: 5381 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000106546_fitted_models.rds + wildcards: gene=ENSG00000106546 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000125846_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000125846_fitted_models.rds + jobid: 13022 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000125846_fitted_models.rds + wildcards: gene=ENSG00000125846 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000164031_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000164031_fitted_models.rds + jobid: 3619 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000164031_fitted_models.rds + wildcards: gene=ENSG00000164031 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000108669_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000108669_fitted_models.rds + jobid: 12601 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000108669_fitted_models.rds + wildcards: gene=ENSG00000108669 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000155275_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000155275_fitted_models.rds + jobid: 3386 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000155275_fitted_models.rds + wildcards: gene=ENSG00000155275 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000198055_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000198055_fitted_models.rds + jobid: 4471 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000198055_fitted_models.rds + wildcards: gene=ENSG00000198055 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000184208_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000184208_fitted_models.rds + jobid: 14760 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000184208_fitted_models.rds + wildcards: gene=ENSG00000184208 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000180089_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000180089_fitted_models.rds + jobid: 14361 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000180089_fitted_models.rds + wildcards: gene=ENSG00000180089 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000112079_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000112079_fitted_models.rds + jobid: 4846 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000112079_fitted_models.rds + wildcards: gene=ENSG00000112079 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000175309_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000175309_fitted_models.rds + jobid: 4487 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000175309_fitted_models.rds + wildcards: gene=ENSG00000175309 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000062822_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000062822_fitted_models.rds + jobid: 14266 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000062822_fitted_models.rds + wildcards: gene=ENSG00000062822 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000136883_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000136883_fitted_models.rds + jobid: 7428 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000136883_fitted_models.rds + wildcards: gene=ENSG00000136883 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000110171_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000110171_fitted_models.rds + jobid: 7752 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000110171_fitted_models.rds + wildcards: gene=ENSG00000110171 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000233396_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000233396_fitted_models.rds + jobid: 866 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000233396_fitted_models.rds + wildcards: gene=ENSG00000233396 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000128585_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000128585_fitted_models.rds + jobid: 5864 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000128585_fitted_models.rds + wildcards: gene=ENSG00000128585 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000119917_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000119917_fitted_models.rds + jobid: 8822 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000119917_fitted_models.rds + wildcards: gene=ENSG00000119917 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000140961_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000140961_fitted_models.rds + jobid: 11717 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000140961_fitted_models.rds + wildcards: gene=ENSG00000140961 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000087157_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000087157_fitted_models.rds + jobid: 12600 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000087157_fitted_models.rds + wildcards: gene=ENSG00000087157 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000138496_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000138496_fitted_models.rds + jobid: 2983 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000138496_fitted_models.rds + wildcards: gene=ENSG00000138496 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000153237_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000153237_fitted_models.rds + jobid: 2117 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000153237_fitted_models.rds + wildcards: gene=ENSG00000153237 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000082068_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000082068_fitted_models.rds + jobid: 3945 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000082068_fitted_models.rds + wildcards: gene=ENSG00000082068 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000108262_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000108262_fitted_models.rds + jobid: 12093 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000108262_fitted_models.rds + wildcards: gene=ENSG00000108262 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000261884_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000261884_fitted_models.rds + jobid: 11612 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000261884_fitted_models.rds + wildcards: gene=ENSG00000261884 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000128346_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000128346_fitted_models.rds + jobid: 14694 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000128346_fitted_models.rds + wildcards: gene=ENSG00000128346 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000204859_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000204859_fitted_models.rds + jobid: 88 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000204859_fitted_models.rds + wildcards: gene=ENSG00000204859 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000080986_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000080986_fitted_models.rds + jobid: 12698 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000080986_fitted_models.rds + wildcards: gene=ENSG00000080986 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000167487_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000167487_fitted_models.rds + jobid: 13776 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000167487_fitted_models.rds + wildcards: gene=ENSG00000167487 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000019505_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000019505_fitted_models.rds + jobid: 7904 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000019505_fitted_models.rds + wildcards: gene=ENSG00000019505 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000169155_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000169155_fitted_models.rds + jobid: 7481 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000169155_fitted_models.rds + wildcards: gene=ENSG00000169155 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000225885_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000225885_fitted_models.rds + jobid: 6935 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000225885_fitted_models.rds + wildcards: gene=ENSG00000225885 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000203739_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000203739_fitted_models.rds + jobid: 1149 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000203739_fitted_models.rds + wildcards: gene=ENSG00000203739 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000162426_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000162426_fitted_models.rds + jobid: 98 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000162426_fitted_models.rds + wildcards: gene=ENSG00000162426 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000111450_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000111450_fitted_models.rds + jobid: 9822 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000111450_fitted_models.rds + wildcards: gene=ENSG00000111450 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000157637_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000157637_fitted_models.rds + jobid: 12629 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000157637_fitted_models.rds + wildcards: gene=ENSG00000157637 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000204044_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000204044_fitted_models.rds + jobid: 13200 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000204044_fitted_models.rds + wildcards: gene=ENSG00000204044 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000068971_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000068971_fitted_models.rds + jobid: 8075 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000068971_fitted_models.rds + wildcards: gene=ENSG00000068971 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000021762_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000021762_fitted_models.rds + jobid: 7732 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000021762_fitted_models.rds + wildcards: gene=ENSG00000021762 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000146802_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000146802_fitted_models.rds + jobid: 5799 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000146802_fitted_models.rds + wildcards: gene=ENSG00000146802 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000143437_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000143437_fitted_models.rds + jobid: 918 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000143437_fitted_models.rds + wildcards: gene=ENSG00000143437 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000225675_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000225675_fitted_models.rds + jobid: 563 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000225675_fitted_models.rds + wildcards: gene=ENSG00000225675 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000141384_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000141384_fitted_models.rds + jobid: 12770 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000141384_fitted_models.rds + wildcards: gene=ENSG00000141384 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000187097_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000187097_fitted_models.rds + jobid: 10413 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000187097_fitted_models.rds + wildcards: gene=ENSG00000187097 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000274897_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000274897_fitted_models.rds + jobid: 7702 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000274897_fitted_models.rds + wildcards: gene=ENSG00000274897 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000277075_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000277075_fitted_models.rds + jobid: 4641 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000277075_fitted_models.rds + wildcards: gene=ENSG00000277075 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000075539_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000075539_fitted_models.rds + jobid: 3471 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000075539_fitted_models.rds + wildcards: gene=ENSG00000075539 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000066422_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000066422_fitted_models.rds + jobid: 2909 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000066422_fitted_models.rds + wildcards: gene=ENSG00000066422 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000163517_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000163517_fitted_models.rds + jobid: 2530 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000163517_fitted_models.rds + wildcards: gene=ENSG00000163517 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000229525_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000229525_fitted_models.rds + jobid: 2367 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000229525_fitted_models.rds + wildcards: gene=ENSG00000229525 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000163947_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000163947_fitted_models.rds + jobid: 2820 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000163947_fitted_models.rds + wildcards: gene=ENSG00000163947 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000259291_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000259291_fitted_models.rds + jobid: 11025 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000259291_fitted_models.rds + wildcards: gene=ENSG00000259291 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000204314_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000204314_fitted_models.rds + jobid: 4770 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000204314_fitted_models.rds + wildcards: gene=ENSG00000204314 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000273148_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000273148_fitted_models.rds + jobid: 13029 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000273148_fitted_models.rds + wildcards: gene=ENSG00000273148 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000277597_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000277597_fitted_models.rds + jobid: 11813 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000277597_fitted_models.rds + wildcards: gene=ENSG00000277597 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000172943_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000172943_fitted_models.rds + jobid: 6183 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000172943_fitted_models.rds + wildcards: gene=ENSG00000172943 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000189180_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000189180_fitted_models.rds + jobid: 8633 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000189180_fitted_models.rds + wildcards: gene=ENSG00000189180 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000258457_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000258457_fitted_models.rds + jobid: 10147 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000258457_fitted_models.rds + wildcards: gene=ENSG00000258457 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000213859_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000213859_fitted_models.rds + jobid: 11912 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000213859_fitted_models.rds + wildcards: gene=ENSG00000213859 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000137843_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000137843_fitted_models.rds + jobid: 10655 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000137843_fitted_models.rds + wildcards: gene=ENSG00000137843 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000164938_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000164938_fitted_models.rds + jobid: 6868 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000164938_fitted_models.rds + wildcards: gene=ENSG00000164938 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000143363_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000143363_fitted_models.rds + jobid: 923 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000143363_fitted_models.rds + wildcards: gene=ENSG00000143363 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000133627_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000133627_fitted_models.rds + jobid: 5980 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000133627_fitted_models.rds + wildcards: gene=ENSG00000133627 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000103642_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000103642_fitted_models.rds + jobid: 10808 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000103642_fitted_models.rds + wildcards: gene=ENSG00000103642 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000100626_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000100626_fitted_models.rds + jobid: 10378 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000100626_fitted_models.rds + wildcards: gene=ENSG00000100626 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000166266_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000166266_fitted_models.rds + jobid: 8351 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000166266_fitted_models.rds + wildcards: gene=ENSG00000166266 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000067177_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000067177_fitted_models.rds + jobid: 6249 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000067177_fitted_models.rds + wildcards: gene=ENSG00000067177 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000081189_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000081189_fitted_models.rds + jobid: 4112 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000081189_fitted_models.rds + wildcards: gene=ENSG00000081189 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000177875_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000177875_fitted_models.rds + jobid: 9313 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000177875_fitted_models.rds + wildcards: gene=ENSG00000177875 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000164089_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000164089_fitted_models.rds + jobid: 3652 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000164089_fitted_models.rds + wildcards: gene=ENSG00000164089 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000130703_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000130703_fitted_models.rds + jobid: 13284 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000130703_fitted_models.rds + wildcards: gene=ENSG00000130703 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000077463_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000077463_fitted_models.rds + jobid: 13446 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000077463_fitted_models.rds + wildcards: gene=ENSG00000077463 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000145868_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000145868_fitted_models.rds + jobid: 4350 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000145868_fitted_models.rds + wildcards: gene=ENSG00000145868 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000138686_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000138686_fitted_models.rds + jobid: 3691 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000138686_fitted_models.rds + wildcards: gene=ENSG00000138686 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000260879_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000260879_fitted_models.rds + jobid: 749 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000260879_fitted_models.rds + wildcards: gene=ENSG00000260879 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/ENSG00000148942_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000148942_fitted_models.rds + jobid: 7846 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000148942_fitted_models.rds + wildcards: gene=ENSG00000148942 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Mon Apr 18 07:13:03 2022] +localrule all: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000279457_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000228463_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000237491_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000225880_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000230368_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000187634_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000188976_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000187961_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000187583_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000188290_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000187608_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000188157_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000131591_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000186891_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000078808_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000176022_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000184163_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000160087_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000162572_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000131584_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000169972_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000127054_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000224051_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000107404_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000162576_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000175756_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000221978_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000242485_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000272455_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000235098_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000179403_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000215915_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000160072_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000197785_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000205090_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000160075_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000215014_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000228594_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000272106_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000197530_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000189409_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000248333_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000189339_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000008128_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000215790_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000008130_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000078369_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000178821_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000187730_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000067606_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000182873_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000162585_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000157933_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000116151_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000157916_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000157911_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000157881_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000272449_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000157870_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000237058_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000130762_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000162591_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000158109_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000116213_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000078900_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000227372_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000235169_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000130764_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000116198_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000169598_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000198912_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000196581_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000131697_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000069424_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000116254_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000116251_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000158286_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000116237_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000225077_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000173673_fitted_models.rds, 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/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000130703_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000225675_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000198055_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000163517_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000128346_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000119917_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000203739_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000082068_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000149403_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000081189_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000110171_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000177875_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000068971_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000075539_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000204859_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000166266_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000145868_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000175309_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000140961_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000077463_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000172943_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000138686_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/ENSG00000258457_fitted_models.rds + +Job counts: + count jobs + 1 all + 77 partition_variance + 78 +This was a dry-run (flag -n). The order of jobs does not reflect the order of execution. diff --git a/Variance/post_review2/variance_partition_post_review.R b/Variance/post_review2/variance_partition_post_review.R new file mode 100644 index 0000000..ab660fd --- /dev/null +++ b/Variance/post_review2/variance_partition_post_review.R @@ -0,0 +1,376 @@ +library(haven) +library(ggplot2) +library(glmmTMB) +library(Seurat) +library(tidyverse) +library(specr) +library(data.table) +library(dsLib) +library(pkgcond) +library(texreg) + + +inicio("Starting Analysis") + + +##### Define functions ##### +icc_glmmtmb <- function(model, percent = TRUE) { + tmp <- VarCorr(model) + var <- do.call(rbind, lapply(names(tmp$cond), function(x) data.table("grp" = x, "vcov" = attr(tmp$cond[[x]], "stddev")^2))) + var <- rbind(var, data.table("grp" = "Residual", "vcov" = sigma(model)^2)) + sum_var <- sum(var$vcov) + var <- var %>% dplyr::mutate(icc = vcov/sum_var) + if (isTRUE(percent)) { + var <- var %>% dplyr::mutate(percent = .data$icc * 100) + } + return(var) +} + + + +##### Bring in variables ##### +### Bring in arguments +args <- commandArgs(trailingOnly = TRUE) +icc_interaction_outdir <- paste0(args[1]) +icc_outdir <- paste0(args[2]) +model_interaction_outdir <- paste0(args[3]) +model_outdir <- paste0(args[4]) +resid_outdir <- paste0(args[5]) +gene <- as.character(args[6]) + +print(icc_outdir) +print(icc_outdir) +print(model_outdir) +print(resid_outdir) +print(gene) + + + +##### Read in seurat with genes ##### +seurat <- readRDS("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/seurat_integrated_noncryo_1pct_expressing.rds") + + +### Make DF for modeling ### +df_hier_unscale <- data.frame("Expression" = seurat[["SCT"]]@scale.data[gene,], "Village" = as.factor(ifelse(seurat@meta.data$Time == "Baseline", 0, 1)), "Line" = seurat@meta.data$Final_Assignment, "Replicate" = as.factor(gsub("[A-Z][a-z]+", "", seurat@meta.data$MULTI_ID)), "Site" = seurat$Location) +colnames(df_hier_unscale)[1] <- "Expression" + + + +##### Leave one out method ##### +variables <- c("Line", "Village", "Site", "Replicate") + +model_all <- as.formula(paste0("Expression ~ (1|", paste0(variables, collapse = ") + (1|"), ")")) + + +boolFalse<-F +while(boolFalse==F & length(variables) > 0){ + tryCatch({ + print(variables) + model_glmmtmb <- suppress_warnings(glmmTMB(formula = noquote(model_all), data = df_hier_unscale, REML = TRUE), "giveCsparse") + boolFalse<-T + },error=function(e){ + if (length(variables) > 1){ + variables <- variables[1:(length(variables) -1)] + } else { + variables <- c() + } + }) +} + + +if (!length(variables) == 0){ + + + ### Deal with singular fits by removing last variable until a fit can be found - ordered in variables buy importance + while (!model_glmmtmb$sdr$pdHess & length(variables) > 0 ){ + print("Singular fit: removing last variable and rerunning with one less covariate.") + if (length(variables) > 1){ + variables <- variables[1:(length(variables) -1)] + print(variables) + model_all <- as.formula(paste0("Expression ~ (1|", paste0(variables, collapse = ") + (1|"), ")")) + model_glmmtmb <- suppress_warnings(glmmTMB(formula = noquote(model_all), data = df_hier_unscale, REML = TRUE), "giveCsparse") + } else { + variables <- c() + } + } + + print(variables) + + if (length(variables) > 0){ + + model_loo <- list() + + icc <- data.table(grp = variables, P = as.numeric(NA)) + + for (variable in variables){ + print(variable) + if (length(variables) > 1){ + model <- as.formula(paste0("Expression ~ (1|", paste0(variables[!variables %in% variable], collapse = ") + (1|"), ")")) + } else { + model <- as.formula(paste0("Expression ~ 1")) + } + model_loo[[variable]] <- suppress_warnings(glmmTMB(formula = noquote(model), data = df_hier_unscale, REML = TRUE), "giveCsparse") + icc[grp == variable]$P <- anova(model_loo[[variable]], model_glmmtmb)$`Pr(>Chisq)`[2] + } + + + if (!(any(icc[grp != "Residual"]$P > 0.05/length(variables)) | any(is.na(icc[grp != "Residual"]$P)))){ + model_loo_updated <- model_loo + + updated_model <- as.formula(paste0("Expression ~ 1 + (1|", paste0(variables, collapse = ") + (1|"), ")")) + + model_loo_updated[["all"]] <- suppress_warnings(glmmTMB(formula = noquote(updated_model), data = df_hier_unscale, REML = TRUE), "giveCsparse") + + ### Calculate the variance explained by each of the included variables ### + icc <- icc_glmmtmb(model_loo_updated[["all"]]) + + + ### Recalculate significance ### + icc$P <- as.numeric(NA) + icc$gene <- gene + + for (variable in variables){ + print(variable) + if (length(variables) > 1){ + model <- as.formula(paste0("Expression ~ 1 + (1|", paste0(variables[!variables %in% variable], collapse = ") + (1|"), ")")) + } else { + model <- as.formula(paste0("Expression ~ 1")) + } + model_loo_updated[[variable]] <- suppress_warnings(glmmTMB(formula = noquote(model), data = df_hier_unscale, REML = TRUE), "giveCsparse") + icc[grp == variable]$P <- anova(model_loo_updated[[variable]], model_loo_updated[["all"]])$`Pr(>Chisq)`[2] + } + } + + + while((any(icc[grp != "Residual"]$P > 0.05/length(variables)) | any(is.na(icc[grp != "Residual"]$P)))){ + + print("Removing non-significant vartiables and retesting signficance") + + ##### Identify variables to keep ##### + variables <- icc[P < 0.05/length(variables)]$grp + + if (length(variables) > 0){ + + ##### Calculate full model ##### + updated_model <- as.formula(paste0("Expression ~ 1 + (1|", paste0(variables, collapse = ") + (1|"), ")")) + + + model_loo_updated <- list() + model_loo_updated[["all"]] <- suppress_warnings(glmmTMB(formula = noquote(updated_model), data = df_hier_unscale, REML = TRUE), "giveCsparse") + + + + ### Calculate the variance explained by each of the included variables ### + icc <- icc_glmmtmb(model_loo_updated[["all"]]) + + + + ### Recalfulate significance ### + icc$P <- as.numeric(NA) + icc$gene <- gene + + for (variable in variables){ + print(variable) + if (length(variables) > 1){ + model <- as.formula(paste0("Expression ~ 1 + (1|", paste0(variables[!variables %in% variable], collapse = ") + (1|"), ")")) + } else { + model <- as.formula(paste0("Expression ~ 1")) + } + model_loo_updated[[variable]] <- suppress_warnings(glmmTMB(formula = noquote(model), data = df_hier_unscale, REML = TRUE), "giveCsparse") + icc[grp == variable]$P <- anova(model_loo_updated[[variable]], model_loo_updated[["all"]])$`Pr(>Chisq)`[2] + } + + + + } else { + icc <- data.table(grp=character(), vcov=numeric(), icc=numeric(), percent=numeric(), P=numeric(), gene=character()) + model_loo_updated <- list() + } + } + + interaction_variables <- c() + + if (length(variables) > 1){ + ### Add in interactions of the significant variables + if ("Line" %in% variables & "Village" %in% variables){ + interaction_variables <- c(interaction_variables, "Line:Village") + } + if ("Line" %in% variables & "Site" %in% variables){ + interaction_variables <- c(interaction_variables, "Line:Site") + } + if ("Village" %in% variables & "Site" %in% variables){ + interaction_variables <- c(interaction_variables, "Village:Site") + } + if ("Replicate" %in% variables & "Village" %in% variables){ + interaction_variables <- c(interaction_variables, "Replicate:Village") + } + if ("Replicate" %in% variables & "Line" %in% variables){ + interaction_variables <- c(interaction_variables, "Replicate:Line") + } + if ("Replicate" %in% variables & "Site" %in% variables){ + interaction_variables <- c(interaction_variables, "Replicate:Site") + } + + + model_all_interaction <- as.formula(paste0("Expression ~ (1|", paste0(c(variables, interaction_variables), collapse = ") + (1|"), ")")) + + + boolFalse<-F + while(boolFalse==F & length(interaction_variables) > 0){ + tryCatch({ + print(c(variables, interaction_variables)) + model_glmmtmb_interaction <- suppress_warnings(glmmTMB(formula = noquote(model_all_interaction), data = df_hier_unscale, REML = TRUE), "giveCsparse") + boolFalse<-T + },error=function(e){ + if (length(interaction_variables) > 1){ + interaction_variables <- interaction_variables[1:(length(interaction_variables) -1)] + } else { + interaction_variables <- c() + } + }) + } + + ### Deal with singular fits by removing last variable until a fit can be found - ordered in variables buy importance + while (!model_glmmtmb_interaction$sdr$pdHess & length(interaction_variables) > 0 ){ + print("Singular fit: removing last variable and rerunning with one less covariate.") + if (length(interaction_variables) > 1){ + interaction_variables <- interaction_variables[1:(length(interaction_variables) -1)] + print(c(interaction_variables, variables)) + model_all_interaction <- as.formula(paste0("Expression ~ (1|", paste0(c(variables, interaction_variables), collapse = ") + (1|"), ")")) + model_glmmtmb_interaction <- suppress_warnings(glmmTMB(formula = noquote(model_all_interaction), data = df_hier_unscale, REML = TRUE), "giveCsparse") + } else { + interaction_variables <- c() + } + } + + if (length(interaction_variables) > 0){ + + model_loo_interaction <- list() + + icc_interaction <- data.table(grp = interaction_variables, P = as.numeric(NA)) + + for (variable in c(interaction_variables)){ + print(variable) + if (length(interaction_variables) > 1){ + model_interaction <- as.formula(paste0("Expression ~ (1|", paste0(c(variables, interaction_variables)[!c(variables, interaction_variables) %in% variable], collapse = ") + (1|"), ")")) + } else { + model_interaction <- as.formula(paste0("Expression ~ (1|", paste0(variables[!variables %in% variable], collapse = ") + (1|"), ")")) + } + model_loo_interaction[[variable]] <- suppress_warnings(glmmTMB(formula = noquote(model_interaction), data = df_hier_unscale, REML = TRUE), "giveCsparse") + icc_interaction[grp == variable]$P <- anova(model_loo_interaction[[variable]], model_glmmtmb_interaction)$`Pr(>Chisq)`[2] + } + + + if (!(any(icc_interaction[grp != "Residual"]$P > 0.05/length(c(variables, interaction_variables))) | any(is.na(icc_interaction[grp != "Residual"]$P)))){ + model_loo_interaction_updated <- model_loo_interaction + + updated_model_interaction <- as.formula(paste0("Expression ~ 1 + (1|", paste0(c(variables, interaction_variables), collapse = ") + (1|"), ")")) + + model_loo_interaction_updated[["all"]] <- suppress_warnings(glmmTMB(formula = noquote(updated_model_interaction), data = df_hier_unscale, REML = TRUE), "giveCsparse") + + ### Calculate the variance explained by each of the included variables ### + icc_interaction <- icc_glmmtmb(model_loo_interaction_updated[["all"]]) + + + ### Recalculate significance ### + icc_interaction$P <- as.numeric(NA) + icc_interaction$gene <- gene + + for (variable in c(variables, interaction_variables)){ + print(variable) + if (length(c(interaction_variables)) > 1){ + model <- as.formula(paste0("Expression ~ 1 + (1|", paste0(c(variables, interaction_variables)[!c(variables, interaction_variables) %in% variable], collapse = ") + (1|"), ")")) + } else { + model <- as.formula(paste0("Expression ~ (1|", paste0(variables[!variables %in% variable], collapse = ") + (1|"), ")")) + } + model_loo_interaction_updated[[variable]] <- suppress_warnings(glmmTMB(formula = noquote(model), data = df_hier_unscale, REML = TRUE), "giveCsparse") + icc_interaction[grp == variable]$P <- anova(model_loo_interaction_updated[[variable]], model_loo_interaction_updated[["all"]])$`Pr(>Chisq)`[2] + } + } + + + while((any(icc_interaction[!(grp %in% c("Residual", variables))]$P > 0.05/length(c(variables, interaction_variables))) | any(is.na(icc_interaction[!(grp %in%c("Residual", variables))]$P)))){ + + print("Removing non-significant vartiables and retesting signficance") + + ##### Identify variables to keep ##### + interaction_variables <- icc_interaction[!(grp %in% c("Residual", variables)) & P < 0.05/length(c(variables, interaction_variables))]$grp + + if (length(interaction_variables) > 0){ + + ##### Calculate full model ##### + updated_model_interaction <- as.formula(paste0("Expression ~ 1 + (1|", paste0(c(variables, interaction_variables), collapse = ") + (1|"), ")")) + + + model_loo_interaction_updated <- list() + model_loo_interaction_updated[["all"]] <- suppress_warnings(glmmTMB(formula = noquote(updated_model_interaction), data = df_hier_unscale, REML = TRUE), "giveCsparse") + + + + ### Calculate the variance explained by each of the included variables ### + icc_interaction <- icc_glmmtmb(model_loo_interaction_updated[["all"]]) + + + + ### Recalfulate significance ### + icc_interaction$P <- as.numeric(NA) + icc_interaction$gene <- gene + + for (variable in c(variables, interaction_variables)){ + print(variable) + model_interaction <- as.formula(paste0("Expression ~ 1 + (1|", paste0(c(variables, interaction_variables)[!(c(variables, interaction_variables) %in% variable)], collapse = ") + (1|"), ")")) + + model_loo_interaction_updated[[variable]] <- suppress_warnings(glmmTMB(formula = noquote(model_interaction), data = df_hier_unscale, REML = TRUE), "giveCsparse") + icc_interaction[grp == variable]$P <- anova(model_loo_interaction_updated[[variable]], model_loo_interaction_updated[["all"]])$`Pr(>Chisq)`[2] + } + } else { + icc_interaction <- data.table(grp=character(), vcov=numeric(), icc=numeric(), percent=numeric(), P=numeric(), gene=character()) + model_loo_interaction_updated <- list() + } + + if (nrow(icc_interaction) > nrow(icc)){ + saveRDS(icc_interaction, paste0(icc_interaction_outdir, gene, "_icc.rds"), compress = TRUE) + saveRDS(model_loo_interaction_updated, paste0(model_interaction_outdir, gene, "_fitted_models.rds"), compress = TRUE) + } + } + } else { + icc_interaction <- data.table(grp=character(), vcov=numeric(), icc=numeric(), percent=numeric(), P=numeric(), gene=character()) + model_loo_interaction_updated <- list() + } + + + ### If line is significant, then get residuals for downstream qtl checks ### + if ("Line" %in% variables){ + print("Making residuals for qtl detection") + if (length(variables) > 1){ + if (length(interaction_variables) > 0){ + model_no_line <- as.formula(paste0("Expression ~ (1|", paste0(c(variables, interaction_variables)[-grep("Line", c(variables, interaction_variables))], collapse = ") + (1|"), ")")) + } else { + model_no_line <- as.formula(paste0("Expression ~ (1|", paste0(variables[!variables %in% "Line"], collapse = ") + (1|"), ")")) + } + } else { + model_no_line <- as.formula(paste0("Expression ~ 1")) + } + fit_no_line <- glmmTMB(formula = noquote(model_no_line), data = df_hier_unscale, REML = TRUE) + residuals <- resid(fit_no_line) + saveRDS(residuals, paste0(resid_outdir, gene, "_residuals4qtl.rds"), compress = TRUE) + } + + } else { + icc <- data.table(grp=character(), vcov=numeric(), icc=numeric(), percent=numeric(), P=numeric(), gene=character()) + model_loo_updated <- list() + } + } else { + icc <- data.table(grp=character(), vcov=numeric(), icc=numeric(), percent=numeric(), P=numeric(), gene=character()) + model_loo_updated <- list() + } +} + + +saveRDS(icc, paste0(icc_outdir, gene, "_icc.rds"), compress = TRUE) +saveRDS(model_loo_updated, paste0(model_outdir, gene, "_fitted_models.rds"), compress = TRUE) + + + + +fin() \ No newline at end of file diff --git a/Variance/post_review2/variance_partition_post_review.smk b/Variance/post_review2/variance_partition_post_review.smk new file mode 100644 index 0000000..4713230 --- /dev/null +++ b/Variance/post_review2/variance_partition_post_review.smk @@ -0,0 +1,40 @@ +import pandas as pd + + +genes_file = "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/seurat_integrated_noncryo_1pct_expressing_genes.tsv" +genes = pd.read_csv(genes_file, sep = "\t") + + +rule all: + input: + expand("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/{gene}_fitted_models.rds", gene = genes.Gene) + + +rule partition_variance: + input: + seurat = "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds" + output: + "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/{gene}_icc.rds", + "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/{gene}_fitted_models.rds" + resources: + mem_per_thread_gb = lambda wildcards, attempt: attempt * 16, + disk_per_thread_gb = lambda wildcards, attempt: attempt * 16 + threads: 4 + params: + script = "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/scripts/Variance/post_review2/variance_partition_post_review.R", + out_icc="/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/", + out_model="/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/fit_models/", + out_resids="/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/residuals4qtl/", + out_icc_interaction = "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc_interaction/", + out_model_interaction = "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc_interaction/" + log: + shell: + """ + mkdir -p {params.out_icc_interaction} + mkdir -p {params.out_model_interaction} + mkdir -p {params.out_resids} + + /directflow/SCCGGroupShare/projects/DrewNeavin/software/anaconda3/envs/baseR402/bin/Rscript {params.script} {params.out_icc_interaction} {params.out_icc} {params.out_model_interaction} {params.out_model} {params.out_resids} {wildcards.gene} + """ + + diff --git a/Variance/post_review2/variance_partition_post_review_combine.R b/Variance/post_review2/variance_partition_post_review_combine.R new file mode 100644 index 0000000..5f9c3ce --- /dev/null +++ b/Variance/post_review2/variance_partition_post_review_combine.R @@ -0,0 +1,780 @@ +##### Reason: combine the results for the variance explained by different factors for each gene +##### Author: Drew Neavin +##### Date: 14 March, 2022 + + +##### Load in libraries ##### +library(data.table) +library(tidyverse) +library(ggridges) +library(raincloudplots) +library(ggdist) +library(clusterProfiler) +library(org.Hs.eg.db) +library(GOSemSim) +library(RColorBrewer) + + + +##### Set up directories ##### +dir <- "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/" +icc_dir <- "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc/" +icc_interaction_dir <- "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/icc_interaction/" +outdir <- "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/combined/" + +dir.create(outdir, recursive = TRUE) + + +vars <- c("Line", "Village", "Cryopreserved", "Site", "Replicate","Line:Village", "Line:Cryopreserved", "Line:Site", "Village:Cryopreserved","Village:Site", "Replicate:Village", "Replicate:Line","Replicate:Cryopreserved", "Replicate:Site", "Residual") +# var_colors <- c(colorRampPalette(brewer.pal(11, "Spectral"))(14), "grey90") +var_colors <- c("#4734a9", rev(c("#115cc7", "#a4c3c8", "#499090", "#405940", "#685a54", "#f7d312", "#f8bf33", "#e4910e", "#f65d19", "#931519", "#f2c1ce", "#e17aab", "#a186aa")), "gray90") +# var_colors <- c("#a2104d", "#fde64b", "#3e90c1", "#358856", "#f5764e", "#685ba6", "#728d01", "#abd302", "#8b6248", "#6ec4aa", "gray90") +names(var_colors) <- vars + +var_colors <- var_colors[c("Line", "Village", "Site", "Replicate","Line:Village", "Line:Site", "Village:Site", "Replicate:Village", "Replicate:Line", "Replicate:Site", "Residual")] + + + +##### Get list of icc files ##### +icc_files <- list.files(icc_dir) + + + +##### Read in icc results ##### +icc_results_list <- lapply(icc_files, function(x){ + readRDS(paste0(icc_dir,x)) +}) +names(icc_results_list) <- icc_files + + + +##### Get list of icc interaction files ##### +icc_interaction_files <- list.files(icc_interaction_dir, pattern = "_icc.rds") + + + +##### Read in icc results ##### +icc_interaction_results_list <- lapply(icc_interaction_files, function(x){ + readRDS(paste0(icc_interaction_dir,x)) +}) +names(icc_interaction_results_list) <- icc_interaction_files + + + +##### Merge icc results into a single data.table ##### +icc_dt <- do.call(rbind, icc_results_list) + +icc_dt$percent_round <- round(icc_dt$percent) + +icc_dt$grp <- factor(icc_dt$grp, levels= rev(c("Line", "Village", "Site", "Replicate","Line:Village", "Line:Site", "Village:Site", "Replicate:Village", "Replicate:Line", "Replicate:Site", "Residual"))) + +group_size <- data.table(table(icc_dt$grp)) +colnames(group_size) <- c("grp", "size") +group_size$grp_size <- paste0(group_size$grp, "\nN = ", group_size$size) + +icc_dt <- group_size[icc_dt, on = "grp"] +icc_dt$grp_size <- factor(icc_dt$grp_size, levels = unique(group_size$grp_size)) + + + + +##### Merge icc_interaction results into a single data.table ##### +icc_interaction_dt <- do.call(rbind, icc_interaction_results_list) + +icc_interaction_dt$percent_round <- round(icc_interaction_dt$percent) + +icc_interaction_dt$grp <- factor(icc_interaction_dt$grp, levels= rev(c("Line", "Village", "Site", "Replicate","Line:Village", "Line:Site", "Village:Site", "Replicate:Village", "Replicate:Line", "Replicate:Site", "Residual"))) + +group_size <- data.table(table(icc_interaction_dt$grp)) +colnames(group_size) <- c("grp", "size") +group_size$grp_size <- paste0(group_size$grp, "\nN = ", group_size$size) + +icc_interaction_dt <- group_size[icc_interaction_dt, on = "grp"] +icc_interaction_dt$grp_size <- factor(icc_interaction_dt$grp_size, levels = unique(group_size$grp_size)) + +### *** Need to add individual effects without interaction in to interaction dt *** ### +icc_interaction_plus_dt <- rbind(icc_interaction_dt, icc_dt[!(gene %in% icc_interaction_dt$gene)]) + + +group_size <- data.table(table(icc_interaction_plus_dt$grp)) +colnames(group_size) <- c("grp", "size") +group_size$grp_size <- paste0(group_size$grp, "\nN = ", group_size$size) + +icc_interaction_plus_dt <- group_size[icc_interaction_plus_dt, on = "grp"] +icc_interaction_plus_dt$grp_size <- factor(icc_interaction_plus_dt$grp_size, levels = unique(group_size$grp_size)) + + + +##### Check difference in percent explained with and without interactions ##### +icc_interaction_dt_joined <- icc_dt[icc_interaction_dt, on = c("grp", "gene")] + +icc_interaction_dt_joined$difference <- icc_interaction_dt_joined$percent - icc_interaction_dt_joined$i.percent + + + +pRaincloud_dif <- ggplot(icc_interaction_dt_joined, aes(x = difference, y = factor(grp_size, levels = rev(levels(grp_size))), fill = factor(grp, levels = rev(vars)))) + + geom_density_ridges(stat = "binline", bins = 90, scale = 0.7, draw_baseline = FALSE, aes(height =..ndensity..), alpha = 0.75) + + geom_boxplot(size = 0.5,width = .15, outlier.size = 0.25, position = position_nudge(y=-0.12), alpha = 0.75) + + coord_cartesian(xlim = c(1.2, NA), clip = "off") + + theme_classic() + + theme(axis.title.y=element_blank()) + + xlab("Percent Variance Explained") + + scale_y_discrete(expand = c(0.03, 0)) + + scale_fill_manual(values = var_colors) + +ggsave(pRaincloud_dif, filename = paste0(outdir, "variance_explained_interaction_difference_raincloud.png"), height = 8, width = 7) +ggsave(pRaincloud_dif, filename = paste0(outdir, "variance_explained_interaction_difference_raincloud.pdf"), height = 8, width = 7) + + + + +##### Make a figure of stacked variance explained ##### +### Order based on line variance explained ### +genes_list <- list() + +for (group in c("Line", "Village", "Site", "Replicate","Village:Line", "Line:Site", "Village:Site", "Replicate:Village", "Replicate:Line", "Replicate:Site", "Residual")){ + genes_list[[group]] <- icc_dt[grp == group][rev(order(percent_round))]$gene +} + +genes <- unique(unlist(genes_list)) + +icc_dt$gene <- factor(icc_dt$gene, levels = genes) + + + +## First on line percent, then village percent ## +bar_proportions <- ggplot(icc_dt, aes(x = gene, y = percent, fill = grp)) + + geom_bar(position="stack", stat="identity") + + theme_classic() + + theme(axis.title.x=element_blank(), + axis.text.x=element_blank(), + axis.ticks.x=element_blank()) + +ggsave(bar_proportions, filename = paste0(outdir, "variance_explained_bar.png"), width = 20) + + + +### Try boxplot ### +boxplot <- ggplot(icc_dt, aes(x = factor(grp, levels = rev(levels(grp))), y = percent, fill = factor(grp, levels = rev(levels(grp))), color = factor(grp, levels = rev(levels(grp))))) + + geom_boxplot(alpha = 0.5, size = 0.5) + + theme_classic() + + xlab("Covariate") + + theme(axis.text.x = element_text(angle = 90, vjust = 0.5, hjust=1), + legend.position="none") + +ggsave(boxplot, filename = paste0(outdir, "variance_explained_box.png"), height = 4, width = 5) + + +### Try ridgplots ### +pRidges <- ggplot(icc_dt[grp != "Residual"], aes(x = percent, y = factor(grp, levels = rev(levels(grp))), fill = factor(grp, levels = rev(levels(grp))))) + + geom_density_ridges(stat = "binline", bins = 200, scale = 0.95, draw_baseline = FALSE) + + # geom_density_ridges() + + theme_classic() + +ggsave(pRidges, filename = paste0(outdir, "variance_explained_ridge.png"), height = 8, width = 10) + +### Try ridgplots ### +pRidges_pop <- ggplot(icc_dt[grp != "Residual"][percent > 10], aes(x = percent, y = factor(grp, levels = rev(levels(grp))), fill = factor(grp, levels = rev(levels(grp))))) + + geom_density_ridges(stat = "binline", bins = 180, scale = 0.95, draw_baseline = FALSE) + + # geom_density_ridges() + + theme_classic() + +ggsave(pRidges_pop, filename = paste0(outdir, "variance_explained_ridge_pop.png"), height = 8, width = 10) + + + +pRaincloud <- ggplot(icc_dt, aes(x = percent, y = factor(grp_size, levels = rev(levels(grp_size))), fill = factor(grp, levels = rev(vars)))) + + geom_density_ridges(stat = "binline", bins = 90, scale = 0.7, draw_baseline = FALSE, aes(height =..ndensity..), alpha = 0.75) + + geom_boxplot(size = 0.5,width = .15, outlier.size = 0.25, position = position_nudge(y=-0.12), alpha = 0.75) + + coord_cartesian(xlim = c(1.2, NA), clip = "off") + + theme_classic() + + theme(axis.title.y=element_blank()) + + xlab("Percent Variance Explained") + + scale_y_discrete(expand = c(0.03, 0)) + + scale_fill_manual(values = var_colors) + +ggsave(pRaincloud, filename = paste0(outdir, "variance_explained_raincloud.png"), height = 8, width = 7) +ggsave(pRaincloud, filename = paste0(outdir, "variance_explained_raincloud.pdf"), height = 8, width = 7) + + +icc_interaction_plus_dt$grp_size <- factor(icc_interaction_plus_dt$grp_size, levels = c(unique(grep("^Line\nN = ", icc_interaction_plus_dt$grp_size, value = TRUE)), + unique(grep("^Village\nN = ", icc_interaction_plus_dt$grp_size, value = TRUE)), + unique(grep("^Site\nN = ", icc_interaction_plus_dt$grp_size, value = TRUE)), + unique(grep("^Replicate\nN =", icc_interaction_plus_dt$grp_size, value = TRUE)), + unique(grep("Line:Village\nN =", icc_interaction_plus_dt$grp_size, value = TRUE)), + unique(grep("Line:Site\nN =", icc_interaction_plus_dt$grp_size, value = TRUE)), + unique(grep("Village:Site\nN =", icc_interaction_plus_dt$grp_size, value = TRUE)), + unique(grep("Replicate:Village\nN ", icc_interaction_plus_dt$grp_size, value = TRUE)), + unique(grep("Replicate:Line\nN ", icc_interaction_plus_dt$grp_size, value = TRUE)), + unique(grep("Replicate:Site\nN ", icc_interaction_plus_dt$grp_size, value = TRUE)), + unique(grep("Residual\nN = ", icc_interaction_plus_dt$grp_size, value = TRUE)))) + +pRaincloud_interaction <- ggplot(icc_interaction_plus_dt, aes(x = percent, y = factor(grp_size, levels = rev(levels(grp_size))), fill = factor(grp, levels = rev(vars)))) + + geom_density_ridges(stat = "binline", bins = 90, scale = 0.7, draw_baseline = FALSE, aes(height =..ndensity..), alpha = 0.75) + + geom_boxplot(size = 0.5,width = .15, outlier.size = 0.25, position = position_nudge(y=-0.12), alpha = 0.75) + + coord_cartesian(xlim = c(1.2, NA), clip = "off") + + theme_classic() + + theme(axis.title.y=element_blank()) + + xlab("Percent Variance Explained") + + scale_y_discrete(expand = c(0.03, 0)) + + scale_fill_manual(values = var_colors) + + geom_vline(xintercept = 1, linetype = "dashed", color = "red") + + +ggsave(pRaincloud_interaction, filename = paste0(outdir, "variance_explained_raincloud_interaction.png"), height = 8, width = 7) +ggsave(pRaincloud_interaction, filename = paste0(outdir, "variance_explained_raincloud_interaction.pdf"), height = 8, width = 7) + + + +##### Pull just the significant variances per gene ##### +icc_interaction_sig_list <- list() + +for (ensg in unique(icc_interaction_plus_dt$gene)){ + icc_interaction_sig_list[[ensg]] <- icc_interaction_plus_dt[gene == ensg][P < 0.05/(nrow(icc_interaction_plus_dt[gene == ensg])-1)] + icc_interaction_sig_list[[ensg]] <- rbind(icc_interaction_sig_list[[ensg]], icc_interaction_plus_dt[gene == ensg & grp == "Residual"]) +} + +icc_interaction_sig_dt <- do.call(rbind, icc_interaction_sig_list) + + + +group_size <- data.table(table(icc_interaction_sig_dt$grp)) +colnames(group_size) <- c("grp", "size") +group_size$grp_size <- paste0(group_size$grp, "\nN = ", group_size$size) + +icc_interaction_sig_dt <- group_size[icc_interaction_sig_dt, on = "grp"] +icc_interaction_sig_dt$grp_size <- factor(icc_interaction_sig_dt$grp_size, levels = unique(group_size$grp_size)) + + +grp_size_order <- c("Line\nN = 6177", "Village\nN = 3713", "Site\nN = 6143", "Replicate\nN = 2372", "Line:Village\nN = 1601", "Line:Site\nN = 4089", "Village:Site\nN = 3939","Replicate:Village\nN = 1343", "Replicate:Line\nN = 72", "Replicate:Site\nN = 302", "Residual\nN = 12161") + + +pRaincloud_interaction_sig <- ggplot(icc_interaction_sig_dt, aes(x = percent, y = factor(grp_size, levels = grp_size_order), fill = factor(grp, levels = rev(vars)))) + + geom_density_ridges(stat = "binline", bins = 100, scale = 0.7, draw_baseline = FALSE, aes(height =..ndensity..), alpha = 0.75) + + geom_boxplot(size = 0.5,width = .15, outlier.size = 0.25, position = position_nudge(y=-0.12), alpha = 0.75) + + coord_cartesian(xlim = c(1.2, NA), clip = "off") + + theme_classic() + + theme(axis.title.y=element_blank()) + + xlab("Percent Variance Explained") + + scale_y_discrete(expand = c(0.03, 0)) + + scale_fill_manual(values = var_colors) + + geom_vline(xintercept = 1, linetype = "dashed", color = "firebrick3") + +ggsave(pRaincloud_interaction_sig, filename = paste0(outdir, "variance_explained_raincloud_interaction_significant.png"), height = 8, width = 7) +ggsave(pRaincloud_interaction_sig, filename = paste0(outdir, "variance_explained_raincloud_interaction_significant.pdf"), height = 8, width = 7) + + +total <- icc_interaction_sig_dt[,.(count = .N), by = .(grp)] +total_less1pct <- icc_interaction_sig_dt[percent <= 1][,.(count_less_1pct = .N), by = .(grp)] +total_less5pct <- icc_interaction_sig_dt[percent <= 5][,.(count_less_5pct = .N), by = .(grp)] +total_less10pct <- icc_interaction_sig_dt[percent <= 10][,.(count_less_10pct = .N), by = .(grp)] +summary <- total[total_less1pct, on = "grp"] +summary <- summary[total_less5pct, on = "grp"] +summary <- summary[total_less10pct, on = "grp"] +summary$count_greater_1pct <- summary$count - summary$count_less_1pct +summary$count_greater_5pct <- summary$count - summary$count_less_5pct +summary$count_greater_10pct <- summary$count - summary$count_less_10pct +summary$percent_1pct <- (summary$count_less_1pct/summary$count)*100 +summary$percent_5pct <- (summary$count_less_5pct/summary$count)*100 +summary$percent_10pct <- (summary$count_less_10pct/summary$count)*100 + + +pRaincloud_interaction_sig_1pct <- ggplot(icc_interaction_sig_dt[percent >= 1], aes(x = percent, y = factor(grp_size, levels = grp_size_order), fill = factor(grp, levels = rev(vars)))) + + geom_density_ridges(stat = "binline", bins = 90, scale = 0.7, draw_baseline = FALSE, aes(height =..ndensity..), alpha = 0.75) + + geom_boxplot(size = 0.5,width = .15, outlier.size = 0.25, position = position_nudge(y=-0.12), alpha = 0.75) + + coord_cartesian(xlim = c(1.2, NA), clip = "off") + + theme_classic() + + theme(axis.title.y=element_blank()) + + xlab("Percent Variance Explained") + + scale_y_discrete(expand = c(0.03, 0)) + + scale_fill_manual(values = var_colors) + + geom_vline(xintercept = 1, linetype = "dashed", color = "firebrick3") + + labs(fill="Covariate") + +ggsave(pRaincloud_interaction_sig_1pct, filename = paste0(outdir, "variance_explained_raincloud_interaction_significant_1pct.png"), height = 8, width = 7) +ggsave(pRaincloud_interaction_sig_1pct, filename = paste0(outdir, "variance_explained_raincloud_interaction_significant_1pct.pdf"), height = 8, width = 7) + + + +##### Pull just the significant variances genome-wide ##### +icc_interaction_plus_dt$fdr <- p.adjust(icc_interaction_plus_dt$P, method="fdr") +icc_interaction_sig_gw_dt <- icc_interaction_plus_dt[fdr < 0.05 | is.na(fdr)] + +group_size_sig_gw <- data.table(table(icc_interaction_sig_gw_dt$grp)) +colnames(group_size_sig_gw) <- c("grp", "size") +group_size_sig_gw$grp_size <- paste0(group_size_sig_gw$grp, "\nN = ", formatC(group_size_sig_gw$size, format="d", big.mark=",")) + +icc_interaction_sig_gw_dt <- group_size_sig_gw[icc_interaction_sig_gw_dt, on = "grp"] +icc_interaction_sig_gw_dt$grp_size <- factor(icc_interaction_sig_gw_dt$grp_size, levels = unique(group_size_sig_gw$grp_size)) + + +group_size_sig_gw_order <- c("Line\nN = 7,220", "Village\nN = 4,332", "Site\nN = 7,104", "Replicate\nN = 2,843", "Line:Village\nN = 1,858", "Line:Site\nN = 4,358", "Village:Site\nN = 4,343","Replicate:Village\nN = 1,530", "Replicate:Line\nN = 95", "Replicate:Site\nN = 335", "Residual\nN = 12,161") + + +pRaincloud_interaction_sig_gw <- ggplot(icc_interaction_sig_gw_dt, aes(x = percent, y = factor(grp_size, levels = group_size_sig_gw_order), fill = factor(grp, levels = rev(vars)))) + + geom_density_ridges(stat = "binline", bins = 100, scale = 0.7, draw_baseline = FALSE, aes(height =..ndensity..), alpha = 0.75) + + geom_boxplot(size = 0.5,width = .15, outlier.size = 0.25, position = position_nudge(y=-0.12), alpha = 0.75) + + coord_cartesian(xlim = c(1.2, NA), clip = "off") + + theme_classic() + + theme(axis.title.y=element_blank()) + + xlab("Percent Variance Explained") + + scale_y_discrete(expand = c(0.03, 0)) + + scale_fill_manual(values = var_colors) + + geom_vline(xintercept = 1, linetype = "dashed", color = "firebrick3") + +ggsave(pRaincloud_interaction_sig_gw, filename = paste0(outdir, "variance_explained_raincloud_interaction_significant_genome_wide.png"), height = 8, width = 7) +ggsave(pRaincloud_interaction_sig_gw, filename = paste0(outdir, "variance_explained_raincloud_interaction_significant_genome_wide.pdf"), height = 8, width = 7) + + + + + + + +icc_interaction_sig_dt[gene == "ENSG00000106153"] +icc_dt[gene == "ENSG00000106153"] + + +##### Add gene IDs for easy identification downstream ##### +GeneConversion1 <- read_delim("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/data/Expression_200128_A00152_0196_BH3HNFDSXY/GE/DRENEA_1/outs/filtered_feature_bc_matrix/features.tsv.gz", col_names = F, delim = "\t") +GeneConversion2 <- read_delim("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/data/Expression_200128_A00152_0196_BH3HNFDSXY/GE/Village_B_1_week/outs/filtered_feature_bc_matrix/features.tsv.gz", col_names = F, delim = "\t") + +GeneConversion <- unique(rbind(GeneConversion1, GeneConversion2)) +GeneConversion <- GeneConversion[!duplicated(GeneConversion$X1),] +GeneConversion$X3 <- NULL +colnames(GeneConversion) <- c("gene", "Gene_ID") + +GeneConversion <- data.table(GeneConversion) + + +### Add the gene IDs to the icc_dt ### + +icc_interaction_sig_gw_dt <- GeneConversion[icc_interaction_sig_gw_dt, on = "gene"] + +icc_interaction_sig_gw_dt[grp == "Site"& percent_round > 1][rev(order(percent))]$Gene_ID +head(icc_interaction_sig_gw_dt[grp == "Site" & percent_round > 1][rev(order(percent))][,c("Gene_ID", "percent_round")], n = 50) +icc_interaction_sig_gw_dt[grp == "Line"][rev(order(percent))]$Gene_ID +head(icc_interaction_sig_gw_dt[grp == "Line" & percent_round > 1][rev(order(percent))][,c("Gene_ID", "percent_round")], n = 50) +icc_interaction_sig_gw_dt[grp == "Village"][rev(order(percent))]$Gene_ID +head(icc_interaction_sig_gw_dt[grp == "Village" & percent_round > 1][rev(order(percent))][,c("Gene_ID", "percent_round")], n = 50) +head(icc_interaction_sig_gw_dt[grp == "Line:Village" & percent_round > 1][rev(order(percent))][,c("Gene_ID", "percent_round")], n = 50) +icc_interaction_sig_gw_dt[Gene_ID == "EIF4EBP1" ] +icc_interaction_plus_dt[gene == "ENSG00000187840"] + +fwrite(icc_interaction_sig_gw_dt, paste0(outdir, "sig_results.tsv.gz"), sep = "\t", compress = "gzip") + +## Highlight +## X chromosome genes - wouldn't expect these to be Line-biased because expressed by both males and females +## Y chromosome genes - should be line-biased because expressed by only males and have some male(s) and some female(s) +## mt genes +## ribosomal genes +## look at gsea and kegg pathways for each + +## Read in gtf used as reference and pull just X, Y or MT chromosome genes from it, use ribosomal file for rb genes +gtf <- fread("/directflow/GWCCGPipeline/projects/reference/refdata-cellranger-GRCh38-3.0.0/genes/genes.gtf", sep = "\t", autostart = 6, header = FALSE) + +gtf_genes <- gtf[!(grep("transcript_id", V9))] + +gtf_genes$V9 <- gsub("gene_id \"", "",gtf_genes$V9 ) %>% + gsub("\"; gene_version \"", ";", .) %>% + gsub("\"; gene_name \"", ";", .) %>% + gsub("\"; gene_source \"", ";", .) %>% + gsub("\"; gene_biotype \"", ";", .) %>% + gsub("\"", "", .) + +gtf_genes[, c("gene_id", "gene_version", "gene_name", "gene_source", "gene_biotype") := data.table(str_split_fixed(V9,";", 5))] + +icc_interaction_plus_dt <- GeneConversion[icc_interaction_plus_dt, on = "gene"] + + + +X_chromosome_genes <- gtf_genes[V1 == "X"] +X_genelist <- X_chromosome_genes$gene_id[X_chromosome_genes$gene_id %in% genes] +Y_chromosome_genes <- gtf_genes[V1 == "Y"] +Y_genelist <- Y_chromosome_genes$gene_id[Y_chromosome_genes$gene_id %in% genes] +MT_chromosome_genes <- gtf_genes[V1 == "MT"] +MT_genelist <- MT_chromosome_genes$gene_id[MT_chromosome_genes$gene_id %in% genes] +RbGeneList <- read.delim(file = "/directflow/SCCGGroupShare/projects/DrewNeavin/References/RibosomalGeneList_GeneID_ENSG.txt") +Rb_genelist <- RbGeneList$ENSG[RbGeneList$ENSG %in% genes] + + +### Make stacked bar plots of the variance explained by different factors for these gene groups + + + + +## Figure of x chromosome genes ## +icc_x <- icc_interaction_plus_dt[data.table(gene = icc_interaction_plus_dt[grp == "Residual"][gene %in% X_genelist][order(percent_round)]$gene), on = "gene"] +icc_x$grp <- factor(icc_x$grp, levels = rev(selected_vars)) +icc_x$gene <- factor(icc_x$gene, levels = unique(icc_x$gene)) + +bar_proportions_x <- ggplot(icc_x, aes(x = gene, y = percent, fill = grp)) + + geom_bar(position="stack", stat="identity", alpha = 0.75) + + theme_classic() + + theme(axis.title.x=element_blank(), + axis.text.x=element_blank(), + axis.ticks.x=element_blank(), + plot.title = element_text(hjust = 0.5)) + + scale_fill_manual(values = var_colors) + + ggtitle("Variance Explained of\nX Chromosome Genes") + + +ggsave(bar_proportions_x, filename = paste0(outdir, "variance_explained_bar_x_genes.png"), width = 20) + + +## Figure of y chromosome genes ## +icc_y <- icc_interaction_plus_dt[data.table(gene = icc_interaction_plus_dt[grp == "Residual"][gene %in% Y_genelist][order(percent_round)]$gene), on = "gene"] +icc_y$grp <- factor(icc_y$grp, levels = rev(selected_vars)) +icc_y$gene <- factor(icc_y$gene, levels = unique(icc_y$gene)) +icc_y$Gene_ID <- factor(icc_y$Gene_ID, levels = unique(icc_y$Gene_ID)) + + +bar_proportions_y <- ggplot(icc_y, aes(x = Gene_ID, y = percent, fill = grp)) + + geom_bar(position="stack", stat="identity", alpha = 0.75) + + theme_classic() + + theme(axis.title.x=element_blank(), + # axis.text.x=element_blank(), + # axis.ticks.x=element_blank(), + plot.title = element_text(hjust = 0.5), + axis.text.x = element_text(angle = 90, vjust = 0.5, hjust=1)) + + scale_fill_manual(values = var_colors) + + scale_y_continuous(expand = c(0, 0)) + + ggtitle("Variance Explained of\nY Chromosome Genes") + + ylab("Percent") + + +ggsave(bar_proportions_y, filename = paste0(outdir, "variance_explained_bar_y_genes.png"), width = 4.5, height = 4.5) +ggsave(bar_proportions_y, filename = paste0(outdir, "variance_explained_bar_y_genes.pdf"), width = 4.5, height = 4.5) + + + +## Figure of mt chromosome genes ## +icc_mt <- icc_interaction_plus_dt[data.table(gene = icc_interaction_plus_dt[grp == "Residual"][gene %in% MT_genelist][order(percent_round)]$gene), on = "gene"] +icc_mt$grp <- factor(icc_mt$grp, levels = rev(selected_vars)) +icc_mt$gene <- factor(icc_mt$gene, levels = unique(icc_mt$gene)) +icc_mt$Gene_ID <- factor(icc_mt$Gene_ID, levels = unique(icc_mt$Gene_ID)) + + +bar_proportions_mt <- ggplot(icc_mt, aes(x = Gene_ID, y = percent, fill = grp)) + + geom_bar(position="stack", stat="identity", alpha = 0.75) + + theme_classic() + + theme(axis.title.x=element_blank(), + # axis.text.x=element_blank(), + # axis.ticks.x=element_blank(), + plot.title = element_text(hjust = 0.5), + axis.text.x = element_text(angle = 90, vjust = 0.5, hjust=1)) + + scale_fill_manual(values = var_colors) + + scale_y_continuous(expand = c(0, 0)) + + ggtitle("Variance Explained of\nMitochondrial Genes") + + ylab("Percent") + +ggsave(bar_proportions_mt, filename = paste0(outdir, "variance_explained_bar_mt_genes.png"), width = 4.5, height = 4.5) +ggsave(bar_proportions_mt, filename = paste0(outdir, "variance_explained_bar_mt_genes.pdf"), width = 4.5, height = 4.5) + + + +## Figure of mt chromosome genes ## +icc_rb <- icc_interaction_plus_dt[data.table(gene = icc_interaction_plus_dt[grp == "Residual"][gene %in% Rb_genelist][order(percent_round)]$gene), on = "gene"] +icc_rb$grp <- factor(icc_rb$grp, levels = rev(selected_vars)) +icc_rb$gene <- factor(icc_rb$gene, levels = unique(icc_rb$gene)) + + +bar_proportions_rb <- ggplot(icc_rb, aes(x = gene, y = percent, fill = grp)) + + geom_bar(position="stack", stat="identity", alpha = 0.75) + + theme_classic() + + theme(axis.title.x=element_blank(), + axis.text.x=element_blank(), + axis.ticks.x=element_blank(), + plot.title = element_text(hjust = 0.5)) + + scale_fill_manual(values = var_colors) + + scale_y_continuous(expand = c(0, 0)) + + ggtitle("Variance Explained\nof Ribosomal Genes") + + +ggsave(bar_proportions_rb, filename = paste0(outdir, "variance_explained_bar_rb_genes.png"), width = 10, height = 4) +ggsave(bar_proportions_rb, filename = paste0(outdir, "variance_explained_bar_rb_genes.pdf"), width = 10, height = 4) + + +### Plot Pluripotency Genes ### +pluri_genes <- fread(paste0(dir,"data/pluripotency_genes.tsv"), sep = "\t", col.names = "Gene_ID", header = FALSE) + + +pluri_genes <- GeneConversion[pluri_genes, on = "Gene_ID"] + + +icc_dt_pluri_genes <- icc_interaction_plus_dt[pluri_genes,on = c("gene")] +icc_dt_pluri_genes$grp <- factor(icc_dt_pluri_genes$grp, levels = rev(selected_vars)) +icc_dt_pluri_genes <- icc_dt_pluri_genes[data.table(gene = icc_dt_pluri_genes[grp == "Residual"][order(percent)]$gene), on = "gene"] +icc_dt_pluri_genes$Gene_ID <- factor(icc_dt_pluri_genes$Gene_ID, levels = unique(icc_dt_pluri_genes$Gene_ID)) + + + +pPluri_Genes_Cont <- ggplot() + + geom_bar(data = icc_dt_pluri_genes, aes(Gene_ID, percent, fill = grp), position = "stack", stat = "identity", alpha = 0.75) + + theme_classic() + + # facet_wrap(Gene_ID ~ ., nrow = 3) + + scale_fill_manual(values = var_colors) + + theme(plot.title = element_text(hjust = 0.5), + axis.text.x = element_text(angle = 90, vjust = 0.5, hjust=1)) + + ylab("Percent Gene Expression Variance Explained") + + ggtitle("Variance Explained of\nPluripotency Genes") + + theme(axis.title.x=element_blank()) + +ggsave(pPluri_Genes_Cont, filename = paste0(outdir, "Pluripotent_Gene_Variable_Contributions.png"), width = 6, height = 4.5) +ggsave(pPluri_Genes_Cont, filename = paste0(outdir, "Pluripotent_Gene_Variable_Contributions.pdf"), width = 6, height = 4.5) + + + +##### check for variance explained for eQTL genes (from Kilpinen et al) that are ##### +eqtls <- fread("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/gene_snp_list.tsv", sep = "\t") + + +eqtls_icc <- icc_interaction_plus_dt[unique(eqtls[,"gene"]), on = "gene"] +eqtls_icc$grp <- factor(eqtls_icc$grp, levels = rev(vars)) +eqtls_icc <- eqtls_icc[data.table(gene = eqtls_icc[grp == "Residual"][order(percent)]$gene), on = "gene"] +eqtls_icc$Gene_ID <- factor(eqtls_icc$Gene_ID, levels = unique(eqtls_icc$Gene_ID)) + + +group_size_eqtl <- data.table(table(eqtls_icc$grp)) +colnames(group_size_eqtl) <- c("grp", "size") +group_size_eqtl$grp_size <- paste0(group_size_eqtl$grp, "\nN = ", group_size_eqtl$size) + +eqtls_icc <- group_size_eqtl[eqtls_icc, on = "grp"] +grp_size_order_eqtl <- c("Line\nN = 2371", "Village\nN = 1836", "Site\nN = 2461", "Replicate\nN = 869", "Line:Village\nN = 367", "Line:Site\nN = 911", "Village:Site\nN = 898","Replicate:Village\nN = 305", "Replicate:Line\nN = 25", "Replicate:Site\nN = 78", "Residual\nN = 2542") +eqtls_icc$grp_size <- factor(eqtls_icc$grp_size, levels = grp_size_order_eqtl) + + + +eqtls_icc_1pct <- eqtls_icc + + +for (ensg in unique(eqtls_icc$gene)){ + if (!any(eqtls_icc[gene == ensg & grp != "Residual"]$percent > 1)){ + eqtls_icc_1pct <- eqtls_icc_1pct[gene != ensg] + } +} + + + +eqtls_icc_1pct_grouped_list <- list() + + +for (ensg in unique(eqtls_icc_1pct$gene)){ + group <- eqtls_icc_1pct[gene == ensg & grp != "Residual"][which.max(percent)]$grp + eqtls_icc_1pct_grouped_list[[group]][[ensg]] <- eqtls_icc_1pct[gene == ensg] +} + +eqtls_icc_1pct_grouped <- lapply(eqtls_icc_1pct_grouped_list, function(x) do.call(rbind, x)) +eqtls_icc_1pct_grouped <- lapply(names(eqtls_icc_1pct_grouped), function(x){ + eqtls_icc_1pct_grouped[[x]]$largest_contributor <- x + return(eqtls_icc_1pct_grouped[[x]]) +}) + +eqtls_icc_1pct_grouped_dt <- do.call(rbind, eqtls_icc_1pct_grouped) + +eqtls_icc_1pct_grouped_dt$largest_contributor <- factor(eqtls_icc_1pct_grouped_dt$largest_contributor, levels = c("Line", "Village", "Site", "Line:Village", "Line:Site", "Village:Site", "Replicate:Village")) + + + +pPluri_Genes_largest_Cont_eqtl <- ggplot() + + geom_bar(data = eqtls_icc_1pct_grouped_dt, aes(Gene_ID, percent, fill = factor(grp, levels = rev(vars))), position = "stack", stat = "identity", alpha = 0.75) + + theme_classic() + + facet_grid(. ~ largest_contributor, scales = "free_x", space = "free_x") + + scale_fill_manual(values = var_colors) + + ylab("Percent Gene Expression Variance Explained") + + theme(axis.title.x=element_blank(), + axis.text.x = element_blank(), + panel.spacing.x=unit(0, "lines"), + axis.ticks.x = element_blank()) + + geom_hline(yintercept = 1, linetype = "dashed") + # scale_y_discrete(expand = c(0.03, 0)) + # scale_x_discrete(expand = c(0.03, 0)) + + +ggsave(pPluri_Genes_largest_Cont_eqtl, filename = paste0(outdir, "eQTL_Genes_Variance_Contributions_1pct_largest_cont.png"), width = 10, height = 4) +ggsave(pPluri_Genes_largest_Cont_eqtl, filename = paste0(outdir, "eQTL_Genes_Variance_Contributions_1pct_largest_cont.pdf"), width = 10, height = 4) + + + + + + + + + + + + +### Write interaction genes out for rerunning Line:Village genes to see if significant on their own without interaction ### +icc_dt_vilXline <- icc_dt[grp == "Village:Line"] + +fwrite(icc_dt_vilXline$gene, paste0(outdir, "villageXline.tsv"), sep = "\t") + + + + +# ### Count number of each chromosome/gene category type +# ### numbers are the numbers of that category that where a significant percent of variance is explained by this variable +# ### percent of that category that where a significant percent of variance is explained by this variable + +# x_number <- lapply(genes_list, function(x){ +# length(which(x %in% X_chromosome_genes$gene_id)) +# }) + +# x_percent <- lapply(genes_list, function(x){ +# length(which(x %in% X_chromosome_genes$gene_id))/length(X_chromosome_genes$gene_id) +# }) + +# y_number <- lapply(genes_list, function(x){ +# length(which(x %in% Y_chromosome_genes$gene_id)) +# }) + +# y_percent <- lapply(genes_list, function(x){ +# length(which(x %in% Y_chromosome_genes$gene_id))/length(Y_chromosome_genes$gene_id) +# }) + +# mt_number <- lapply(genes_list, function(x){ +# length(which(x %in% MT_chromosome_genes$gene_id)) +# }) + +# mt_percent <- lapply(genes_list, function(x){ +# length(which(x %in% MT_chromosome_genes$gene_id))/length(MT_chromosome_genes$gene_id) +# }) + +# rb_number <- lapply(genes_list, function(x){ +# length(which(x %in% RbGeneList$ENSG)) +# }) + +# rb_percent <- lapply(genes_list, function(x){ +# length(which(x %in% RbGeneList$ENSG))/length(RbGeneList$ENSG) +# }) + + + +# ### for > 1% var explained +# ### Count number of each chromosome/gene category type +# x_number_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% X_chromosome_genes$gene_id)) +# }) +# names(x_number_1) <- vars + +# x_percent_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% X_chromosome_genes$gene_id))/length(X_chromosome_genes$gene_id) +# }) +# names(x_percent_1) <- vars + +# y_number_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% Y_chromosome_genes$gene_id)) +# }) +# names(y_number_1) <- vars + +# y_percent_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% Y_chromosome_genes$gene_id))/length(Y_chromosome_genes$gene_id) +# }) +# names(y_percent_1) <- vars + +# mt_number_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% MT_chromosome_genes$gene_id)) +# }) +# names(mt_number_1) <- vars + +# mt_percent_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% MT_chromosome_genes$gene_id))/length( MT_chromosome_genes$gene_id) +# }) +# names(mt_percent_1) <- vars + +# rb_number_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% RbGeneList$ENSG)) +# }) +# names(rb_number_1) <- vars + +# rb_percent_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% RbGeneList$ENSG))/length(RbGeneList$ENSG) +# }) +# names(rb_percent_1) <- vars + + +### Pathway analysis ### +geneList <- lapply(genes_list, function(x){ + tmp <- bitr(x, fromType = "ENSEMBL", + toType = c("ENTREZID"), + OrgDb = org.Hs.eg.db)$ENTREZID + tmp[!is.na(tmp)] +}) + + +gg <- list() +kk <- list() + + + +df = as.data.frame(org.Hs.egGO) +go_gene_list = unique(sort(df$gene_id)) + +dfk = as.data.frame(org.Hs.egPATH) +kegg_gene_list = unique(sort(dfk$gene_id)) + + + +for (group in c("Line", "Village", "Site", "Replicate","Village:Line", "Line:Site", "Village:Site", "Replicate:Village", "Replicate:Line", "Replicate:Site", "Residual")){ + kk[[group]] <- enrichKEGG(gene = geneList[[group]], + universe = geneList[[group]], + organism = 'hsa', + pvalueCutoff = 1, + pAdjustMethod = "none", + qvalueCutoff = 1, + keyType = 'ncbi-geneid') + + gg[[group]] <- groupGO(gene = geneList[[group]], + OrgDb = org.Hs.eg.db, + readable = TRUE) +} + +lapply(kk, head) +lapply(gg, head) + + +hsGO <- godata('org.Hs.eg.db', ont="MF") + + +sim_results <- list() + +vars <- c("Line", "Village", "Site", "Replicate","Village:Line", "Line:Site", "Village:Site", "Replicate:Village", "Replicate:Line", "Replicate:Site") + +for (group1 in vars){ + print(group1) + for (group2 in vars[(grep(paste0("^",group1, "$"), vars) + 1): length(vars)]){ + print(group2) + sim_results[[group1]][[group2]] <- clusterSim(geneList[[group1]], geneList[[group2]], semData=hsGO, measure="Wang", combine="BMA") + } +} + + + + + +# genes2rerun <- c(character()) + +# for (g in unique(icc_dt$gene)){ +# print(g) +# genes2rerun <- c(genes2rerun, as.character(unique(icc_dt[gene == g][P > 0.05/(nrow(icc_dt[gene == g])-1)]$gene))) +# } + + +# for (gene in genes2rerun){ +# print(gene) +# # unlink(paste0(icc_dir,gene,"_icc.rds")) +# print(file.exists(paste0(icc_dir,gene,"_icc.rds"))) +# unlink(paste0("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/",gene,"_fitted_models.rds")) +# unlink(paste0("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/residuals4qtl/",gene,"_residuals4qtl.rds")) +# } + + diff --git a/Variance/post_review2/variance_partition_post_review_snake.sh b/Variance/post_review2/variance_partition_post_review_snake.sh new file mode 100644 index 0000000..24c9bee --- /dev/null +++ b/Variance/post_review2/variance_partition_post_review_snake.sh @@ -0,0 +1,109 @@ + + +SNAKEFILE="/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/scripts/Variance/post_review2/variance_partition_post_review.smk" +LOG="/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/logs/" + +mkdir -p $LOG + +snakemake \ + --snakefile $SNAKEFILE \ + --dryrun \ + --cores 1 \ + --quiet \ + --unlock + + +snakemake \ + --snakefile $SNAKEFILE \ + --dryrun \ + --cores 1 \ + --reason > jobs2run.txt + + + +nohup \ + snakemake \ + --snakefile $SNAKEFILE \ + --jobs 200 \ + --use-singularity \ + --restart-times 1 \ + --keep-going \ + --cluster \ + "qsub -S /bin/bash \ + -q short.q \ + -r yes \ + -pe smp {threads} \ + -l tmp_requested={resources.disk_per_thread_gb}G \ + -l mem_requested={resources.mem_per_thread_gb}G \ + -e $LOG \ + -o $LOG \ + -j y \ + -V" \ + > $LOG/nohup_`date +%Y-%m-%d.%H:%M:%S`.log & + + +snakemake \ + --snakefile $SNAKEFILE \ + --dryrun \ + --cores 1 \ + --quiet \ + --unlock + + +snakemake \ + --snakefile $SNAKEFILE \ + --dryrun \ + --cores 1 \ + --quiet \ + --cleanup-metadata \ + /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000116001_icc.rds \ + /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000116001_fitted_models.rds \ + /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000084112_icc.rds \ + /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000084112_fitted_models.rds \ + /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000130706_icc.rds \ + /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000130706_fitted_models.rds + + + + + + +ENSG00000140481 +ENSG00000158552 +ENSG00000167004 +ENSG00000184281 +ENSG00000185437 +ENSG00000185875 +ENSG00000196109 +ENSG00000197536 +ENSG00000215910 +ENSG00000215883 +ENSG00000258297 +ENSG00000259488 +ENSG00000274877 + + +ENSG00000158555 +ENSG00000167005 +ENSG00000184292 +ENSG00000184281 +ENSG00000185437 +ENSG00000185875 +ENSG00000196109 +ENSG00000197536 +ENSG00000215866 +ENSG00000258289 +ENSG00000259485 +ENSG00000274828 + + +rm ENSG00000167011_fitted_models.rds +rm ENSG00000184304_fitted_models.rds +rm ENSG00000185477_fitted_models.rds +rm ENSG00000185900_fitted_models.rds +rm ENSG00000196132_fitted_models.rds +rm ENSG00000197566_fitted_models.rds +rm ENSG00000217930_fitted_models.rds +rm ENSG00000258593_fitted_models.rds +rm ENSG00000259715_fitted_models.rds +rm ENSG00000275074_fitted_models.rds diff --git a/Variance/post_review_all_cells/jobs2run.txt b/Variance/post_review_all_cells/jobs2run.txt new file mode 100644 index 0000000..766112f --- /dev/null +++ b/Variance/post_review_all_cells/jobs2run.txt @@ -0,0 +1,4429 @@ +Building DAG of jobs... +Job counts: + count jobs + 1 all + 441 partition_variance + 442 + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000152332_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000152332_fitted_models.rds + jobid: 1122 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000152332_fitted_models.rds + wildcards: gene=ENSG00000152332 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000183060_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000183060_fitted_models.rds + jobid: 11247 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000183060_fitted_models.rds + wildcards: gene=ENSG00000183060 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000182459_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000182459_fitted_models.rds + jobid: 12882 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000182459_fitted_models.rds + wildcards: gene=ENSG00000182459 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000162695_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000162695_fitted_models.rds + jobid: 748 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000162695_fitted_models.rds + wildcards: gene=ENSG00000162695 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000164073_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000164073_fitted_models.rds + jobid: 3763 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000164073_fitted_models.rds + wildcards: gene=ENSG00000164073 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000167992_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000167992_fitted_models.rds + jobid: 8113 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000167992_fitted_models.rds + wildcards: gene=ENSG00000167992 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000173653_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000173653_fitted_models.rds + jobid: 8293 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000173653_fitted_models.rds + wildcards: gene=ENSG00000173653 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000140937_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000140937_fitted_models.rds + jobid: 11758 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000140937_fitted_models.rds + wildcards: gene=ENSG00000140937 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000167962_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000167962_fitted_models.rds + jobid: 11338 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000167962_fitted_models.rds + wildcards: gene=ENSG00000167962 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000171443_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000171443_fitted_models.rds + jobid: 14608 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000171443_fitted_models.rds + wildcards: gene=ENSG00000171443 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000229729_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000229729_fitted_models.rds + jobid: 2924 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000229729_fitted_models.rds + wildcards: gene=ENSG00000229729 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000164074_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000164074_fitted_models.rds + jobid: 3764 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000164074_fitted_models.rds + wildcards: gene=ENSG00000164074 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000173599_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000173599_fitted_models.rds + jobid: 8294 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000173599_fitted_models.rds + wildcards: gene=ENSG00000173599 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000170296_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000170296_fitted_models.rds + jobid: 12104 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000170296_fitted_models.rds + wildcards: gene=ENSG00000170296 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000261221_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000261221_fitted_models.rds + jobid: 14609 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000261221_fitted_models.rds + wildcards: gene=ENSG00000261221 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000189339_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000189339_fitted_models.rds + jobid: 45 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000189339_fitted_models.rds + wildcards: gene=ENSG00000189339 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000120334_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000120334_fitted_models.rds + jobid: 1170 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000120334_fitted_models.rds + wildcards: gene=ENSG00000120334 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000174579_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000174579_fitted_models.rds + jobid: 3106 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000174579_fitted_models.rds + wildcards: gene=ENSG00000174579 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000169057_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000169057_fitted_models.rds + jobid: 6616 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000169057_fitted_models.rds + wildcards: gene=ENSG00000169057 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000060718_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000060718_fitted_models.rds + jobid: 752 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000060718_fitted_models.rds + wildcards: gene=ENSG00000060718 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000197948_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000197948_fitted_models.rds + jobid: 4397 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000197948_fitted_models.rds + wildcards: gene=ENSG00000197948 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000157625_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000157625_fitted_models.rds + jobid: 6197 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000157625_fitted_models.rds + wildcards: gene=ENSG00000157625 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000197724_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000197724_fitted_models.rds + jobid: 7457 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000197724_fitted_models.rds + wildcards: gene=ENSG00000197724 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000269399_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000269399_fitted_models.rds + jobid: 13937 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000269399_fitted_models.rds + wildcards: gene=ENSG00000269399 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000274104_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000274104_fitted_models.rds + jobid: 14102 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000274104_fitted_models.rds + wildcards: gene=ENSG00000274104 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000138399_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000138399_fitted_models.rds + jobid: 2178 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000138399_fitted_models.rds + wildcards: gene=ENSG00000138399 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000272173_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000272173_fitted_models.rds + jobid: 9303 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000272173_fitted_models.rds + wildcards: gene=ENSG00000272173 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000221909_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000221909_fitted_models.rds + jobid: 5779 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000221909_fitted_models.rds + wildcards: gene=ENSG00000221909 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000130182_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000130182_fitted_models.rds + jobid: 11389 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000130182_fitted_models.rds + wildcards: gene=ENSG00000130182 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000099381_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000099381_fitted_models.rds + jobid: 11644 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000099381_fitted_models.rds + wildcards: gene=ENSG00000099381 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000159200_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000159200_fitted_models.rds + jobid: 15154 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000159200_fitted_models.rds + wildcards: gene=ENSG00000159200 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000125257_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000125257_fitted_models.rds + jobid: 10220 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000125257_fitted_models.rds + wildcards: gene=ENSG00000125257 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000147231_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000147231_fitted_models.rds + jobid: 6456 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000147231_fitted_models.rds + wildcards: gene=ENSG00000147231 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000168661_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000168661_fitted_models.rds + jobid: 14106 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000168661_fitted_models.rds + wildcards: gene=ENSG00000168661 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000152102_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000152102_fitted_models.rds + jobid: 2092 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000152102_fitted_models.rds + wildcards: gene=ENSG00000152102 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000162600_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000162600_fitted_models.rds + jobid: 592 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000162600_fitted_models.rds + wildcards: gene=ENSG00000162600 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000143590_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000143590_fitted_models.rds + jobid: 1012 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000143590_fitted_models.rds + wildcards: gene=ENSG00000143590 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000143514_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000143514_fitted_models.rds + jobid: 1387 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000143514_fitted_models.rds + wildcards: gene=ENSG00000143514 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000122035_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000122035_fitted_models.rds + jobid: 10057 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000122035_fitted_models.rds + wildcards: gene=ENSG00000122035 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000136051_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000136051_fitted_models.rds + jobid: 9802 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000136051_fitted_models.rds + wildcards: gene=ENSG00000136051 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000180884_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000180884_fitted_models.rds + jobid: 14107 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000180884_fitted_models.rds + wildcards: gene=ENSG00000180884 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000168310_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000168310_fitted_models.rds + jobid: 3893 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000168310_fitted_models.rds + wildcards: gene=ENSG00000168310 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000204950_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000204950_fitted_models.rds + jobid: 8123 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000204950_fitted_models.rds + wildcards: gene=ENSG00000204950 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000141540_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000141540_fitted_models.rds + jobid: 12729 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000141540_fitted_models.rds + wildcards: gene=ENSG00000141540 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000185674_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000185674_fitted_models.rds + jobid: 1975 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000185674_fitted_models.rds + wildcards: gene=ENSG00000185674 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000144357_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000144357_fitted_models.rds + jobid: 2185 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000144357_fitted_models.rds + wildcards: gene=ENSG00000144357 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000074590_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000074590_fitted_models.rds + jobid: 9805 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000074590_fitted_models.rds + wildcards: gene=ENSG00000074590 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000168152_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000168152_fitted_models.rds + jobid: 3626 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000168152_fitted_models.rds + wildcards: gene=ENSG00000168152 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000009335_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000009335_fitted_models.rds + jobid: 6101 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000009335_fitted_models.rds + wildcards: gene=ENSG00000009335 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000108262_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000108262_fitted_models.rds + jobid: 12296 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000108262_fitted_models.rds + wildcards: gene=ENSG00000108262 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000117036_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000117036_fitted_models.rds + jobid: 1077 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000117036_fitted_models.rds + wildcards: gene=ENSG00000117036 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000198720_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000198720_fitted_models.rds + jobid: 12297 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000198720_fitted_models.rds + wildcards: gene=ENSG00000198720 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000104915_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000104915_fitted_models.rds + jobid: 13887 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000104915_fitted_models.rds + wildcards: gene=ENSG00000104915 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000153066_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000153066_fitted_models.rds + jobid: 11458 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000153066_fitted_models.rds + wildcards: gene=ENSG00000153066 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000074755_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000074755_fitted_models.rds + jobid: 12043 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000074755_fitted_models.rds + wildcards: gene=ENSG00000074755 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000100109_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000100109_fitted_models.rds + jobid: 14818 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000100109_fitted_models.rds + wildcards: gene=ENSG00000100109 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000269176_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000269176_fitted_models.rds + jobid: 8159 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000269176_fitted_models.rds + wildcards: gene=ENSG00000269176 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000185722_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000185722_fitted_models.rds + jobid: 12045 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000185722_fitted_models.rds + wildcards: gene=ENSG00000185722 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000090975_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000090975_fitted_models.rds + jobid: 9961 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000090975_fitted_models.rds + wildcards: gene=ENSG00000090975 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000212864_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000212864_fitted_models.rds + jobid: 7786 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000212864_fitted_models.rds + wildcards: gene=ENSG00000212864 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000078747_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000078747_fitted_models.rds + jobid: 13306 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000078747_fitted_models.rds + wildcards: gene=ENSG00000078747 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000166619_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000166619_fitted_models.rds + jobid: 13351 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000166619_fitted_models.rds + wildcards: gene=ENSG00000166619 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000269416_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000269416_fitted_models.rds + jobid: 14056 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000269416_fitted_models.rds + wildcards: gene=ENSG00000269416 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000099942_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000099942_fitted_models.rds + jobid: 14761 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000099942_fitted_models.rds + wildcards: gene=ENSG00000099942 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000118200_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000118200_fitted_models.rds + jobid: 1247 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000118200_fitted_models.rds + wildcards: gene=ENSG00000118200 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000123191_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000123191_fitted_models.rds + jobid: 10172 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000123191_fitted_models.rds + wildcards: gene=ENSG00000123191 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000165782_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000165782_fitted_models.rds + jobid: 10292 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000165782_fitted_models.rds + wildcards: gene=ENSG00000165782 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000272990_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000272990_fitted_models.rds + jobid: 3183 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000272990_fitted_models.rds + wildcards: gene=ENSG00000272990 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000090530_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000090530_fitted_models.rds + jobid: 3303 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000090530_fitted_models.rds + wildcards: gene=ENSG00000090530 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000174749_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000174749_fitted_models.rds + jobid: 3723 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000174749_fitted_models.rds + wildcards: gene=ENSG00000174749 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000167600_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000167600_fitted_models.rds + jobid: 14268 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000167600_fitted_models.rds + wildcards: gene=ENSG00000167600 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000198373_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000198373_fitted_models.rds + jobid: 11839 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000198373_fitted_models.rds + wildcards: gene=ENSG00000198373 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000072121_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000072121_fitted_models.rds + jobid: 10549 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000072121_fitted_models.rds + wildcards: gene=ENSG00000072121 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000165661_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000165661_fitted_models.rds + jobid: 7744 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000165661_fitted_models.rds + wildcards: gene=ENSG00000165661 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000124198_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000124198_fitted_models.rds + jobid: 13429 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000124198_fitted_models.rds + wildcards: gene=ENSG00000124198 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000113273_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000113273_fitted_models.rds + jobid: 4145 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000113273_fitted_models.rds + wildcards: gene=ENSG00000113273 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000115307_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000115307_fitted_models.rds + jobid: 1881 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000115307_fitted_models.rds + wildcards: gene=ENSG00000115307 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000213341_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000213341_fitted_models.rds + jobid: 9051 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000213341_fitted_models.rds + wildcards: gene=ENSG00000213341 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000010610_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000010610_fitted_models.rds + jobid: 9291 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000010610_fitted_models.rds + wildcards: gene=ENSG00000010610 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000172733_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000172733_fitted_models.rds + jobid: 6787 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000172733_fitted_models.rds + wildcards: gene=ENSG00000172733 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000168096_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000168096_fitted_models.rds + jobid: 11422 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000168096_fitted_models.rds + wildcards: gene=ENSG00000168096 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000163625_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000163625_fitted_models.rds + jobid: 3637 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000163625_fitted_models.rds + wildcards: gene=ENSG00000163625 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000185261_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000185261_fitted_models.rds + jobid: 4192 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000185261_fitted_models.rds + wildcards: gene=ENSG00000185261 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000251603_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000251603_fitted_models.rds + jobid: 3818 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000251603_fitted_models.rds + wildcards: gene=ENSG00000251603 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000128606_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000128606_fitted_models.rds + jobid: 5858 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000128606_fitted_models.rds + wildcards: gene=ENSG00000128606 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000170471_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000170471_fitted_models.rds + jobid: 13358 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000170471_fitted_models.rds + wildcards: gene=ENSG00000170471 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000198768_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000198768_fitted_models.rds + jobid: 13478 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000198768_fitted_models.rds + wildcards: gene=ENSG00000198768 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000105866_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000105866_fitted_models.rds + jobid: 5484 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000105866_fitted_models.rds + wildcards: gene=ENSG00000105866 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000149115_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000149115_fitted_models.rds + jobid: 8079 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000149115_fitted_models.rds + wildcards: gene=ENSG00000149115 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000186260_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000186260_fitted_models.rds + jobid: 11469 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000186260_fitted_models.rds + wildcards: gene=ENSG00000186260 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000196557_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000196557_fitted_models.rds + jobid: 11305 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000196557_fitted_models.rds + wildcards: gene=ENSG00000196557 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000188215_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000188215_fitted_models.rds + jobid: 11515 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000188215_fitted_models.rds + wildcards: gene=ENSG00000188215 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000198677_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000198677_fitted_models.rds + jobid: 4195 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000198677_fitted_models.rds + wildcards: gene=ENSG00000198677 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000162344_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000162344_fitted_models.rds + jobid: 8335 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000162344_fitted_models.rds + wildcards: gene=ENSG00000162344 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000173093_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000173093_fitted_models.rds + jobid: 9850 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000173093_fitted_models.rds + wildcards: gene=ENSG00000173093 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000105642_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000105642_fitted_models.rds + jobid: 13975 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000105642_fitted_models.rds + wildcards: gene=ENSG00000105642 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000196267_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000196267_fitted_models.rds + jobid: 14530 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000196267_fitted_models.rds + wildcards: gene=ENSG00000196267 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000116688_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000116688_fitted_models.rds + jobid: 146 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000116688_fitted_models.rds + wildcards: gene=ENSG00000116688 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000134262_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000134262_fitted_models.rds + jobid: 821 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000134262_fitted_models.rds + wildcards: gene=ENSG00000134262 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000137216_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000137216_fitted_models.rds + jobid: 5006 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000137216_fitted_models.rds + wildcards: gene=ENSG00000137216 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000144589_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000144589_fitted_models.rds + jobid: 2412 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000144589_fitted_models.rds + wildcards: gene=ENSG00000144589 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000146587_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000146587_fitted_models.rds + jobid: 5427 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000146587_fitted_models.rds + wildcards: gene=ENSG00000146587 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000070495_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000070495_fitted_models.rds + jobid: 12792 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000070495_fitted_models.rds + wildcards: gene=ENSG00000070495 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000157637_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000157637_fitted_models.rds + jobid: 12837 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000157637_fitted_models.rds + wildcards: gene=ENSG00000157637 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000181284_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000181284_fitted_models.rds + jobid: 12118 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000181284_fitted_models.rds + wildcards: gene=ENSG00000181284 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000084731_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000084731_fitted_models.rds + jobid: 1618 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000084731_fitted_models.rds + wildcards: gene=ENSG00000084731 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000159069_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000159069_fitted_models.rds + jobid: 7768 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000159069_fitted_models.rds + wildcards: gene=ENSG00000159069 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000100014_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000100014_fitted_models.rds + jobid: 14803 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000100014_fitted_models.rds + wildcards: gene=ENSG00000100014 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000211455_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000211455_fitted_models.rds + jobid: 9404 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000211455_fitted_models.rds + wildcards: gene=ENSG00000211455 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000114982_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000114982_fitted_models.rds + jobid: 1950 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000114982_fitted_models.rds + wildcards: gene=ENSG00000114982 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000177842_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000177842_fitted_models.rds + jobid: 2670 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000177842_fitted_models.rds + wildcards: gene=ENSG00000177842 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000181097_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000181097_fitted_models.rds + jobid: 7155 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000181097_fitted_models.rds + wildcards: gene=ENSG00000181097 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000180739_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000180739_fitted_models.rds + jobid: 13800 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000180739_fitted_models.rds + wildcards: gene=ENSG00000180739 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000100056_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000100056_fitted_models.rds + jobid: 14730 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000100056_fitted_models.rds + wildcards: gene=ENSG00000100056 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000130829_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000130829_fitted_models.rds + jobid: 6601 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000130829_fitted_models.rds + wildcards: gene=ENSG00000130829 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000260924_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000260924_fitted_models.rds + jobid: 14731 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000260924_fitted_models.rds + wildcards: gene=ENSG00000260924 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000261069_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000261069_fitted_models.rds + jobid: 10787 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000261069_fitted_models.rds + wildcards: gene=ENSG00000261069 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000160695_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000160695_fitted_models.rds + jobid: 8567 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000160695_fitted_models.rds + wildcards: gene=ENSG00000160695 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000146828_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000146828_fitted_models.rds + jobid: 5822 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000146828_fitted_models.rds + wildcards: gene=ENSG00000146828 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000176909_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000176909_fitted_models.rds + jobid: 14432 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000176909_fitted_models.rds + wildcards: gene=ENSG00000176909 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000175984_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000175984_fitted_models.rds + jobid: 828 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000175984_fitted_models.rds + wildcards: gene=ENSG00000175984 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000168763_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000168763_fitted_models.rds + jobid: 1953 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000168763_fitted_models.rds + wildcards: gene=ENSG00000168763 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000145016_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000145016_fitted_models.rds + jobid: 3348 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000145016_fitted_models.rds + wildcards: gene=ENSG00000145016 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000024048_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000024048_fitted_models.rds + jobid: 4968 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000024048_fitted_models.rds + wildcards: gene=ENSG00000024048 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000166823_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000166823_fitted_models.rds + jobid: 11208 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000166823_fitted_models.rds + wildcards: gene=ENSG00000166823 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000067191_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000067191_fitted_models.rds + jobid: 12378 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000067191_fitted_models.rds + wildcards: gene=ENSG00000067191 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000185504_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000185504_fitted_models.rds + jobid: 12843 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000185504_fitted_models.rds + wildcards: gene=ENSG00000185504 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000129355_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000129355_fitted_models.rds + jobid: 13803 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000129355_fitted_models.rds + wildcards: gene=ENSG00000129355 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000087087_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000087087_fitted_models.rds + jobid: 5825 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000087087_fitted_models.rds + wildcards: gene=ENSG00000087087 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000101986_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000101986_fitted_models.rds + jobid: 6605 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000101986_fitted_models.rds + wildcards: gene=ENSG00000101986 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000138162_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000138162_fitted_models.rds + jobid: 9170 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000138162_fitted_models.rds + wildcards: gene=ENSG00000138162 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000173548_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000173548_fitted_models.rds + jobid: 11120 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000173548_fitted_models.rds + wildcards: gene=ENSG00000173548 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000141012_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000141012_fitted_models.rds + jobid: 11960 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000141012_fitted_models.rds + wildcards: gene=ENSG00000141012 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000197077_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000197077_fitted_models.rds + jobid: 14810 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000197077_fitted_models.rds + wildcards: gene=ENSG00000197077 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000136152_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000136152_fitted_models.rds + jobid: 10131 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000136152_fitted_models.rds + wildcards: gene=ENSG00000136152 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000174529_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000174529_fitted_models.rds + jobid: 1296 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000174529_fitted_models.rds + wildcards: gene=ENSG00000174529 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000115942_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000115942_fitted_models.rds + jobid: 2301 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000115942_fitted_models.rds + wildcards: gene=ENSG00000115942 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000164163_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000164163_fitted_models.rds + jobid: 3801 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000164163_fitted_models.rds + wildcards: gene=ENSG00000164163 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000164296_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000164296_fitted_models.rds + jobid: 4431 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000164296_fitted_models.rds + wildcards: gene=ENSG00000164296 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000146674_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000146674_fitted_models.rds + jobid: 5601 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000146674_fitted_models.rds + wildcards: gene=ENSG00000146674 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000185527_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000185527_fitted_models.rds + jobid: 12846 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000185527_fitted_models.rds + wildcards: gene=ENSG00000185527 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000140548_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000140548_fitted_models.rds + jobid: 11212 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000140548_fitted_models.rds + wildcards: gene=ENSG00000140548 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000159459_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000159459_fitted_models.rds + jobid: 10882 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000159459_fitted_models.rds + wildcards: gene=ENSG00000159459 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000010165_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000010165_fitted_models.rds + jobid: 1162 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000010165_fitted_models.rds + wildcards: gene=ENSG00000010165 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000155744_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000155744_fitted_models.rds + jobid: 2302 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000155744_fitted_models.rds + wildcards: gene=ENSG00000155744 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000127080_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000127080_fitted_models.rds + jobid: 7447 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000127080_fitted_models.rds + wildcards: gene=ENSG00000127080 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000242616_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000242616_fitted_models.rds + jobid: 7537 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000242616_fitted_models.rds + wildcards: gene=ENSG00000242616 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000125686_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000125686_fitted_models.rds + jobid: 12382 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000125686_fitted_models.rds + wildcards: gene=ENSG00000125686 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000142188_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000142188_fitted_models.rds + jobid: 15142 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000142188_fitted_models.rds + wildcards: gene=ENSG00000142188 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000123607_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000123607_fitted_models.rds + jobid: 2168 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000123607_fitted_models.rds + wildcards: gene=ENSG00000123607 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000070476_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000070476_fitted_models.rds + jobid: 3053 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000070476_fitted_models.rds + wildcards: gene=ENSG00000070476 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000198742_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000198742_fitted_models.rds + jobid: 5768 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000198742_fitted_models.rds + wildcards: gene=ENSG00000198742 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000108773_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000108773_fitted_models.rds + jobid: 12428 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000108773_fitted_models.rds + wildcards: gene=ENSG00000108773 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000176225_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000176225_fitted_models.rds + jobid: 13103 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000176225_fitted_models.rds + wildcards: gene=ENSG00000176225 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000178685_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000178685_fitted_models.rds + jobid: 7164 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000178685_fitted_models.rds + wildcards: gene=ENSG00000178685 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000169826_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000169826_fitted_models.rds + jobid: 8784 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000169826_fitted_models.rds + wildcards: gene=ENSG00000169826 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000174405_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000174405_fitted_models.rds + jobid: 10254 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000174405_fitted_models.rds + wildcards: gene=ENSG00000174405 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000111348_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000111348_fitted_models.rds + jobid: 9370 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000111348_fitted_models.rds + wildcards: gene=ENSG00000111348 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000161647_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000161647_fitted_models.rds + jobid: 12475 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000161647_fitted_models.rds + wildcards: gene=ENSG00000161647 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000185359_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000185359_fitted_models.rds + jobid: 12850 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000185359_fitted_models.rds + wildcards: gene=ENSG00000185359 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000144228_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000144228_fitted_models.rds + jobid: 2111 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000144228_fitted_models.rds + wildcards: gene=ENSG00000144228 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000118690_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000118690_fitted_models.rds + jobid: 5171 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000118690_fitted_models.rds + wildcards: gene=ENSG00000118690 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000177485_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000177485_fitted_models.rds + jobid: 6506 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000177485_fitted_models.rds + wildcards: gene=ENSG00000177485 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000184992_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000184992_fitted_models.rds + jobid: 9986 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000184992_fitted_models.rds + wildcards: gene=ENSG00000184992 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000184402_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000184402_fitted_models.rds + jobid: 13496 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000184402_fitted_models.rds + wildcards: gene=ENSG00000184402 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000186567_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000186567_fitted_models.rds + jobid: 14336 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000186567_fitted_models.rds + wildcards: gene=ENSG00000186567 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000223473_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000223473_fitted_models.rds + jobid: 5637 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000223473_fitted_models.rds + wildcards: gene=ENSG00000223473 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000231566_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000231566_fitted_models.rds + jobid: 6222 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000231566_fitted_models.rds + wildcards: gene=ENSG00000231566 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000148843_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000148843_fitted_models.rds + jobid: 9102 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000148843_fitted_models.rds + wildcards: gene=ENSG00000148843 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000158987_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000158987_fitted_models.rds + jobid: 4288 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000158987_fitted_models.rds + wildcards: gene=ENSG00000158987 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000084112_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000084112_fitted_models.rds + jobid: 9823 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000084112_fitted_models.rds + wildcards: gene=ENSG00000084112 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000125450_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000125450_fitted_models.rds + jobid: 12748 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000125450_fitted_models.rds + wildcards: gene=ENSG00000125450 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000271383_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000271383_fitted_models.rds + jobid: 899 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000271383_fitted_models.rds + wildcards: gene=ENSG00000271383 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000198933_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000198933_fitted_models.rds + jobid: 12539 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000198933_fitted_models.rds + wildcards: gene=ENSG00000198933 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000125447_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000125447_fitted_models.rds + jobid: 12749 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000125447_fitted_models.rds + wildcards: gene=ENSG00000125447 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000163959_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000163959_fitted_models.rds + jobid: 3330 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000163959_fitted_models.rds + wildcards: gene=ENSG00000163959 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000159674_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000159674_fitted_models.rds + jobid: 3375 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000159674_fitted_models.rds + wildcards: gene=ENSG00000159674 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000025423_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000025423_fitted_models.rds + jobid: 9615 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000025423_fitted_models.rds + wildcards: gene=ENSG00000025423 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000005001_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000005001_fitted_models.rds + jobid: 11371 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000005001_fitted_models.rds + wildcards: gene=ENSG00000005001 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000156869_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000156869_fitted_models.rds + jobid: 736 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000156869_fitted_models.rds + wildcards: gene=ENSG00000156869 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000197279_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000197279_fitted_models.rds + jobid: 4756 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000197279_fitted_models.rds + wildcards: gene=ENSG00000197279 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000154710_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000154710_fitted_models.rds + jobid: 5641 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000154710_fitted_models.rds + wildcards: gene=ENSG00000154710 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000196588_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000196588_fitted_models.rds + jobid: 14971 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000196588_fitted_models.rds + wildcards: gene=ENSG00000196588 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000126883_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000126883_fitted_models.rds + jobid: 7697 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000126883_fitted_models.rds + wildcards: gene=ENSG00000126883 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000139977_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000139977_fitted_models.rds + jobid: 10487 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000139977_fitted_models.rds + wildcards: gene=ENSG00000139977 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000005156_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000005156_fitted_models.rds + jobid: 12332 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000005156_fitted_models.rds + wildcards: gene=ENSG00000005156 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000163328_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000163328_fitted_models.rds + jobid: 2208 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000163328_fitted_models.rds + wildcards: gene=ENSG00000163328 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000074201_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000074201_fitted_models.rds + jobid: 8403 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000074201_fitted_models.rds + wildcards: gene=ENSG00000074201 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000170921_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000170921_fitted_models.rds + jobid: 12663 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000170921_fitted_models.rds + wildcards: gene=ENSG00000170921 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000128159_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000128159_fitted_models.rds + jobid: 15063 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000128159_fitted_models.rds + wildcards: gene=ENSG00000128159 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000005812_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000005812_fitted_models.rds + jobid: 10204 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000005812_fitted_models.rds + wildcards: gene=ENSG00000005812 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000163485_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000163485_fitted_models.rds + jobid: 1279 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000163485_fitted_models.rds + wildcards: gene=ENSG00000163485 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000135999_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000135999_fitted_models.rds + jobid: 2119 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000135999_fitted_models.rds + wildcards: gene=ENSG00000135999 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000272293_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000272293_fitted_models.rds + jobid: 6649 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000272293_fitted_models.rds + wildcards: gene=ENSG00000272293 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000213799_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000213799_fitted_models.rds + jobid: 14554 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000213799_fitted_models.rds + wildcards: gene=ENSG00000213799 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000272993_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000272993_fitted_models.rds + jobid: 905 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000272993_fitted_models.rds + wildcards: gene=ENSG00000272993 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000272523_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000272523_fitted_models.rds + jobid: 4220 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000272523_fitted_models.rds + wildcards: gene=ENSG00000272523 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000102221_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000102221_fitted_models.rds + jobid: 6230 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000102221_fitted_models.rds + wildcards: gene=ENSG00000102221 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000185340_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000185340_fitted_models.rds + jobid: 14840 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000185340_fitted_models.rds + wildcards: gene=ENSG00000185340 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000151422_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000151422_fitted_models.rds + jobid: 4221 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000151422_fitted_models.rds + wildcards: gene=ENSG00000151422 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000021762_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000021762_fitted_models.rds + jobid: 7866 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000021762_fitted_models.rds + wildcards: gene=ENSG00000021762 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000148841_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000148841_fitted_models.rds + jobid: 9111 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000148841_fitted_models.rds + wildcards: gene=ENSG00000148841 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000196363_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000196363_fitted_models.rds + jobid: 7732 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000196363_fitted_models.rds + wildcards: gene=ENSG00000196363 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000162073_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000162073_fitted_models.rds + jobid: 11377 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000162073_fitted_models.rds + wildcards: gene=ENSG00000162073 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000091039_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000091039_fitted_models.rds + jobid: 9712 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000091039_fitted_models.rds + wildcards: gene=ENSG00000091039 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000233849_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000233849_fitted_models.rds + jobid: 1837 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000233849_fitted_models.rds + wildcards: gene=ENSG00000233849 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000198799_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000198799_fitted_models.rds + jobid: 817 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000198799_fitted_models.rds + wildcards: gene=ENSG00000198799 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000249476_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000249476_fitted_models.rds + jobid: 4222 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000249476_fitted_models.rds + wildcards: gene=ENSG00000249476 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000147421_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000147421_fitted_models.rds + jobid: 6772 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000147421_fitted_models.rds + wildcards: gene=ENSG00000147421 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000100280_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000100280_fitted_models.rds + jobid: 14842 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000100280_fitted_models.rds + wildcards: gene=ENSG00000100280 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000196455_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000196455_fitted_models.rds + jobid: 3083 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000196455_fitted_models.rds + wildcards: gene=ENSG00000196455 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000274070_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000274070_fitted_models.rds + jobid: 5678 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000274070_fitted_models.rds + wildcards: gene=ENSG00000274070 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000247095_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000247095_fitted_models.rds + jobid: 7823 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000247095_fitted_models.rds + wildcards: gene=ENSG00000247095 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000009830_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000009830_fitted_models.rds + jobid: 10628 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000009830_fitted_models.rds + wildcards: gene=ENSG00000009830 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000130635_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000130635_fitted_models.rds + jobid: 7734 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000130635_fitted_models.rds + wildcards: gene=ENSG00000130635 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000130803_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000130803_fitted_models.rds + jobid: 13764 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000130803_fitted_models.rds + wildcards: gene=ENSG00000130803 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000116698_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000116698_fitted_models.rds + jobid: 1210 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000116698_fitted_models.rds + wildcards: gene=ENSG00000116698 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000144043_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000144043_fitted_models.rds + jobid: 1840 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000144043_fitted_models.rds + wildcards: gene=ENSG00000144043 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000163795_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000163795_fitted_models.rds + jobid: 1646 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000163795_fitted_models.rds + wildcards: gene=ENSG00000163795 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000181638_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000181638_fitted_models.rds + jobid: 7136 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000181638_fitted_models.rds + wildcards: gene=ENSG00000181638 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000089057_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000089057_fitted_models.rds + jobid: 13196 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000089057_fitted_models.rds + wildcards: gene=ENSG00000089057 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000170448_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000170448_fitted_models.rds + jobid: 3522 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000170448_fitted_models.rds + wildcards: gene=ENSG00000170448 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000204428_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000204428_fitted_models.rds + jobid: 4827 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000204428_fitted_models.rds + wildcards: gene=ENSG00000204428 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000167619_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000167619_fitted_models.rds + jobid: 14293 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000167619_fitted_models.rds + wildcards: gene=ENSG00000167619 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000204599_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000204599_fitted_models.rds + jobid: 4784 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000204599_fitted_models.rds + wildcards: gene=ENSG00000204599 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000231721_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000231721_fitted_models.rds + jobid: 5969 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000231721_fitted_models.rds + wildcards: gene=ENSG00000231721 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000185753_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000185753_fitted_models.rds + jobid: 6209 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000185753_fitted_models.rds + wildcards: gene=ENSG00000185753 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000148331_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000148331_fitted_models.rds + jobid: 7679 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000148331_fitted_models.rds + wildcards: gene=ENSG00000148331 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000181523_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000181523_fitted_models.rds + jobid: 12824 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000181523_fitted_models.rds + wildcards: gene=ENSG00000181523 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000105143_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000105143_fitted_models.rds + jobid: 13919 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000105143_fitted_models.rds + wildcards: gene=ENSG00000105143 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000008323_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000008323_fitted_models.rds + jobid: 9270 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000008323_fitted_models.rds + wildcards: gene=ENSG00000008323 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000188542_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000188542_fitted_models.rds + jobid: 2490 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000188542_fitted_models.rds + wildcards: gene=ENSG00000188542 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000280316_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000280316_fitted_models.rds + jobid: 1065 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000280316_fitted_models.rds + wildcards: gene=ENSG00000280316 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000180667_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000180667_fitted_models.rds + jobid: 1320 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000180667_fitted_models.rds + wildcards: gene=ENSG00000180667 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000068724_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000068724_fitted_models.rds + jobid: 1740 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000068724_fitted_models.rds + wildcards: gene=ENSG00000068724 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000204410_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000204410_fitted_models.rds + jobid: 4830 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000204410_fitted_models.rds + wildcards: gene=ENSG00000204410 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000154222_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000154222_fitted_models.rds + jobid: 556 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000154222_fitted_models.rds + wildcards: gene=ENSG00000154222 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000051382_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000051382_fitted_models.rds + jobid: 3121 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000051382_fitted_models.rds + wildcards: gene=ENSG00000051382 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000120805_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000120805_fitted_models.rds + jobid: 9781 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000120805_fitted_models.rds + wildcards: gene=ENSG00000120805 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000151500_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000151500_fitted_models.rds + jobid: 8642 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000151500_fitted_models.rds + wildcards: gene=ENSG00000151500 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000137968_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000137968_fitted_models.rds + jobid: 648 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000137968_fitted_models.rds + wildcards: gene=ENSG00000137968 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000166268_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000166268_fitted_models.rds + jobid: 9693 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000166268_fitted_models.rds + wildcards: gene=ENSG00000166268 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000260257_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000260257_fitted_models.rds + jobid: 13293 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000260257_fitted_models.rds + wildcards: gene=ENSG00000260257 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000107816_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000107816_fitted_models.rds + jobid: 9064 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000107816_fitted_models.rds + wildcards: gene=ENSG00000107816 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000125952_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000125952_fitted_models.rds + jobid: 10534 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000125952_fitted_models.rds + wildcards: gene=ENSG00000125952 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000244405_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000244405_fitted_models.rds + jobid: 3290 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000244405_fitted_models.rds + wildcards: gene=ENSG00000244405 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000155530_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000155530_fitted_models.rds + jobid: 5975 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000155530_fitted_models.rds + wildcards: gene=ENSG00000155530 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000231025_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000231025_fitted_models.rds + jobid: 9020 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000231025_fitted_models.rds + wildcards: gene=ENSG00000231025 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000273162_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000273162_fitted_models.rds + jobid: 9066 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000273162_fitted_models.rds + wildcards: gene=ENSG00000273162 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000116903_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000116903_fitted_models.rds + jobid: 1447 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000116903_fitted_models.rds + wildcards: gene=ENSG00000116903 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000178295_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000178295_fitted_models.rds + jobid: 1582 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000178295_fitted_models.rds + wildcards: gene=ENSG00000178295 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000148358_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000148358_fitted_models.rds + jobid: 7687 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000148358_fitted_models.rds + wildcards: gene=ENSG00000148358 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000186666_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000186666_fitted_models.rds + jobid: 9503 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000186666_fitted_models.rds + wildcards: gene=ENSG00000186666 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000227372_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000227372_fitted_models.rds + jobid: 68 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000227372_fitted_models.rds + wildcards: gene=ENSG00000227372 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000162378_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000162378_fitted_models.rds + jobid: 563 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000162378_fitted_models.rds + wildcards: gene=ENSG00000162378 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000260231_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000260231_fitted_models.rds + jobid: 6008 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000260231_fitted_models.rds + wildcards: gene=ENSG00000260231 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000273107_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000273107_fitted_models.rds + jobid: 8738 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000273107_fitted_models.rds + wildcards: gene=ENSG00000273107 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000182318_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000182318_fitted_models.rds + jobid: 14678 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000182318_fitted_models.rds + wildcards: gene=ENSG00000182318 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000233230_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000233230_fitted_models.rds + jobid: 1749 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000233230_fitted_models.rds + wildcards: gene=ENSG00000233230 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000018408_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000018408_fitted_models.rds + jobid: 3159 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000018408_fitted_models.rds + wildcards: gene=ENSG00000018408 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000267194_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000267194_fitted_models.rds + jobid: 12714 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000267194_fitted_models.rds + wildcards: gene=ENSG00000267194 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000117595_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000117595_fitted_models.rds + jobid: 1330 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000117595_fitted_models.rds + wildcards: gene=ENSG00000117595 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000005238_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000005238_fitted_models.rds + jobid: 7315 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000005238_fitted_models.rds + wildcards: gene=ENSG00000005238 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000107929_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000107929_fitted_models.rds + jobid: 8650 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000107929_fitted_models.rds + wildcards: gene=ENSG00000107929 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000088812_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000088812_fitted_models.rds + jobid: 13180 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000088812_fitted_models.rds + wildcards: gene=ENSG00000088812 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000148384_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000148384_fitted_models.rds + jobid: 7751 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000148384_fitted_models.rds + wildcards: gene=ENSG00000148384 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000156966_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000156966_fitted_models.rds + jobid: 2441 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000156966_fitted_models.rds + wildcards: gene=ENSG00000156966 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000186777_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000186777_fitted_models.rds + jobid: 3356 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000186777_fitted_models.rds + wildcards: gene=ENSG00000186777 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000106852_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000106852_fitted_models.rds + jobid: 7586 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000106852_fitted_models.rds + wildcards: gene=ENSG00000106852 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000117425_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000117425_fitted_models.rds + jobid: 507 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000117425_fitted_models.rds + wildcards: gene=ENSG00000117425 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000115993_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000115993_fitted_models.rds + jobid: 2307 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000115993_fitted_models.rds + wildcards: gene=ENSG00000115993 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000179094_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000179094_fitted_models.rds + jobid: 12147 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000179094_fitted_models.rds + wildcards: gene=ENSG00000179094 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000261485_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000261485_fitted_models.rds + jobid: 10063 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000261485_fitted_models.rds + wildcards: gene=ENSG00000261485 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000159399_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000159399_fitted_models.rds + jobid: 1888 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000159399_fitted_models.rds + wildcards: gene=ENSG00000159399 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000129315_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000129315_fitted_models.rds + jobid: 9478 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000129315_fitted_models.rds + wildcards: gene=ENSG00000129315 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000263715_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000263715_fitted_models.rds + jobid: 12523 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000263715_fitted_models.rds + wildcards: gene=ENSG00000263715 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000126107_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000126107_fitted_models.rds + jobid: 509 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000126107_fitted_models.rds + wildcards: gene=ENSG00000126107 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000072518_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000072518_fitted_models.rds + jobid: 8174 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000072518_fitted_models.rds + wildcards: gene=ENSG00000072518 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000103343_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000103343_fitted_models.rds + jobid: 11399 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000103343_fitted_models.rds + wildcards: gene=ENSG00000103343 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000178226_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000178226_fitted_models.rds + jobid: 11654 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000178226_fitted_models.rds + wildcards: gene=ENSG00000178226 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000050030_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000050030_fitted_models.rds + jobid: 6375 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000050030_fitted_models.rds + wildcards: gene=ENSG00000050030 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000107745_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000107745_fitted_models.rds + jobid: 8895 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000107745_fitted_models.rds + wildcards: gene=ENSG00000107745 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000148824_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000148824_fitted_models.rds + jobid: 9226 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000148824_fitted_models.rds + wildcards: gene=ENSG00000148824 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000170776_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000170776_fitted_models.rds + jobid: 11191 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000170776_fitted_models.rds + wildcards: gene=ENSG00000170776 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000163331_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000163331_fitted_models.rds + jobid: 2146 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000163331_fitted_models.rds + wildcards: gene=ENSG00000163331 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000145780_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000145780_fitted_models.rds + jobid: 4246 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000145780_fitted_models.rds + wildcards: gene=ENSG00000145780 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000078269_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000078269_fitted_models.rds + jobid: 5341 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000078269_fitted_models.rds + wildcards: gene=ENSG00000078269 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000094631_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000094631_fitted_models.rds + jobid: 6256 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000094631_fitted_models.rds + wildcards: gene=ENSG00000094631 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000136504_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000136504_fitted_models.rds + jobid: 12571 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000136504_fitted_models.rds + wildcards: gene=ENSG00000136504 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000100982_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000100982_fitted_models.rds + jobid: 13411 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000100982_fitted_models.rds + wildcards: gene=ENSG00000100982 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000058453_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000058453_fitted_models.rds + jobid: 182 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000058453_fitted_models.rds + wildcards: gene=ENSG00000058453 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000151388_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000151388_fitted_models.rds + jobid: 3992 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000151388_fitted_models.rds + wildcards: gene=ENSG00000151388 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000242539_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000242539_fitted_models.rds + jobid: 3243 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000242539_fitted_models.rds + wildcards: gene=ENSG00000242539 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000104490_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000104490_fitted_models.rds + jobid: 7023 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000104490_fitted_models.rds + wildcards: gene=ENSG00000104490 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000267892_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000267892_fitted_models.rds + jobid: 14208 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000267892_fitted_models.rds + wildcards: gene=ENSG00000267892 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000285230_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000285230_fitted_models.rds + jobid: 15288 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000285230_fitted_models.rds + wildcards: gene=ENSG00000285230 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000094916_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000094916_fitted_models.rds + jobid: 9559 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000094916_fitted_models.rds + wildcards: gene=ENSG00000094916 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000077380_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000077380_fitted_models.rds + jobid: 2194 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000077380_fitted_models.rds + wildcards: gene=ENSG00000077380 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000282024_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000282024_fitted_models.rds + jobid: 4669 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000282024_fitted_models.rds + wildcards: gene=ENSG00000282024 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000213462_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000213462_fitted_models.rds + jobid: 5629 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000213462_fitted_models.rds + wildcards: gene=ENSG00000213462 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000271937_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000271937_fitted_models.rds + jobid: 2690 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000271937_fitted_models.rds + wildcards: gene=ENSG00000271937 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000120314_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000120314_fitted_models.rds + jobid: 4370 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000120314_fitted_models.rds + wildcards: gene=ENSG00000120314 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000100083_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000100083_fitted_models.rds + jobid: 14915 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000100083_fitted_models.rds + wildcards: gene=ENSG00000100083 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000203441_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000203441_fitted_models.rds + jobid: 10236 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000203441_fitted_models.rds + wildcards: gene=ENSG00000203441 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000221944_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000221944_fitted_models.rds + jobid: 2451 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000221944_fitted_models.rds + wildcards: gene=ENSG00000221944 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000164951_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000164951_fitted_models.rds + jobid: 6981 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000164951_fitted_models.rds + wildcards: gene=ENSG00000164951 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000005339_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000005339_fitted_models.rds + jobid: 11406 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000005339_fitted_models.rds + wildcards: gene=ENSG00000005339 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000134444_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000134444_fitted_models.rds + jobid: 13086 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000134444_fitted_models.rds + wildcards: gene=ENSG00000134444 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000244242_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000244242_fitted_models.rds + jobid: 7852 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000244242_fitted_models.rds + wildcards: gene=ENSG00000244242 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000116641_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000116641_fitted_models.rds + jobid: 607 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000116641_fitted_models.rds + wildcards: gene=ENSG00000116641 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000146067_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000146067_fitted_models.rds + jobid: 4552 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000146067_fitted_models.rds + wildcards: gene=ENSG00000146067 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000218537_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000218537_fitted_models.rds + jobid: 14797 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000218537_fitted_models.rds + wildcards: gene=ENSG00000218537 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000197147_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000197147_fitted_models.rds + jobid: 698 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000197147_fitted_models.rds + wildcards: gene=ENSG00000197147 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000156140_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000156140_fitted_models.rds + jobid: 3578 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000156140_fitted_models.rds + wildcards: gene=ENSG00000156140 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000232434_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000232434_fitted_models.rds + jobid: 7763 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000232434_fitted_models.rds + wildcards: gene=ENSG00000232434 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000166575_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000166575_fitted_models.rds + jobid: 8438 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000166575_fitted_models.rds + wildcards: gene=ENSG00000166575 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000163626_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000163626_fitted_models.rds + jobid: 3579 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000163626_fitted_models.rds + wildcards: gene=ENSG00000163626 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000242802_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000242802_fitted_models.rds + jobid: 5424 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000242802_fitted_models.rds + wildcards: gene=ENSG00000242802 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000140807_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000140807_fitted_models.rds + jobid: 11694 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000140807_fitted_models.rds + wildcards: gene=ENSG00000140807 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000272269_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000272269_fitted_models.rds + jobid: 4675 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000272269_fitted_models.rds + wildcards: gene=ENSG00000272269 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000186814_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000186814_fitted_models.rds + jobid: 13000 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000186814_fitted_models.rds + wildcards: gene=ENSG00000186814 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000171791_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000171791_fitted_models.rds + jobid: 13090 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000171791_fitted_models.rds + wildcards: gene=ENSG00000171791 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000173705_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000173705_fitted_models.rds + jobid: 2636 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000173705_fitted_models.rds + wildcards: gene=ENSG00000173705 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000109323_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000109323_fitted_models.rds + jobid: 3686 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000109323_fitted_models.rds + wildcards: gene=ENSG00000109323 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000104313_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000104313_fitted_models.rds + jobid: 6911 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000104313_fitted_models.rds + wildcards: gene=ENSG00000104313 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000110497_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000110497_fitted_models.rds + jobid: 8051 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000110497_fitted_models.rds + wildcards: gene=ENSG00000110497 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000140750_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000140750_fitted_models.rds + jobid: 11546 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000140750_fitted_models.rds + wildcards: gene=ENSG00000140750 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000152683_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000152683_fitted_models.rds + jobid: 1677 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000152683_fitted_models.rds + wildcards: gene=ENSG00000152683 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000132405_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000132405_fitted_models.rds + jobid: 3432 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000132405_fitted_models.rds + wildcards: gene=ENSG00000132405 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000105976_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000105976_fitted_models.rds + jobid: 5907 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000105976_fitted_models.rds + wildcards: gene=ENSG00000105976 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000228065_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000228065_fitted_models.rds + jobid: 8847 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000228065_fitted_models.rds + wildcards: gene=ENSG00000228065 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000143952_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000143952_fitted_models.rds + jobid: 1798 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000143952_fitted_models.rds + wildcards: gene=ENSG00000143952 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000181472_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000181472_fitted_models.rds + jobid: 5323 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000181472_fitted_models.rds + wildcards: gene=ENSG00000181472 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000128602_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000128602_fitted_models.rds + jobid: 5953 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000128602_fitted_models.rds + wildcards: gene=ENSG00000128602 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000270006_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000270006_fitted_models.rds + jobid: 11938 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000270006_fitted_models.rds + wildcards: gene=ENSG00000270006 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000141956_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000141956_fitted_models.rds + jobid: 15194 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000141956_fitted_models.rds + wildcards: gene=ENSG00000141956 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000233757_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000233757_fitted_models.rds + jobid: 1935 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000233757_fitted_models.rds + wildcards: gene=ENSG00000233757 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000151690_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000151690_fitted_models.rds + jobid: 2265 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000151690_fitted_models.rds + wildcards: gene=ENSG00000151690 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000176476_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000176476_fitted_models.rds + jobid: 11566 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000176476_fitted_models.rds + wildcards: gene=ENSG00000176476 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000109066_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000109066_fitted_models.rds + jobid: 12736 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000109066_fitted_models.rds + wildcards: gene=ENSG00000109066 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000233654_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000233654_fitted_models.rds + jobid: 2267 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000233654_fitted_models.rds + wildcards: gene=ENSG00000233654 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000183873_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000183873_fitted_models.rds + jobid: 2657 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000183873_fitted_models.rds + wildcards: gene=ENSG00000183873 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000273156_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000273156_fitted_models.rds + jobid: 3617 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000273156_fitted_models.rds + wildcards: gene=ENSG00000273156 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000106624_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000106624_fitted_models.rds + jobid: 5582 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000106624_fitted_models.rds + wildcards: gene=ENSG00000106624 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000176406_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000176406_fitted_models.rds + jobid: 7037 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000176406_fitted_models.rds + wildcards: gene=ENSG00000176406 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000139973_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000139973_fitted_models.rds + jobid: 10517 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000139973_fitted_models.rds + wildcards: gene=ENSG00000139973 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000226479_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000226479_fitted_models.rds + jobid: 2058 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000226479_fitted_models.rds + wildcards: gene=ENSG00000226479 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000184194_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000184194_fitted_models.rds + jobid: 6288 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000184194_fitted_models.rds + wildcards: gene=ENSG00000184194 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000152223_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000152223_fitted_models.rds + jobid: 13023 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000152223_fitted_models.rds + wildcards: gene=ENSG00000152223 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000093000_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000093000_fitted_models.rds + jobid: 15033 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000093000_fitted_models.rds + wildcards: gene=ENSG00000093000 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000179796_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000179796_fitted_models.rds + jobid: 2614 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000179796_fitted_models.rds + wildcards: gene=ENSG00000179796 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000204071_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000204071_fitted_models.rds + jobid: 6424 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000204071_fitted_models.rds + wildcards: gene=ENSG00000204071 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000109089_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000109089_fitted_models.rds + jobid: 12739 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000109089_fitted_models.rds + wildcards: gene=ENSG00000109089 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000225975_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000225975_fitted_models.rds + jobid: 14164 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000225975_fitted_models.rds + wildcards: gene=ENSG00000225975 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000124688_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000124688_fitted_models.rds + jobid: 5000 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000124688_fitted_models.rds + wildcards: gene=ENSG00000124688 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000228748_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000228748_fitted_models.rds + jobid: 8930 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000228748_fitted_models.rds + wildcards: gene=ENSG00000228748 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000075461_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000075461_fitted_models.rds + jobid: 12695 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000075461_fitted_models.rds + wildcards: gene=ENSG00000075461 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000220201_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000220201_fitted_models.rds + jobid: 13790 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000220201_fitted_models.rds + wildcards: gene=ENSG00000220201 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000214113_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000214113_fitted_models.rds + jobid: 4626 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000214113_fitted_models.rds + wildcards: gene=ENSG00000214113 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000270189_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000270189_fitted_models.rds + jobid: 6291 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000270189_fitted_models.rds + wildcards: gene=ENSG00000270189 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000152779_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000152779_fitted_models.rds + jobid: 8976 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000152779_fitted_models.rds + wildcards: gene=ENSG00000152779 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000276644_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000276644_fitted_models.rds + jobid: 10191 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000276644_fitted_models.rds + wildcards: gene=ENSG00000276644 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000021776_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000021776_fitted_models.rds + jobid: 10821 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000021776_fitted_models.rds + wildcards: gene=ENSG00000021776 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000167807_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000167807_fitted_models.rds + jobid: 13791 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000167807_fitted_models.rds + wildcards: gene=ENSG00000167807 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000007545_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000007545_fitted_models.rds + jobid: 11317 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000007545_fitted_models.rds + wildcards: gene=ENSG00000007545 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000163467_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000163467_fitted_models.rds + jobid: 1057 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000163467_fitted_models.rds + wildcards: gene=ENSG00000163467 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000115207_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000115207_fitted_models.rds + jobid: 1642 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000115207_fitted_models.rds + wildcards: gene=ENSG00000115207 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000074054_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000074054_fitted_models.rds + jobid: 2062 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000074054_fitted_models.rds + wildcards: gene=ENSG00000074054 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000015676_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000015676_fitted_models.rds + jobid: 5587 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000015676_fitted_models.rds + wildcards: gene=ENSG00000015676 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000213079_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000213079_fitted_models.rds + jobid: 5332 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000213079_fitted_models.rds + wildcards: gene=ENSG00000213079 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000146826_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000146826_fitted_models.rds + jobid: 5797 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000146826_fitted_models.rds + wildcards: gene=ENSG00000146826 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000261732_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000261732_fitted_models.rds + jobid: 11318 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000261732_fitted_models.rds + wildcards: gene=ENSG00000261732 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000152133_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000152133_fitted_models.rds + jobid: 1688 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000152133_fitted_models.rds + wildcards: gene=ENSG00000152133 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000161847_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000161847_fitted_models.rds + jobid: 13793 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000161847_fitted_models.rds + wildcards: gene=ENSG00000161847 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000206559_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000206559_fitted_models.rds + jobid: 2619 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000206559_fitted_models.rds + wildcards: gene=ENSG00000206559 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000158560_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000158560_fitted_models.rds + jobid: 5754 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000158560_fitted_models.rds + wildcards: gene=ENSG00000158560 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000125449_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000125449_fitted_models.rds + jobid: 12744 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000125449_fitted_models.rds + wildcards: gene=ENSG00000125449 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000104885_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000104885_fitted_models.rds + jobid: 13614 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000104885_fitted_models.rds + wildcards: gene=ENSG00000104885 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000197863_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000197863_fitted_models.rds + jobid: 14169 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000197863_fitted_models.rds + wildcards: gene=ENSG00000197863 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000233056_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000233056_fitted_models.rds + jobid: 15204 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000233056_fitted_models.rds + wildcards: gene=ENSG00000233056 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000105953_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000105953_fitted_models.rds + jobid: 5590 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000105953_fitted_models.rds + wildcards: gene=ENSG00000105953 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000078114_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000078114_fitted_models.rds + jobid: 8725 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000078114_fitted_models.rds + wildcards: gene=ENSG00000078114 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000132953_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000132953_fitted_models.rds + jobid: 10030 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000132953_fitted_models.rds + wildcards: gene=ENSG00000132953 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000198815_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000198815_fitted_models.rds + jobid: 461 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000198815_fitted_models.rds + wildcards: gene=ENSG00000198815 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000281358_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000281358_fitted_models.rds + jobid: 2801 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000281358_fitted_models.rds + wildcards: gene=ENSG00000281358 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000161202_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000161202_fitted_models.rds + jobid: 3266 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000161202_fitted_models.rds + wildcards: gene=ENSG00000161202 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000121900_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000121900_fitted_models.rds + jobid: 372 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000121900_fitted_models.rds + wildcards: gene=ENSG00000121900 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000173889_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000173889_fitted_models.rds + jobid: 3222 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000173889_fitted_models.rds + wildcards: gene=ENSG00000173889 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000008256_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000008256_fitted_models.rds + jobid: 5442 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000008256_fitted_models.rds + wildcards: gene=ENSG00000008256 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000179361_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000179361_fitted_models.rds + jobid: 11098 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000179361_fitted_models.rds + wildcards: gene=ENSG00000179361 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000181873_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000181873_fitted_models.rds + jobid: 1423 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000181873_fitted_models.rds + wildcards: gene=ENSG00000181873 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000273466_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000273466_fitted_models.rds + jobid: 2383 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000273466_fitted_models.rds + wildcards: gene=ENSG00000273466 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000268220_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000268220_fitted_models.rds + jobid: 3223 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000268220_fitted_models.rds + wildcards: gene=ENSG00000268220 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000151726_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000151726_fitted_models.rds + jobid: 3898 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000151726_fitted_models.rds + wildcards: gene=ENSG00000151726 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000104213_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000104213_fitted_models.rds + jobid: 6703 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000104213_fitted_models.rds + wildcards: gene=ENSG00000104213 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000019485_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000019485_fitted_models.rds + jobid: 8038 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000019485_fitted_models.rds + wildcards: gene=ENSG00000019485 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000260621_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000260621_fitted_models.rds + jobid: 11713 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000260621_fitted_models.rds + wildcards: gene=ENSG00000260621 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000108669_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000108669_fitted_models.rds + jobid: 12809 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000108669_fitted_models.rds + wildcards: gene=ENSG00000108669 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000141858_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000141858_fitted_models.rds + jobid: 13904 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000141858_fitted_models.rds + wildcards: gene=ENSG00000141858 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000215012_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000215012_fitted_models.rds + jobid: 14744 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000215012_fitted_models.rds + wildcards: gene=ENSG00000215012 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000132879_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000132879_fitted_models.rds + jobid: 135 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000132879_fitted_models.rds + wildcards: gene=ENSG00000132879 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000151150_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000151150_fitted_models.rds + jobid: 8835 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000151150_fitted_models.rds + wildcards: gene=ENSG00000151150 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000092439_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000092439_fitted_models.rds + jobid: 10935 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000092439_fitted_models.rds + wildcards: gene=ENSG00000092439 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000141499_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000141499_fitted_models.rds + jobid: 12135 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000141499_fitted_models.rds + wildcards: gene=ENSG00000141499 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000267698_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000267698_fitted_models.rds + jobid: 14145 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000267698_fitted_models.rds + wildcards: gene=ENSG00000267698 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000167178_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000167178_fitted_models.rds + jobid: 11086 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000167178_fitted_models.rds + wildcards: gene=ENSG00000167178 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000083814_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000083814_fitted_models.rds + jobid: 14656 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000083814_fitted_models.rds + wildcards: gene=ENSG00000083814 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000103512_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000103512_fitted_models.rds + jobid: 11477 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000103512_fitted_models.rds + wildcards: gene=ENSG00000103512 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000160094_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000160094_fitted_models.rds + jobid: 377 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000160094_fitted_models.rds + wildcards: gene=ENSG00000160094 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000009413_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000009413_fitted_models.rds + jobid: 5192 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000009413_fitted_models.rds + wildcards: gene=ENSG00000009413 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000171219_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000171219_fitted_models.rds + jobid: 8207 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000171219_fitted_models.rds + wildcards: gene=ENSG00000171219 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000152443_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000152443_fitted_models.rds + jobid: 14657 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000152443_fitted_models.rds + wildcards: gene=ENSG00000152443 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000126767_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000126767_fitted_models.rds + jobid: 6243 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000126767_fitted_models.rds + wildcards: gene=ENSG00000126767 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000140497_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000140497_fitted_models.rds + jobid: 11103 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000140497_fitted_models.rds + wildcards: gene=ENSG00000140497 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000083828_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000083828_fitted_models.rds + jobid: 14658 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000083828_fitted_models.rds + wildcards: gene=ENSG00000083828 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000225880_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000225880_fitted_models.rds + jobid: 4 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000225880_fitted_models.rds + wildcards: gene=ENSG00000225880 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000112941_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000112941_fitted_models.rds + jobid: 3949 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000112941_fitted_models.rds + wildcards: gene=ENSG00000112941 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000155974_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000155974_fitted_models.rds + jobid: 9679 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000155974_fitted_models.rds + wildcards: gene=ENSG00000155974 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000231742_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000231742_fitted_models.rds + jobid: 13444 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000231742_fitted_models.rds + wildcards: gene=ENSG00000231742 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000198879_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000198879_fitted_models.rds + jobid: 8675 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000198879_fitted_models.rds + wildcards: gene=ENSG00000198879 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000230368_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000230368_fitted_models.rds + jobid: 5 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000230368_fitted_models.rds + wildcards: gene=ENSG00000230368 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000121904_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000121904_fitted_models.rds + jobid: 380 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000121904_fitted_models.rds + wildcards: gene=ENSG00000121904 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000181826_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000181826_fitted_models.rds + jobid: 3485 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000181826_fitted_models.rds + wildcards: gene=ENSG00000181826 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000149503_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000149503_fitted_models.rds + jobid: 8135 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000149503_fitted_models.rds + wildcards: gene=ENSG00000149503 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000165417_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000165417_fitted_models.rds + jobid: 10641 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000165417_fitted_models.rds + wildcards: gene=ENSG00000165417 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000127334_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000127334_fitted_models.rds + jobid: 9681 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000127334_fitted_models.rds + wildcards: gene=ENSG00000127334 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000151657_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000151657_fitted_models.rds + jobid: 8677 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000151657_fitted_models.rds + wildcards: gene=ENSG00000151657 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000178718_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000178718_fitted_models.rds + jobid: 11107 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000178718_fitted_models.rds + wildcards: gene=ENSG00000178718 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000118454_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000118454_fitted_models.rds + jobid: 637 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000118454_fitted_models.rds + wildcards: gene=ENSG00000118454 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000114346_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000114346_fitted_models.rds + jobid: 3232 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000114346_fitted_models.rds + wildcards: gene=ENSG00000114346 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000277749_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000277749_fitted_models.rds + jobid: 11092 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000277749_fitted_models.rds + wildcards: gene=ENSG00000277749 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000099904_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000099904_fitted_models.rds + jobid: 14752 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000099904_fitted_models.rds + wildcards: gene=ENSG00000099904 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000249115_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000249115_fitted_models.rds + jobid: 14123 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000249115_fitted_models.rds + wildcards: gene=ENSG00000249115 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000196357_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000196357_fitted_models.rds + jobid: 14153 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000196357_fitted_models.rds + wildcards: gene=ENSG00000196357 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000185728_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000185728_fitted_models.rds + jobid: 6879 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000185728_fitted_models.rds + wildcards: gene=ENSG00000185728 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000103404_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000103404_fitted_models.rds + jobid: 11529 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000103404_fitted_models.rds + wildcards: gene=ENSG00000103404 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000142449_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000142449_fitted_models.rds + jobid: 13749 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000142449_fitted_models.rds + wildcards: gene=ENSG00000142449 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000160305_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000160305_fitted_models.rds + jobid: 15249 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000160305_fitted_models.rds + wildcards: gene=ENSG00000160305 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000163867_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000163867_fitted_models.rds + jobid: 385 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000163867_fitted_models.rds + wildcards: gene=ENSG00000163867 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000198925_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000198925_fitted_models.rds + jobid: 2395 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000198925_fitted_models.rds + wildcards: gene=ENSG00000198925 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/ENSG00000272767_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000272767_fitted_models.rds + jobid: 8845 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000272767_fitted_models.rds + wildcards: gene=ENSG00000272767 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Tue Apr 19 07:31:45 2022] +localrule all: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000279457_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000228463_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000237491_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000225880_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000230368_fitted_models.rds, 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/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000142449_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000125447_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000164163_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000105642_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000077380_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000151657_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000112941_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000173653_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000050030_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000168310_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000132953_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000185340_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000179361_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000267194_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/ENSG00000168152_fitted_models.rds + +Job counts: + count jobs + 1 all + 441 partition_variance + 442 +This was a dry-run (flag -n). The order of jobs does not reflect the order of execution. diff --git a/Variance/post_review_all_cells/prepare_data.R b/Variance/post_review_all_cells/prepare_data.R new file mode 100644 index 0000000..8f65bea --- /dev/null +++ b/Variance/post_review_all_cells/prepare_data.R @@ -0,0 +1,12 @@ +library(Seurat) +liberary(tidyverse) +library(dplyr) +library(data.table) + + +##### Read in seurat with genes ##### +seurat <- readRDS("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds") + +dir.create("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/", recursive = TRUE) + +fwrite(data.table(Gene = rownames(seurat)), "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/seurat_integrated_Sydney_1pct_expressing_genes.tsv", sep = "\t") diff --git a/Variance/post_review_all_cells/variance_partition_all_cells_combine.R b/Variance/post_review_all_cells/variance_partition_all_cells_combine.R new file mode 100644 index 0000000..24d8383 --- /dev/null +++ b/Variance/post_review_all_cells/variance_partition_all_cells_combine.R @@ -0,0 +1,707 @@ +##### Reason: combine the results for the variance explained by different factors for each gene +##### Author: Drew Neavin +##### Date: 14 March, 2022 + + +##### Load in libraries ##### +library(data.table) +library(tidyverse) +library(ggridges) +library(raincloudplots) +library(ggdist) +library(clusterProfiler) +library(org.Hs.eg.db) +library(GOSemSim) +library(RColorBrewer) + + + +##### Set up directories ##### +dir <- "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/" +icc_dir <- "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/" +icc_interaction_dir <- "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc_interaction/" +outdir <- "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/combined/" + +dir.create(outdir, recursive = TRUE) + + +vars <- c("Line", "Village", "Cryopreserved", "Site", "Replicate","Line:Village", "Line:Cryopreserved", "Line:Site", "Village:Cryopreserved","Village:Site", "Replicate:Village", "Replicate:Line","Replicate:Cryopreserved", "Replicate:Site", "Residual") +var_colors <- c("#4734a9", rev(c("#115cc7", "#a4c3c8", "#499090", "#405940", "#685a54", "#f7d312", "#f8bf33", "#e4910e", "#f65d19", "#931519", "#f2c1ce", "#e17aab", "#a186aa")), "gray90") +names(var_colors) <- vars + + + + +##### Get list of icc files ##### +icc_files <- list.files(icc_dir) + + + +##### Read in icc results ##### +icc_results_list <- lapply(icc_files, function(x){ + readRDS(paste0(icc_dir,x)) +}) +names(icc_results_list) <- icc_files + + + +##### Get list of icc interaction files ##### +icc_interaction_files <- list.files(icc_interaction_dir, pattern = "_icc.rds") + + + +##### Read in icc results ##### +icc_interaction_results_list <- lapply(icc_interaction_files, function(x){ + readRDS(paste0(icc_interaction_dir,x)) +}) +names(icc_interaction_results_list) <- icc_interaction_files + + + +##### Merge icc results into a single data.table ##### +icc_dt <- do.call(rbind, icc_results_list) + +icc_dt$percent_round <- round(icc_dt$percent) + +icc_dt$grp <- factor(icc_dt$grp, levels= rev(vars)) + +group_size <- data.table(table(icc_dt$grp)) +colnames(group_size) <- c("grp", "size") +group_size$grp_size <- paste0(group_size$grp, "\nN = ", group_size$size) + +icc_dt <- group_size[icc_dt, on = "grp"] +icc_dt$grp_size <- factor(icc_dt$grp_size, levels = unique(group_size$grp_size)) + + +##### Merge icc_interaction results into a single data.table ##### +icc_interaction_dt <- do.call(rbind, icc_interaction_results_list) + +icc_interaction_dt$percent_round <- round(icc_interaction_dt$percent) + +icc_interaction_dt$grp <- factor(icc_interaction_dt$grp, levels= rev(vars)) + +group_size <- data.table(table(icc_interaction_dt$grp)) +colnames(group_size) <- c("grp", "size") +group_size$grp_size <- paste0(group_size$grp, "\nN = ", group_size$size) + +icc_interaction_dt <- group_size[icc_interaction_dt, on = "grp"] +icc_interaction_dt$grp_size <- factor(icc_interaction_dt$grp_size, levels = unique(group_size$grp_size)) + +### *** Need to add individual effects without interaction in to interaction dt *** ### +icc_interaction_plus_dt <- rbind(icc_interaction_dt, icc_dt[!(gene %in% icc_interaction_dt$gene)]) + + +group_size <- data.table(table(icc_interaction_plus_dt$grp)) +colnames(group_size) <- c("grp", "size") +group_size$grp_size <- paste0(group_size$grp, "\nN = ", group_size$size) + +icc_interaction_plus_dt <- group_size[icc_interaction_plus_dt, on = "grp"] +icc_interaction_plus_dt$grp_size <- factor(icc_interaction_plus_dt$grp_size, levels = unique(group_size$grp_size)) + + + +##### Check difference in percent explained with and without interactions ##### +icc_interaction_dt_joined <- icc_dt[icc_interaction_dt, on = c("grp", "gene")] + +icc_interaction_dt_joined$difference <- icc_interaction_dt_joined$percent - icc_interaction_dt_joined$i.percent + + +pRaincloud_dif <- ggplot(icc_interaction_dt_joined, aes(x = difference, y = factor(grp_size, levels = rev(levels(grp_size))), fill = factor(grp, levels = rev(vars)))) + + geom_density_ridges(stat = "binline", bins = 90, scale = 0.7, draw_baseline = FALSE, aes(height =..ndensity..), alpha = 0.75) + + geom_boxplot(size = 0.5,width = .15, outlier.size = 0.25, position = position_nudge(y=-0.12), alpha = 0.75) + + # coord_cartesian(xlim = c(1.2, NA), clip = "off") + + theme_classic() + + theme(axis.title.y=element_blank()) + + xlab("Percent Variance Explained") + + scale_y_discrete(expand = c(0.03, 0)) + + scale_fill_manual(values = var_colors) + +ggsave(pRaincloud_dif, filename = paste0(outdir, "variance_explained_interaction_difference_raincloud.png"), height = 8, width = 7) +ggsave(pRaincloud_dif, filename = paste0(outdir, "variance_explained_interaction_difference_raincloud.pdf"), height = 8, width = 7) + + + +##### Make a figure of stacked variance explained ##### +### Order based on line variance explained ### +genes_list <- list() + +for (group in vars){ + genes_list[[group]] <- icc_dt[grp == group][rev(order(percent_round))]$gene +} + +genes <- unique(unlist(genes_list)) + +icc_dt$gene <- factor(icc_dt$gene, levels = genes) + +icc_dt$grp <- factor(icc_dt$grp, levels= rev(vars)) + + + +pRaincloud <- ggplot(icc_dt, aes(x = percent, y = factor(grp_size, levels = rev(levels(grp_size))), fill = factor(grp, levels = rev(vars)))) + + geom_density_ridges(stat = "binline", bins = 90, scale = 0.7, draw_baseline = FALSE, aes(height =..ndensity..), alpha = 0.75) + + geom_boxplot(size = 0.5,width = .15, outlier.size = 0.25, position = position_nudge(y=-0.12), alpha = 0.75) + + coord_cartesian(xlim = c(1.2, NA), clip = "off") + + theme_classic() + + theme(axis.title.y=element_blank()) + + xlab("Percent Variance Explained") + + scale_y_discrete(expand = c(0.03, 0)) + + scale_fill_manual(values = var_colors) + +ggsave(pRaincloud, filename = paste0(outdir, "variance_explained_raincloud.png"), height = 8, width = 7) +ggsave(pRaincloud, filename = paste0(outdir, "variance_explained_raincloud.pdf"), height = 8, width = 7) + + + +icc_interaction_plus_dt$grp_size <- factor(icc_interaction_plus_dt$grp_size, levels = c(unique(grep("^Line\nN = ", icc_interaction_plus_dt$grp_size, value = TRUE)), + unique(grep("^Village\nN = ", icc_interaction_plus_dt$grp_size, value = TRUE)), + unique(grep("^Site\nN = ", icc_interaction_plus_dt$grp_size, value = TRUE)), + unique(grep("^Cryopreserved\nN =", icc_interaction_plus_dt$grp_size, value = TRUE)), + unique(grep("^Replicate\nN =", icc_interaction_plus_dt$grp_size, value = TRUE)), + unique(grep("Line:Village\nN =", icc_interaction_plus_dt$grp_size, value = TRUE)), + unique(grep("Line:Site\nN =", icc_interaction_plus_dt$grp_size, value = TRUE)), + unique(grep("Line:Cryopreserved\nN =", icc_interaction_plus_dt$grp_size, value = TRUE)), + unique(grep("Village:Site\nN =", icc_interaction_plus_dt$grp_size, value = TRUE)), + unique(grep("Village:Cryopreserved\nN =", icc_interaction_plus_dt$grp_size, value = TRUE)), + unique(grep("Replicate:Village\nN ", icc_interaction_plus_dt$grp_size, value = TRUE)), + unique(grep("Replicate:Line\nN ", icc_interaction_plus_dt$grp_size, value = TRUE)), + unique(grep("Replicate:Site\nN ", icc_interaction_plus_dt$grp_size, value = TRUE)), + unique(grep("Replicate:Cryopreserved\nN ", icc_interaction_plus_dt$grp_size, value = TRUE)), + unique(grep("Residual\nN = ", icc_interaction_plus_dt$grp_size, value = TRUE)))) + + +pRaincloud_interaction <- ggplot(icc_interaction_plus_dt, aes(x = percent, y = grp_size, fill = factor(grp, levels = rev(vars)))) + + geom_density_ridges(stat = "binline", bins = 100, scale = 0.7, draw_baseline = FALSE, aes(height =..ndensity..), alpha = 0.75) + + geom_boxplot(size = 0.5,width = .15, outlier.size = 0.25, position = position_nudge(y=-0.12), alpha = 0.75) + + coord_cartesian(xlim = c(1.2, NA), clip = "off") + + theme_classic() + + theme(axis.title.y=element_blank()) + + xlab("Percent Variance Explained") + + scale_y_discrete(expand = c(0.03, 0)) + + scale_fill_manual(values = var_colors) + + geom_vline(xintercept = 1, linetype = "dashed", color = "red") + +ggsave(pRaincloud_interaction, filename = paste0(outdir, "variance_explained_raincloud_interaction.png"), height = 8, width = 7) +ggsave(pRaincloud_interaction, filename = paste0(outdir, "variance_explained_raincloud_interaction.pdf"), height = 8, width = 7) + + + +icc_interaction_sig_list <- list() + +for (ensg in unique(icc_interaction_plus_dt$gene)){ + icc_interaction_sig_list[[ensg]] <- icc_interaction_plus_dt[gene == ensg][P < 0.05/(nrow(icc_interaction_plus_dt[gene == ensg])-1)] + icc_interaction_sig_list[[ensg]] <- rbind(icc_interaction_sig_list[[ensg]], icc_interaction_plus_dt[gene == ensg & grp == "Residual"]) +} + +icc_interaction_sig_dt <- do.call(rbind, icc_interaction_sig_list) + + + +group_size <- data.table(table(icc_interaction_sig_dt$grp)) +colnames(group_size) <- c("grp", "size") +group_size$grp_size <- paste0(group_size$grp, "\nN = ", group_size$size) + +icc_interaction_sig_dt <- group_size[icc_interaction_sig_dt, on = "grp"] +icc_interaction_sig_dt$grp_size <- factor(icc_interaction_sig_dt$grp_size, levels = c(unique(grep("^Line\nN = ", icc_interaction_sig_dt$grp_size, value = TRUE)), + unique(grep("^Village\nN = ", icc_interaction_sig_dt$grp_size, value = TRUE)), + unique(grep("^Site\nN = ", icc_interaction_sig_dt$grp_size, value = TRUE)), + unique(grep("^Cryopreserved\nN =", icc_interaction_sig_dt$grp_size, value = TRUE)), + unique(grep("^Replicate\nN =", icc_interaction_sig_dt$grp_size, value = TRUE)), + unique(grep("Line:Village\nN =", icc_interaction_sig_dt$grp_size, value = TRUE)), + unique(grep("Line:Site\nN =", icc_interaction_sig_dt$grp_size, value = TRUE)), + unique(grep("Line:Cryopreserved\nN =", icc_interaction_sig_dt$grp_size, value = TRUE)), + unique(grep("Village:Site\nN =", icc_interaction_sig_dt$grp_size, value = TRUE)), + unique(grep("Village:Cryopreserved\nN =", icc_interaction_sig_dt$grp_size, value = TRUE)), + unique(grep("Replicate:Village\nN ", icc_interaction_sig_dt$grp_size, value = TRUE)), + unique(grep("Replicate:Line\nN ", icc_interaction_sig_dt$grp_size, value = TRUE)), + unique(grep("Replicate:Site\nN ", icc_interaction_sig_dt$grp_size, value = TRUE)), + unique(grep("Replicate:Cryopreserved\nN ", icc_interaction_sig_dt$grp_size, value = TRUE)), + unique(grep("Residual\nN = ", icc_interaction_sig_dt$grp_size, value = TRUE)))) + + + + +pRaincloud_interaction_sig <- ggplot(icc_interaction_sig_dt, aes(x = percent, y = grp_size, fill = factor(grp, levels = rev(vars)))) + + geom_density_ridges(stat = "binline", bins = 100, scale = 0.7, draw_baseline = FALSE, aes(height =..ndensity..), alpha = 0.75) + + geom_boxplot(size = 0.5,width = .15, outlier.size = 0.25, position = position_nudge(y=-0.12), alpha = 0.75) + + coord_cartesian(xlim = c(1.2, NA), clip = "off") + + theme_classic() + + theme(axis.title.y=element_blank()) + + xlab("Percent Variance Explained") + + scale_y_discrete(expand = c(0.03, 0)) + + scale_fill_manual(values = var_colors) + + geom_vline(xintercept = 1, linetype = "dashed", color = "firebrick3") + +ggsave(pRaincloud_interaction_sig, filename = paste0(outdir, "variance_explained_raincloud_interaction_significant.png"), height = 8, width = 7) +ggsave(pRaincloud_interaction_sig, filename = paste0(outdir, "variance_explained_raincloud_interaction_significant.pdf"), height = 8, width = 7) + + +total <- icc_interaction_sig_dt[,.(count = .N), by = .(grp)] +total_less1pct <- icc_interaction_sig_dt[percent <= 1][,.(count_less_1pct = .N), by = .(grp)] +total_less5pct <- icc_interaction_sig_dt[percent <= 5][,.(count_less_5pct = .N), by = .(grp)] +total_less10pct <- icc_interaction_sig_dt[percent <= 10][,.(count_less_10pct = .N), by = .(grp)] +summary <- total[total_less1pct, on = "grp"] +summary <- summary[total_less5pct, on = "grp"] +summary <- summary[total_less10pct, on = "grp"] +summary$count_greater_1pct <- summary$count - summary$count_less_1pct +summary$count_greater_5pct <- summary$count - summary$count_less_5pct +summary$count_greater_10pct <- summary$count - summary$count_less_10pct +summary$percent_1pct <- (summary$count_less_1pct/summary$count)*100 +summary$percent_5pct <- (summary$count_less_5pct/summary$count)*100 +summary$percent_10pct <- (summary$count_less_10pct/summary$count)*100 + + +pRaincloud_interaction_sig_1pct <- ggplot(icc_interaction_sig_dt[percent >= 1], aes(x = percent, y = grp_size, fill = factor(grp, levels = rev(vars)))) + + geom_density_ridges(stat = "binline", bins = 90, scale = 0.7, draw_baseline = FALSE, aes(height =..ndensity..), alpha = 0.75) + + geom_boxplot(size = 0.5,width = .15, outlier.size = 0.25, position = position_nudge(y=-0.12), alpha = 0.75) + + coord_cartesian(xlim = c(1.2, NA), clip = "off") + + theme_classic() + + theme(axis.title.y=element_blank()) + + xlab("Percent Variance Explained") + + scale_y_discrete(expand = c(0.03, 0)) + + scale_fill_manual(values = var_colors) + + geom_vline(xintercept = 1, linetype = "dashed", color = "firebrick3") + +ggsave(pRaincloud_interaction_sig_1pct, filename = paste0(outdir, "variance_explained_raincloud_interaction_significant_1pct.png"), height = 8, width = 7) +ggsave(pRaincloud_interaction_sig_1pct, filename = paste0(outdir, "variance_explained_raincloud_interaction_significant_1pct.pdf"), height = 8, width = 7) + + + +icc_interaction_sig_dt[gene == "ENSG00000106153"] +icc_dt[gene == "ENSG00000106153"] + + + + + + + + +##### Add gene IDs for easy identification downstream ##### +GeneConversion1 <- read_delim("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/data/Expression_200128_A00152_0196_BH3HNFDSXY/GE/DRENEA_1/outs/filtered_feature_bc_matrix/features.tsv.gz", col_names = F, delim = "\t") +GeneConversion2 <- read_delim("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/data/Expression_200128_A00152_0196_BH3HNFDSXY/GE/Village_B_1_week/outs/filtered_feature_bc_matrix/features.tsv.gz", col_names = F, delim = "\t") + +GeneConversion <- unique(rbind(GeneConversion1, GeneConversion2)) +GeneConversion <- GeneConversion[!duplicated(GeneConversion$X1),] +GeneConversion$X3 <- NULL +colnames(GeneConversion) <- c("gene", "Gene_ID") + +GeneConversion <- data.table(GeneConversion) + + +### Add the gene IDs to the icc_dt ### + +icc_interaction_plus_dt <- GeneConversion[icc_interaction_plus_dt, on = "gene"] + +icc_interaction_plus_dt[grp == "Cryopreserved"][rev(order(percent))]$Gene_ID +icc_interaction_plus_dt[grp == "Line"][rev(order(percent))]$Gene_ID +icc_interaction_plus_dt[grp == "Village"][rev(order(percent))]$Gene_ID + +fwrite(icc_interaction_plus_dt, paste0(outdir, "sig_results.tsv.gz"), sep = "\t", compress = "gzip") + +## Highlight +## X chromosome genes - wouldn't expect these to be Line-biased because expressed by both males and females +## Y chromosome genes - should be line-biased because expressed by only males and have some male(s) and some female(s) +## mt genes +## ribosomal genes +## look at gsea and kegg pathways for each + +## Read in gtf used as reference and pull just X, Y or MT chromosome genes from it, use ribosomal file for rb genes +gtf <- fread("/directflow/GWCCGPipeline/projects/reference/refdata-cellranger-GRCh38-3.0.0/genes/genes.gtf", sep = "\t", autostart = 6, header = FALSE) + +gtf_genes <- gtf[!(grep("transcript_id", V9))] + +gtf_genes$V9 <- gsub("gene_id \"", "",gtf_genes$V9 ) %>% + gsub("\"; gene_version \"", ";", .) %>% + gsub("\"; gene_name \"", ";", .) %>% + gsub("\"; gene_source \"", ";", .) %>% + gsub("\"; gene_biotype \"", ";", .) %>% + gsub("\"", "", .) + +gtf_genes[, c("gene_id", "gene_version", "gene_name", "gene_source", "gene_biotype") := data.table(str_split_fixed(V9,";", 5))] + + +X_chromosome_genes <- gtf_genes[V1 == "X"] +X_genelist <- X_chromosome_genes$gene_id[X_chromosome_genes$gene_id %in% genes] +Y_chromosome_genes <- gtf_genes[V1 == "Y"] +Y_genelist <- Y_chromosome_genes$gene_id[Y_chromosome_genes$gene_id %in% genes] +MT_chromosome_genes <- gtf_genes[V1 == "MT"] +MT_genelist <- MT_chromosome_genes$gene_id[MT_chromosome_genes$gene_id %in% genes] +RbGeneList <- read.delim(file = "/directflow/SCCGGroupShare/projects/DrewNeavin/References/RibosomalGeneList_GeneID_ENSG.txt") +Rb_genelist <- RbGeneList$ENSG[RbGeneList$ENSG %in% genes] + + +### Make stacked bar plots of the variance explained by different factors for these gene groups + + + + +## Figure of x chromosome genes ## +icc_x <- icc_interaction_plus_dt[data.table(gene = icc_interaction_plus_dt[grp == "Residual"][gene %in% X_genelist][order(percent_round)]$gene), on = "gene"] +icc_x$grp <- factor(icc_x$grp, levels = rev(vars)) +icc_x$gene <- factor(icc_x$gene, levels = unique(icc_x$gene)) + +bar_proportions_x <- ggplot(icc_x, aes(x = gene, y = percent, fill = grp)) + + geom_bar(position="stack", stat="identity", alpha = 0.75) + + theme_classic() + + theme(axis.title.x=element_blank(), + axis.text.x=element_blank(), + axis.ticks.x=element_blank(), + plot.title = element_text(hjust = 0.5)) + + scale_fill_manual(values = var_colors) + + ggtitle("Variance Explained of\nX Chromosome Genes") + + +ggsave(bar_proportions_x, filename = paste0(outdir, "variance_explained_bar_x_genes.png"), width = 20) + + +## Figure of y chromosome genes ## +icc_y <- icc_interaction_plus_dt[data.table(gene = icc_interaction_plus_dt[grp == "Residual"][gene %in% Y_genelist][order(percent_round)]$gene), on = "gene"] +icc_y$grp <- factor(icc_y$grp, levels = rev(vars)) +icc_y$gene <- factor(icc_y$gene, levels = unique(icc_y$gene)) +icc_y$Gene_ID <- factor(icc_y$Gene_ID, levels = unique(icc_y$Gene_ID)) + + +bar_proportions_y <- ggplot(icc_y, aes(x = Gene_ID, y = percent, fill = grp)) + + geom_bar(position="stack", stat="identity", alpha = 0.75) + + theme_classic() + + theme(axis.title.x=element_blank(), + # axis.text.x=element_blank(), + # axis.ticks.x=element_blank(), + plot.title = element_text(hjust = 0.5), + axis.text.x = element_text(angle = 90, vjust = 0.5, hjust=1)) + + scale_fill_manual(values = var_colors) + + scale_y_continuous(expand = c(0, 0)) + + ggtitle("Variance Explained of\nY Chromosome Genes") + + ylab("Percent") + + +ggsave(bar_proportions_y, filename = paste0(outdir, "variance_explained_bar_y_genes.png"), width = 4.5, height = 4.5) +ggsave(bar_proportions_y, filename = paste0(outdir, "variance_explained_bar_y_genes.pdf"), width = 4.5, height = 4.5) + + + +## Figure of mt chromosome genes ## +icc_mt <- icc_interaction_plus_dt[data.table(gene = icc_interaction_plus_dt[grp == "Residual"][gene %in% MT_genelist][order(percent_round)]$gene), on = "gene"] +icc_mt$grp <- factor(icc_mt$grp, levels = rev(vars)) +icc_mt$gene <- factor(icc_mt$gene, levels = unique(icc_mt$gene)) +icc_mt$Gene_ID <- factor(icc_mt$Gene_ID, levels = unique(icc_mt$Gene_ID)) + + +bar_proportions_mt <- ggplot(icc_mt, aes(x = Gene_ID, y = percent, fill = grp)) + + geom_bar(position="stack", stat="identity", alpha = 0.75) + + theme_classic() + + theme(axis.title.x=element_blank(), + # axis.text.x=element_blank(), + # axis.ticks.x=element_blank(), + plot.title = element_text(hjust = 0.5), + axis.text.x = element_text(angle = 90, vjust = 0.5, hjust=1)) + + scale_fill_manual(values = var_colors) + + scale_y_continuous(expand = c(0, 0)) + + ggtitle("Variance Explained of\nMitochondrial Genes") + + ylab("Percent") + +ggsave(bar_proportions_mt, filename = paste0(outdir, "variance_explained_bar_mt_genes.png"), width = 4.5, height = 4.5) +ggsave(bar_proportions_mt, filename = paste0(outdir, "variance_explained_bar_mt_genes.pdf"), width = 4.5, height = 4.5) + + + +## Figure of mt chromosome genes ## +icc_rb <- icc_interaction_plus_dt[data.table(gene = icc_interaction_plus_dt[grp == "Residual"][gene %in% Rb_genelist][order(percent_round)]$gene), on = "gene"] +icc_rb$grp <- factor(icc_rb$grp, levels = rev(vars)) +icc_rb$gene <- factor(icc_rb$gene, levels = unique(icc_rb$gene)) + + +bar_proportions_rb <- ggplot(icc_rb, aes(x = gene, y = percent, fill = grp)) + + geom_bar(position="stack", stat="identity", alpha = 0.75) + + theme_classic() + + theme(axis.title.x=element_blank(), + axis.text.x=element_blank(), + axis.ticks.x=element_blank(), + plot.title = element_text(hjust = 0.5)) + + scale_fill_manual(values = var_colors) + + scale_y_continuous(expand = c(0, 0)) + + ggtitle("Variance Explained\nof Ribosomal Genes") + + +ggsave(bar_proportions_rb, filename = paste0(outdir, "variance_explained_bar_rb_genes.png"), width = 10, height = 4) +ggsave(bar_proportions_rb, filename = paste0(outdir, "variance_explained_bar_rb_genes.pdf"), width = 10, height = 4) + + +### Plot Pluripotency Genes ### +pluri_genes <- fread(paste0(dir,"data/pluripotency_genes.tsv"), sep = "\t", col.names = "Gene_ID", header = FALSE) + + +pluri_genes <- GeneConversion[pluri_genes, on = "Gene_ID"] + + +icc_dt_pluri_genes <- icc_interaction_plus_dt[pluri_genes,on = c("gene", "Gene_ID")] +icc_dt_pluri_genes$grp <- factor(icc_dt_pluri_genes$grp, levels = rev(vars)) +icc_dt_pluri_genes <- icc_dt_pluri_genes[data.table(gene = icc_dt_pluri_genes[grp == "Residual"][order(percent)]$gene), on = "gene"] +icc_dt_pluri_genes$Gene_ID <- factor(icc_dt_pluri_genes$Gene_ID, levels = unique(icc_dt_pluri_genes$Gene_ID)) + + + +pPluri_Genes_Cont <- ggplot() + + geom_bar(data = icc_dt_pluri_genes, aes(Gene_ID, percent, fill = grp), position = "stack", stat = "identity", alpha = 0.75) + + theme_classic() + + # facet_wrap(Gene_ID ~ ., nrow = 3) + + scale_fill_manual(values = var_colors) + + theme(plot.title = element_text(hjust = 0.5), + axis.text.x = element_text(angle = 90, vjust = 0.5, hjust=1)) + + ylab("Percent Gene Expression Variance Explained") + + ggtitle("Variance Explained of\nPluripotency Genes") + + theme(axis.title.x=element_blank()) + +ggsave(pPluri_Genes_Cont, filename = paste0(outdir, "Pluripotent_Gene_Variable_Contributions.png"), width = 6, height = 4.5) +ggsave(pPluri_Genes_Cont, filename = paste0(outdir, "Pluripotent_Gene_Variable_Contributions.pdf"), width = 6, height = 4.5) + + + +##### check for variance explained for eQTL genes (from Kilpinen et al) that are ##### +eqtls <- fread("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/gene_snp_list.tsv", sep = "\t") + + +eqtls_icc <- icc_interaction_plus_dt[unique(eqtls[,"gene"]), on = "gene"] +eqtls_icc$grp <- factor(eqtls_icc$grp, levels = rev(vars)) +eqtls_icc <- eqtls_icc[data.table(gene = eqtls_icc[grp == "Residual"][order(percent)]$gene), on = "gene"] +eqtls_icc$Gene_ID <- factor(eqtls_icc$Gene_ID, levels = unique(eqtls_icc$Gene_ID)) + + +group_size_eqtl <- data.table(table(eqtls_icc$grp)) +colnames(group_size_eqtl) <- c("grp", "size") +group_size_eqtl$grp_size <- paste0(group_size_eqtl$grp, "\nN = ", group_size_eqtl$size) + +eqtls_icc <- group_size_eqtl[eqtls_icc, on = "grp"] +eqtls_icc$grp_size <- factor(eqtls_icc$grp_size, levels = c(unique(grep("^Line\nN = ", eqtls_icc$grp_size, value = TRUE)), + unique(grep("^Village\nN = ", eqtls_icc$grp_size, value = TRUE)), + unique(grep("^Site\nN = ", eqtls_icc$grp_size, value = TRUE)), + unique(grep("^Cryopreserved\nN =", eqtls_icc$grp_size, value = TRUE)), + unique(grep("^Replicate\nN =", eqtls_icc$grp_size, value = TRUE)), + unique(grep("Line:Village\nN =", eqtls_icc$grp_size, value = TRUE)), + unique(grep("Line:Site\nN =", eqtls_icc$grp_size, value = TRUE)), + unique(grep("Line:Cryopreserved\nN =", eqtls_icc$grp_size, value = TRUE)), + unique(grep("Village:Site\nN =", eqtls_icc$grp_size, value = TRUE)), + unique(grep("Village:Cryopreserved\nN =", eqtls_icc$grp_size, value = TRUE)), + unique(grep("Replicate:Village\nN ", eqtls_icc$grp_size, value = TRUE)), + unique(grep("Replicate:Line\nN ", eqtls_icc$grp_size, value = TRUE)), + unique(grep("Replicate:Site\nN ", eqtls_icc$grp_size, value = TRUE)), + unique(grep("Replicate:Cryopreserved\nN ", eqtls_icc$grp_size, value = TRUE)), + unique(grep("Residual\nN = ", eqtls_icc$grp_size, value = TRUE)))) + + +eqtls_icc_1pct <- eqtls_icc + + +for (ensg in unique(eqtls_icc$gene)){ + if (!any(eqtls_icc[gene == ensg & grp != "Residual"]$percent > 1)){ + eqtls_icc_1pct <- eqtls_icc_1pct[gene != ensg] + } +} + + + +eqtls_icc_1pct_grouped_list <- list() + + +for (ensg in unique(eqtls_icc_1pct$gene)){ + group <- eqtls_icc_1pct[gene == ensg & grp != "Residual"][which.max(percent)]$grp + eqtls_icc_1pct_grouped_list[[group]][[ensg]] <- eqtls_icc_1pct[gene == ensg] +} + +eqtls_icc_1pct_grouped <- lapply(eqtls_icc_1pct_grouped_list, function(x) do.call(rbind, x)) +eqtls_icc_1pct_grouped <- lapply(names(eqtls_icc_1pct_grouped), function(x){ + eqtls_icc_1pct_grouped[[x]]$largest_contributor <- x + return(eqtls_icc_1pct_grouped[[x]]) +}) + +eqtls_icc_1pct_grouped_dt <- do.call(rbind, eqtls_icc_1pct_grouped) + +eqtls_icc_1pct_grouped_dt$largest_contributor <- factor(eqtls_icc_1pct_grouped_dt$largest_contributor, levels = vars) + + + +pPluri_Genes_largest_Cont_eqtl <- ggplot() + + geom_bar(data = eqtls_icc_1pct_grouped_dt, aes(Gene_ID, percent, fill = factor(grp, levels = rev(vars))), position = "stack", stat = "identity", alpha = 0.75) + + theme_classic() + + facet_grid(. ~ largest_contributor, scales = "free_x", space = "free_x") + + scale_fill_manual(values = var_colors) + + ylab("Percent Gene Expression Variance Explained") + + theme(axis.title.x=element_blank(), + axis.text.x = element_blank(), + panel.spacing.x=unit(0, "lines"), + axis.ticks.x = element_blank()) + + geom_hline(yintercept = 1, linetype = "dashed") + # scale_y_discrete(expand = c(0.03, 0)) + # scale_x_discrete(expand = c(0.03, 0)) + + +ggsave(pPluri_Genes_largest_Cont_eqtl, filename = paste0(outdir, "eQTL_Genes_Variance_Contributions_1pct_largest_cont.png"), width = 10, height = 4) +ggsave(pPluri_Genes_largest_Cont_eqtl, filename = paste0(outdir, "eQTL_Genes_Variance_Contributions_1pct_largest_cont.pdf"), width = 10, height = 4) + + + + + + + +# ### Count number of each chromosome/gene category type +# ### numbers are the numbers of that category that where a significant percent of variance is explained by this variable +# ### percent of that category that where a significant percent of variance is explained by this variable + +# x_number <- lapply(genes_list, function(x){ +# length(which(x %in% X_chromosome_genes$gene_id)) +# }) + +# x_percent <- lapply(genes_list, function(x){ +# length(which(x %in% X_chromosome_genes$gene_id))/length(X_chromosome_genes$gene_id) +# }) + +# y_number <- lapply(genes_list, function(x){ +# length(which(x %in% Y_chromosome_genes$gene_id)) +# }) + +# y_percent <- lapply(genes_list, function(x){ +# length(which(x %in% Y_chromosome_genes$gene_id))/length(Y_chromosome_genes$gene_id) +# }) + +# mt_number <- lapply(genes_list, function(x){ +# length(which(x %in% MT_chromosome_genes$gene_id)) +# }) + +# mt_percent <- lapply(genes_list, function(x){ +# length(which(x %in% MT_chromosome_genes$gene_id))/length(MT_chromosome_genes$gene_id) +# }) + +# rb_number <- lapply(genes_list, function(x){ +# length(which(x %in% RbGeneList$ENSG)) +# }) + +# rb_percent <- lapply(genes_list, function(x){ +# length(which(x %in% RbGeneList$ENSG))/length(RbGeneList$ENSG) +# }) + + + +# ### for > 1% var explained +# ### Count number of each chromosome/gene category type +# x_number_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% X_chromosome_genes$gene_id)) +# }) +# names(x_number_1) <- vars + +# x_percent_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% X_chromosome_genes$gene_id))/length(X_chromosome_genes$gene_id) +# }) +# names(x_percent_1) <- vars + +# y_number_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% Y_chromosome_genes$gene_id)) +# }) +# names(y_number_1) <- vars + +# y_percent_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% Y_chromosome_genes$gene_id))/length(Y_chromosome_genes$gene_id) +# }) +# names(y_percent_1) <- vars + +# mt_number_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% MT_chromosome_genes$gene_id)) +# }) +# names(mt_number_1) <- vars + +# mt_percent_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% MT_chromosome_genes$gene_id))/length( MT_chromosome_genes$gene_id) +# }) +# names(mt_percent_1) <- vars + +# rb_number_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% RbGeneList$ENSG)) +# }) +# names(rb_number_1) <- vars + +# rb_percent_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% RbGeneList$ENSG))/length(RbGeneList$ENSG) +# }) +# names(rb_percent_1) <- vars + + +### Pathway analysis ### +geneList <- lapply(genes_list, function(x){ + tmp <- bitr(x, fromType = "ENSEMBL", + toType = c("ENTREZID"), + OrgDb = org.Hs.eg.db)$ENTREZID + tmp[!is.na(tmp)] +}) + + +gg <- list() +kk <- list() + + + +df = as.data.frame(org.Hs.egGO) +go_gene_list = unique(sort(df$gene_id)) + +dfk = as.data.frame(org.Hs.egPATH) +kegg_gene_list = unique(sort(dfk$gene_id)) + + + +for (group in vars){ + kk[[group]] <- enrichKEGG(gene = geneList[[group]], + universe = geneList[[group]], + organism = 'hsa', + pvalueCutoff = 0.05, + keyType = 'ncbi-geneid') + + gg[[group]] <- groupGO(gene = geneList[[group]], + OrgDb = org.Hs.eg.db, + readable = TRUE) + +} + + +hsGO <- godata('org.Hs.eg.db', ont="MF") + + +sim_results <- list() + +vars <- c("Line", "Village", "Cryopreserved", "Replicate","Village:Line", "Line:Cryopreserved", "Village:Cryopreserved", "Replicate:Village", "Replicate:Line", "Replicate:Cryopreserved") + +for (group1 in vars){ + print(group1) + for (group2 in vars[(grep(paste0("^",group1, "$"), vars) + 1): length(vars)]){ + print(group2) + sim_results[[group1]][[group2]] <- clusterSim(geneList[[group1]], geneList[[group2]], semData=hsGO, measure="Wang", combine="BMA") + } +} + + + + + +# genes2rerun <- c(character()) + +# for (g in unique(icc_dt$gene)){ +# print(g) +# genes2rerun <- c(genes2rerun, as.character(unique(icc_dt[gene == g][P > 0.05/(nrow(icc_dt[gene == g])-1)]$gene))) +# } + + +# for (gene in genes2rerun){ +# print(gene) +# # unlink(paste0(icc_dir,gene,"_icc.rds")) +# print(file.exists(paste0(icc_dir,gene,"_icc.rds"))) +# unlink(paste0("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/",gene,"_fitted_models.rds")) +# unlink(paste0("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/residuals4qtl/",gene,"_residuals4qtl.rds")) +# } + + diff --git a/Variance/post_review_all_cells/variance_partition_post_review_snake_cryo.sh b/Variance/post_review_all_cells/variance_partition_post_review_snake_cryo.sh new file mode 100644 index 0000000..c46db13 --- /dev/null +++ b/Variance/post_review_all_cells/variance_partition_post_review_snake_cryo.sh @@ -0,0 +1,138 @@ + +SNAKEFILE="/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/scripts/Variance/post_review_all_cells/variance_partitioning_all_cells.smk" +LOG="/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/logs/" + +mkdir -p $LOG + + +conda activate wg1_snakemake + + +snakemake \ + --snakefile $SNAKEFILE \ + --dryrun \ + --cores 1 \ + --quiet \ + --unlock + + +snakemake \ + --snakefile $SNAKEFILE \ + --dryrun \ + --cores 1 \ + --reason > jobs2run.txt + + + +nohup \ + snakemake \ + --snakefile $SNAKEFILE \ + --jobs 200 \ + --use-singularity \ + --restart-times 1 \ + --keep-going \ + --cluster \ + "qsub -S /bin/bash \ + -q short.q \ + -r yes \ + -pe smp {threads} \ + -l tmp_requested={resources.disk_per_thread_gb}G \ + -l mem_requested={resources.mem_per_thread_gb}G \ + -e $LOG \ + -o $LOG \ + -j y \ + -V" \ + > $LOG/nohup_`date +%Y-%m-%d.%H:%M:%S`.log & + + +snakemake \ + --snakefile $SNAKEFILE \ + --dryrun \ + --cores 1 \ + --quiet \ + --unlock + + +snakemake \ + --snakefile $SNAKEFILE \ + --dryrun \ + --cores 1 \ + --quiet \ + --cleanup-metadata \ + /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000116001_icc.rds \ + /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000116001_fitted_models.rds \ + /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000084112_icc.rds \ + /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000084112_fitted_models.rds \ + /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000130706_icc.rds \ + /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000130706_fitted_models.rds + + + +rm ENSG00000047617_icc.rds +rm ENSG00000089250_icc.rds +rm ENSG00000124602_icc.rds +rm ENSG00000130052_icc.rds +rm ENSG00000136099_icc.rds +rm ENSG00000143412_icc.rds +rm ENSG00000147124_icc.rds +rm ENSG00000158104_icc.rds +rm ENSG00000160188_icc.rds +rm ENSG00000163393_icc.rds +rm ENSG00000163947_icc.rds +rm ENSG00000167083_icc.rds +rm ENSG00000170113_icc.rds +rm ENSG00000170961_icc.rds +rm ENSG00000172748_icc.rds +rm ENSG00000184916_icc.rds +rm ENSG00000185386_icc.rds +rm ENSG00000186141_icc.rds +rm ENSG00000188536_icc.rds +rm ENSG00000189164_icc.rds +rm ENSG00000230606_icc.rds +rm ENSG00000242687_icc.rds +rm ENSG00000243444_icc.rds +rm ENSG00000253438_icc.rds +rm ENSG00000253731_icc.rds +rm ENSG00000258813_icc.rds +rm ENSG00000258944_icc.rds +rm ENSG00000260528_icc.rds +rm ENSG00000272030_icc.rds +rm ENSG00000272973_icc.rds +rm ENSG00000274367_icc.rds +rm ENSG00000275580_icc.rds + + + + +rm ENSG00000047617_fitted_models.rds +rm ENSG00000089250_fitted_models.rds +rm ENSG00000124602_fitted_models.rds +rm ENSG00000130052_fitted_models.rds +rm ENSG00000136099_fitted_models.rds +rm ENSG00000143412_fitted_models.rds +rm ENSG00000147124_fitted_models.rds +rm ENSG00000158104_fitted_models.rds +rm ENSG00000160188_fitted_models.rds +rm ENSG00000163393_fitted_models.rds +rm ENSG00000163947_fitted_models.rds +rm ENSG00000167083_fitted_models.rds +rm ENSG00000170113_fitted_models.rds +rm ENSG00000170961_fitted_models.rds +rm ENSG00000172748_fitted_models.rds +rm ENSG00000184916_fitted_models.rds +rm ENSG00000185386_fitted_models.rds +rm ENSG00000186141_fitted_models.rds +rm ENSG00000188536_fitted_models.rds +rm ENSG00000189164_fitted_models.rds +rm ENSG00000230606_fitted_models.rds +rm ENSG00000242687_fitted_models.rds +rm ENSG00000243444_fitted_models.rds +rm ENSG00000253438_fitted_models.rds +rm ENSG00000253731_fitted_models.rds +rm ENSG00000258813_fitted_models.rds +rm ENSG00000258944_fitted_models.rds +rm ENSG00000260528_fitted_models.rds +rm ENSG00000272030_fitted_models.rds +rm ENSG00000272973_fitted_models.rds +rm ENSG00000274367_fitted_models.rds +rm ENSG00000275580_fitted_models.rds diff --git a/Variance/post_review_all_cells/variance_partitioning_all_cells.R b/Variance/post_review_all_cells/variance_partitioning_all_cells.R new file mode 100644 index 0000000..e386dff --- /dev/null +++ b/Variance/post_review_all_cells/variance_partitioning_all_cells.R @@ -0,0 +1,396 @@ +library(haven) +library(ggplot2) +library(glmmTMB) +library(Seurat) +library(tidyverse) +library(specr) +library(data.table) +library(dsLib) +library(pkgcond) +library(texreg) + + +inicio("Starting Analysis") + + +##### Define functions ##### +icc_glmmtmb <- function(model, percent = TRUE) { + tmp <- VarCorr(model) + var <- do.call(rbind, lapply(names(tmp$cond), function(x) data.table("grp" = x, "vcov" = attr(tmp$cond[[x]], "stddev")^2))) + var <- rbind(var, data.table("grp" = "Residual", "vcov" = sigma(model)^2)) + sum_var <- sum(var$vcov) + var <- var %>% dplyr::mutate(icc = vcov/sum_var) + if (isTRUE(percent)) { + var <- var %>% dplyr::mutate(percent = .data$icc * 100) + } + return(var) +} + + + +##### Bring in variables ##### +### Bring in arguments +args <- commandArgs(trailingOnly = TRUE) +icc_interaction_outdir <- paste0(args[1]) +icc_outdir <- paste0(args[2]) +model_interaction_outdir <- paste0(args[3]) +model_outdir <- paste0(args[4]) +resid_outdir <- paste0(args[5]) +gene <- as.character(args[6]) + +print(icc_outdir) +print(icc_outdir) +print(model_outdir) +print(resid_outdir) +print(gene) + + + + +##### Read in seurat with genes ##### +seurat <- readRDS("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds") + + +seurat@meta.data$Location <- gsub("_Baseline", "", seurat@meta.data$Location) %>% gsub("_Village.+", "", .) %>% gsub("Thawed", "Cryopreserved",.) +seurat@meta.data$Time <- gsub("Thawed Village Day 0", "Baseline", seurat@meta.data$Time) %>% gsub("Thawed Village Day 7", "Village", .) %>% gsub(" Day 4", "", .) +seurat@meta.data$Cryopreserved <-ifelse(seurat@meta.data$Location == "Sydney_Cryopreserved", "Cryopreserved", "Fresh") +seurat@meta.data$Location <- gsub("_Cryopreserved", "", seurat@meta.data$Location) + + + +### Make DF for modeling ### +df_hier_unscale <- data.frame("Expression" = seurat[["SCT"]]@scale.data[gene,], "Village" = as.factor(ifelse(seurat@meta.data$Time == "Baseline", 0, 1)), "Line" = seurat@meta.data$Final_Assignment, "Replicate" = as.factor(gsub("[A-Z][a-z]+", "", seurat@meta.data$MULTI_ID)), "Cryopreserved" = seurat$Cryopreserved, "Site" = seurat$Location) +colnames(df_hier_unscale)[1] <- "Expression" + + + + +##### Leave one out method ##### +variables <- c("Line", "Village", "Site", "Cryopreserved", "Replicate") + +model_all <- as.formula(paste0("Expression ~ (1|", paste0(variables, collapse = ") + (1|"), ")")) + + +boolFalse<-F +while(boolFalse==F & length(variables) > 0){ + tryCatch({ + print(variables) + model_glmmtmb <- suppress_warnings(glmmTMB(formula = noquote(model_all), data = df_hier_unscale, REML = TRUE), "giveCsparse") + boolFalse<-T + },error=function(e){ + if (length(variables) > 1){ + variables <- variables[1:(length(variables) -1)] + } else { + variables <- c() + } + }) +} + + +if (!length(variables) == 0){ + + + ### Deal with singular fits by removing last variable until a fit can be found - ordered in variables buy importance + while (!model_glmmtmb$sdr$pdHess & length(variables) > 0 ){ + print("Singular fit: removing last variable and rerunning with one less covariate.") + if (length(variables) > 1){ + variables <- variables[1:(length(variables) -1)] + print(variables) + model_all <- as.formula(paste0("Expression ~ (1|", paste0(variables, collapse = ") + (1|"), ")")) + model_glmmtmb <- suppress_warnings(glmmTMB(formula = noquote(model_all), data = df_hier_unscale, REML = TRUE), "giveCsparse") + } else { + variables <- c() + } + } + + print(variables) + + if (length(variables) > 0){ + + model_loo <- list() + + icc <- data.table(grp = variables, P = as.numeric(NA)) + + for (variable in variables){ + print(variable) + if (length(variables) > 1){ + model <- as.formula(paste0("Expression ~ (1|", paste0(variables[!variables %in% variable], collapse = ") + (1|"), ")")) + } else { + model <- as.formula(paste0("Expression ~ 1")) + } + model_loo[[variable]] <- suppress_warnings(glmmTMB(formula = noquote(model), data = df_hier_unscale, REML = TRUE), "giveCsparse") + icc[grp == variable]$P <- anova(model_loo[[variable]], model_glmmtmb)$`Pr(>Chisq)`[2] + } + + + if (!(any(icc[grp != "Residual"]$P > 0.05/length(variables)) | any(is.na(icc[grp != "Residual"]$P)))){ + model_loo_updated <- model_loo + + updated_model <- as.formula(paste0("Expression ~ 1 + (1|", paste0(variables, collapse = ") + (1|"), ")")) + + model_loo_updated[["all"]] <- suppress_warnings(glmmTMB(formula = noquote(updated_model), data = df_hier_unscale, REML = TRUE), "giveCsparse") + + ### Calculate the variance explained by each of the included variables ### + icc <- icc_glmmtmb(model_loo_updated[["all"]]) + + + ### Recalculate significance ### + icc$P <- as.numeric(NA) + icc$gene <- gene + + for (variable in variables){ + print(variable) + if (length(variables) > 1){ + model <- as.formula(paste0("Expression ~ 1 + (1|", paste0(variables[!variables %in% variable], collapse = ") + (1|"), ")")) + } else { + model <- as.formula(paste0("Expression ~ 1")) + } + model_loo_updated[[variable]] <- suppress_warnings(glmmTMB(formula = noquote(model), data = df_hier_unscale, REML = TRUE), "giveCsparse") + icc[grp == variable]$P <- anova(model_loo_updated[[variable]], model_loo_updated[["all"]])$`Pr(>Chisq)`[2] + } + } + + + while((any(icc[grp != "Residual"]$P > 0.05/length(variables)) | any(is.na(icc[grp != "Residual"]$P)))){ + + print("Removing non-significant vartiables and retesting signficance") + + ##### Identify variables to keep ##### + variables <- icc[P < 0.05/length(variables)]$grp + + if (length(variables) > 0){ + + ##### Calculate full model ##### + updated_model <- as.formula(paste0("Expression ~ 1 + (1|", paste0(variables, collapse = ") + (1|"), ")")) + + + model_loo_updated <- list() + model_loo_updated[["all"]] <- suppress_warnings(glmmTMB(formula = noquote(updated_model), data = df_hier_unscale, REML = TRUE), "giveCsparse") + + + + ### Calculate the variance explained by each of the included variables ### + icc <- icc_glmmtmb(model_loo_updated[["all"]]) + + + + ### Recalfulate significance ### + icc$P <- as.numeric(NA) + icc$gene <- gene + + for (variable in variables){ + print(variable) + if (length(variables) > 1){ + model <- as.formula(paste0("Expression ~ 1 + (1|", paste0(variables[!variables %in% variable], collapse = ") + (1|"), ")")) + } else { + model <- as.formula(paste0("Expression ~ 1")) + } + model_loo_updated[[variable]] <- suppress_warnings(glmmTMB(formula = noquote(model), data = df_hier_unscale, REML = TRUE), "giveCsparse") + icc[grp == variable]$P <- anova(model_loo_updated[[variable]], model_loo_updated[["all"]])$`Pr(>Chisq)`[2] + } + + + + } else { + icc <- data.table(grp=character(), vcov=numeric(), icc=numeric(), percent=numeric(), P=numeric(), gene=character()) + model_loo_updated <- list() + } + } + + interaction_variables <- c() + + if (length(variables) > 1 & length(variables[!c(variables %in% c("Site", "Cryopreserved"))])){ + ### Add in interactions of the significant variables + if ("Line" %in% variables & "Village" %in% variables){ + interaction_variables <- c(interaction_variables, "Line:Village") + } + if ("Line" %in% variables & "Cryopreserved" %in% variables){ + interaction_variables <- c(interaction_variables, "Line:Cryopreserved") + } + if ("Village" %in% variables & "Cryopreserved" %in% variables){ + interaction_variables <- c(interaction_variables, "Village:Cryopreserved") + } + if ("Line" %in% variables & "Site" %in% variables){ + interaction_variables <- c(interaction_variables, "Line:Site") + } + if ("Village" %in% variables & "Site" %in% variables){ + interaction_variables <- c(interaction_variables, "Village:Site") + } + if ("Replicate" %in% variables & "Village" %in% variables){ + interaction_variables <- c(interaction_variables, "Replicate:Village") + } + if ("Replicate" %in% variables & "Line" %in% variables){ + interaction_variables <- c(interaction_variables, "Replicate:Line") + } + if ("Replicate" %in% variables & "Site" %in% variables){ + interaction_variables <- c(interaction_variables, "Replicate:Site") + } + if ("Replicate" %in% variables & "Cryopreserved" %in% variables){ + interaction_variables <- c(interaction_variables, "Replicate:Cryopreserved") + } + + + + + model_all_interaction <- as.formula(paste0("Expression ~ (1|", paste0(c(variables, interaction_variables), collapse = ") + (1|"), ")")) + + + boolFalse<-F + while(boolFalse==F & length(interaction_variables) > 0){ + tryCatch({ + print(c(variables, interaction_variables)) + model_glmmtmb_interaction <- suppress_warnings(glmmTMB(formula = noquote(model_all_interaction), data = df_hier_unscale, REML = TRUE), "giveCsparse") + boolFalse<-T + },error=function(e){ + if (length(interaction_variables) > 1){ + interaction_variables <- interaction_variables[1:(length(interaction_variables) -1)] + } else { + interaction_variables <- c() + } + }) + } + + ### Deal with singular fits by removing last variable until a fit can be found - ordered in variables buy importance + while (!model_glmmtmb_interaction$sdr$pdHess & length(interaction_variables) > 0 ){ + print("Singular fit: removing last variable and rerunning with one less covariate.") + if (length(interaction_variables) > 1){ + interaction_variables <- interaction_variables[1:(length(interaction_variables) -1)] + print(c(interaction_variables, variables)) + model_all_interaction <- as.formula(paste0("Expression ~ (1|", paste0(c(variables, interaction_variables), collapse = ") + (1|"), ")")) + model_glmmtmb_interaction <- suppress_warnings(glmmTMB(formula = noquote(model_all_interaction), data = df_hier_unscale, REML = TRUE), "giveCsparse") + } else { + interaction_variables <- c() + } + } + + if (length(interaction_variables) > 0){ + + model_loo_interaction <- list() + + icc_interaction <- data.table(grp = interaction_variables, P = as.numeric(NA)) + + for (variable in c(interaction_variables)){ + print(variable) + if (length(interaction_variables) > 1){ + model_interaction <- as.formula(paste0("Expression ~ (1|", paste0(c(variables, interaction_variables)[!c(variables, interaction_variables) %in% variable], collapse = ") + (1|"), ")")) + } else { + model_interaction <- as.formula(paste0("Expression ~ (1|", paste0(variables[!variables %in% variable], collapse = ") + (1|"), ")")) + } + model_loo_interaction[[variable]] <- suppress_warnings(glmmTMB(formula = noquote(model_interaction), data = df_hier_unscale, REML = TRUE), "giveCsparse") + icc_interaction[grp == variable]$P <- anova(model_loo_interaction[[variable]], model_glmmtmb_interaction)$`Pr(>Chisq)`[2] + } + + + if (!(any(icc_interaction[grp != "Residual"]$P > 0.05/length(c(variables, interaction_variables))) | any(is.na(icc_interaction[grp != "Residual"]$P)))){ + model_loo_interaction_updated <- model_loo_interaction + + updated_model_interaction <- as.formula(paste0("Expression ~ 1 + (1|", paste0(c(variables, interaction_variables), collapse = ") + (1|"), ")")) + + model_loo_interaction_updated[["all"]] <- suppress_warnings(glmmTMB(formula = noquote(updated_model_interaction), data = df_hier_unscale, REML = TRUE), "giveCsparse") + + ### Calculate the variance explained by each of the included variables ### + icc_interaction <- icc_glmmtmb(model_loo_interaction_updated[["all"]]) + + + ### Recalculate significance ### + icc_interaction$P <- as.numeric(NA) + icc_interaction$gene <- gene + + for (variable in c(variables, interaction_variables)){ + print(variable) + if (length(c(interaction_variables)) > 1){ + model <- as.formula(paste0("Expression ~ 1 + (1|", paste0(c(variables, interaction_variables)[!c(variables, interaction_variables) %in% variable], collapse = ") + (1|"), ")")) + } else { + model <- as.formula(paste0("Expression ~ (1|", paste0(variables[!variables %in% variable], collapse = ") + (1|"), ")")) + } + model_loo_interaction_updated[[variable]] <- suppress_warnings(glmmTMB(formula = noquote(model), data = df_hier_unscale, REML = TRUE), "giveCsparse") + icc_interaction[grp == variable]$P <- anova(model_loo_interaction_updated[[variable]], model_loo_interaction_updated[["all"]])$`Pr(>Chisq)`[2] + } + } + + + while((any(icc_interaction[!(grp %in% c("Residual", variables))]$P > 0.05/length(c(variables, interaction_variables))) | any(is.na(icc_interaction[!(grp %in%c("Residual", variables))]$P)))){ + + print("Removing non-significant vartiables and retesting signficance") + + ##### Identify variables to keep ##### + interaction_variables <- icc_interaction[!(grp %in% c("Residual", variables)) & P < 0.05/length(c(variables, interaction_variables))]$grp + + if (length(interaction_variables) > 0){ + + ##### Calculate full model ##### + updated_model_interaction <- as.formula(paste0("Expression ~ 1 + (1|", paste0(c(variables, interaction_variables), collapse = ") + (1|"), ")")) + + + model_loo_interaction_updated <- list() + model_loo_interaction_updated[["all"]] <- suppress_warnings(glmmTMB(formula = noquote(updated_model_interaction), data = df_hier_unscale, REML = TRUE), "giveCsparse") + + + + ### Calculate the variance explained by each of the included variables ### + icc_interaction <- icc_glmmtmb(model_loo_interaction_updated[["all"]]) + + + + ### Recalfulate significance ### + icc_interaction$P <- as.numeric(NA) + icc_interaction$gene <- gene + + for (variable in c(variables, interaction_variables)){ + print(variable) + model_interaction <- as.formula(paste0("Expression ~ 1 + (1|", paste0(c(variables, interaction_variables)[!(c(variables, interaction_variables) %in% variable)], collapse = ") + (1|"), ")")) + + model_loo_interaction_updated[[variable]] <- suppress_warnings(glmmTMB(formula = noquote(model_interaction), data = df_hier_unscale, REML = TRUE), "giveCsparse") + icc_interaction[grp == variable]$P <- anova(model_loo_interaction_updated[[variable]], model_loo_interaction_updated[["all"]])$`Pr(>Chisq)`[2] + } + } else { + icc_interaction <- data.table(grp=character(), vcov=numeric(), icc=numeric(), percent=numeric(), P=numeric(), gene=character()) + model_loo_interaction_updated <- list() + } + + if (nrow(icc_interaction) > nrow(icc)){ + saveRDS(icc_interaction, paste0(icc_interaction_outdir, gene, "_icc.rds"), compress = TRUE) + saveRDS(model_loo_interaction_updated, paste0(model_interaction_outdir, gene, "_fitted_models.rds"), compress = TRUE) + } + } + } else { + icc_interaction <- data.table(grp=character(), vcov=numeric(), icc=numeric(), percent=numeric(), P=numeric(), gene=character()) + model_loo_interaction_updated <- list() + } + + + ### If line is significant, then get residuals for downstream qtl checks ### + if ("Line" %in% variables){ + print("Making residuals for qtl detection") + if (length(variables) > 1){ + if (length(interaction_variables) > 0){ + model_no_line <- as.formula(paste0("Expression ~ (1|", paste0(c(variables, interaction_variables)[-grep("Line", c(variables, interaction_variables))], collapse = ") + (1|"), ")")) + } else { + model_no_line <- as.formula(paste0("Expression ~ (1|", paste0(variables[!variables %in% "Line"], collapse = ") + (1|"), ")")) + } + } else { + model_no_line <- as.formula(paste0("Expression ~ 1")) + } + fit_no_line <- glmmTMB(formula = noquote(model_no_line), data = df_hier_unscale, REML = TRUE) + residuals <- resid(fit_no_line) + saveRDS(residuals, paste0(resid_outdir, gene, "_residuals4qtl.rds"), compress = TRUE) + } + + } else { + icc <- data.table(grp=character(), vcov=numeric(), icc=numeric(), percent=numeric(), P=numeric(), gene=character()) + model_loo_updated <- list() + } + } else { + icc <- data.table(grp=character(), vcov=numeric(), icc=numeric(), percent=numeric(), P=numeric(), gene=character()) + model_loo_updated <- list() + } +} + + +saveRDS(icc, paste0(icc_outdir, gene, "_icc.rds"), compress = TRUE) +saveRDS(model_loo_updated, paste0(model_outdir, gene, "_fitted_models.rds"), compress = TRUE) + + + + +fin() \ No newline at end of file diff --git a/Variance/post_review_all_cells/variance_partitioning_all_cells.smk b/Variance/post_review_all_cells/variance_partitioning_all_cells.smk new file mode 100644 index 0000000..860004d --- /dev/null +++ b/Variance/post_review_all_cells/variance_partitioning_all_cells.smk @@ -0,0 +1,40 @@ +import pandas as pd + + +genes_file = "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/seurat_integrated_Sydney_1pct_expressing_genes.tsv" +genes = pd.read_csv(genes_file, sep = "\t") +# genes = genes.iloc[0] + + +rule all: + input: + expand("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/{gene}_fitted_models.rds", gene = genes.Gene) + + +rule partition_variance: + input: + seurat = "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds" + output: + "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/{gene}_icc.rds", + "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/{gene}_fitted_models.rds" + resources: + mem_per_thread_gb = lambda wildcards, attempt: attempt * 16, + disk_per_thread_gb = lambda wildcards, attempt: attempt * 16 + threads: 4 + params: + script = "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/scripts/Variance/post_review_all_cells/variance_partitioning_all_cells.R", + out_icc="/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc/", + out_model="/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/fit_models/", + out_resids="/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/residuals4qtl/", + out_icc_interaction = "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc_interaction/", + out_model_interaction = "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partitioning_all_cells/gene_separated/icc_interaction/" + log: + shell: + """ + mkdir -p {params.out_icc_interaction} + mkdir -p {params.out_model_interaction} + mkdir -p {params.out_resids} + + /directflow/SCCGGroupShare/projects/DrewNeavin/software/anaconda3/envs/baseR402/bin/Rscript {params.script} {params.out_icc_interaction} {params.out_icc} {params.out_model_interaction} {params.out_model} {params.out_resids} {wildcards.gene} + """ + \ No newline at end of file diff --git a/Variance/post_review_cryo/prepare_data.R b/Variance/post_review_cryo/prepare_data.R new file mode 100644 index 0000000..eaa3223 --- /dev/null +++ b/Variance/post_review_cryo/prepare_data.R @@ -0,0 +1,23 @@ +library(Seurat) +liberary(tidyverse) +library(dplyr) +library(data.table) + + +##### Read in seurat with genes ##### +seurat <- readRDS("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds") + +seurat@meta.data$Location <- gsub("_Baseline", "", seurat@meta.data$Location) %>% gsub("_Village.+", "", .) %>% gsub("Thawed", "Cryopreserved",.) +seurat@meta.data$Time <- gsub("Thawed Village Day 0", "Baseline", seurat@meta.data$Time) %>% gsub("Thawed Village Day 7", "Village", .) %>% gsub(" Day 4", "", .) +seurat@meta.data$Cryopreserved <-ifelse(seurat@meta.data$Location == "Sydney_Cryopreserved", "Cryopreserved", "Fresh") +seurat@meta.data$Location <- gsub("_Cryopreserved", "", seurat@meta.data$Location) + + +seurat <- subset(seurat, subset = Location == "Sydney") +seurat <- subset(seurat, features = rownames(seurat)[which(rowSums(seurat[["SCT"]]@counts > 0)/ncol(seurat[["SCT"]]@counts) >= 0.01)]) + +seurat <- SCTransform(seurat, verbose = TRUE, vars.to.regress = c("scores.G1", "scores.S", "scores.G2M", "percent.mt", "percent.rb"), return.only.var.genes = FALSE) + +saveRDS(seurat, "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo/seurat_integrated_Sydney_1pct_expressing.rds") + +fwrite(data.table(Gene = rownames(seurat)), "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo/seurat_integrated_Sydney_1pct_expressing_genes.tsv", sep = "\t") diff --git a/Variance/post_review_cryo/variance_partition_post_review_combine_cryo.R b/Variance/post_review_cryo/variance_partition_post_review_combine_cryo.R new file mode 100644 index 0000000..f7c6bc1 --- /dev/null +++ b/Variance/post_review_cryo/variance_partition_post_review_combine_cryo.R @@ -0,0 +1,462 @@ +##### Reason: combine the results for the variance explained by different factors for each gene +##### Author: Drew Neavin +##### Date: 14 March, 2022 + + +##### Load in libraries ##### +library(data.table) +library(tidyverse) +library(ggridges) +library(raincloudplots) +library(ggdist) +library(clusterProfiler) +library(org.Hs.eg.db) +library(GOSemSim) + + + +##### Set up directories ##### +dir <- "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/" +icc_dir <- "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo/gene_separated/icc/" +outdir <- "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo/combined/" + +dir.create(outdir, recursive = TRUE) + + +vars <- c("Line", "Village", "Cryopreserved", "Replicate","Village:Line", "Line:Cryopreserved", "Village:Cryopreserved", "Replicate:Village", "Replicate:Line", "Replicate:Cryopreserved", "Residual") +var_colors <- c("#9e0142", "#d53e4f", "#f46d43", "#fdae61", "#fee08b", "#e6f598", "#abdda4", "#66c2a5", "#3288bd", "#5e4fa2", "gray90") +names(var_colors) <- vars + + +##### Get list of icc files ##### +icc_files <- list.files(icc_dir) + + + +##### Read in icc results ##### +icc_results_list <- lapply(icc_files, function(x){ + readRDS(paste0(icc_dir,x)) +}) +names(icc_results_list) <- icc_files + + + +##### Merge icc results into a single data.table ##### +icc_dt <- do.call(rbind, icc_results_list) + +icc_dt$percent_round <- round(icc_dt$percent) + +icc_dt$grp <- factor(icc_dt$grp, levels= rev(c("Line", "Village", "Cryopreserved", "Replicate","Village:Line", "Line:Cryopreserved", "Village:Cryopreserved", "Replicate:Village", "Replicate:Line", "Replicate:Cryopreserved", "Residual"))) + +group_size <- data.table(table(icc_dt$grp)) +colnames(group_size) <- c("grp", "size") +group_size$grp_size <- paste0(group_size$grp, "\nN = ", group_size$size) + +icc_dt <- group_size[icc_dt, on = "grp"] +icc_dt$grp_size <- factor(icc_dt$grp_size, levels = unique(group_size$grp_size)) + + + +##### Make a figure of stacked variance explained ##### +### Order based on line variance explained ### +genes_list <- list() + +for (group in c("Line", "Village", "Cryopreserved", "Replicate","Village:Line", "Line:Cryopreserved", "Village:Cryopreserved", "Replicate:Village", "Replicate:Line", "Replicate:Cryopreserved", "Residual")){ + genes_list[[group]] <- icc_dt[grp == group][rev(order(percent_round))]$gene +} + +genes <- unique(unlist(genes_list)) + +icc_dt$gene <- factor(icc_dt$gene, levels = genes) + +icc_dt$grp <- factor(icc_dt$grp, levels= rev(c("Line", "Village", "Cryopreserved", "Replicate","Village:Line", "Line:Cryopreserved", "Village:Cryopreserved", "Replicate:Village", "Replicate:Line", "Replicate:Cryopreserved", "Residual"))) + + +## First on line percent, then village percent ## +bar_proportions <- ggplot(icc_dt, aes(x = gene, y = percent, fill = grp)) + + geom_bar(position="stack", stat="identity") + + theme_classic() + + theme(axis.title.x=element_blank(), + axis.text.x=element_blank(), + axis.ticks.x=element_blank()) + +ggsave(bar_proportions, filename = paste0(outdir, "variance_explained_bar.png"), width = 20) + + + +### Try boxplot ### +boxplot <- ggplot(icc_dt, aes(x = factor(grp, levels = rev(levels(grp))), y = percent, fill = factor(grp, levels = rev(levels(grp))), color = factor(grp, levels = rev(levels(grp))))) + + geom_boxplot(alpha = 0.5, size = 0.5) + + theme_classic() + + xlab("Covariate") + + theme(axis.text.x = element_text(angle = 90, vjust = 0.5, hjust=1), + legend.position="none") + +ggsave(boxplot, filename = paste0(outdir, "variance_explained_box.png"), height = 4, width = 5) + + +### Try ridgplots ### +pRidges <- ggplot(icc_dt[grp != "Residual"], aes(x = percent, y = factor(grp, levels = rev(levels(grp))), fill = factor(grp, levels = rev(levels(grp))))) + + geom_density_ridges(stat = "binline", bins = 200, scale = 0.95, draw_baseline = FALSE) + + # geom_density_ridges() + + theme_classic() + +ggsave(pRidges, filename = paste0(outdir, "variance_explained_ridge.png"), height = 8, width = 10) + +### Try ridgplots ### +pRidges_pop <- ggplot(icc_dt[grp != "Residual"][percent > 10], aes(x = percent, y = factor(grp, levels = rev(levels(grp))), fill = factor(grp, levels = rev(levels(grp))))) + + geom_density_ridges(stat = "binline", bins = 180, scale = 0.95, draw_baseline = FALSE) + + # geom_density_ridges() + + theme_classic() + +ggsave(pRidges_pop, filename = paste0(outdir, "variance_explained_ridge_pop.png"), height = 8, width = 10) + + +pRaincloud <- ggplot(icc_dt, aes(x = percent, y = factor(grp_size, levels = rev(levels(grp_size))), fill = factor(grp, levels = rev(vars)))) + + geom_density_ridges(stat = "binline", bins = 90, scale = 0.7, draw_baseline = FALSE, aes(height =..ndensity..), alpha = 0.75) + + geom_boxplot(size = 0.5,width = .15, outlier.size = 0.25, position = position_nudge(y=-0.12), alpha = 0.75) + + coord_cartesian(xlim = c(1.2, NA), clip = "off") + + theme_classic() + + theme(axis.title.y=element_blank()) + + xlab("Percent Variance Explained") + + scale_y_discrete(expand = c(0.03, 0)) + + scale_fill_manual(values = var_colors) + +ggsave(pRaincloud, filename = paste0(outdir, "variance_explained_raincloud.png"), height = 8, width = 7) +ggsave(pRaincloud, filename = paste0(outdir, "variance_explained_raincloud.pdf"), height = 8, width = 7) + + + +##### Add gene IDs for easy identification downstream ##### +GeneConversion1 <- read_delim("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/data/Expression_200128_A00152_0196_BH3HNFDSXY/GE/DRENEA_1/outs/filtered_feature_bc_matrix/features.tsv.gz", col_names = F, delim = "\t") +GeneConversion2 <- read_delim("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/data/Expression_200128_A00152_0196_BH3HNFDSXY/GE/Village_B_1_week/outs/filtered_feature_bc_matrix/features.tsv.gz", col_names = F, delim = "\t") + +GeneConversion <- unique(rbind(GeneConversion1, GeneConversion2)) +GeneConversion <- GeneConversion[!duplicated(GeneConversion$X1),] +GeneConversion$X3 <- NULL +colnames(GeneConversion) <- c("gene", "Gene_ID") + +GeneConversion <- data.table(GeneConversion) + + +### Add the gene IDs to the icc_dt ### + +icc_dt <- GeneConversion[icc_dt, on = "gene"] + +icc_dt[grp == "Cryopreserved"][rev(order(percent))]$Gene_ID +icc_dt[grp == "Line"][rev(order(percent))]$Gene_ID +icc_dt[grp == "Village"][rev(order(percent))]$Gene_ID + +## Highlight +## X chromosome genes - wouldn't expect these to be Line-biased because expressed by both males and females +## Y chromosome genes - should be line-biased because expressed by only males and have some male(s) and some female(s) +## mt genes +## ribosomal genes +## look at gsea and kegg pathways for each + +## Read in gtf used as reference and pull just X, Y or MT chromosome genes from it, use ribosomal file for rb genes +gtf <- fread("/directflow/GWCCGPipeline/projects/reference/refdata-cellranger-GRCh38-3.0.0/genes/genes.gtf", sep = "\t", autostart = 6, header = FALSE) + +gtf_genes <- gtf[!(grep("transcript_id", V9))] + +gtf_genes$V9 <- gsub("gene_id \"", "",gtf_genes$V9 ) %>% + gsub("\"; gene_version \"", ";", .) %>% + gsub("\"; gene_name \"", ";", .) %>% + gsub("\"; gene_source \"", ";", .) %>% + gsub("\"; gene_biotype \"", ";", .) %>% + gsub("\"", "", .) + +gtf_genes[, c("gene_id", "gene_version", "gene_name", "gene_source", "gene_biotype") := data.table(str_split_fixed(V9,";", 5))] + + +X_chromosome_genes <- gtf_genes[V1 == "X"] +X_genelist <- X_chromosome_genes$gene_id[X_chromosome_genes$gene_id %in% genes] +Y_chromosome_genes <- gtf_genes[V1 == "Y"] +Y_genelist <- Y_chromosome_genes$gene_id[Y_chromosome_genes$gene_id %in% genes] +MT_chromosome_genes <- gtf_genes[V1 == "MT"] +MT_genelist <- MT_chromosome_genes$gene_id[MT_chromosome_genes$gene_id %in% genes] +RbGeneList <- read.delim(file = "/directflow/SCCGGroupShare/projects/DrewNeavin/References/RibosomalGeneList_GeneID_ENSG.txt") +Rb_genelist <- RbGeneList$ENSG[RbGeneList$ENSG %in% genes] + + +### Make stacked bar plots of the variance explained by different factors for these gene groups + + + + +## Figure of x chromosome genes ## +icc_x <- icc_dt[data.table(gene = icc_dt[grp == "Residual"][gene %in% X_genelist][order(percent_round)]$gene), on = "gene"] +icc_x$grp <- factor(icc_x$grp, levels = rev(vars)) +icc_x$gene <- factor(icc_x$gene, levels = unique(icc_x$gene)) + +bar_proportions_x <- ggplot(icc_x, aes(x = gene, y = percent, fill = grp)) + + geom_bar(position="stack", stat="identity", alpha = 0.75) + + theme_classic() + + theme(axis.title.x=element_blank(), + axis.text.x=element_blank(), + axis.ticks.x=element_blank(), + plot.title = element_text(hjust = 0.5)) + + scale_fill_manual(values = var_colors) + + ggtitle("Variance Explained of\nX Chromosome Genes") + + +ggsave(bar_proportions_x, filename = paste0(outdir, "variance_explained_bar_x_genes.png"), width = 20) + + +## Figure of y chromosome genes ## +icc_y <- icc_dt[data.table(gene = icc_dt[grp == "Residual"][gene %in% Y_genelist][order(percent_round)]$gene), on = "gene"] +icc_y$grp <- factor(icc_y$grp, levels = rev(vars)) +icc_y$gene <- factor(icc_y$gene, levels = unique(icc_y$gene)) + + +bar_proportions_y <- ggplot(icc_y, aes(x = gene, y = percent, fill = grp)) + + geom_bar(position="stack", stat="identity", alpha = 0.75) + + theme_classic() + + theme(axis.title.x=element_blank(), + axis.text.x=element_blank(), + axis.ticks.x=element_blank(), + plot.title = element_text(hjust = 0.5)) + + scale_fill_manual(values = var_colors) + + scale_y_continuous(expand = c(0, 0)) + + ggtitle("Variance Explained of\nY Chromosome Genes") + + +ggsave(bar_proportions_y, filename = paste0(outdir, "variance_explained_bar_y_genes.png"), width = 5) +ggsave(bar_proportions_y, filename = paste0(outdir, "variance_explained_bar_y_genes.pdf"), width = 5) + + + +## Figure of mt chromosome genes ## +icc_mt <- icc_dt[data.table(gene = icc_dt[grp == "Residual"][gene %in% MT_genelist][order(percent_round)]$gene), on = "gene"] +icc_mt$grp <- factor(icc_mt$grp, levels = rev(vars)) +icc_mt$gene <- factor(icc_mt$gene, levels = unique(icc_mt$gene)) + + +bar_proportions_mt <- ggplot(icc_mt, aes(x = gene, y = percent, fill = grp)) + + geom_bar(position="stack", stat="identity", alpha = 0.75) + + theme_classic() + + theme(axis.title.x=element_blank(), + axis.text.x=element_blank(), + axis.ticks.x=element_blank(), + plot.title = element_text(hjust = 0.5)) + + scale_fill_manual(values = var_colors) + + scale_y_continuous(expand = c(0, 0)) + + ggtitle("Variance Explained of\nMitochondrial Genes") + +ggsave(bar_proportions_mt, filename = paste0(outdir, "variance_explained_bar_mt_genes.png"), width = 4.5) +ggsave(bar_proportions_mt, filename = paste0(outdir, "variance_explained_bar_mt_genes.pdf"), width = 4.5) + + + +## Figure of mt chromosome genes ## +icc_rb <- icc_dt[data.table(gene = icc_dt[grp == "Residual"][gene %in% Rb_genelist][order(percent_round)]$gene), on = "gene"] +icc_rb$grp <- factor(icc_rb$grp, levels = rev(vars)) +icc_rb$gene <- factor(icc_rb$gene, levels = unique(icc_rb$gene)) + + +bar_proportions_rb <- ggplot(icc_rb, aes(x = gene, y = percent, fill = grp)) + + geom_bar(position="stack", stat="identity", alpha = 0.75) + + theme_classic() + + theme(axis.title.x=element_blank(), + axis.text.x=element_blank(), + axis.ticks.x=element_blank(), + plot.title = element_text(hjust = 0.5)) + + scale_fill_manual(values = var_colors) + + scale_y_continuous(expand = c(0, 0)) + + ggtitle("Variance Explained\nof Ribosomal Genes") + +ggsave(bar_proportions_rb, filename = paste0(outdir, "variance_explained_bar_rb_genes.png"), width = 10) + + + +### Plot Pluripotency Genes ### +pluri_genes <- fread(paste0(dir,"data/pluripotency_genes.tsv"), sep = "\t", col.names = "Gene_ID") + + +pluri_genes <- GeneConversion[pluri_genes, on = "Gene_ID"] + + +icc_dt_pluri_genes <- icc_dt[pluri_genes,on = c("gene", "Gene_ID")] +icc_dt_pluri_genes$grp <- factor(icc_dt_pluri_genes$grp, levels = rev(vars)) +icc_dt_pluri_genes <- icc_dt_pluri_genes[data.table(gene = icc_dt_pluri_genes[grp == "Residual"][order(percent)]$gene), on = "gene"] +icc_dt_pluri_genes$Gene_ID <- factor(icc_dt_pluri_genes$Gene_ID, levels = unique(icc_dt_pluri_genes$Gene_ID)) + + + +pPluri_Genes_Cont <- ggplot() + + geom_bar(data = icc_dt_pluri_genes, aes(Gene_ID, percent, fill = grp), position = "stack", stat = "identity", alpha = 0.75) + + theme_classic() + + # facet_wrap(Gene_ID ~ ., nrow = 3) + + scale_fill_manual(values = var_colors) + + theme(axis.text.x = element_text(size = 12, angle = 45, hjust = 1)) + + ylab("Percent Gene Expression Variance Explained") + + theme(axis.title.x=element_blank(), + legend.position="bottom") + +ggsave(pPluri_Genes_Cont, filename = paste0(outdir, "Pluripotent_Gene_Variable_Contributions.png"), width = 20, height = 12) + + + + + +# ### Count number of each chromosome/gene category type +# ### numbers are the numbers of that category that where a significant percent of variance is explained by this variable +# ### percent of that category that where a significant percent of variance is explained by this variable + +# x_number <- lapply(genes_list, function(x){ +# length(which(x %in% X_chromosome_genes$gene_id)) +# }) + +# x_percent <- lapply(genes_list, function(x){ +# length(which(x %in% X_chromosome_genes$gene_id))/length(X_chromosome_genes$gene_id) +# }) + +# y_number <- lapply(genes_list, function(x){ +# length(which(x %in% Y_chromosome_genes$gene_id)) +# }) + +# y_percent <- lapply(genes_list, function(x){ +# length(which(x %in% Y_chromosome_genes$gene_id))/length(Y_chromosome_genes$gene_id) +# }) + +# mt_number <- lapply(genes_list, function(x){ +# length(which(x %in% MT_chromosome_genes$gene_id)) +# }) + +# mt_percent <- lapply(genes_list, function(x){ +# length(which(x %in% MT_chromosome_genes$gene_id))/length(MT_chromosome_genes$gene_id) +# }) + +# rb_number <- lapply(genes_list, function(x){ +# length(which(x %in% RbGeneList$ENSG)) +# }) + +# rb_percent <- lapply(genes_list, function(x){ +# length(which(x %in% RbGeneList$ENSG))/length(RbGeneList$ENSG) +# }) + + + +# ### for > 1% var explained +# ### Count number of each chromosome/gene category type +# x_number_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% X_chromosome_genes$gene_id)) +# }) +# names(x_number_1) <- vars + +# x_percent_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% X_chromosome_genes$gene_id))/length(X_chromosome_genes$gene_id) +# }) +# names(x_percent_1) <- vars + +# y_number_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% Y_chromosome_genes$gene_id)) +# }) +# names(y_number_1) <- vars + +# y_percent_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% Y_chromosome_genes$gene_id))/length(Y_chromosome_genes$gene_id) +# }) +# names(y_percent_1) <- vars + +# mt_number_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% MT_chromosome_genes$gene_id)) +# }) +# names(mt_number_1) <- vars + +# mt_percent_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% MT_chromosome_genes$gene_id))/length( MT_chromosome_genes$gene_id) +# }) +# names(mt_percent_1) <- vars + +# rb_number_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% RbGeneList$ENSG)) +# }) +# names(rb_number_1) <- vars + +# rb_percent_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% RbGeneList$ENSG))/length(RbGeneList$ENSG) +# }) +# names(rb_percent_1) <- vars + + +### Pathway analysis ### +geneList <- lapply(genes_list, function(x){ + tmp <- bitr(x, fromType = "ENSEMBL", + toType = c("ENTREZID"), + OrgDb = org.Hs.eg.db)$ENTREZID + tmp[!is.na(tmp)] +}) + + +gg <- list() +kk <- list() + + + +df = as.data.frame(org.Hs.egGO) +go_gene_list = unique(sort(df$gene_id)) + +dfk = as.data.frame(org.Hs.egPATH) +kegg_gene_list = unique(sort(dfk$gene_id)) + + + +for (group in c("Line", "Village", "Cryopreserved", "Replicate","Village:Line", "Line:Cryopreserved", "Village:Cryopreserved", "Replicate:Village", "Replicate:Line", "Replicate:Cryopreserved", "Residual")){ + kk[[group]] <- enrichKEGG(gene = geneList[[group]], + universe = geneList[[group]], + organism = 'hsa', + pvalueCutoff = 0.05, + keyType = 'ncbi-geneid') + + gg[[group]] <- groupGO(gene = geneList[[group]], + OrgDb = org.Hs.eg.db, + readable = TRUE) + +} + + +hsGO <- godata('org.Hs.eg.db', ont="MF") + + +sim_results <- list() + +vars <- c("Line", "Village", "Cryopreserved", "Replicate","Village:Line", "Line:Cryopreserved", "Village:Cryopreserved", "Replicate:Village", "Replicate:Line", "Replicate:Cryopreserved") + +for (group1 in vars){ + print(group1) + for (group2 in vars[(grep(paste0("^",group1, "$"), vars) + 1): length(vars)]){ + print(group2) + sim_results[[group1]][[group2]] <- clusterSim(geneList[[group1]], geneList[[group2]], semData=hsGO, measure="Wang", combine="BMA") + } +} + + + + + +# genes2rerun <- c(character()) + +# for (g in unique(icc_dt$gene)){ +# print(g) +# genes2rerun <- c(genes2rerun, as.character(unique(icc_dt[gene == g][P > 0.05/(nrow(icc_dt[gene == g])-1)]$gene))) +# } + + +# for (gene in genes2rerun){ +# print(gene) +# # unlink(paste0(icc_dir,gene,"_icc.rds")) +# print(file.exists(paste0(icc_dir,gene,"_icc.rds"))) +# unlink(paste0("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/",gene,"_fitted_models.rds")) +# unlink(paste0("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/residuals4qtl/",gene,"_residuals4qtl.rds")) +# } + + diff --git a/Variance/post_review_cryo/variance_partition_post_review_cryo.R b/Variance/post_review_cryo/variance_partition_post_review_cryo.R new file mode 100644 index 0000000..549b51c --- /dev/null +++ b/Variance/post_review_cryo/variance_partition_post_review_cryo.R @@ -0,0 +1,217 @@ +library(haven) +library(ggplot2) +library(glmmTMB) +library(Seurat) +library(tidyverse) +library(specr) +library(data.table) +library(dsLib) +library(pkgcond) +library(texreg) + + +inicio("Starting Analysis") + + +##### Define functions ##### +icc_glmmtmb <- function(model, percent = TRUE) { + tmp <- VarCorr(model) + var <- do.call(rbind, lapply(names(tmp$cond), function(x) data.table("grp" = x, "vcov" = attr(tmp$cond[[x]], "stddev")^2))) + var <- rbind(var, data.table("grp" = "Residual", "vcov" = sigma(model)^2)) + sum_var <- sum(var$vcov) + var <- var %>% dplyr::mutate(icc = vcov/sum_var) + if (isTRUE(percent)) { + var <- var %>% dplyr::mutate(percent = .data$icc * 100) + } + return(var) +} + + + +##### Bring in variables ##### +### Bring in arguments +args <- commandArgs(trailingOnly = TRUE) +icc_outdir <- paste0(args[1]) +model_outdir <- paste0(args[2]) +resid_outdir <- paste0(args[3]) +gene <- as.character(args[4]) + +print(icc_outdir) +print(model_outdir) +print(resid_outdir) +print(gene) + + + +##### Read in seurat with genes ##### +seurat <- readRDS("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo/seurat_integrated_Sydney_1pct_expressing.rds") + + + +### Make DF for modeling ### +df_hier_unscale <- data.frame("Expression" = seurat[["SCT"]]@scale.data[gene,], "Village" = as.factor(ifelse(seurat@meta.data$Time == "Baseline", 0, 1)), "Line" = seurat@meta.data$Final_Assignment, "Replicate" = as.factor(gsub("[A-Z][a-z]+", "", seurat@meta.data$MULTI_ID)), "Cryopreserved" = seurat$Cryopreserved) +colnames(df_hier_unscale)[1] <- "Expression" + + + +##### Leave one out method ##### +variables <- c("Line", "Village", "Cryopreserved", "Replicate","Village:Line", "Line:Cryopreserved", "Village:Cryopreserved", "Replicate:Village", "Replicate:Line", "Replicate:Cryopreserved") + +model_all <- as.formula(paste0("Expression ~ (1|", paste0(variables, collapse = ") + (1|"), ")")) + + +boolFalse<-F +while(boolFalse==F & length(variables) > 0){ + tryCatch({ + print(variables) + model_glmmtmb <- suppress_warnings(glmmTMB(formula = noquote(model_all), data = df_hier_unscale, REML = TRUE), "giveCsparse") + boolFalse<-T + },error=function(e){ + },finally={ + if (length(variables) > 1){ + variables <- variables[1:(length(variables) -1)] + } else { + variables <- c() + } + }) +} + + +if (!length(variables) == 0){ + + +### Deal with singular fits by removing last variable until a fit can be found - ordered in variables buy importance +while (!model_glmmtmb$sdr$pdHess & length(variables) > 0 ){ + print("Singular fit: removing last variable and rerunning with one less covariate.") + if (length(variables) > 1){ + variables <- variables[1:(length(variables) -1)] + print(variables) + model_all <- as.formula(paste0("Expression ~ (1|", paste0(variables, collapse = ") + (1|"), ")")) + model_glmmtmb <- suppress_warnings(glmmTMB(formula = noquote(model_all), data = df_hier_unscale, REML = TRUE), "giveCsparse") + } else { + variables <- c() + } +} + +print(variables) + +if (length(variables) > 0){ + + model_loo <- list() + + icc <- data.table(grp = variables, P = as.numeric(NA)) + + for (variable in variables){ + print(variable) + if (length(variables) > 1){ + model <- as.formula(paste0("Expression ~ (1|", paste0(variables[!variables %in% variable], collapse = ") + (1|"), ")")) + } else { + model <- as.formula(paste0("Expression ~ 1")) + } + model_loo[[variable]] <- suppress_warnings(glmmTMB(formula = noquote(model), data = df_hier_unscale, REML = TRUE), "giveCsparse") + icc[grp == variable]$P <- anova(model_loo[[variable]], model_glmmtmb)$`Pr(>Chisq)`[2] + } + + + if (!(any(icc[grp != "Residual"]$P > 0.05/length(variables)) | any(is.na(icc[grp != "Residual"]$P)))){ + model_loo_updated <- model_loo + + updated_model <- as.formula(paste0("Expression ~ 1 + (1|", paste0(variables, collapse = ") + (1|"), ")")) + + model_loo_updated[["all"]] <- suppress_warnings(glmmTMB(formula = noquote(updated_model), data = df_hier_unscale, REML = TRUE), "giveCsparse") + + ### Calculate the variance explained by each of the included variables ### + icc <- icc_glmmtmb(model_loo_updated[["all"]]) + + + ### Recalfulate significance ### + icc$P <- as.numeric(NA) + icc$gene <- gene + + for (variable in variables){ + print(variable) + if (length(variables) > 1){ + model <- as.formula(paste0("Expression ~ 1 + (1|", paste0(variables[!variables %in% variable], collapse = ") + (1|"), ")")) + } else { + model <- as.formula(paste0("Expression ~ 1")) + } + model_loo_updated[[variable]] <- suppress_warnings(glmmTMB(formula = noquote(model), data = df_hier_unscale, REML = TRUE), "giveCsparse") + icc[grp == variable]$P <- anova(model_loo_updated[[variable]], model_loo_updated[["all"]])$`Pr(>Chisq)`[2] + } + } + + + while((any(icc[grp != "Residual"]$P > 0.05/length(variables)) | any(is.na(icc[grp != "Residual"]$P)))){ + + print("Removing non-significant vartiables and retesting signficance") + + ##### Identify variables to keep ##### + variables <- icc[P < 0.05/length(variables)]$grp + + if (length(variables) > 0){ + + ##### Calculate full model ##### + updated_model <- as.formula(paste0("Expression ~ 1 + (1|", paste0(variables, collapse = ") + (1|"), ")")) + + + model_loo_updated <- list() + model_loo_updated[["all"]] <- suppress_warnings(glmmTMB(formula = noquote(updated_model), data = df_hier_unscale, REML = TRUE), "giveCsparse") + + + + ### Calculate the variance explained by each of the included variables ### + icc <- icc_glmmtmb(model_loo_updated[["all"]]) + + + + ### Recalfulate significance ### + icc$P <- as.numeric(NA) + icc$gene <- gene + + for (variable in variables){ + print(variable) + if (length(variables) > 1){ + model <- as.formula(paste0("Expression ~ 1 + (1|", paste0(variables[!variables %in% variable], collapse = ") + (1|"), ")")) + } else { + model <- as.formula(paste0("Expression ~ 1")) + } + model_loo_updated[[variable]] <- suppress_warnings(glmmTMB(formula = noquote(model), data = df_hier_unscale, REML = TRUE), "giveCsparse") + icc[grp == variable]$P <- anova(model_loo_updated[[variable]], model_loo_updated[["all"]])$`Pr(>Chisq)`[2] + } + + + + } else { + icc <- data.table(grp=character(), vcov=numeric(), icc=numeric(), percent=numeric(), P=numeric(), gene=character()) + model_loo_updated <- list() + } + } + + + ### If line is significant, then get residuals for downstream qtl checks ### + if ("Line" %in% variables){ + print("Making residuals for qtl detection") + if (length(variables) > 1){ + model_no_line <- as.formula(paste0("Expression ~ (1|", paste0(variables[!variables %in% "Line"], collapse = ") + (1|"), ")")) + } else { + model_no_line <- as.formula(paste0("Expression ~ 1")) + } + fit_no_line <- glmmTMB(formula = noquote(model_no_line), data = df_hier_unscale, REML = TRUE) + residuals <- resid(fit_no_line) + saveRDS(residuals, paste0(resid_outdir, gene, "_residuals4qtl.rds"), compress = TRUE) + } + } else { + icc <- data.table(grp=character(), vcov=numeric(), icc=numeric(), percent=numeric(), P=numeric(), gene=character()) + model_loo_updated <- list() + } +} else { + icc <- data.table(grp=character(), vcov=numeric(), icc=numeric(), percent=numeric(), P=numeric(), gene=character()) + model_loo_updated <- list() +} + + +saveRDS(icc, paste0(icc_outdir, gene, "_icc.rds"), compress = TRUE) +saveRDS(model_loo_updated, paste0(model_outdir, gene, "_fitted_models.rds"), compress = TRUE) + + +fin() \ No newline at end of file diff --git a/Variance/post_review_cryo/variance_partition_post_review_cryo.smk b/Variance/post_review_cryo/variance_partition_post_review_cryo.smk new file mode 100644 index 0000000..5e74eab --- /dev/null +++ b/Variance/post_review_cryo/variance_partition_post_review_cryo.smk @@ -0,0 +1,33 @@ +import pandas as pd + + +genes_file = "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo/seurat_integrated_Sydney_1pct_expressing_genes.tsv" +genes = pd.read_csv(genes_file, sep = "\t") + + +rule all: + input: + expand("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo/gene_separated/fit_models/{gene}_fitted_models.rds", gene = genes.Gene) + + +rule partition_variance: + input: + seurat = "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds" + output: + "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo/gene_separated/icc/{gene}_icc.rds", + "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo/gene_separated/fit_models/{gene}_fitted_models.rds" + resources: + mem_per_thread_gb = lambda wildcards, attempt: attempt * 16, + disk_per_thread_gb = lambda wildcards, attempt: attempt * 16 + threads: 4 + params: + script = "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/scripts/Variance/post_review_cryo/variance_partition_post_review_cryo.R", + out_icc="/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo/gene_separated/icc/", + out_model="/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo/gene_separated/fit_models/", + out_resids="/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo/gene_separated/residuals4qtl/" + log: + shell: + """ + /directflow/SCCGGroupShare/projects/DrewNeavin/software/anaconda3/envs/baseR402/bin/Rscript {params.script} {params.out_icc} {params.out_model} {params.out_resids} {wildcards.gene} + """ + \ No newline at end of file diff --git a/Variance/post_review_cryo/variance_partition_post_review_snake_cryo.sh b/Variance/post_review_cryo/variance_partition_post_review_snake_cryo.sh new file mode 100644 index 0000000..59ff5af --- /dev/null +++ b/Variance/post_review_cryo/variance_partition_post_review_snake_cryo.sh @@ -0,0 +1,133 @@ + +SNAKEFILE="/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/scripts/Variance/post_review_cryo/variance_partition_post_review_cryo.smk" +LOG="/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo/gene_separated/logs/" + +mkdir -p $LOG + +snakemake \ + --snakefile $SNAKEFILE \ + --dryrun \ + --cores 1 \ + --quiet + + +snakemake \ + --snakefile $SNAKEFILE \ + --dryrun \ + --cores 1 \ + --reason > jobs2run.txt + + + +nohup \ + snakemake \ + --snakefile $SNAKEFILE \ + --jobs 100 \ + --use-singularity \ + --restart-times 1 \ + --keep-going \ + --cluster \ + "qsub -S /bin/bash \ + -q short.q \ + -r yes \ + -pe smp {threads} \ + -l tmp_requested={resources.disk_per_thread_gb}G \ + -l mem_requested={resources.mem_per_thread_gb}G \ + -e $LOG \ + -o $LOG \ + -j y \ + -V" \ + > $LOG/nohup_`date +%Y-%m-%d.%H:%M:%S`.log & + + +snakemake \ + --snakefile $SNAKEFILE \ + --dryrun \ + --cores 1 \ + --quiet \ + --unlock + + +snakemake \ + --snakefile $SNAKEFILE \ + --dryrun \ + --cores 1 \ + --quiet \ + --cleanup-metadata \ + /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000116001_icc.rds \ + /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000116001_fitted_models.rds \ + /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000084112_icc.rds \ + /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000084112_fitted_models.rds \ + /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000130706_icc.rds \ + /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000130706_fitted_models.rds + + + +rm ENSG00000047617_icc.rds +rm ENSG00000089250_icc.rds +rm ENSG00000124602_icc.rds +rm ENSG00000130052_icc.rds +rm ENSG00000136099_icc.rds +rm ENSG00000143412_icc.rds +rm ENSG00000147124_icc.rds +rm ENSG00000158104_icc.rds +rm ENSG00000160188_icc.rds +rm ENSG00000163393_icc.rds +rm ENSG00000163947_icc.rds +rm ENSG00000167083_icc.rds +rm ENSG00000170113_icc.rds +rm ENSG00000170961_icc.rds +rm ENSG00000172748_icc.rds +rm ENSG00000184916_icc.rds +rm ENSG00000185386_icc.rds +rm ENSG00000186141_icc.rds +rm ENSG00000188536_icc.rds +rm ENSG00000189164_icc.rds +rm ENSG00000230606_icc.rds +rm ENSG00000242687_icc.rds +rm ENSG00000243444_icc.rds +rm ENSG00000253438_icc.rds +rm ENSG00000253731_icc.rds +rm ENSG00000258813_icc.rds +rm ENSG00000258944_icc.rds +rm ENSG00000260528_icc.rds +rm ENSG00000272030_icc.rds +rm ENSG00000272973_icc.rds +rm ENSG00000274367_icc.rds +rm ENSG00000275580_icc.rds + + + + +rm ENSG00000047617_fitted_models.rds +rm ENSG00000089250_fitted_models.rds +rm ENSG00000124602_fitted_models.rds +rm ENSG00000130052_fitted_models.rds +rm ENSG00000136099_fitted_models.rds +rm ENSG00000143412_fitted_models.rds +rm ENSG00000147124_fitted_models.rds +rm ENSG00000158104_fitted_models.rds +rm ENSG00000160188_fitted_models.rds +rm ENSG00000163393_fitted_models.rds +rm ENSG00000163947_fitted_models.rds +rm ENSG00000167083_fitted_models.rds +rm ENSG00000170113_fitted_models.rds +rm ENSG00000170961_fitted_models.rds +rm ENSG00000172748_fitted_models.rds +rm ENSG00000184916_fitted_models.rds +rm ENSG00000185386_fitted_models.rds +rm ENSG00000186141_fitted_models.rds +rm ENSG00000188536_fitted_models.rds +rm ENSG00000189164_fitted_models.rds +rm ENSG00000230606_fitted_models.rds +rm ENSG00000242687_fitted_models.rds +rm ENSG00000243444_fitted_models.rds +rm ENSG00000253438_fitted_models.rds +rm ENSG00000253731_fitted_models.rds +rm ENSG00000258813_fitted_models.rds +rm ENSG00000258944_fitted_models.rds +rm ENSG00000260528_fitted_models.rds +rm ENSG00000272030_fitted_models.rds +rm ENSG00000272973_fitted_models.rds +rm ENSG00000274367_fitted_models.rds +rm ENSG00000275580_fitted_models.rds diff --git a/Variance/post_review_cryo2/jobs2run.txt b/Variance/post_review_cryo2/jobs2run.txt new file mode 100644 index 0000000..8630e07 --- /dev/null +++ b/Variance/post_review_cryo2/jobs2run.txt @@ -0,0 +1,29369 @@ +Building DAG of jobs... +Job counts: + count jobs + 1 all + 2935 partition_variance + 2936 + +[Sun Apr 17 18:22:33 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100445_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100445_fitted_models.rds + jobid: 10325 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100445_fitted_models.rds + wildcards: gene=ENSG00000100445 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:33 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000153201_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153201_fitted_models.rds + jobid: 1996 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153201_fitted_models.rds + wildcards: gene=ENSG00000153201 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:33 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000105894_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105894_fitted_models.rds + jobid: 5958 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105894_fitted_models.rds + wildcards: gene=ENSG00000105894 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:33 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000189091_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000189091_fitted_models.rds + jobid: 11791 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000189091_fitted_models.rds + wildcards: gene=ENSG00000189091 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:33 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000162552_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162552_fitted_models.rds + jobid: 227 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162552_fitted_models.rds + wildcards: gene=ENSG00000162552 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:33 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000188690_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188690_fitted_models.rds + jobid: 9150 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188690_fitted_models.rds + wildcards: gene=ENSG00000188690 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:33 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164897_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164897_fitted_models.rds + jobid: 6041 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164897_fitted_models.rds + wildcards: gene=ENSG00000164897 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:33 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000178947_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000178947_fitted_models.rds + jobid: 6522 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000178947_fitted_models.rds + wildcards: gene=ENSG00000178947 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:33 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164975_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164975_fitted_models.rds + jobid: 7207 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164975_fitted_models.rds + wildcards: gene=ENSG00000164975 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:33 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000088356_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000088356_fitted_models.rds + jobid: 13212 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000088356_fitted_models.rds + wildcards: gene=ENSG00000088356 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:33 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000160972_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160972_fitted_models.rds + jobid: 7154 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160972_fitted_models.rds + wildcards: gene=ENSG00000160972 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:33 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000166595_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166595_fitted_models.rds + jobid: 11713 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166595_fitted_models.rds + wildcards: gene=ENSG00000166595 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:33 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000185627_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185627_fitted_models.rds + jobid: 7766 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185627_fitted_models.rds + wildcards: gene=ENSG00000185627 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:33 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000183978_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183978_fitted_models.rds + jobid: 12395 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183978_fitted_models.rds + wildcards: gene=ENSG00000183978 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:33 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000112576_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112576_fitted_models.rds + jobid: 4932 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112576_fitted_models.rds + wildcards: gene=ENSG00000112576 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:33 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000111371_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111371_fitted_models.rds + jobid: 9412 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111371_fitted_models.rds + wildcards: gene=ENSG00000111371 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:33 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000111786_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111786_fitted_models.rds + jobid: 9872 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111786_fitted_models.rds + wildcards: gene=ENSG00000111786 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:33 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000127054_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000127054_fitted_models.rds + jobid: 24 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000127054_fitted_models.rds + wildcards: gene=ENSG00000127054 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:33 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000112697_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112697_fitted_models.rds + jobid: 5049 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112697_fitted_models.rds + wildcards: gene=ENSG00000112697 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000182378_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182378_fitted_models.rds + jobid: 6076 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182378_fitted_models.rds + wildcards: gene=ENSG00000182378 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167881_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167881_fitted_models.rds + jobid: 12712 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167881_fitted_models.rds + wildcards: gene=ENSG00000167881 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000137876_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137876_fitted_models.rds + jobid: 10909 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137876_fitted_models.rds + wildcards: gene=ENSG00000137876 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000137642_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137642_fitted_models.rds + jobid: 8545 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137642_fitted_models.rds + wildcards: gene=ENSG00000137642 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100823_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100823_fitted_models.rds + jobid: 10246 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100823_fitted_models.rds + wildcards: gene=ENSG00000100823 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000136810_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136810_fitted_models.rds + jobid: 7492 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136810_fitted_models.rds + wildcards: gene=ENSG00000136810 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000117906_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117906_fitted_models.rds + jobid: 11079 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117906_fitted_models.rds + wildcards: gene=ENSG00000117906 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000131711_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131711_fitted_models.rds + jobid: 4087 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131711_fitted_models.rds + wildcards: gene=ENSG00000131711 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000175279_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175279_fitted_models.rds + jobid: 123 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175279_fitted_models.rds + wildcards: gene=ENSG00000175279 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198586_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198586_fitted_models.rds + jobid: 2177 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198586_fitted_models.rds + wildcards: gene=ENSG00000198586 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000092964_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000092964_fitted_models.rds + jobid: 6723 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000092964_fitted_models.rds + wildcards: gene=ENSG00000092964 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000180921_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000180921_fitted_models.rds + jobid: 7121 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000180921_fitted_models.rds + wildcards: gene=ENSG00000180921 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164414_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164414_fitted_models.rds + jobid: 5085 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164414_fitted_models.rds + wildcards: gene=ENSG00000164414 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000101384_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101384_fitted_models.rds + jobid: 13150 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101384_fitted_models.rds + wildcards: gene=ENSG00000101384 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000116857_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116857_fitted_models.rds + jobid: 1243 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116857_fitted_models.rds + wildcards: gene=ENSG00000116857 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000245532_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000245532_fitted_models.rds + jobid: 8188 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000245532_fitted_models.rds + wildcards: gene=ENSG00000245532 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000107745_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107745_fitted_models.rds + jobid: 8851 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107745_fitted_models.rds + wildcards: gene=ENSG00000107745 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000277147_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000277147_fitted_models.rds + jobid: 894 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000277147_fitted_models.rds + wildcards: gene=ENSG00000277147 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000122705_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000122705_fitted_models.rds + jobid: 7300 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000122705_fitted_models.rds + wildcards: gene=ENSG00000122705 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000149257_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000149257_fitted_models.rds + jobid: 8344 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000149257_fitted_models.rds + wildcards: gene=ENSG00000149257 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000105171_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105171_fitted_models.rds + jobid: 13996 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105171_fitted_models.rds + wildcards: gene=ENSG00000105171 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000084072_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000084072_fitted_models.rds + jobid: 435 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000084072_fitted_models.rds + wildcards: gene=ENSG00000084072 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000160284_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160284_fitted_models.rds + jobid: 15161 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160284_fitted_models.rds + wildcards: gene=ENSG00000160284 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000125691_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125691_fitted_models.rds + jobid: 12315 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125691_fitted_models.rds + wildcards: gene=ENSG00000125691 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100504_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100504_fitted_models.rds + jobid: 10399 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100504_fitted_models.rds + wildcards: gene=ENSG00000100504 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000173457_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173457_fitted_models.rds + jobid: 8145 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173457_fitted_models.rds + wildcards: gene=ENSG00000173457 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000106605_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106605_fitted_models.rds + jobid: 5545 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106605_fitted_models.rds + wildcards: gene=ENSG00000106605 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000057608_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000057608_fitted_models.rds + jobid: 8622 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000057608_fitted_models.rds + wildcards: gene=ENSG00000057608 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000156564_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000156564_fitted_models.rds + jobid: 4919 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000156564_fitted_models.rds + wildcards: gene=ENSG00000156564 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000120963_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000120963_fitted_models.rds + jobid: 6986 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000120963_fitted_models.rds + wildcards: gene=ENSG00000120963 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000205213_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000205213_fitted_models.rds + jobid: 7944 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000205213_fitted_models.rds + wildcards: gene=ENSG00000205213 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000132688_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132688_fitted_models.rds + jobid: 1059 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132688_fitted_models.rds + wildcards: gene=ENSG00000132688 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000229891_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000229891_fitted_models.rds + jobid: 14928 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000229891_fitted_models.rds + wildcards: gene=ENSG00000229891 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000145337_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145337_fitted_models.rds + jobid: 3633 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145337_fitted_models.rds + wildcards: gene=ENSG00000145337 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000152942_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000152942_fitted_models.rds + jobid: 4075 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000152942_fitted_models.rds + wildcards: gene=ENSG00000152942 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000121578_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000121578_fitted_models.rds + jobid: 2980 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000121578_fitted_models.rds + wildcards: gene=ENSG00000121578 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000231389_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000231389_fitted_models.rds + jobid: 4840 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000231389_fitted_models.rds + wildcards: gene=ENSG00000231389 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000166037_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166037_fitted_models.rds + jobid: 8419 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166037_fitted_models.rds + wildcards: gene=ENSG00000166037 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000133243_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133243_fitted_models.rds + jobid: 13540 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133243_fitted_models.rds + wildcards: gene=ENSG00000133243 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000114439_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114439_fitted_models.rds + jobid: 2946 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114439_fitted_models.rds + wildcards: gene=ENSG00000114439 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163960_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163960_fitted_models.rds + jobid: 3315 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163960_fitted_models.rds + wildcards: gene=ENSG00000163960 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000125864_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125864_fitted_models.rds + jobid: 13160 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125864_fitted_models.rds + wildcards: gene=ENSG00000125864 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000162522_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162522_fitted_models.rds + jobid: 365 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162522_fitted_models.rds + wildcards: gene=ENSG00000162522 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000152234_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000152234_fitted_models.rds + jobid: 12959 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000152234_fitted_models.rds + wildcards: gene=ENSG00000152234 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000215808_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000215808_fitted_models.rds + jobid: 1471 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000215808_fitted_models.rds + wildcards: gene=ENSG00000215808 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000134824_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134824_fitted_models.rds + jobid: 8087 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134824_fitted_models.rds + wildcards: gene=ENSG00000134824 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000179271_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179271_fitted_models.rds + jobid: 13811 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179271_fitted_models.rds + wildcards: gene=ENSG00000179271 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000112406_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112406_fitted_models.rds + jobid: 5258 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112406_fitted_models.rds + wildcards: gene=ENSG00000112406 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000172893_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172893_fitted_models.rds + jobid: 8300 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172893_fitted_models.rds + wildcards: gene=ENSG00000172893 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000114209_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114209_fitted_models.rds + jobid: 3195 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114209_fitted_models.rds + wildcards: gene=ENSG00000114209 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000115233_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115233_fitted_models.rds + jobid: 2146 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115233_fitted_models.rds + wildcards: gene=ENSG00000115233 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000099864_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099864_fitted_models.rds + jobid: 13490 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099864_fitted_models.rds + wildcards: gene=ENSG00000099864 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000132698_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132698_fitted_models.rds + jobid: 1037 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132698_fitted_models.rds + wildcards: gene=ENSG00000132698 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000178104_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000178104_fitted_models.rds + jobid: 889 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000178104_fitted_models.rds + wildcards: gene=ENSG00000178104 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000168758_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168758_fitted_models.rds + jobid: 1944 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168758_fitted_models.rds + wildcards: gene=ENSG00000168758 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000223609_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000223609_fitted_models.rds + jobid: 7836 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000223609_fitted_models.rds + wildcards: gene=ENSG00000223609 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000115350_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115350_fitted_models.rds + jobid: 1878 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115350_fitted_models.rds + wildcards: gene=ENSG00000115350 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000116209_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116209_fitted_models.rds + jobid: 573 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116209_fitted_models.rds + wildcards: gene=ENSG00000116209 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000148341_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000148341_fitted_models.rds + jobid: 7631 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000148341_fitted_models.rds + wildcards: gene=ENSG00000148341 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000136827_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136827_fitted_models.rds + jobid: 7644 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136827_fitted_models.rds + wildcards: gene=ENSG00000136827 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000174243_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000174243_fitted_models.rds + jobid: 9437 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000174243_fitted_models.rds + wildcards: gene=ENSG00000174243 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000243927_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000243927_fitted_models.rds + jobid: 15072 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000243927_fitted_models.rds + wildcards: gene=ENSG00000243927 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000184349_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184349_fitted_models.rds + jobid: 4195 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184349_fitted_models.rds + wildcards: gene=ENSG00000184349 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000079102_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000079102_fitted_models.rds + jobid: 6940 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000079102_fitted_models.rds + wildcards: gene=ENSG00000079102 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000105404_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105404_fitted_models.rds + jobid: 14208 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105404_fitted_models.rds + wildcards: gene=ENSG00000105404 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000131174_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131174_fitted_models.rds + jobid: 6351 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131174_fitted_models.rds + wildcards: gene=ENSG00000131174 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164902_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164902_fitted_models.rds + jobid: 4249 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164902_fitted_models.rds + wildcards: gene=ENSG00000164902 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000197721_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197721_fitted_models.rds + jobid: 1315 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197721_fitted_models.rds + wildcards: gene=ENSG00000197721 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000006625_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000006625_fitted_models.rds + jobid: 5502 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000006625_fitted_models.rds + wildcards: gene=ENSG00000006625 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000115738_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115738_fitted_models.rds + jobid: 1530 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115738_fitted_models.rds + wildcards: gene=ENSG00000115738 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000085433_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000085433_fitted_models.rds + jobid: 761 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000085433_fitted_models.rds + wildcards: gene=ENSG00000085433 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000065243_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000065243_fitted_models.rds + jobid: 689 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000065243_fitted_models.rds + wildcards: gene=ENSG00000065243 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163191_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163191_fitted_models.rds + jobid: 961 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163191_fitted_models.rds + wildcards: gene=ENSG00000163191 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000187630_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000187630_fitted_models.rds + jobid: 10300 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000187630_fitted_models.rds + wildcards: gene=ENSG00000187630 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000105516_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105516_fitted_models.rds + jobid: 14355 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105516_fitted_models.rds + wildcards: gene=ENSG00000105516 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000183723_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183723_fitted_models.rds + jobid: 11707 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183723_fitted_models.rds + wildcards: gene=ENSG00000183723 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000175166_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175166_fitted_models.rds + jobid: 3254 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175166_fitted_models.rds + wildcards: gene=ENSG00000175166 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000142534_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142534_fitted_models.rds + jobid: 14390 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142534_fitted_models.rds + wildcards: gene=ENSG00000142534 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000085063_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000085063_fitted_models.rds + jobid: 7967 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000085063_fitted_models.rds + wildcards: gene=ENSG00000085063 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000101361_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101361_fitted_models.rds + jobid: 13096 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101361_fitted_models.rds + wildcards: gene=ENSG00000101361 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000130811_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130811_fitted_models.rds + jobid: 13712 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130811_fitted_models.rds + wildcards: gene=ENSG00000130811 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164031_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164031_fitted_models.rds + jobid: 3658 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164031_fitted_models.rds + wildcards: gene=ENSG00000164031 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000142039_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142039_fitted_models.rds + jobid: 14200 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142039_fitted_models.rds + wildcards: gene=ENSG00000142039 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000175906_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175906_fitted_models.rds + jobid: 12410 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175906_fitted_models.rds + wildcards: gene=ENSG00000175906 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000130921_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130921_fitted_models.rds + jobid: 9918 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130921_fitted_models.rds + wildcards: gene=ENSG00000130921 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000155115_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000155115_fitted_models.rds + jobid: 5157 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000155115_fitted_models.rds + wildcards: gene=ENSG00000155115 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000122694_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000122694_fitted_models.rds + jobid: 7299 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000122694_fitted_models.rds + wildcards: gene=ENSG00000122694 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000185220_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185220_fitted_models.rds + jobid: 1507 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185220_fitted_models.rds + wildcards: gene=ENSG00000185220 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000063180_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000063180_fitted_models.rds + jobid: 14356 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000063180_fitted_models.rds + wildcards: gene=ENSG00000063180 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000166228_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166228_fitted_models.rds + jobid: 8839 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166228_fitted_models.rds + wildcards: gene=ENSG00000166228 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000182400_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182400_fitted_models.rds + jobid: 10367 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182400_fitted_models.rds + wildcards: gene=ENSG00000182400 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000171813_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171813_fitted_models.rds + jobid: 9167 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171813_fitted_models.rds + wildcards: gene=ENSG00000171813 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000105821_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105821_fitted_models.rds + jobid: 5831 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105821_fitted_models.rds + wildcards: gene=ENSG00000105821 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000150093_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000150093_fitted_models.rds + jobid: 8724 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000150093_fitted_models.rds + wildcards: gene=ENSG00000150093 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000165650_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165650_fitted_models.rds + jobid: 9105 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165650_fitted_models.rds + wildcards: gene=ENSG00000165650 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000143569_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143569_fitted_models.rds + jobid: 987 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143569_fitted_models.rds + wildcards: gene=ENSG00000143569 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000158615_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000158615_fitted_models.rds + jobid: 1282 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000158615_fitted_models.rds + wildcards: gene=ENSG00000158615 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000124225_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124225_fitted_models.rds + jobid: 13405 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124225_fitted_models.rds + wildcards: gene=ENSG00000124225 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000114315_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114315_fitted_models.rds + jobid: 3293 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114315_fitted_models.rds + wildcards: gene=ENSG00000114315 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000127328_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000127328_fitted_models.rds + jobid: 9648 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000127328_fitted_models.rds + wildcards: gene=ENSG00000127328 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000105176_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105176_fitted_models.rds + jobid: 14000 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105176_fitted_models.rds + wildcards: gene=ENSG00000105176 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000065057_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000065057_fitted_models.rds + jobid: 11289 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000065057_fitted_models.rds + wildcards: gene=ENSG00000065057 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000186174_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000186174_fitted_models.rds + jobid: 8515 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000186174_fitted_models.rds + wildcards: gene=ENSG00000186174 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000169564_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169564_fitted_models.rds + jobid: 1819 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169564_fitted_models.rds + wildcards: gene=ENSG00000169564 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000133315_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133315_fitted_models.rds + jobid: 8137 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133315_fitted_models.rds + wildcards: gene=ENSG00000133315 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000182853_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182853_fitted_models.rds + jobid: 11997 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182853_fitted_models.rds + wildcards: gene=ENSG00000182853 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000143653_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143653_fitted_models.rds + jobid: 1494 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143653_fitted_models.rds + wildcards: gene=ENSG00000143653 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000188573_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188573_fitted_models.rds + jobid: 4465 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188573_fitted_models.rds + wildcards: gene=ENSG00000188573 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000143418_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143418_fitted_models.rds + jobid: 927 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143418_fitted_models.rds + wildcards: gene=ENSG00000143418 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000166922_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166922_fitted_models.rds + jobid: 10760 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166922_fitted_models.rds + wildcards: gene=ENSG00000166922 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000274605_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000274605_fitted_models.rds + jobid: 10196 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000274605_fitted_models.rds + wildcards: gene=ENSG00000274605 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000146215_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000146215_fitted_models.rds + jobid: 4960 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000146215_fitted_models.rds + wildcards: gene=ENSG00000146215 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000188242_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188242_fitted_models.rds + jobid: 3903 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188242_fitted_models.rds + wildcards: gene=ENSG00000188242 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000113387_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113387_fitted_models.rds + jobid: 3967 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113387_fitted_models.rds + wildcards: gene=ENSG00000113387 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000186439_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000186439_fitted_models.rds + jobid: 5203 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000186439_fitted_models.rds + wildcards: gene=ENSG00000186439 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000166816_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166816_fitted_models.rds + jobid: 11823 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166816_fitted_models.rds + wildcards: gene=ENSG00000166816 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000113163_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113163_fitted_models.rds + jobid: 4106 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113163_fitted_models.rds + wildcards: gene=ENSG00000113163 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000141232_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141232_fitted_models.rds + jobid: 12532 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141232_fitted_models.rds + wildcards: gene=ENSG00000141232 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000067064_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000067064_fitted_models.rds + jobid: 8609 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000067064_fitted_models.rds + wildcards: gene=ENSG00000067064 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000149925_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000149925_fitted_models.rds + jobid: 11547 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000149925_fitted_models.rds + wildcards: gene=ENSG00000149925 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000231312_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000231312_fitted_models.rds + jobid: 1698 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000231312_fitted_models.rds + wildcards: gene=ENSG00000231312 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000168906_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168906_fitted_models.rds + jobid: 1895 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168906_fitted_models.rds + wildcards: gene=ENSG00000168906 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000160345_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160345_fitted_models.rds + jobid: 7699 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160345_fitted_models.rds + wildcards: gene=ENSG00000160345 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000181885_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000181885_fitted_models.rds + jobid: 12049 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000181885_fitted_models.rds + wildcards: gene=ENSG00000181885 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000124541_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124541_fitted_models.rds + jobid: 4951 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124541_fitted_models.rds + wildcards: gene=ENSG00000124541 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000160752_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160752_fitted_models.rds + jobid: 1021 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160752_fitted_models.rds + wildcards: gene=ENSG00000160752 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000106554_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106554_fitted_models.rds + jobid: 5942 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106554_fitted_models.rds + wildcards: gene=ENSG00000106554 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000075914_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000075914_fitted_models.rds + jobid: 2691 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000075914_fitted_models.rds + wildcards: gene=ENSG00000075914 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000099139_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099139_fitted_models.rds + jobid: 7362 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099139_fitted_models.rds + wildcards: gene=ENSG00000099139 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000060762_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000060762_fitted_models.rds + jobid: 5335 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000060762_fitted_models.rds + wildcards: gene=ENSG00000060762 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000269556_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000269556_fitted_models.rds + jobid: 6545 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000269556_fitted_models.rds + wildcards: gene=ENSG00000269556 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000142875_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142875_fitted_models.rds + jobid: 664 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142875_fitted_models.rds + wildcards: gene=ENSG00000142875 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163463_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163463_fitted_models.rds + jobid: 1009 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163463_fitted_models.rds + wildcards: gene=ENSG00000163463 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000238266_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000238266_fitted_models.rds + jobid: 8630 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000238266_fitted_models.rds + wildcards: gene=ENSG00000238266 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000180694_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000180694_fitted_models.rds + jobid: 6932 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000180694_fitted_models.rds + wildcards: gene=ENSG00000180694 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000140043_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140043_fitted_models.rds + jobid: 10542 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140043_fitted_models.rds + wildcards: gene=ENSG00000140043 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000144713_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000144713_fitted_models.rds + jobid: 2551 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000144713_fitted_models.rds + wildcards: gene=ENSG00000144713 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000115310_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115310_fitted_models.rds + jobid: 1750 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115310_fitted_models.rds + wildcards: gene=ENSG00000115310 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000221916_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000221916_fitted_models.rds + jobid: 14375 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000221916_fitted_models.rds + wildcards: gene=ENSG00000221916 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000108107_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108107_fitted_models.rds + jobid: 14526 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108107_fitted_models.rds + wildcards: gene=ENSG00000108107 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000113649_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113649_fitted_models.rds + jobid: 4390 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113649_fitted_models.rds + wildcards: gene=ENSG00000113649 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163492_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163492_fitted_models.rds + jobid: 2219 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163492_fitted_models.rds + wildcards: gene=ENSG00000163492 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000211584_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000211584_fitted_models.rds + jobid: 9424 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000211584_fitted_models.rds + wildcards: gene=ENSG00000211584 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000206503_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000206503_fitted_models.rds + jobid: 4750 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000206503_fitted_models.rds + wildcards: gene=ENSG00000206503 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000263513_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000263513_fitted_models.rds + jobid: 859 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000263513_fitted_models.rds + wildcards: gene=ENSG00000263513 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000157216_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000157216_fitted_models.rds + jobid: 577 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000157216_fitted_models.rds + wildcards: gene=ENSG00000157216 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000128595_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128595_fitted_models.rds + jobid: 5915 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128595_fitted_models.rds + wildcards: gene=ENSG00000128595 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000033867_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000033867_fitted_models.rds + jobid: 2601 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000033867_fitted_models.rds + wildcards: gene=ENSG00000033867 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000145777_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145777_fitted_models.rds + jobid: 4205 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145777_fitted_models.rds + wildcards: gene=ENSG00000145777 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000162188_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162188_fitted_models.rds + jobid: 8109 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162188_fitted_models.rds + wildcards: gene=ENSG00000162188 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000138083_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138083_fitted_models.rds + jobid: 1719 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138083_fitted_models.rds + wildcards: gene=ENSG00000138083 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000060688_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000060688_fitted_models.rds + jobid: 336 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000060688_fitted_models.rds + wildcards: gene=ENSG00000060688 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000130962_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130962_fitted_models.rds + jobid: 6168 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130962_fitted_models.rds + wildcards: gene=ENSG00000130962 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000065054_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000065054_fitted_models.rds + jobid: 11288 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000065054_fitted_models.rds + wildcards: gene=ENSG00000065054 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000142409_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142409_fitted_models.rds + jobid: 14542 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142409_fitted_models.rds + wildcards: gene=ENSG00000142409 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000137094_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137094_fitted_models.rds + jobid: 7273 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137094_fitted_models.rds + wildcards: gene=ENSG00000137094 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000057757_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000057757_fitted_models.rds + jobid: 243 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000057757_fitted_models.rds + wildcards: gene=ENSG00000057757 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000172869_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172869_fitted_models.rds + jobid: 4233 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172869_fitted_models.rds + wildcards: gene=ENSG00000172869 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000204227_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204227_fitted_models.rds + jobid: 4846 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204227_fitted_models.rds + wildcards: gene=ENSG00000204227 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:34 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000132768_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132768_fitted_models.rds + jobid: 491 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132768_fitted_models.rds + wildcards: gene=ENSG00000132768 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000104413_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104413_fitted_models.rds + jobid: 6952 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104413_fitted_models.rds + wildcards: gene=ENSG00000104413 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000228623_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000228623_fitted_models.rds + jobid: 7507 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000228623_fitted_models.rds + wildcards: gene=ENSG00000228623 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000151778_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000151778_fitted_models.rds + jobid: 10077 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000151778_fitted_models.rds + wildcards: gene=ENSG00000151778 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000107566_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107566_fitted_models.rds + jobid: 9006 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107566_fitted_models.rds + wildcards: gene=ENSG00000107566 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000185650_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185650_fitted_models.rds + jobid: 10506 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185650_fitted_models.rds + wildcards: gene=ENSG00000185650 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000148200_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000148200_fitted_models.rds + jobid: 7561 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000148200_fitted_models.rds + wildcards: gene=ENSG00000148200 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000162385_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162385_fitted_models.rds + jobid: 566 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162385_fitted_models.rds + wildcards: gene=ENSG00000162385 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000087502_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000087502_fitted_models.rds + jobid: 9367 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000087502_fitted_models.rds + wildcards: gene=ENSG00000087502 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000129946_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000129946_fitted_models.rds + jobid: 13479 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000129946_fitted_models.rds + wildcards: gene=ENSG00000129946 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000188290_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188290_fitted_models.rds + jobid: 10 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188290_fitted_models.rds + wildcards: gene=ENSG00000188290 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000011332_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000011332_fitted_models.rds + jobid: 14121 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000011332_fitted_models.rds + wildcards: gene=ENSG00000011332 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000151503_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000151503_fitted_models.rds + jobid: 8596 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000151503_fitted_models.rds + wildcards: gene=ENSG00000151503 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000113558_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113558_fitted_models.rds + jobid: 4287 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113558_fitted_models.rds + wildcards: gene=ENSG00000113558 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000131652_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131652_fitted_models.rds + jobid: 11332 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131652_fitted_models.rds + wildcards: gene=ENSG00000131652 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000134873_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134873_fitted_models.rds + jobid: 10176 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134873_fitted_models.rds + wildcards: gene=ENSG00000134873 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100321_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100321_fitted_models.rds + jobid: 14883 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100321_fitted_models.rds + wildcards: gene=ENSG00000100321 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000162636_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162636_fitted_models.rds + jobid: 755 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162636_fitted_models.rds + wildcards: gene=ENSG00000162636 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000151665_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000151665_fitted_models.rds + jobid: 1725 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000151665_fitted_models.rds + wildcards: gene=ENSG00000151665 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000154553_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000154553_fitted_models.rds + jobid: 3886 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000154553_fitted_models.rds + wildcards: gene=ENSG00000154553 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000168890_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168890_fitted_models.rds + jobid: 1900 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168890_fitted_models.rds + wildcards: gene=ENSG00000168890 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164111_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164111_fitted_models.rds + jobid: 3725 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164111_fitted_models.rds + wildcards: gene=ENSG00000164111 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000143819_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143819_fitted_models.rds + jobid: 1388 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143819_fitted_models.rds + wildcards: gene=ENSG00000143819 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000158246_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000158246_fitted_models.rds + jobid: 295 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000158246_fitted_models.rds + wildcards: gene=ENSG00000158246 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000258982_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000258982_fitted_models.rds + jobid: 10670 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000258982_fitted_models.rds + wildcards: gene=ENSG00000258982 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000185787_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185787_fitted_models.rds + jobid: 11098 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185787_fitted_models.rds + wildcards: gene=ENSG00000185787 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100300_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100300_fitted_models.rds + jobid: 14941 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100300_fitted_models.rds + wildcards: gene=ENSG00000100300 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000250046_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000250046_fitted_models.rds + jobid: 3708 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000250046_fitted_models.rds + wildcards: gene=ENSG00000250046 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000180182_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000180182_fitted_models.rds + jobid: 6178 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000180182_fitted_models.rds + wildcards: gene=ENSG00000180182 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000173334_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173334_fitted_models.rds + jobid: 7057 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173334_fitted_models.rds + wildcards: gene=ENSG00000173334 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000106278_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106278_fitted_models.rds + jobid: 5886 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106278_fitted_models.rds + wildcards: gene=ENSG00000106278 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000104388_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104388_fitted_models.rds + jobid: 6838 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104388_fitted_models.rds + wildcards: gene=ENSG00000104388 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000108826_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108826_fitted_models.rds + jobid: 12519 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108826_fitted_models.rds + wildcards: gene=ENSG00000108826 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000253636_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000253636_fitted_models.rds + jobid: 6881 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000253636_fitted_models.rds + wildcards: gene=ENSG00000253636 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000023041_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000023041_fitted_models.rds + jobid: 9083 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000023041_fitted_models.rds + wildcards: gene=ENSG00000023041 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100380_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100380_fitted_models.rds + jobid: 14897 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100380_fitted_models.rds + wildcards: gene=ENSG00000100380 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000039123_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000039123_fitted_models.rds + jobid: 4028 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000039123_fitted_models.rds + wildcards: gene=ENSG00000039123 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000180098_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000180098_fitted_models.rds + jobid: 321 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000180098_fitted_models.rds + wildcards: gene=ENSG00000180098 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000166145_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166145_fitted_models.rds + jobid: 10810 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166145_fitted_models.rds + wildcards: gene=ENSG00000166145 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000138768_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138768_fitted_models.rds + jobid: 3577 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138768_fitted_models.rds + wildcards: gene=ENSG00000138768 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000184500_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184500_fitted_models.rds + jobid: 2912 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184500_fitted_models.rds + wildcards: gene=ENSG00000184500 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000204922_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204922_fitted_models.rds + jobid: 8106 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204922_fitted_models.rds + wildcards: gene=ENSG00000204922 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000153406_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153406_fitted_models.rds + jobid: 11364 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153406_fitted_models.rds + wildcards: gene=ENSG00000153406 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000204387_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204387_fitted_models.rds + jobid: 4807 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204387_fitted_models.rds + wildcards: gene=ENSG00000204387 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000182108_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182108_fitted_models.rds + jobid: 11398 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182108_fitted_models.rds + wildcards: gene=ENSG00000182108 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000101443_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101443_fitted_models.rds + jobid: 13330 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101443_fitted_models.rds + wildcards: gene=ENSG00000101443 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000102900_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102900_fitted_models.rds + jobid: 11667 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102900_fitted_models.rds + wildcards: gene=ENSG00000102900 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000112977_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112977_fitted_models.rds + jobid: 3941 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112977_fitted_models.rds + wildcards: gene=ENSG00000112977 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000120896_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000120896_fitted_models.rds + jobid: 6694 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000120896_fitted_models.rds + wildcards: gene=ENSG00000120896 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000134308_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134308_fitted_models.rds + jobid: 1539 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134308_fitted_models.rds + wildcards: gene=ENSG00000134308 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000140564_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140564_fitted_models.rds + jobid: 11172 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140564_fitted_models.rds + wildcards: gene=ENSG00000140564 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000151552_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000151552_fitted_models.rds + jobid: 3438 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000151552_fitted_models.rds + wildcards: gene=ENSG00000151552 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000092094_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000092094_fitted_models.rds + jobid: 10245 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000092094_fitted_models.rds + wildcards: gene=ENSG00000092094 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000179344_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179344_fitted_models.rds + jobid: 4830 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179344_fitted_models.rds + wildcards: gene=ENSG00000179344 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000249859_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000249859_fitted_models.rds + jobid: 7064 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000249859_fitted_models.rds + wildcards: gene=ENSG00000249859 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000121410_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000121410_fitted_models.rds + jobid: 14604 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000121410_fitted_models.rds + wildcards: gene=ENSG00000121410 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198498_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198498_fitted_models.rds + jobid: 3824 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198498_fitted_models.rds + wildcards: gene=ENSG00000198498 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000162604_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162604_fitted_models.rds + jobid: 598 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162604_fitted_models.rds + wildcards: gene=ENSG00000162604 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000162076_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162076_fitted_models.rds + jobid: 11321 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162076_fitted_models.rds + wildcards: gene=ENSG00000162076 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000223573_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000223573_fitted_models.rds + jobid: 13620 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000223573_fitted_models.rds + wildcards: gene=ENSG00000223573 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000232388_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000232388_fitted_models.rds + jobid: 13173 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000232388_fitted_models.rds + wildcards: gene=ENSG00000232388 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000099337_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099337_fitted_models.rds + jobid: 14126 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099337_fitted_models.rds + wildcards: gene=ENSG00000099337 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000072364_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000072364_fitted_models.rds + jobid: 4279 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000072364_fitted_models.rds + wildcards: gene=ENSG00000072364 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000160818_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160818_fitted_models.rds + jobid: 1056 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160818_fitted_models.rds + wildcards: gene=ENSG00000160818 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000119640_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119640_fitted_models.rds + jobid: 10562 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119640_fitted_models.rds + wildcards: gene=ENSG00000119640 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000181350_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000181350_fitted_models.rds + jobid: 12142 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000181350_fitted_models.rds + wildcards: gene=ENSG00000181350 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000175183_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175183_fitted_models.rds + jobid: 9670 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175183_fitted_models.rds + wildcards: gene=ENSG00000175183 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000176105_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176105_fitted_models.rds + jobid: 12838 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176105_fitted_models.rds + wildcards: gene=ENSG00000176105 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000135185_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135185_fitted_models.rds + jobid: 5686 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135185_fitted_models.rds + wildcards: gene=ENSG00000135185 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000085832_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000085832_fitted_models.rds + jobid: 545 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000085832_fitted_models.rds + wildcards: gene=ENSG00000085832 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000070540_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000070540_fitted_models.rds + jobid: 12646 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000070540_fitted_models.rds + wildcards: gene=ENSG00000070540 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000143590_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143590_fitted_models.rds + jobid: 1005 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143590_fitted_models.rds + wildcards: gene=ENSG00000143590 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000123975_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000123975_fitted_models.rds + jobid: 7397 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000123975_fitted_models.rds + wildcards: gene=ENSG00000123975 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000039068_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000039068_fitted_models.rds + jobid: 11767 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000039068_fitted_models.rds + wildcards: gene=ENSG00000039068 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100387_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100387_fitted_models.rds + jobid: 14899 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100387_fitted_models.rds + wildcards: gene=ENSG00000100387 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000159377_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000159377_fitted_models.rds + jobid: 948 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000159377_fitted_models.rds + wildcards: gene=ENSG00000159377 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000284691_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000284691_fitted_models.rds + jobid: 15196 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000284691_fitted_models.rds + wildcards: gene=ENSG00000284691 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000130830_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130830_fitted_models.rds + jobid: 6602 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130830_fitted_models.rds + wildcards: gene=ENSG00000130830 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000123472_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000123472_fitted_models.rds + jobid: 534 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000123472_fitted_models.rds + wildcards: gene=ENSG00000123472 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000171130_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171130_fitted_models.rds + jobid: 6027 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171130_fitted_models.rds + wildcards: gene=ENSG00000171130 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000232956_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000232956_fitted_models.rds + jobid: 5566 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000232956_fitted_models.rds + wildcards: gene=ENSG00000232956 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000155096_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000155096_fitted_models.rds + jobid: 6993 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000155096_fitted_models.rds + wildcards: gene=ENSG00000155096 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000135480_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135480_fitted_models.rds + jobid: 9488 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135480_fitted_models.rds + wildcards: gene=ENSG00000135480 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000014641_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000014641_fitted_models.rds + jobid: 1785 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000014641_fitted_models.rds + wildcards: gene=ENSG00000014641 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000131981_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131981_fitted_models.rds + jobid: 10429 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131981_fitted_models.rds + wildcards: gene=ENSG00000131981 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000237136_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000237136_fitted_models.rds + jobid: 3783 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000237136_fitted_models.rds + wildcards: gene=ENSG00000237136 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000183474_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183474_fitted_models.rds + jobid: 4078 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183474_fitted_models.rds + wildcards: gene=ENSG00000183474 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000232445_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000232445_fitted_models.rds + jobid: 5812 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000232445_fitted_models.rds + wildcards: gene=ENSG00000232445 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000231064_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000231064_fitted_models.rds + jobid: 1012 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000231064_fitted_models.rds + wildcards: gene=ENSG00000231064 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000204682_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204682_fitted_models.rds + jobid: 8682 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204682_fitted_models.rds + wildcards: gene=ENSG00000204682 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000213614_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000213614_fitted_models.rds + jobid: 11021 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000213614_fitted_models.rds + wildcards: gene=ENSG00000213614 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000197971_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197971_fitted_models.rds + jobid: 13052 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197971_fitted_models.rds + wildcards: gene=ENSG00000197971 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000090905_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000090905_fitted_models.rds + jobid: 11490 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000090905_fitted_models.rds + wildcards: gene=ENSG00000090905 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000130208_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130208_fitted_models.rds + jobid: 14269 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130208_fitted_models.rds + wildcards: gene=ENSG00000130208 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000140416_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140416_fitted_models.rds + jobid: 10944 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140416_fitted_models.rds + wildcards: gene=ENSG00000140416 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000125817_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125817_fitted_models.rds + jobid: 13117 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125817_fitted_models.rds + wildcards: gene=ENSG00000125817 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163344_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163344_fitted_models.rds + jobid: 994 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163344_fitted_models.rds + wildcards: gene=ENSG00000163344 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000138459_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138459_fitted_models.rds + jobid: 2961 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138459_fitted_models.rds + wildcards: gene=ENSG00000138459 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000168496_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168496_fitted_models.rds + jobid: 8086 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168496_fitted_models.rds + wildcards: gene=ENSG00000168496 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000274652_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000274652_fitted_models.rds + jobid: 10120 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000274652_fitted_models.rds + wildcards: gene=ENSG00000274652 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000124228_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124228_fitted_models.rds + jobid: 13363 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124228_fitted_models.rds + wildcards: gene=ENSG00000124228 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000138796_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138796_fitted_models.rds + jobid: 3685 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138796_fitted_models.rds + wildcards: gene=ENSG00000138796 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000243678_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000243678_fitted_models.rds + jobid: 12535 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000243678_fitted_models.rds + wildcards: gene=ENSG00000243678 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000116922_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116922_fitted_models.rds + jobid: 415 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116922_fitted_models.rds + wildcards: gene=ENSG00000116922 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000137818_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137818_fitted_models.rds + jobid: 11010 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137818_fitted_models.rds + wildcards: gene=ENSG00000137818 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167491_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167491_fitted_models.rds + jobid: 13946 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167491_fitted_models.rds + wildcards: gene=ENSG00000167491 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164332_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164332_fitted_models.rds + jobid: 4446 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164332_fitted_models.rds + wildcards: gene=ENSG00000164332 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000156508_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000156508_fitted_models.rds + jobid: 5044 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000156508_fitted_models.rds + wildcards: gene=ENSG00000156508 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000165949_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165949_fitted_models.rds + jobid: 10641 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165949_fitted_models.rds + wildcards: gene=ENSG00000165949 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198862_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198862_fitted_models.rds + jobid: 15035 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198862_fitted_models.rds + wildcards: gene=ENSG00000198862 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000141030_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141030_fitted_models.rds + jobid: 12151 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141030_fitted_models.rds + wildcards: gene=ENSG00000141030 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000185808_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185808_fitted_models.rds + jobid: 15088 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185808_fitted_models.rds + wildcards: gene=ENSG00000185808 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000139579_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000139579_fitted_models.rds + jobid: 9552 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000139579_fitted_models.rds + wildcards: gene=ENSG00000139579 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000146007_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000146007_fitted_models.rds + jobid: 4351 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000146007_fitted_models.rds + wildcards: gene=ENSG00000146007 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198732_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198732_fitted_models.rds + jobid: 10515 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198732_fitted_models.rds + wildcards: gene=ENSG00000198732 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000131469_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131469_fitted_models.rds + jobid: 12402 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131469_fitted_models.rds + wildcards: gene=ENSG00000131469 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198015_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198015_fitted_models.rds + jobid: 9705 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198015_fitted_models.rds + wildcards: gene=ENSG00000198015 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000220205_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000220205_fitted_models.rds + jobid: 12090 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000220205_fitted_models.rds + wildcards: gene=ENSG00000220205 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000119408_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119408_fitted_models.rds + jobid: 7559 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119408_fitted_models.rds + wildcards: gene=ENSG00000119408 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000110218_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000110218_fitted_models.rds + jobid: 8407 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000110218_fitted_models.rds + wildcards: gene=ENSG00000110218 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000196976_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196976_fitted_models.rds + jobid: 6595 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196976_fitted_models.rds + wildcards: gene=ENSG00000196976 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000118707_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000118707_fitted_models.rds + jobid: 13271 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000118707_fitted_models.rds + wildcards: gene=ENSG00000118707 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000137992_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137992_fitted_models.rds + jobid: 739 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137992_fitted_models.rds + wildcards: gene=ENSG00000137992 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000119878_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119878_fitted_models.rds + jobid: 1726 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119878_fitted_models.rds + wildcards: gene=ENSG00000119878 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000145833_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145833_fitted_models.rds + jobid: 4296 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145833_fitted_models.rds + wildcards: gene=ENSG00000145833 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000109971_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000109971_fitted_models.rds + jobid: 8548 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000109971_fitted_models.rds + wildcards: gene=ENSG00000109971 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000174606_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000174606_fitted_models.rds + jobid: 1344 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000174606_fitted_models.rds + wildcards: gene=ENSG00000174606 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000076248_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000076248_fitted_models.rds + jobid: 9782 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000076248_fitted_models.rds + wildcards: gene=ENSG00000076248 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000068976_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000068976_fitted_models.rds + jobid: 8159 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000068976_fitted_models.rds + wildcards: gene=ENSG00000068976 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000166483_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166483_fitted_models.rds + jobid: 7876 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166483_fitted_models.rds + wildcards: gene=ENSG00000166483 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000111845_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111845_fitted_models.rds + jobid: 4615 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111845_fitted_models.rds + wildcards: gene=ENSG00000111845 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000166886_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166886_fitted_models.rds + jobid: 9576 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166886_fitted_models.rds + wildcards: gene=ENSG00000166886 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000169750_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169750_fitted_models.rds + jobid: 12806 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169750_fitted_models.rds + wildcards: gene=ENSG00000169750 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000170144_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170144_fitted_models.rds + jobid: 2204 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170144_fitted_models.rds + wildcards: gene=ENSG00000170144 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000118513_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000118513_fitted_models.rds + jobid: 5236 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000118513_fitted_models.rds + wildcards: gene=ENSG00000118513 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000255302_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000255302_fitted_models.rds + jobid: 10875 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000255302_fitted_models.rds + wildcards: gene=ENSG00000255302 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000128654_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128654_fitted_models.rds + jobid: 2202 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128654_fitted_models.rds + wildcards: gene=ENSG00000128654 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000090863_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000090863_fitted_models.rds + jobid: 11817 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000090863_fitted_models.rds + wildcards: gene=ENSG00000090863 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000150991_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000150991_fitted_models.rds + jobid: 9939 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000150991_fitted_models.rds + wildcards: gene=ENSG00000150991 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000241468_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000241468_fitted_models.rds + jobid: 5745 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000241468_fitted_models.rds + wildcards: gene=ENSG00000241468 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000150433_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000150433_fitted_models.rds + jobid: 8561 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000150433_fitted_models.rds + wildcards: gene=ENSG00000150433 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000082641_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000082641_fitted_models.rds + jobid: 12485 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000082641_fitted_models.rds + wildcards: gene=ENSG00000082641 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000148450_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000148450_fitted_models.rds + jobid: 8689 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000148450_fitted_models.rds + wildcards: gene=ENSG00000148450 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000065150_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000065150_fitted_models.rds + jobid: 10183 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000065150_fitted_models.rds + wildcards: gene=ENSG00000065150 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000116030_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116030_fitted_models.rds + jobid: 2301 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116030_fitted_models.rds + wildcards: gene=ENSG00000116030 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000283013_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000283013_fitted_models.rds + jobid: 6032 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000283013_fitted_models.rds + wildcards: gene=ENSG00000283013 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000188488_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188488_fitted_models.rds + jobid: 10644 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188488_fitted_models.rds + wildcards: gene=ENSG00000188488 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000124299_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124299_fitted_models.rds + jobid: 14019 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124299_fitted_models.rds + wildcards: gene=ENSG00000124299 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000197223_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197223_fitted_models.rds + jobid: 1800 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197223_fitted_models.rds + wildcards: gene=ENSG00000197223 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000187742_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000187742_fitted_models.rds + jobid: 7398 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000187742_fitted_models.rds + wildcards: gene=ENSG00000187742 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000165672_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165672_fitted_models.rds + jobid: 9114 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165672_fitted_models.rds + wildcards: gene=ENSG00000165672 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000135525_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135525_fitted_models.rds + jobid: 5241 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135525_fitted_models.rds + wildcards: gene=ENSG00000135525 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000165169_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165169_fitted_models.rds + jobid: 6170 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165169_fitted_models.rds + wildcards: gene=ENSG00000165169 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164167_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164167_fitted_models.rds + jobid: 3785 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164167_fitted_models.rds + wildcards: gene=ENSG00000164167 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000121644_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000121644_fitted_models.rds + jobid: 1485 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000121644_fitted_models.rds + wildcards: gene=ENSG00000121644 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100580_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100580_fitted_models.rds + jobid: 10583 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100580_fitted_models.rds + wildcards: gene=ENSG00000100580 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000087245_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000087245_fitted_models.rds + jobid: 11651 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000087245_fitted_models.rds + wildcards: gene=ENSG00000087245 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000205155_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000205155_fitted_models.rds + jobid: 14061 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000205155_fitted_models.rds + wildcards: gene=ENSG00000205155 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000155330_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000155330_fitted_models.rds + jobid: 11618 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000155330_fitted_models.rds + wildcards: gene=ENSG00000155330 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000173821_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173821_fitted_models.rds + jobid: 12763 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173821_fitted_models.rds + wildcards: gene=ENSG00000173821 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000089327_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000089327_fitted_models.rds + jobid: 14044 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000089327_fitted_models.rds + wildcards: gene=ENSG00000089327 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000213190_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000213190_fitted_models.rds + jobid: 934 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000213190_fitted_models.rds + wildcards: gene=ENSG00000213190 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000138621_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138621_fitted_models.rds + jobid: 11059 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138621_fitted_models.rds + wildcards: gene=ENSG00000138621 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:35 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000204472_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204472_fitted_models.rds + jobid: 4791 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204472_fitted_models.rds + wildcards: gene=ENSG00000204472 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000063244_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000063244_fitted_models.rds + jobid: 14540 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000063244_fitted_models.rds + wildcards: gene=ENSG00000063244 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000185813_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185813_fitted_models.rds + jobid: 12798 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185813_fitted_models.rds + wildcards: gene=ENSG00000185813 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000171311_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171311_fitted_models.rds + jobid: 8983 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171311_fitted_models.rds + wildcards: gene=ENSG00000171311 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000197930_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197930_fitted_models.rds + jobid: 10411 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197930_fitted_models.rds + wildcards: gene=ENSG00000197930 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000148175_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000148175_fitted_models.rds + jobid: 7544 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000148175_fitted_models.rds + wildcards: gene=ENSG00000148175 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000011304_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000011304_fitted_models.rds + jobid: 13493 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000011304_fitted_models.rds + wildcards: gene=ENSG00000011304 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000066044_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000066044_fitted_models.rds + jobid: 13675 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000066044_fitted_models.rds + wildcards: gene=ENSG00000066044 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000102109_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102109_fitted_models.rds + jobid: 6225 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102109_fitted_models.rds + wildcards: gene=ENSG00000102109 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000130227_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130227_fitted_models.rds + jobid: 6682 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130227_fitted_models.rds + wildcards: gene=ENSG00000130227 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000113552_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113552_fitted_models.rds + jobid: 4379 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113552_fitted_models.rds + wildcards: gene=ENSG00000113552 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000169894_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169894_fitted_models.rds + jobid: 5798 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169894_fitted_models.rds + wildcards: gene=ENSG00000169894 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000148840_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000148840_fitted_models.rds + jobid: 9035 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000148840_fitted_models.rds + wildcards: gene=ENSG00000148840 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000134882_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134882_fitted_models.rds + jobid: 10190 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134882_fitted_models.rds + wildcards: gene=ENSG00000134882 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000121022_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000121022_fitted_models.rds + jobid: 6861 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000121022_fitted_models.rds + wildcards: gene=ENSG00000121022 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000197153_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197153_fitted_models.rds + jobid: 4726 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197153_fitted_models.rds + wildcards: gene=ENSG00000197153 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000154079_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000154079_fitted_models.rds + jobid: 5033 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000154079_fitted_models.rds + wildcards: gene=ENSG00000154079 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000125356_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125356_fitted_models.rds + jobid: 6469 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125356_fitted_models.rds + wildcards: gene=ENSG00000125356 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000257949_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000257949_fitted_models.rds + jobid: 12710 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000257949_fitted_models.rds + wildcards: gene=ENSG00000257949 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000274265_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000274265_fitted_models.rds + jobid: 891 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000274265_fitted_models.rds + wildcards: gene=ENSG00000274265 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000227591_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000227591_fitted_models.rds + jobid: 1317 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000227591_fitted_models.rds + wildcards: gene=ENSG00000227591 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000135404_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135404_fitted_models.rds + jobid: 9528 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135404_fitted_models.rds + wildcards: gene=ENSG00000135404 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000053254_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000053254_fitted_models.rds + jobid: 10606 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000053254_fitted_models.rds + wildcards: gene=ENSG00000053254 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000152977_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000152977_fitted_models.rds + jobid: 3135 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000152977_fitted_models.rds + wildcards: gene=ENSG00000152977 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000272325_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000272325_fitted_models.rds + jobid: 4867 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000272325_fitted_models.rds + wildcards: gene=ENSG00000272325 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000069849_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000069849_fitted_models.rds + jobid: 3116 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000069849_fitted_models.rds + wildcards: gene=ENSG00000069849 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000124789_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124789_fitted_models.rds + jobid: 4647 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124789_fitted_models.rds + wildcards: gene=ENSG00000124789 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000122970_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000122970_fitted_models.rds + jobid: 9795 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000122970_fitted_models.rds + wildcards: gene=ENSG00000122970 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000112992_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112992_fitted_models.rds + jobid: 4010 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112992_fitted_models.rds + wildcards: gene=ENSG00000112992 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000123545_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000123545_fitted_models.rds + jobid: 5107 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000123545_fitted_models.rds + wildcards: gene=ENSG00000123545 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000118939_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000118939_fitted_models.rds + jobid: 10155 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000118939_fitted_models.rds + wildcards: gene=ENSG00000118939 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000112183_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112183_fitted_models.rds + jobid: 4644 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112183_fitted_models.rds + wildcards: gene=ENSG00000112183 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000110717_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000110717_fitted_models.rds + jobid: 8275 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000110717_fitted_models.rds + wildcards: gene=ENSG00000110717 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164056_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164056_fitted_models.rds + jobid: 3735 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164056_fitted_models.rds + wildcards: gene=ENSG00000164056 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000214413_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000214413_fitted_models.rds + jobid: 9079 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000214413_fitted_models.rds + wildcards: gene=ENSG00000214413 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000182093_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182093_fitted_models.rds + jobid: 15101 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182093_fitted_models.rds + wildcards: gene=ENSG00000182093 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000168066_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168066_fitted_models.rds + jobid: 8160 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168066_fitted_models.rds + wildcards: gene=ENSG00000168066 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000120697_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000120697_fitted_models.rds + jobid: 10048 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000120697_fitted_models.rds + wildcards: gene=ENSG00000120697 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000138413_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138413_fitted_models.rds + jobid: 2333 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138413_fitted_models.rds + wildcards: gene=ENSG00000138413 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198805_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198805_fitted_models.rds + jobid: 10248 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198805_fitted_models.rds + wildcards: gene=ENSG00000198805 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000137274_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137274_fitted_models.rds + jobid: 4586 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137274_fitted_models.rds + wildcards: gene=ENSG00000137274 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000153015_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153015_fitted_models.rds + jobid: 4053 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153015_fitted_models.rds + wildcards: gene=ENSG00000153015 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000115446_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115446_fitted_models.rds + jobid: 1956 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115446_fitted_models.rds + wildcards: gene=ENSG00000115446 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000120509_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000120509_fitted_models.rds + jobid: 6310 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000120509_fitted_models.rds + wildcards: gene=ENSG00000120509 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000171681_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171681_fitted_models.rds + jobid: 9319 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171681_fitted_models.rds + wildcards: gene=ENSG00000171681 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000072849_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000072849_fitted_models.rds + jobid: 12022 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000072849_fitted_models.rds + wildcards: gene=ENSG00000072849 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000103148_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000103148_fitted_models.rds + jobid: 11215 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000103148_fitted_models.rds + wildcards: gene=ENSG00000103148 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000168938_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168938_fitted_models.rds + jobid: 4243 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168938_fitted_models.rds + wildcards: gene=ENSG00000168938 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000186010_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000186010_fitted_models.rds + jobid: 13947 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000186010_fitted_models.rds + wildcards: gene=ENSG00000186010 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000071462_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000071462_fitted_models.rds + jobid: 5634 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000071462_fitted_models.rds + wildcards: gene=ENSG00000071462 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163660_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163660_fitted_models.rds + jobid: 3169 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163660_fitted_models.rds + wildcards: gene=ENSG00000163660 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000122566_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000122566_fitted_models.rds + jobid: 5480 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000122566_fitted_models.rds + wildcards: gene=ENSG00000122566 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000204516_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204516_fitted_models.rds + jobid: 4786 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204516_fitted_models.rds + wildcards: gene=ENSG00000204516 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000068831_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000068831_fitted_models.rds + jobid: 8158 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000068831_fitted_models.rds + wildcards: gene=ENSG00000068831 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000213741_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000213741_fitted_models.rds + jobid: 10380 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000213741_fitted_models.rds + wildcards: gene=ENSG00000213741 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000105185_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105185_fitted_models.rds + jobid: 14005 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105185_fitted_models.rds + wildcards: gene=ENSG00000105185 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000153250_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153250_fitted_models.rds + jobid: 2143 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153250_fitted_models.rds + wildcards: gene=ENSG00000153250 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000112394_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112394_fitted_models.rds + jobid: 5159 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112394_fitted_models.rds + wildcards: gene=ENSG00000112394 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000113407_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113407_fitted_models.rds + jobid: 3968 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113407_fitted_models.rds + wildcards: gene=ENSG00000113407 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000169679_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169679_fitted_models.rds + jobid: 2006 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169679_fitted_models.rds + wildcards: gene=ENSG00000169679 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000158710_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000158710_fitted_models.rds + jobid: 1075 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000158710_fitted_models.rds + wildcards: gene=ENSG00000158710 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000175130_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175130_fitted_models.rds + jobid: 357 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175130_fitted_models.rds + wildcards: gene=ENSG00000175130 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000099942_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099942_fitted_models.rds + jobid: 14685 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099942_fitted_models.rds + wildcards: gene=ENSG00000099942 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000136824_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136824_fitted_models.rds + jobid: 7473 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136824_fitted_models.rds + wildcards: gene=ENSG00000136824 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000010244_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000010244_fitted_models.rds + jobid: 12265 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000010244_fitted_models.rds + wildcards: gene=ENSG00000010244 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000150753_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000150753_fitted_models.rds + jobid: 3936 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000150753_fitted_models.rds + wildcards: gene=ENSG00000150753 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000188157_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188157_fitted_models.rds + jobid: 12 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188157_fitted_models.rds + wildcards: gene=ENSG00000188157 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000179085_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179085_fitted_models.rds + jobid: 1008 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179085_fitted_models.rds + wildcards: gene=ENSG00000179085 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000204628_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204628_fitted_models.rds + jobid: 4569 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204628_fitted_models.rds + wildcards: gene=ENSG00000204628 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000141753_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141753_fitted_models.rds + jobid: 12347 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141753_fitted_models.rds + wildcards: gene=ENSG00000141753 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000181315_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000181315_fitted_models.rds + jobid: 4705 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000181315_fitted_models.rds + wildcards: gene=ENSG00000181315 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000059804_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000059804_fitted_models.rds + jobid: 9275 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000059804_fitted_models.rds + wildcards: gene=ENSG00000059804 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000162627_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162627_fitted_models.rds + jobid: 730 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162627_fitted_models.rds + wildcards: gene=ENSG00000162627 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000142544_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142544_fitted_models.rds + jobid: 14439 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142544_fitted_models.rds + wildcards: gene=ENSG00000142544 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000075340_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000075340_fitted_models.rds + jobid: 1828 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000075340_fitted_models.rds + wildcards: gene=ENSG00000075340 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000183684_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183684_fitted_models.rds + jobid: 12795 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183684_fitted_models.rds + wildcards: gene=ENSG00000183684 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000157778_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000157778_fitted_models.rds + jobid: 5378 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000157778_fitted_models.rds + wildcards: gene=ENSG00000157778 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000133872_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133872_fitted_models.rds + jobid: 6741 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133872_fitted_models.rds + wildcards: gene=ENSG00000133872 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000103254_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000103254_fitted_models.rds + jobid: 11244 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000103254_fitted_models.rds + wildcards: gene=ENSG00000103254 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000123352_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000123352_fitted_models.rds + jobid: 9452 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000123352_fitted_models.rds + wildcards: gene=ENSG00000123352 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000127540_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000127540_fitted_models.rds + jobid: 13530 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000127540_fitted_models.rds + wildcards: gene=ENSG00000127540 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000065978_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000065978_fitted_models.rds + jobid: 464 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000065978_fitted_models.rds + wildcards: gene=ENSG00000065978 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000188186_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188186_fitted_models.rds + jobid: 5766 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188186_fitted_models.rds + wildcards: gene=ENSG00000188186 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000203791_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000203791_fitted_models.rds + jobid: 9143 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000203791_fitted_models.rds + wildcards: gene=ENSG00000203791 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000215866_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000215866_fitted_models.rds + jobid: 808 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000215866_fitted_models.rds + wildcards: gene=ENSG00000215866 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000143228_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143228_fitted_models.rds + jobid: 1119 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143228_fitted_models.rds + wildcards: gene=ENSG00000143228 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000107731_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107731_fitted_models.rds + jobid: 8840 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107731_fitted_models.rds + wildcards: gene=ENSG00000107731 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000112208_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112208_fitted_models.rds + jobid: 5019 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112208_fitted_models.rds + wildcards: gene=ENSG00000112208 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000151881_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000151881_fitted_models.rds + jobid: 4006 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000151881_fitted_models.rds + wildcards: gene=ENSG00000151881 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000136854_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136854_fitted_models.rds + jobid: 7586 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136854_fitted_models.rds + wildcards: gene=ENSG00000136854 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000154059_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000154059_fitted_models.rds + jobid: 12910 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000154059_fitted_models.rds + wildcards: gene=ENSG00000154059 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000242372_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000242372_fitted_models.rds + jobid: 13252 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000242372_fitted_models.rds + wildcards: gene=ENSG00000242372 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000011566_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000011566_fitted_models.rds + jobid: 1697 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000011566_fitted_models.rds + wildcards: gene=ENSG00000011566 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000143436_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143436_fitted_models.rds + jobid: 954 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143436_fitted_models.rds + wildcards: gene=ENSG00000143436 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164919_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164919_fitted_models.rds + jobid: 6977 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164919_fitted_models.rds + wildcards: gene=ENSG00000164919 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000068400_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000068400_fitted_models.rds + jobid: 6232 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000068400_fitted_models.rds + wildcards: gene=ENSG00000068400 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000114416_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114416_fitted_models.rds + jobid: 3233 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114416_fitted_models.rds + wildcards: gene=ENSG00000114416 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000012232_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000012232_fitted_models.rds + jobid: 6736 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000012232_fitted_models.rds + wildcards: gene=ENSG00000012232 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000256537_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000256537_fitted_models.rds + jobid: 9300 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000256537_fitted_models.rds + wildcards: gene=ENSG00000256537 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000081923_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000081923_fitted_models.rds + jobid: 13005 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000081923_fitted_models.rds + wildcards: gene=ENSG00000081923 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000250131_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000250131_fitted_models.rds + jobid: 3859 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000250131_fitted_models.rds + wildcards: gene=ENSG00000250131 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000152256_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000152256_fitted_models.rds + jobid: 2187 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000152256_fitted_models.rds + wildcards: gene=ENSG00000152256 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000139269_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000139269_fitted_models.rds + jobid: 9583 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000139269_fitted_models.rds + wildcards: gene=ENSG00000139269 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000197062_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197062_fitted_models.rds + jobid: 4735 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197062_fitted_models.rds + wildcards: gene=ENSG00000197062 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000104889_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104889_fitted_models.rds + jobid: 13799 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104889_fitted_models.rds + wildcards: gene=ENSG00000104889 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000120699_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000120699_fitted_models.rds + jobid: 10049 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000120699_fitted_models.rds + wildcards: gene=ENSG00000120699 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000168476_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168476_fitted_models.rds + jobid: 6687 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168476_fitted_models.rds + wildcards: gene=ENSG00000168476 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000104549_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104549_fitted_models.rds + jobid: 7054 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104549_fitted_models.rds + wildcards: gene=ENSG00000104549 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000128245_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128245_fitted_models.rds + jobid: 14809 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128245_fitted_models.rds + wildcards: gene=ENSG00000128245 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000169499_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169499_fitted_models.rds + jobid: 6782 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169499_fitted_models.rds + wildcards: gene=ENSG00000169499 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000048540_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000048540_fitted_models.rds + jobid: 9331 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000048540_fitted_models.rds + wildcards: gene=ENSG00000048540 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000104824_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104824_fitted_models.rds + jobid: 14141 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104824_fitted_models.rds + wildcards: gene=ENSG00000104824 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167468_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167468_fitted_models.rds + jobid: 13508 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167468_fitted_models.rds + wildcards: gene=ENSG00000167468 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000280164_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000280164_fitted_models.rds + jobid: 15012 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000280164_fitted_models.rds + wildcards: gene=ENSG00000280164 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000129515_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000129515_fitted_models.rds + jobid: 10345 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000129515_fitted_models.rds + wildcards: gene=ENSG00000129515 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000119782_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119782_fitted_models.rds + jobid: 1590 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119782_fitted_models.rds + wildcards: gene=ENSG00000119782 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000116260_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116260_fitted_models.rds + jobid: 1186 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116260_fitted_models.rds + wildcards: gene=ENSG00000116260 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000196141_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196141_fitted_models.rds + jobid: 2280 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196141_fitted_models.rds + wildcards: gene=ENSG00000196141 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167721_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167721_fitted_models.rds + jobid: 11965 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167721_fitted_models.rds + wildcards: gene=ENSG00000167721 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000187555_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000187555_fitted_models.rds + jobid: 11389 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000187555_fitted_models.rds + wildcards: gene=ENSG00000187555 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000284753_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000284753_fitted_models.rds + jobid: 15192 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000284753_fitted_models.rds + wildcards: gene=ENSG00000284753 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000165389_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165389_fitted_models.rds + jobid: 10343 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165389_fitted_models.rds + wildcards: gene=ENSG00000165389 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000213186_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000213186_fitted_models.rds + jobid: 3185 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000213186_fitted_models.rds + wildcards: gene=ENSG00000213186 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000001630_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000001630_fitted_models.rds + jobid: 5704 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000001630_fitted_models.rds + wildcards: gene=ENSG00000001630 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000128849_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128849_fitted_models.rds + jobid: 10926 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128849_fitted_models.rds + wildcards: gene=ENSG00000128849 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000179403_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179403_fitted_models.rds + jobid: 33 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179403_fitted_models.rds + wildcards: gene=ENSG00000179403 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000266964_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000266964_fitted_models.rds + jobid: 14042 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000266964_fitted_models.rds + wildcards: gene=ENSG00000266964 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000269893_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000269893_fitted_models.rds + jobid: 3714 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000269893_fitted_models.rds + wildcards: gene=ENSG00000269893 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000183513_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183513_fitted_models.rds + jobid: 1955 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183513_fitted_models.rds + wildcards: gene=ENSG00000183513 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000253313_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000253313_fitted_models.rds + jobid: 477 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000253313_fitted_models.rds + wildcards: gene=ENSG00000253313 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000197498_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197498_fitted_models.rds + jobid: 5158 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197498_fitted_models.rds + wildcards: gene=ENSG00000197498 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000154813_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000154813_fitted_models.rds + jobid: 2577 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000154813_fitted_models.rds + wildcards: gene=ENSG00000154813 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000139289_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000139289_fitted_models.rds + jobid: 9664 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000139289_fitted_models.rds + wildcards: gene=ENSG00000139289 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000108064_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108064_fitted_models.rds + jobid: 8786 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108064_fitted_models.rds + wildcards: gene=ENSG00000108064 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000172500_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172500_fitted_models.rds + jobid: 8209 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172500_fitted_models.rds + wildcards: gene=ENSG00000172500 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000133740_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133740_fitted_models.rds + jobid: 6915 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133740_fitted_models.rds + wildcards: gene=ENSG00000133740 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000165502_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165502_fitted_models.rds + jobid: 10382 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165502_fitted_models.rds + wildcards: gene=ENSG00000165502 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000133193_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133193_fitted_models.rds + jobid: 12660 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133193_fitted_models.rds + wildcards: gene=ENSG00000133193 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000172428_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172428_fitted_models.rds + jobid: 2474 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172428_fitted_models.rds + wildcards: gene=ENSG00000172428 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000157181_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000157181_fitted_models.rds + jobid: 1216 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000157181_fitted_models.rds + wildcards: gene=ENSG00000157181 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000109586_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000109586_fitted_models.rds + jobid: 3845 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000109586_fitted_models.rds + wildcards: gene=ENSG00000109586 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000224729_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000224729_fitted_models.rds + jobid: 5783 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000224729_fitted_models.rds + wildcards: gene=ENSG00000224729 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000168036_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168036_fitted_models.rds + jobid: 2658 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168036_fitted_models.rds + wildcards: gene=ENSG00000168036 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000109270_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000109270_fitted_models.rds + jobid: 3657 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000109270_fitted_models.rds + wildcards: gene=ENSG00000109270 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000107372_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107372_fitted_models.rds + jobid: 7354 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107372_fitted_models.rds + wildcards: gene=ENSG00000107372 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167705_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167705_fitted_models.rds + jobid: 11953 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167705_fitted_models.rds + wildcards: gene=ENSG00000167705 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000178177_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000178177_fitted_models.rds + jobid: 3444 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000178177_fitted_models.rds + wildcards: gene=ENSG00000178177 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164754_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164754_fitted_models.rds + jobid: 7018 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164754_fitted_models.rds + wildcards: gene=ENSG00000164754 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000147872_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147872_fitted_models.rds + jobid: 7217 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147872_fitted_models.rds + wildcards: gene=ENSG00000147872 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000173915_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173915_fitted_models.rds + jobid: 9057 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173915_fitted_models.rds + wildcards: gene=ENSG00000173915 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100442_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100442_fitted_models.rds + jobid: 10377 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100442_fitted_models.rds + wildcards: gene=ENSG00000100442 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167978_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167978_fitted_models.rds + jobid: 11316 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167978_fitted_models.rds + wildcards: gene=ENSG00000167978 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000225643_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000225643_fitted_models.rds + jobid: 263 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000225643_fitted_models.rds + wildcards: gene=ENSG00000225643 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000115875_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115875_fitted_models.rds + jobid: 1690 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115875_fitted_models.rds + wildcards: gene=ENSG00000115875 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000226419_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000226419_fitted_models.rds + jobid: 811 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000226419_fitted_models.rds + wildcards: gene=ENSG00000226419 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000101126_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101126_fitted_models.rds + jobid: 13382 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101126_fitted_models.rds + wildcards: gene=ENSG00000101126 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000108654_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108654_fitted_models.rds + jobid: 12623 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108654_fitted_models.rds + wildcards: gene=ENSG00000108654 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164329_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164329_fitted_models.rds + jobid: 4126 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164329_fitted_models.rds + wildcards: gene=ENSG00000164329 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167220_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167220_fitted_models.rds + jobid: 12966 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167220_fitted_models.rds + wildcards: gene=ENSG00000167220 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000104884_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104884_fitted_models.rds + jobid: 14281 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104884_fitted_models.rds + wildcards: gene=ENSG00000104884 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000008282_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000008282_fitted_models.rds + jobid: 5844 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000008282_fitted_models.rds + wildcards: gene=ENSG00000008282 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198932_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198932_fitted_models.rds + jobid: 6396 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198932_fitted_models.rds + wildcards: gene=ENSG00000198932 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000237819_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000237819_fitted_models.rds + jobid: 5712 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000237819_fitted_models.rds + wildcards: gene=ENSG00000237819 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000141741_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141741_fitted_models.rds + jobid: 12331 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141741_fitted_models.rds + wildcards: gene=ENSG00000141741 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:36 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000112667_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112667_fitted_models.rds + jobid: 4959 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112667_fitted_models.rds + wildcards: gene=ENSG00000112667 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000137285_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137285_fitted_models.rds + jobid: 4589 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137285_fitted_models.rds + wildcards: gene=ENSG00000137285 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000225548_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000225548_fitted_models.rds + jobid: 2602 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000225548_fitted_models.rds + wildcards: gene=ENSG00000225548 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000148950_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000148950_fitted_models.rds + jobid: 7954 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000148950_fitted_models.rds + wildcards: gene=ENSG00000148950 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100077_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100077_fitted_models.rds + jobid: 14738 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100077_fitted_models.rds + wildcards: gene=ENSG00000100077 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000145642_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145642_fitted_models.rds + jobid: 4051 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145642_fitted_models.rds + wildcards: gene=ENSG00000145642 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000157191_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000157191_fitted_models.rds + jobid: 177 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000157191_fitted_models.rds + wildcards: gene=ENSG00000157191 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000169925_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169925_fitted_models.rds + jobid: 7692 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169925_fitted_models.rds + wildcards: gene=ENSG00000169925 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000118523_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000118523_fitted_models.rds + jobid: 5227 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000118523_fitted_models.rds + wildcards: gene=ENSG00000118523 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000156052_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000156052_fitted_models.rds + jobid: 7368 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000156052_fitted_models.rds + wildcards: gene=ENSG00000156052 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000124422_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124422_fitted_models.rds + jobid: 12189 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124422_fitted_models.rds + wildcards: gene=ENSG00000124422 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000011198_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000011198_fitted_models.rds + jobid: 2673 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000011198_fitted_models.rds + wildcards: gene=ENSG00000011198 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000175265_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175265_fitted_models.rds + jobid: 10771 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175265_fitted_models.rds + wildcards: gene=ENSG00000175265 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000117419_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117419_fitted_models.rds + jobid: 498 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117419_fitted_models.rds + wildcards: gene=ENSG00000117419 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000170619_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170619_fitted_models.rds + jobid: 7166 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170619_fitted_models.rds + wildcards: gene=ENSG00000170619 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000147274_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147274_fitted_models.rds + jobid: 6531 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147274_fitted_models.rds + wildcards: gene=ENSG00000147274 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000075785_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000075785_fitted_models.rds + jobid: 3048 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000075785_fitted_models.rds + wildcards: gene=ENSG00000075785 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000113758_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113758_fitted_models.rds + jobid: 4522 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113758_fitted_models.rds + wildcards: gene=ENSG00000113758 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000136826_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136826_fitted_models.rds + jobid: 7482 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136826_fitted_models.rds + wildcards: gene=ENSG00000136826 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000214087_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000214087_fitted_models.rds + jobid: 12786 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000214087_fitted_models.rds + wildcards: gene=ENSG00000214087 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000162551_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162551_fitted_models.rds + jobid: 221 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162551_fitted_models.rds + wildcards: gene=ENSG00000162551 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000117280_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117280_fitted_models.rds + jobid: 1300 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117280_fitted_models.rds + wildcards: gene=ENSG00000117280 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000196821_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196821_fitted_models.rds + jobid: 4870 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196821_fitted_models.rds + wildcards: gene=ENSG00000196821 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000183255_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183255_fitted_models.rds + jobid: 15145 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183255_fitted_models.rds + wildcards: gene=ENSG00000183255 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000133134_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133134_fitted_models.rds + jobid: 6405 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133134_fitted_models.rds + wildcards: gene=ENSG00000133134 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000111231_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111231_fitted_models.rds + jobid: 9799 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111231_fitted_models.rds + wildcards: gene=ENSG00000111231 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000092201_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000092201_fitted_models.rds + jobid: 10257 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000092201_fitted_models.rds + wildcards: gene=ENSG00000092201 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000133597_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133597_fitted_models.rds + jobid: 5981 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133597_fitted_models.rds + wildcards: gene=ENSG00000133597 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000007062_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000007062_fitted_models.rds + jobid: 3435 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000007062_fitted_models.rds + wildcards: gene=ENSG00000007062 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000165280_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165280_fitted_models.rds + jobid: 7274 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165280_fitted_models.rds + wildcards: gene=ENSG00000165280 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000113658_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113658_fitted_models.rds + jobid: 4304 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113658_fitted_models.rds + wildcards: gene=ENSG00000113658 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000177685_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177685_fitted_models.rds + jobid: 7800 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177685_fitted_models.rds + wildcards: gene=ENSG00000177685 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000158201_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000158201_fitted_models.rds + jobid: 12897 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000158201_fitted_models.rds + wildcards: gene=ENSG00000158201 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000120949_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000120949_fitted_models.rds + jobid: 148 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000120949_fitted_models.rds + wildcards: gene=ENSG00000120949 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167081_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167081_fitted_models.rds + jobid: 7573 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167081_fitted_models.rds + wildcards: gene=ENSG00000167081 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198825_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198825_fitted_models.rds + jobid: 9119 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198825_fitted_models.rds + wildcards: gene=ENSG00000198825 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000196586_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196586_fitted_models.rds + jobid: 5052 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196586_fitted_models.rds + wildcards: gene=ENSG00000196586 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000005486_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000005486_fitted_models.rds + jobid: 5656 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000005486_fitted_models.rds + wildcards: gene=ENSG00000005486 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000160201_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160201_fitted_models.rds + jobid: 15127 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160201_fitted_models.rds + wildcards: gene=ENSG00000160201 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000004059_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000004059_fitted_models.rds + jobid: 5905 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000004059_fitted_models.rds + wildcards: gene=ENSG00000004059 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000136943_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136943_fitted_models.rds + jobid: 7441 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136943_fitted_models.rds + wildcards: gene=ENSG00000136943 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000067113_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000067113_fitted_models.rds + jobid: 4029 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000067113_fitted_models.rds + wildcards: gene=ENSG00000067113 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000119669_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119669_fitted_models.rds + jobid: 10576 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119669_fitted_models.rds + wildcards: gene=ENSG00000119669 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000004455_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000004455_fitted_models.rds + jobid: 372 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000004455_fitted_models.rds + wildcards: gene=ENSG00000004455 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000285447_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000285447_fitted_models.rds + jobid: 15198 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000285447_fitted_models.rds + wildcards: gene=ENSG00000285447 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000169900_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169900_fitted_models.rds + jobid: 11603 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169900_fitted_models.rds + wildcards: gene=ENSG00000169900 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000218739_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000218739_fitted_models.rds + jobid: 1679 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000218739_fitted_models.rds + wildcards: gene=ENSG00000218739 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000197782_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197782_fitted_models.rds + jobid: 14173 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197782_fitted_models.rds + wildcards: gene=ENSG00000197782 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000162729_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162729_fitted_models.rds + jobid: 1078 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162729_fitted_models.rds + wildcards: gene=ENSG00000162729 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000131013_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131013_fitted_models.rds + jobid: 5283 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131013_fitted_models.rds + wildcards: gene=ENSG00000131013 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000266074_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000266074_fitted_models.rds + jobid: 12777 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000266074_fitted_models.rds + wildcards: gene=ENSG00000266074 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000256463_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000256463_fitted_models.rds + jobid: 13056 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000256463_fitted_models.rds + wildcards: gene=ENSG00000256463 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000155368_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000155368_fitted_models.rds + jobid: 2040 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000155368_fitted_models.rds + wildcards: gene=ENSG00000155368 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000135336_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135336_fitted_models.rds + jobid: 5087 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135336_fitted_models.rds + wildcards: gene=ENSG00000135336 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000115307_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115307_fitted_models.rds + jobid: 1870 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115307_fitted_models.rds + wildcards: gene=ENSG00000115307 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000148303_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000148303_fitted_models.rds + jobid: 7680 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000148303_fitted_models.rds + wildcards: gene=ENSG00000148303 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000106462_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106462_fitted_models.rds + jobid: 6014 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106462_fitted_models.rds + wildcards: gene=ENSG00000106462 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000145425_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145425_fitted_models.rds + jobid: 3792 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145425_fitted_models.rds + wildcards: gene=ENSG00000145425 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000171867_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171867_fitted_models.rds + jobid: 13126 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171867_fitted_models.rds + wildcards: gene=ENSG00000171867 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000271576_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000271576_fitted_models.rds + jobid: 663 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000271576_fitted_models.rds + wildcards: gene=ENSG00000271576 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000155506_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000155506_fitted_models.rds + jobid: 4434 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000155506_fitted_models.rds + wildcards: gene=ENSG00000155506 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000187840_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000187840_fitted_models.rds + jobid: 6770 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000187840_fitted_models.rds + wildcards: gene=ENSG00000187840 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000214530_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000214530_fitted_models.rds + jobid: 8317 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000214530_fitted_models.rds + wildcards: gene=ENSG00000214530 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000186340_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000186340_fitted_models.rds + jobid: 5347 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000186340_fitted_models.rds + wildcards: gene=ENSG00000186340 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000136942_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136942_fitted_models.rds + jobid: 7564 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136942_fitted_models.rds + wildcards: gene=ENSG00000136942 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000150779_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000150779_fitted_models.rds + jobid: 8473 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000150779_fitted_models.rds + wildcards: gene=ENSG00000150779 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000174021_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000174021_fitted_models.rds + jobid: 667 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000174021_fitted_models.rds + wildcards: gene=ENSG00000174021 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000102144_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102144_fitted_models.rds + jobid: 6353 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102144_fitted_models.rds + wildcards: gene=ENSG00000102144 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000074657_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000074657_fitted_models.rds + jobid: 13009 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000074657_fitted_models.rds + wildcards: gene=ENSG00000074657 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000121774_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000121774_fitted_models.rds + jobid: 346 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000121774_fitted_models.rds + wildcards: gene=ENSG00000121774 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000165629_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165629_fitted_models.rds + jobid: 8634 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165629_fitted_models.rds + wildcards: gene=ENSG00000165629 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000064545_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000064545_fitted_models.rds + jobid: 13937 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000064545_fitted_models.rds + wildcards: gene=ENSG00000064545 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000165895_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165895_fitted_models.rds + jobid: 8424 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165895_fitted_models.rds + wildcards: gene=ENSG00000165895 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167460_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167460_fitted_models.rds + jobid: 13857 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167460_fitted_models.rds + wildcards: gene=ENSG00000167460 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000160199_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160199_fitted_models.rds + jobid: 15125 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160199_fitted_models.rds + wildcards: gene=ENSG00000160199 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198561_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198561_fitted_models.rds + jobid: 8052 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198561_fitted_models.rds + wildcards: gene=ENSG00000198561 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000136003_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136003_fitted_models.rds + jobid: 9777 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136003_fitted_models.rds + wildcards: gene=ENSG00000136003 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000089685_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000089685_fitted_models.rds + jobid: 12742 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000089685_fitted_models.rds + wildcards: gene=ENSG00000089685 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000169490_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169490_fitted_models.rds + jobid: 6783 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169490_fitted_models.rds + wildcards: gene=ENSG00000169490 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198692_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198692_fitted_models.rds + jobid: 14634 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198692_fitted_models.rds + wildcards: gene=ENSG00000198692 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000131236_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131236_fitted_models.rds + jobid: 440 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131236_fitted_models.rds + wildcards: gene=ENSG00000131236 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000178922_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000178922_fitted_models.rds + jobid: 484 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000178922_fitted_models.rds + wildcards: gene=ENSG00000178922 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000137073_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137073_fitted_models.rds + jobid: 7256 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137073_fitted_models.rds + wildcards: gene=ENSG00000137073 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000111196_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111196_fitted_models.rds + jobid: 9292 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111196_fitted_models.rds + wildcards: gene=ENSG00000111196 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000129562_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000129562_fitted_models.rds + jobid: 10264 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000129562_fitted_models.rds + wildcards: gene=ENSG00000129562 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000148335_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000148335_fitted_models.rds + jobid: 7639 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000148335_fitted_models.rds + wildcards: gene=ENSG00000148335 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000104904_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104904_fitted_models.rds + jobid: 13550 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104904_fitted_models.rds + wildcards: gene=ENSG00000104904 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000213420_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000213420_fitted_models.rds + jobid: 5769 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000213420_fitted_models.rds + wildcards: gene=ENSG00000213420 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000105136_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105136_fitted_models.rds + jobid: 14570 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105136_fitted_models.rds + wildcards: gene=ENSG00000105136 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000070087_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000070087_fitted_models.rds + jobid: 3144 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000070087_fitted_models.rds + wildcards: gene=ENSG00000070087 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000173020_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173020_fitted_models.rds + jobid: 8257 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173020_fitted_models.rds + wildcards: gene=ENSG00000173020 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000143845_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143845_fitted_models.rds + jobid: 1278 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143845_fitted_models.rds + wildcards: gene=ENSG00000143845 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100596_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100596_fitted_models.rds + jobid: 10587 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100596_fitted_models.rds + wildcards: gene=ENSG00000100596 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000155380_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000155380_fitted_models.rds + jobid: 810 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000155380_fitted_models.rds + wildcards: gene=ENSG00000155380 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000185361_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185361_fitted_models.rds + jobid: 13610 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185361_fitted_models.rds + wildcards: gene=ENSG00000185361 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000147687_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147687_fitted_models.rds + jobid: 7050 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147687_fitted_models.rds + wildcards: gene=ENSG00000147687 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000188529_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188529_fitted_models.rds + jobid: 249 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188529_fitted_models.rds + wildcards: gene=ENSG00000188529 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000146872_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000146872_fitted_models.rds + jobid: 12597 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000146872_fitted_models.rds + wildcards: gene=ENSG00000146872 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000184990_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184990_fitted_models.rds + jobid: 10711 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184990_fitted_models.rds + wildcards: gene=ENSG00000184990 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000169020_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169020_fitted_models.rds + jobid: 3345 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169020_fitted_models.rds + wildcards: gene=ENSG00000169020 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000178209_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000178209_fitted_models.rds + jobid: 7127 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000178209_fitted_models.rds + wildcards: gene=ENSG00000178209 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000184697_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184697_fitted_models.rds + jobid: 11329 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184697_fitted_models.rds + wildcards: gene=ENSG00000184697 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000108671_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108671_fitted_models.rds + jobid: 12266 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108671_fitted_models.rds + wildcards: gene=ENSG00000108671 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000112110_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112110_fitted_models.rds + jobid: 5325 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112110_fitted_models.rds + wildcards: gene=ENSG00000112110 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164924_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164924_fitted_models.rds + jobid: 6984 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164924_fitted_models.rds + wildcards: gene=ENSG00000164924 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000089280_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000089280_fitted_models.rds + jobid: 11599 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000089280_fitted_models.rds + wildcards: gene=ENSG00000089280 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000124226_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124226_fitted_models.rds + jobid: 13371 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124226_fitted_models.rds + wildcards: gene=ENSG00000124226 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000090470_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000090470_fitted_models.rds + jobid: 10973 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000090470_fitted_models.rds + wildcards: gene=ENSG00000090470 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000140534_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140534_fitted_models.rds + jobid: 11154 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140534_fitted_models.rds + wildcards: gene=ENSG00000140534 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000254377_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000254377_fitted_models.rds + jobid: 6847 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000254377_fitted_models.rds + wildcards: gene=ENSG00000254377 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000104517_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104517_fitted_models.rds + jobid: 6991 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104517_fitted_models.rds + wildcards: gene=ENSG00000104517 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000173660_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173660_fitted_models.rds + jobid: 529 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173660_fitted_models.rds + wildcards: gene=ENSG00000173660 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000111775_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111775_fitted_models.rds + jobid: 9869 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111775_fitted_models.rds + wildcards: gene=ENSG00000111775 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000237058_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000237058_fitted_models.rds + jobid: 62 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000237058_fitted_models.rds + wildcards: gene=ENSG00000237058 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000121741_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000121741_fitted_models.rds + jobid: 9979 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000121741_fitted_models.rds + wildcards: gene=ENSG00000121741 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000197694_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197694_fitted_models.rds + jobid: 7616 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197694_fitted_models.rds + wildcards: gene=ENSG00000197694 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000017797_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000017797_fitted_models.rds + jobid: 12869 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000017797_fitted_models.rds + wildcards: gene=ENSG00000017797 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163879_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163879_fitted_models.rds + jobid: 413 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163879_fitted_models.rds + wildcards: gene=ENSG00000163879 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000188026_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188026_fitted_models.rds + jobid: 9925 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188026_fitted_models.rds + wildcards: gene=ENSG00000188026 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000072310_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000072310_fitted_models.rds + jobid: 12158 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000072310_fitted_models.rds + wildcards: gene=ENSG00000072310 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100142_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100142_fitted_models.rds + jobid: 14851 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100142_fitted_models.rds + wildcards: gene=ENSG00000100142 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000107789_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107789_fitted_models.rds + jobid: 8920 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107789_fitted_models.rds + wildcards: gene=ENSG00000107789 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000106633_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106633_fitted_models.rds + jobid: 5556 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106633_fitted_models.rds + wildcards: gene=ENSG00000106633 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000145908_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145908_fitted_models.rds + jobid: 4420 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145908_fitted_models.rds + wildcards: gene=ENSG00000145908 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000134287_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134287_fitted_models.rds + jobid: 9441 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134287_fitted_models.rds + wildcards: gene=ENSG00000134287 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198722_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198722_fitted_models.rds + jobid: 7279 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198722_fitted_models.rds + wildcards: gene=ENSG00000198722 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000162433_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162433_fitted_models.rds + jobid: 615 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162433_fitted_models.rds + wildcards: gene=ENSG00000162433 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000157106_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000157106_fitted_models.rds + jobid: 11443 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000157106_fitted_models.rds + wildcards: gene=ENSG00000157106 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000139180_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000139180_fitted_models.rds + jobid: 9219 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000139180_fitted_models.rds + wildcards: gene=ENSG00000139180 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000088986_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000088986_fitted_models.rds + jobid: 9873 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000088986_fitted_models.rds + wildcards: gene=ENSG00000088986 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000170633_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170633_fitted_models.rds + jobid: 9888 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170633_fitted_models.rds + wildcards: gene=ENSG00000170633 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000141698_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141698_fitted_models.rds + jobid: 12359 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141698_fitted_models.rds + wildcards: gene=ENSG00000141698 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000090238_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000090238_fitted_models.rds + jobid: 11550 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000090238_fitted_models.rds + wildcards: gene=ENSG00000090238 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000221869_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000221869_fitted_models.rds + jobid: 6808 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000221869_fitted_models.rds + wildcards: gene=ENSG00000221869 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000166478_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166478_fitted_models.rds + jobid: 7875 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166478_fitted_models.rds + wildcards: gene=ENSG00000166478 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000197879_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197879_fitted_models.rds + jobid: 11947 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197879_fitted_models.rds + wildcards: gene=ENSG00000197879 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000102030_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102030_fitted_models.rds + jobid: 6578 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102030_fitted_models.rds + wildcards: gene=ENSG00000102030 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000156381_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000156381_fitted_models.rds + jobid: 10687 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000156381_fitted_models.rds + wildcards: gene=ENSG00000156381 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000124610_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124610_fitted_models.rds + jobid: 4672 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124610_fitted_models.rds + wildcards: gene=ENSG00000124610 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000182165_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182165_fitted_models.rds + jobid: 5687 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182165_fitted_models.rds + wildcards: gene=ENSG00000182165 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000108961_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108961_fitted_models.rds + jobid: 12098 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108961_fitted_models.rds + wildcards: gene=ENSG00000108961 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000114859_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114859_fitted_models.rds + jobid: 3257 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114859_fitted_models.rds + wildcards: gene=ENSG00000114859 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000120756_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000120756_fitted_models.rds + jobid: 3121 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000120756_fitted_models.rds + wildcards: gene=ENSG00000120756 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000134294_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134294_fitted_models.rds + jobid: 9413 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134294_fitted_models.rds + wildcards: gene=ENSG00000134294 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000160200_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160200_fitted_models.rds + jobid: 15126 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160200_fitted_models.rds + wildcards: gene=ENSG00000160200 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000136068_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136068_fitted_models.rds + jobid: 2857 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136068_fitted_models.rds + wildcards: gene=ENSG00000136068 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000142632_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142632_fitted_models.rds + jobid: 173 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142632_fitted_models.rds + wildcards: gene=ENSG00000142632 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000073712_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000073712_fitted_models.rds + jobid: 10417 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000073712_fitted_models.rds + wildcards: gene=ENSG00000073712 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000127774_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000127774_fitted_models.rds + jobid: 11978 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000127774_fitted_models.rds + wildcards: gene=ENSG00000127774 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000160439_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160439_fitted_models.rds + jobid: 14510 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160439_fitted_models.rds + wildcards: gene=ENSG00000160439 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000117318_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117318_fitted_models.rds + jobid: 239 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117318_fitted_models.rds + wildcards: gene=ENSG00000117318 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000074935_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000074935_fitted_models.rds + jobid: 5168 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000074935_fitted_models.rds + wildcards: gene=ENSG00000074935 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000170759_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170759_fitted_models.rds + jobid: 8720 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170759_fitted_models.rds + wildcards: gene=ENSG00000170759 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100075_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100075_fitted_models.rds + jobid: 14657 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100075_fitted_models.rds + wildcards: gene=ENSG00000100075 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164008_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164008_fitted_models.rds + jobid: 467 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164008_fitted_models.rds + wildcards: gene=ENSG00000164008 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000003249_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000003249_fitted_models.rds + jobid: 11930 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000003249_fitted_models.rds + wildcards: gene=ENSG00000003249 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000068028_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000068028_fitted_models.rds + jobid: 2785 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000068028_fitted_models.rds + wildcards: gene=ENSG00000068028 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000136098_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136098_fitted_models.rds + jobid: 10131 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136098_fitted_models.rds + wildcards: gene=ENSG00000136098 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000036257_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000036257_fitted_models.rds + jobid: 2410 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000036257_fitted_models.rds + wildcards: gene=ENSG00000036257 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000166582_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166582_fitted_models.rds + jobid: 12139 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166582_fitted_models.rds + wildcards: gene=ENSG00000166582 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000130726_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130726_fitted_models.rds + jobid: 14615 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130726_fitted_models.rds + wildcards: gene=ENSG00000130726 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000182759_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182759_fitted_models.rds + jobid: 7108 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182759_fitted_models.rds + wildcards: gene=ENSG00000182759 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000182481_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182481_fitted_models.rds + jobid: 12641 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182481_fitted_models.rds + wildcards: gene=ENSG00000182481 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000128039_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128039_fitted_models.rds + jobid: 3526 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128039_fitted_models.rds + wildcards: gene=ENSG00000128039 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198380_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198380_fitted_models.rds + jobid: 1812 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198380_fitted_models.rds + wildcards: gene=ENSG00000198380 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000068697_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000068697_fitted_models.rds + jobid: 1579 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000068697_fitted_models.rds + wildcards: gene=ENSG00000068697 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000173068_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173068_fitted_models.rds + jobid: 7210 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173068_fitted_models.rds + wildcards: gene=ENSG00000173068 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000206573_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000206573_fitted_models.rds + jobid: 2513 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000206573_fitted_models.rds + wildcards: gene=ENSG00000206573 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000132581_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132581_fitted_models.rds + jobid: 12217 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132581_fitted_models.rds + wildcards: gene=ENSG00000132581 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000244038_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000244038_fitted_models.rds + jobid: 214 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000244038_fitted_models.rds + wildcards: gene=ENSG00000244038 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:37 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000189079_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000189079_fitted_models.rds + jobid: 9410 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000189079_fitted_models.rds + wildcards: gene=ENSG00000189079 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000165637_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165637_fitted_models.rds + jobid: 8881 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165637_fitted_models.rds + wildcards: gene=ENSG00000165637 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000165795_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165795_fitted_models.rds + jobid: 10252 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165795_fitted_models.rds + wildcards: gene=ENSG00000165795 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000171208_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171208_fitted_models.rds + jobid: 11622 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171208_fitted_models.rds + wildcards: gene=ENSG00000171208 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000168710_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168710_fitted_models.rds + jobid: 779 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168710_fitted_models.rds + wildcards: gene=ENSG00000168710 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000102316_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102316_fitted_models.rds + jobid: 6272 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102316_fitted_models.rds + wildcards: gene=ENSG00000102316 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000131828_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131828_fitted_models.rds + jobid: 6143 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131828_fitted_models.rds + wildcards: gene=ENSG00000131828 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000066117_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000066117_fitted_models.rds + jobid: 9464 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000066117_fitted_models.rds + wildcards: gene=ENSG00000066117 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167862_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167862_fitted_models.rds + jobid: 12677 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167862_fitted_models.rds + wildcards: gene=ENSG00000167862 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000160963_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160963_fitted_models.rds + jobid: 5814 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160963_fitted_models.rds + wildcards: gene=ENSG00000160963 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000142156_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142156_fitted_models.rds + jobid: 15158 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142156_fitted_models.rds + wildcards: gene=ENSG00000142156 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000036054_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000036054_fitted_models.rds + jobid: 2927 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000036054_fitted_models.rds + wildcards: gene=ENSG00000036054 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000170175_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170175_fitted_models.rds + jobid: 12062 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170175_fitted_models.rds + wildcards: gene=ENSG00000170175 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000183283_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183283_fitted_models.rds + jobid: 9478 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183283_fitted_models.rds + wildcards: gene=ENSG00000183283 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000197451_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197451_fitted_models.rds + jobid: 4534 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197451_fitted_models.rds + wildcards: gene=ENSG00000197451 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167283_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167283_fitted_models.rds + jobid: 8507 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167283_fitted_models.rds + wildcards: gene=ENSG00000167283 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000107796_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107796_fitted_models.rds + jobid: 8926 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107796_fitted_models.rds + wildcards: gene=ENSG00000107796 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164651_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164651_fitted_models.rds + jobid: 5454 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164651_fitted_models.rds + wildcards: gene=ENSG00000164651 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000137269_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137269_fitted_models.rds + jobid: 5012 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137269_fitted_models.rds + wildcards: gene=ENSG00000137269 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000088179_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000088179_fitted_models.rds + jobid: 2043 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000088179_fitted_models.rds + wildcards: gene=ENSG00000088179 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000197329_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197329_fitted_models.rds + jobid: 1788 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197329_fitted_models.rds + wildcards: gene=ENSG00000197329 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000242516_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000242516_fitted_models.rds + jobid: 2900 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000242516_fitted_models.rds + wildcards: gene=ENSG00000242516 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000153485_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153485_fitted_models.rds + jobid: 10631 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153485_fitted_models.rds + wildcards: gene=ENSG00000153485 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000131037_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131037_fitted_models.rds + jobid: 14511 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131037_fitted_models.rds + wildcards: gene=ENSG00000131037 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000131368_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131368_fitted_models.rds + jobid: 2566 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131368_fitted_models.rds + wildcards: gene=ENSG00000131368 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000113328_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113328_fitted_models.rds + jobid: 4457 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113328_fitted_models.rds + wildcards: gene=ENSG00000113328 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000173141_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173141_fitted_models.rds + jobid: 9990 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173141_fitted_models.rds + wildcards: gene=ENSG00000173141 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000162642_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162642_fitted_models.rds + jobid: 674 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162642_fitted_models.rds + wildcards: gene=ENSG00000162642 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000089022_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000089022_fitted_models.rds + jobid: 9816 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000089022_fitted_models.rds + wildcards: gene=ENSG00000089022 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000103160_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000103160_fitted_models.rds + jobid: 11861 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000103160_fitted_models.rds + wildcards: gene=ENSG00000103160 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000040633_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000040633_fitted_models.rds + jobid: 12045 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000040633_fitted_models.rds + wildcards: gene=ENSG00000040633 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000107263_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107263_fitted_models.rds + jobid: 7665 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107263_fitted_models.rds + wildcards: gene=ENSG00000107263 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000077235_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000077235_fitted_models.rds + jobid: 11501 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000077235_fitted_models.rds + wildcards: gene=ENSG00000077235 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000183648_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183648_fitted_models.rds + jobid: 10622 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183648_fitted_models.rds + wildcards: gene=ENSG00000183648 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000184809_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184809_fitted_models.rds + jobid: 15105 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184809_fitted_models.rds + wildcards: gene=ENSG00000184809 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000153037_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153037_fitted_models.rds + jobid: 4214 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153037_fitted_models.rds + wildcards: gene=ENSG00000153037 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000151090_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000151090_fitted_models.rds + jobid: 2596 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000151090_fitted_models.rds + wildcards: gene=ENSG00000151090 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000070961_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000070961_fitted_models.rds + jobid: 9698 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000070961_fitted_models.rds + wildcards: gene=ENSG00000070961 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000132603_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132603_fitted_models.rds + jobid: 11776 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132603_fitted_models.rds + wildcards: gene=ENSG00000132603 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000143434_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143434_fitted_models.rds + jobid: 936 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143434_fitted_models.rds + wildcards: gene=ENSG00000143434 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000105939_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105939_fitted_models.rds + jobid: 5965 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105939_fitted_models.rds + wildcards: gene=ENSG00000105939 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000182362_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182362_fitted_models.rds + jobid: 15166 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182362_fitted_models.rds + wildcards: gene=ENSG00000182362 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000204623_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204623_fitted_models.rds + jobid: 4751 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204623_fitted_models.rds + wildcards: gene=ENSG00000204623 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000058262_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000058262_fitted_models.rds + jobid: 3044 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000058262_fitted_models.rds + wildcards: gene=ENSG00000058262 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163738_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163738_fitted_models.rds + jobid: 3569 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163738_fitted_models.rds + wildcards: gene=ENSG00000163738 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000196591_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196591_fitted_models.rds + jobid: 5172 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196591_fitted_models.rds + wildcards: gene=ENSG00000196591 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000119650_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119650_fitted_models.rds + jobid: 10571 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119650_fitted_models.rds + wildcards: gene=ENSG00000119650 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000125520_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125520_fitted_models.rds + jobid: 13458 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125520_fitted_models.rds + wildcards: gene=ENSG00000125520 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000138767_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138767_fitted_models.rds + jobid: 3587 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138767_fitted_models.rds + wildcards: gene=ENSG00000138767 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000111206_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111206_fitted_models.rds + jobid: 9201 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111206_fitted_models.rds + wildcards: gene=ENSG00000111206 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167645_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167645_fitted_models.rds + jobid: 14125 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167645_fitted_models.rds + wildcards: gene=ENSG00000167645 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000176171_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176171_fitted_models.rds + jobid: 9162 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176171_fitted_models.rds + wildcards: gene=ENSG00000176171 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000266402_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000266402_fitted_models.rds + jobid: 12620 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000266402_fitted_models.rds + wildcards: gene=ENSG00000266402 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000101470_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101470_fitted_models.rds + jobid: 13334 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101470_fitted_models.rds + wildcards: gene=ENSG00000101470 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000005249_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000005249_fitted_models.rds + jobid: 5848 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000005249_fitted_models.rds + wildcards: gene=ENSG00000005249 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000222041_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000222041_fitted_models.rds + jobid: 1914 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000222041_fitted_models.rds + wildcards: gene=ENSG00000222041 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000237765_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000237765_fitted_models.rds + jobid: 3433 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000237765_fitted_models.rds + wildcards: gene=ENSG00000237765 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000105605_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105605_fitted_models.rds + jobid: 14490 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105605_fitted_models.rds + wildcards: gene=ENSG00000105605 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000128294_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128294_fitted_models.rds + jobid: 14744 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128294_fitted_models.rds + wildcards: gene=ENSG00000128294 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000136888_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136888_fitted_models.rds + jobid: 7527 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136888_fitted_models.rds + wildcards: gene=ENSG00000136888 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000120438_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000120438_fitted_models.rds + jobid: 5324 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000120438_fitted_models.rds + wildcards: gene=ENSG00000120438 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000107223_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107223_fitted_models.rds + jobid: 7726 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107223_fitted_models.rds + wildcards: gene=ENSG00000107223 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000099624_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099624_fitted_models.rds + jobid: 13512 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099624_fitted_models.rds + wildcards: gene=ENSG00000099624 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000104979_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104979_fitted_models.rds + jobid: 13822 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104979_fitted_models.rds + wildcards: gene=ENSG00000104979 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000067248_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000067248_fitted_models.rds + jobid: 4027 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000067248_fitted_models.rds + wildcards: gene=ENSG00000067248 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000162910_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162910_fitted_models.rds + jobid: 1411 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162910_fitted_models.rds + wildcards: gene=ENSG00000162910 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000217930_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000217930_fitted_models.rds + jobid: 11360 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000217930_fitted_models.rds + wildcards: gene=ENSG00000217930 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000186298_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000186298_fitted_models.rds + jobid: 9805 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000186298_fitted_models.rds + wildcards: gene=ENSG00000186298 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000226067_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000226067_fitted_models.rds + jobid: 853 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000226067_fitted_models.rds + wildcards: gene=ENSG00000226067 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000162493_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162493_fitted_models.rds + jobid: 152 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162493_fitted_models.rds + wildcards: gene=ENSG00000162493 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000049860_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000049860_fitted_models.rds + jobid: 4099 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000049860_fitted_models.rds + wildcards: gene=ENSG00000049860 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000187391_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000187391_fitted_models.rds + jobid: 5675 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000187391_fitted_models.rds + wildcards: gene=ENSG00000187391 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000127922_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000127922_fitted_models.rds + jobid: 5727 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000127922_fitted_models.rds + wildcards: gene=ENSG00000127922 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000169100_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169100_fitted_models.rds + jobid: 6082 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169100_fitted_models.rds + wildcards: gene=ENSG00000169100 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000174851_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000174851_fitted_models.rds + jobid: 8226 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000174851_fitted_models.rds + wildcards: gene=ENSG00000174851 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000177106_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177106_fitted_models.rds + jobid: 7789 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177106_fitted_models.rds + wildcards: gene=ENSG00000177106 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000150540_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000150540_fitted_models.rds + jobid: 2097 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000150540_fitted_models.rds + wildcards: gene=ENSG00000150540 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000136104_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136104_fitted_models.rds + jobid: 10118 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136104_fitted_models.rds + wildcards: gene=ENSG00000136104 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000136938_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136938_fitted_models.rds + jobid: 7450 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136938_fitted_models.rds + wildcards: gene=ENSG00000136938 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000179295_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179295_fitted_models.rds + jobid: 9823 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179295_fitted_models.rds + wildcards: gene=ENSG00000179295 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000135097_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135097_fitted_models.rds + jobid: 9868 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135097_fitted_models.rds + wildcards: gene=ENSG00000135097 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163041_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163041_fitted_models.rds + jobid: 1395 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163041_fitted_models.rds + wildcards: gene=ENSG00000163041 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000086061_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000086061_fitted_models.rds + jobid: 7244 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000086061_fitted_models.rds + wildcards: gene=ENSG00000086061 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000142657_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142657_fitted_models.rds + jobid: 121 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142657_fitted_models.rds + wildcards: gene=ENSG00000142657 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000070031_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000070031_fitted_models.rds + jobid: 7786 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000070031_fitted_models.rds + wildcards: gene=ENSG00000070031 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000176834_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176834_fitted_models.rds + jobid: 9850 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176834_fitted_models.rds + wildcards: gene=ENSG00000176834 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000154096_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000154096_fitted_models.rds + jobid: 8536 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000154096_fitted_models.rds + wildcards: gene=ENSG00000154096 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000183741_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183741_fitted_models.rds + jobid: 14873 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183741_fitted_models.rds + wildcards: gene=ENSG00000183741 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000153048_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153048_fitted_models.rds + jobid: 11388 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153048_fitted_models.rds + wildcards: gene=ENSG00000153048 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000111276_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111276_fitted_models.rds + jobid: 9312 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111276_fitted_models.rds + wildcards: gene=ENSG00000111276 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000188647_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188647_fitted_models.rds + jobid: 7343 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188647_fitted_models.rds + wildcards: gene=ENSG00000188647 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000155542_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000155542_fitted_models.rds + jobid: 4034 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000155542_fitted_models.rds + wildcards: gene=ENSG00000155542 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000186104_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000186104_fitted_models.rds + jobid: 7904 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000186104_fitted_models.rds + wildcards: gene=ENSG00000186104 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000127152_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000127152_fitted_models.rds + jobid: 10661 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000127152_fitted_models.rds + wildcards: gene=ENSG00000127152 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000187051_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000187051_fitted_models.rds + jobid: 14888 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000187051_fitted_models.rds + wildcards: gene=ENSG00000187051 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000073849_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000073849_fitted_models.rds + jobid: 3278 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000073849_fitted_models.rds + wildcards: gene=ENSG00000073849 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000138764_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138764_fitted_models.rds + jobid: 3586 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138764_fitted_models.rds + wildcards: gene=ENSG00000138764 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000090621_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000090621_fitted_models.rds + jobid: 434 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000090621_fitted_models.rds + wildcards: gene=ENSG00000090621 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000113742_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113742_fitted_models.rds + jobid: 4489 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113742_fitted_models.rds + wildcards: gene=ENSG00000113742 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000041357_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000041357_fitted_models.rds + jobid: 11094 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000041357_fitted_models.rds + wildcards: gene=ENSG00000041357 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000269404_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000269404_fitted_models.rds + jobid: 14422 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000269404_fitted_models.rds + wildcards: gene=ENSG00000269404 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000112796_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112796_fitted_models.rds + jobid: 4990 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112796_fitted_models.rds + wildcards: gene=ENSG00000112796 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000135111_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135111_fitted_models.rds + jobid: 9837 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135111_fitted_models.rds + wildcards: gene=ENSG00000135111 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000103742_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000103742_fitted_models.rds + jobid: 10977 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000103742_fitted_models.rds + wildcards: gene=ENSG00000103742 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000187957_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000187957_fitted_models.rds + jobid: 2418 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000187957_fitted_models.rds + wildcards: gene=ENSG00000187957 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167088_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167088_fitted_models.rds + jobid: 12896 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167088_fitted_models.rds + wildcards: gene=ENSG00000167088 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000142538_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142538_fitted_models.rds + jobid: 14383 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142538_fitted_models.rds + wildcards: gene=ENSG00000142538 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000083857_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000083857_fitted_models.rds + jobid: 3892 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000083857_fitted_models.rds + wildcards: gene=ENSG00000083857 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000130204_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130204_fitted_models.rds + jobid: 14267 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130204_fitted_models.rds + wildcards: gene=ENSG00000130204 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000161980_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000161980_fitted_models.rds + jobid: 11211 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000161980_fitted_models.rds + wildcards: gene=ENSG00000161980 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000176986_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176986_fitted_models.rds + jobid: 8868 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176986_fitted_models.rds + wildcards: gene=ENSG00000176986 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000138814_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138814_fitted_models.rds + jobid: 3661 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138814_fitted_models.rds + wildcards: gene=ENSG00000138814 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000006606_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000006606_fitted_models.rds + jobid: 5655 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000006606_fitted_models.rds + wildcards: gene=ENSG00000006606 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000136231_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136231_fitted_models.rds + jobid: 5468 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136231_fitted_models.rds + wildcards: gene=ENSG00000136231 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198729_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198729_fitted_models.rds + jobid: 5290 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198729_fitted_models.rds + wildcards: gene=ENSG00000198729 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000278311_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000278311_fitted_models.rds + jobid: 12291 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000278311_fitted_models.rds + wildcards: gene=ENSG00000278311 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000149541_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000149541_fitted_models.rds + jobid: 8101 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000149541_fitted_models.rds + wildcards: gene=ENSG00000149541 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000144136_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000144136_fitted_models.rds + jobid: 2021 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000144136_fitted_models.rds + wildcards: gene=ENSG00000144136 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000050130_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000050130_fitted_models.rds + jobid: 10454 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000050130_fitted_models.rds + wildcards: gene=ENSG00000050130 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163956_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163956_fitted_models.rds + jobid: 3390 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163956_fitted_models.rds + wildcards: gene=ENSG00000163956 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000196189_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196189_fitted_models.rds + jobid: 1040 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196189_fitted_models.rds + wildcards: gene=ENSG00000196189 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000027869_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000027869_fitted_models.rds + jobid: 1066 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000027869_fitted_models.rds + wildcards: gene=ENSG00000027869 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198910_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198910_fitted_models.rds + jobid: 6576 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198910_fitted_models.rds + wildcards: gene=ENSG00000198910 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000080709_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000080709_fitted_models.rds + jobid: 4219 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000080709_fitted_models.rds + wildcards: gene=ENSG00000080709 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000109775_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000109775_fitted_models.rds + jobid: 3882 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000109775_fitted_models.rds + wildcards: gene=ENSG00000109775 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000177410_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177410_fitted_models.rds + jobid: 13365 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177410_fitted_models.rds + wildcards: gene=ENSG00000177410 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000174891_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000174891_fitted_models.rds + jobid: 3174 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000174891_fitted_models.rds + wildcards: gene=ENSG00000174891 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000088298_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000088298_fitted_models.rds + jobid: 13248 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000088298_fitted_models.rds + wildcards: gene=ENSG00000088298 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000187961_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000187961_fitted_models.rds + jobid: 8 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000187961_fitted_models.rds + wildcards: gene=ENSG00000187961 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000155438_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000155438_fitted_models.rds + jobid: 2051 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000155438_fitted_models.rds + wildcards: gene=ENSG00000155438 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000136141_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136141_fitted_models.rds + jobid: 10091 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136141_fitted_models.rds + wildcards: gene=ENSG00000136141 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000173575_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173575_fitted_models.rds + jobid: 11185 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173575_fitted_models.rds + wildcards: gene=ENSG00000173575 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000160691_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160691_fitted_models.rds + jobid: 998 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160691_fitted_models.rds + wildcards: gene=ENSG00000160691 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164211_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164211_fitted_models.rds + jobid: 4208 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164211_fitted_models.rds + wildcards: gene=ENSG00000164211 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000160221_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160221_fitted_models.rds + jobid: 15136 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160221_fitted_models.rds + wildcards: gene=ENSG00000160221 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000095139_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000095139_fitted_models.rds + jobid: 8511 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000095139_fitted_models.rds + wildcards: gene=ENSG00000095139 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000143933_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143933_fitted_models.rds + jobid: 1730 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143933_fitted_models.rds + wildcards: gene=ENSG00000143933 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000144401_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000144401_fitted_models.rds + jobid: 2325 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000144401_fitted_models.rds + wildcards: gene=ENSG00000144401 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000105088_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105088_fitted_models.rds + jobid: 13706 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105088_fitted_models.rds + wildcards: gene=ENSG00000105088 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000227057_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000227057_fitted_models.rds + jobid: 4850 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000227057_fitted_models.rds + wildcards: gene=ENSG00000227057 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000171490_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171490_fitted_models.rds + jobid: 11409 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171490_fitted_models.rds + wildcards: gene=ENSG00000171490 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000162878_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162878_fitted_models.rds + jobid: 1702 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162878_fitted_models.rds + wildcards: gene=ENSG00000162878 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000277200_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000277200_fitted_models.rds + jobid: 11971 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000277200_fitted_models.rds + wildcards: gene=ENSG00000277200 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000108840_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108840_fitted_models.rds + jobid: 12422 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108840_fitted_models.rds + wildcards: gene=ENSG00000108840 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000116863_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116863_fitted_models.rds + jobid: 397 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116863_fitted_models.rds + wildcards: gene=ENSG00000116863 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000254093_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000254093_fitted_models.rds + jobid: 6646 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000254093_fitted_models.rds + wildcards: gene=ENSG00000254093 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000091527_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000091527_fitted_models.rds + jobid: 3077 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000091527_fitted_models.rds + wildcards: gene=ENSG00000091527 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000149100_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000149100_fitted_models.rds + jobid: 7958 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000149100_fitted_models.rds + wildcards: gene=ENSG00000149100 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000272047_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000272047_fitted_models.rds + jobid: 5314 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000272047_fitted_models.rds + wildcards: gene=ENSG00000272047 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000182095_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182095_fitted_models.rds + jobid: 5401 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182095_fitted_models.rds + wildcards: gene=ENSG00000182095 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000132432_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132432_fitted_models.rds + jobid: 5582 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132432_fitted_models.rds + wildcards: gene=ENSG00000132432 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000153956_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153956_fitted_models.rds + jobid: 5677 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153956_fitted_models.rds + wildcards: gene=ENSG00000153956 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000196570_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196570_fitted_models.rds + jobid: 4517 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196570_fitted_models.rds + wildcards: gene=ENSG00000196570 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000153989_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153989_fitted_models.rds + jobid: 5188 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153989_fitted_models.rds + wildcards: gene=ENSG00000153989 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000105251_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105251_fitted_models.rds + jobid: 13597 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105251_fitted_models.rds + wildcards: gene=ENSG00000105251 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000133107_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133107_fitted_models.rds + jobid: 10051 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133107_fitted_models.rds + wildcards: gene=ENSG00000133107 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000197620_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197620_fitted_models.rds + jobid: 6544 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197620_fitted_models.rds + wildcards: gene=ENSG00000197620 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000168653_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168653_fitted_models.rds + jobid: 431 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168653_fitted_models.rds + wildcards: gene=ENSG00000168653 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000278053_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000278053_fitted_models.rds + jobid: 12302 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000278053_fitted_models.rds + wildcards: gene=ENSG00000278053 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000130725_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130725_fitted_models.rds + jobid: 14617 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130725_fitted_models.rds + wildcards: gene=ENSG00000130725 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000175928_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175928_fitted_models.rds + jobid: 2501 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175928_fitted_models.rds + wildcards: gene=ENSG00000175928 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000158769_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000158769_fitted_models.rds + jobid: 1088 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000158769_fitted_models.rds + wildcards: gene=ENSG00000158769 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000137563_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137563_fitted_models.rds + jobid: 6843 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137563_fitted_models.rds + wildcards: gene=ENSG00000137563 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000124172_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124172_fitted_models.rds + jobid: 13417 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124172_fitted_models.rds + wildcards: gene=ENSG00000124172 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000160877_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160877_fitted_models.rds + jobid: 13815 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160877_fitted_models.rds + wildcards: gene=ENSG00000160877 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000229833_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000229833_fitted_models.rds + jobid: 13663 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000229833_fitted_models.rds + wildcards: gene=ENSG00000229833 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000074803_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000074803_fitted_models.rds + jobid: 10870 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000074803_fitted_models.rds + wildcards: gene=ENSG00000074803 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000181924_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000181924_fitted_models.rds + jobid: 8326 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000181924_fitted_models.rds + wildcards: gene=ENSG00000181924 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000119314_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119314_fitted_models.rds + jobid: 7501 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119314_fitted_models.rds + wildcards: gene=ENSG00000119314 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000184254_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184254_fitted_models.rds + jobid: 11201 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184254_fitted_models.rds + wildcards: gene=ENSG00000184254 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:38 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000126107_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000126107_fitted_models.rds + jobid: 507 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000126107_fitted_models.rds + wildcards: gene=ENSG00000126107 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000102119_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102119_fitted_models.rds + jobid: 6585 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102119_fitted_models.rds + wildcards: gene=ENSG00000102119 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000197111_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197111_fitted_models.rds + jobid: 9507 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197111_fitted_models.rds + wildcards: gene=ENSG00000197111 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000132646_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132646_fitted_models.rds + jobid: 13130 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132646_fitted_models.rds + wildcards: gene=ENSG00000132646 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000143768_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143768_fitted_models.rds + jobid: 1393 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143768_fitted_models.rds + wildcards: gene=ENSG00000143768 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000147065_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147065_fitted_models.rds + jobid: 6298 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147065_fitted_models.rds + wildcards: gene=ENSG00000147065 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000072832_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000072832_fitted_models.rds + jobid: 3403 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000072832_fitted_models.rds + wildcards: gene=ENSG00000072832 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000156925_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000156925_fitted_models.rds + jobid: 6532 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000156925_fitted_models.rds + wildcards: gene=ENSG00000156925 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000169174_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169174_fitted_models.rds + jobid: 584 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169174_fitted_models.rds + wildcards: gene=ENSG00000169174 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000104131_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104131_fitted_models.rds + jobid: 10857 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104131_fitted_models.rds + wildcards: gene=ENSG00000104131 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000069275_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000069275_fitted_models.rds + jobid: 1299 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000069275_fitted_models.rds + wildcards: gene=ENSG00000069275 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000137288_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137288_fitted_models.rds + jobid: 4862 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137288_fitted_models.rds + wildcards: gene=ENSG00000137288 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000109929_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000109929_fitted_models.rds + jobid: 8544 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000109929_fitted_models.rds + wildcards: gene=ENSG00000109929 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000058272_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000058272_fitted_models.rds + jobid: 9676 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000058272_fitted_models.rds + wildcards: gene=ENSG00000058272 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000233461_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000233461_fitted_models.rds + jobid: 1440 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000233461_fitted_models.rds + wildcards: gene=ENSG00000233461 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000171135_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171135_fitted_models.rds + jobid: 2527 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171135_fitted_models.rds + wildcards: gene=ENSG00000171135 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163435_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163435_fitted_models.rds + jobid: 1257 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163435_fitted_models.rds + wildcards: gene=ENSG00000163435 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000122378_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000122378_fitted_models.rds + jobid: 8904 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000122378_fitted_models.rds + wildcards: gene=ENSG00000122378 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000131187_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131187_fitted_models.rds + jobid: 4518 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131187_fitted_models.rds + wildcards: gene=ENSG00000131187 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000075790_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000075790_fitted_models.rds + jobid: 5853 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000075790_fitted_models.rds + wildcards: gene=ENSG00000075790 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198791_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198791_fitted_models.rds + jobid: 6665 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198791_fitted_models.rds + wildcards: gene=ENSG00000198791 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000096746_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000096746_fitted_models.rds + jobid: 8812 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000096746_fitted_models.rds + wildcards: gene=ENSG00000096746 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000269858_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000269858_fitted_models.rds + jobid: 14192 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000269858_fitted_models.rds + wildcards: gene=ENSG00000269858 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000051620_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000051620_fitted_models.rds + jobid: 5251 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000051620_fitted_models.rds + wildcards: gene=ENSG00000051620 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000203705_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000203705_fitted_models.rds + jobid: 1340 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000203705_fitted_models.rds + wildcards: gene=ENSG00000203705 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000110492_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000110492_fitted_models.rds + jobid: 8009 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000110492_fitted_models.rds + wildcards: gene=ENSG00000110492 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000108591_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108591_fitted_models.rds + jobid: 12162 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108591_fitted_models.rds + wildcards: gene=ENSG00000108591 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000154518_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000154518_fitted_models.rds + jobid: 2200 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000154518_fitted_models.rds + wildcards: gene=ENSG00000154518 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000170791_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170791_fitted_models.rds + jobid: 6828 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170791_fitted_models.rds + wildcards: gene=ENSG00000170791 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000224578_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000224578_fitted_models.rds + jobid: 15205 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000224578_fitted_models.rds + wildcards: gene=ENSG00000224578 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000075624_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000075624_fitted_models.rds + jobid: 5405 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000075624_fitted_models.rds + wildcards: gene=ENSG00000075624 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000152661_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000152661_fitted_models.rds + jobid: 5196 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000152661_fitted_models.rds + wildcards: gene=ENSG00000152661 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000124486_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124486_fitted_models.rds + jobid: 6180 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124486_fitted_models.rds + wildcards: gene=ENSG00000124486 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000116251_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116251_fitted_models.rds + jobid: 78 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116251_fitted_models.rds + wildcards: gene=ENSG00000116251 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000168288_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168288_fitted_models.rds + jobid: 2110 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168288_fitted_models.rds + wildcards: gene=ENSG00000168288 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000176485_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176485_fitted_models.rds + jobid: 8127 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176485_fitted_models.rds + wildcards: gene=ENSG00000176485 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000230798_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000230798_fitted_models.rds + jobid: 605 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000230798_fitted_models.rds + wildcards: gene=ENSG00000230798 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000172602_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172602_fitted_models.rds + jobid: 9438 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172602_fitted_models.rds + wildcards: gene=ENSG00000172602 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000168899_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168899_fitted_models.rds + jobid: 1898 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168899_fitted_models.rds + wildcards: gene=ENSG00000168899 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000141428_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141428_fitted_models.rds + jobid: 12941 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141428_fitted_models.rds + wildcards: gene=ENSG00000141428 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000169230_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169230_fitted_models.rds + jobid: 4514 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169230_fitted_models.rds + wildcards: gene=ENSG00000169230 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000125863_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125863_fitted_models.rds + jobid: 13148 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125863_fitted_models.rds + wildcards: gene=ENSG00000125863 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000135486_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135486_fitted_models.rds + jobid: 9516 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135486_fitted_models.rds + wildcards: gene=ENSG00000135486 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000143376_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143376_fitted_models.rds + jobid: 952 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143376_fitted_models.rds + wildcards: gene=ENSG00000143376 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000196230_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196230_fitted_models.rds + jobid: 4771 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196230_fitted_models.rds + wildcards: gene=ENSG00000196230 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000153044_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153044_fitted_models.rds + jobid: 4069 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153044_fitted_models.rds + wildcards: gene=ENSG00000153044 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000125445_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125445_fitted_models.rds + jobid: 12687 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125445_fitted_models.rds + wildcards: gene=ENSG00000125445 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000179915_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179915_fitted_models.rds + jobid: 1743 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179915_fitted_models.rds + wildcards: gene=ENSG00000179915 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000171806_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171806_fitted_models.rds + jobid: 1146 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171806_fitted_models.rds + wildcards: gene=ENSG00000171806 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000065600_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000065600_fitted_models.rds + jobid: 1334 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000065600_fitted_models.rds + wildcards: gene=ENSG00000065600 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000001036_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000001036_fitted_models.rds + jobid: 5266 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000001036_fitted_models.rds + wildcards: gene=ENSG00000001036 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000213988_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000213988_fitted_models.rds + jobid: 13961 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000213988_fitted_models.rds + wildcards: gene=ENSG00000213988 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000232677_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000232677_fitted_models.rds + jobid: 14084 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000232677_fitted_models.rds + wildcards: gene=ENSG00000232677 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000268751_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000268751_fitted_models.rds + jobid: 14029 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000268751_fitted_models.rds + wildcards: gene=ENSG00000268751 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000105486_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105486_fitted_models.rds + jobid: 14338 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105486_fitted_models.rds + wildcards: gene=ENSG00000105486 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000171863_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171863_fitted_models.rds + jobid: 1524 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171863_fitted_models.rds + wildcards: gene=ENSG00000171863 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000101198_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101198_fitted_models.rds + jobid: 13447 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101198_fitted_models.rds + wildcards: gene=ENSG00000101198 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000115977_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115977_fitted_models.rds + jobid: 1814 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115977_fitted_models.rds + wildcards: gene=ENSG00000115977 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000188976_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188976_fitted_models.rds + jobid: 7 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188976_fitted_models.rds + wildcards: gene=ENSG00000188976 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000197956_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197956_fitted_models.rds + jobid: 962 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197956_fitted_models.rds + wildcards: gene=ENSG00000197956 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000149150_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000149150_fitted_models.rds + jobid: 8042 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000149150_fitted_models.rds + wildcards: gene=ENSG00000149150 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000119411_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119411_fitted_models.rds + jobid: 7515 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119411_fitted_models.rds + wildcards: gene=ENSG00000119411 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000110700_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000110700_fitted_models.rds + jobid: 7911 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000110700_fitted_models.rds + wildcards: gene=ENSG00000110700 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000131653_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131653_fitted_models.rds + jobid: 11294 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131653_fitted_models.rds + wildcards: gene=ENSG00000131653 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000114739_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114739_fitted_models.rds + jobid: 2641 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114739_fitted_models.rds + wildcards: gene=ENSG00000114739 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000172531_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172531_fitted_models.rds + jobid: 8263 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172531_fitted_models.rds + wildcards: gene=ENSG00000172531 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000153157_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153157_fitted_models.rds + jobid: 4618 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153157_fitted_models.rds + wildcards: gene=ENSG00000153157 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000186432_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000186432_fitted_models.rds + jobid: 3186 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000186432_fitted_models.rds + wildcards: gene=ENSG00000186432 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000134049_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134049_fitted_models.rds + jobid: 12967 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134049_fitted_models.rds + wildcards: gene=ENSG00000134049 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000196581_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196581_fitted_models.rds + jobid: 74 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196581_fitted_models.rds + wildcards: gene=ENSG00000196581 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000129990_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000129990_fitted_models.rds + jobid: 14516 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000129990_fitted_models.rds + wildcards: gene=ENSG00000129990 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000122884_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000122884_fitted_models.rds + jobid: 8853 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000122884_fitted_models.rds + wildcards: gene=ENSG00000122884 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000277443_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000277443_fitted_models.rds + jobid: 5171 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000277443_fitted_models.rds + wildcards: gene=ENSG00000277443 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164434_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164434_fitted_models.rds + jobid: 5200 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164434_fitted_models.rds + wildcards: gene=ENSG00000164434 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000153902_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153902_fitted_models.rds + jobid: 14041 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153902_fitted_models.rds + wildcards: gene=ENSG00000153902 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000233098_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000233098_fitted_models.rds + jobid: 12188 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000233098_fitted_models.rds + wildcards: gene=ENSG00000233098 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000258315_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000258315_fitted_models.rds + jobid: 12036 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000258315_fitted_models.rds + wildcards: gene=ENSG00000258315 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000114784_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114784_fitted_models.rds + jobid: 2652 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114784_fitted_models.rds + wildcards: gene=ENSG00000114784 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000078725_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000078725_fitted_models.rds + jobid: 7533 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000078725_fitted_models.rds + wildcards: gene=ENSG00000078725 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000064961_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000064961_fitted_models.rds + jobid: 13578 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000064961_fitted_models.rds + wildcards: gene=ENSG00000064961 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000227640_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000227640_fitted_models.rds + jobid: 10174 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000227640_fitted_models.rds + wildcards: gene=ENSG00000227640 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000173744_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173744_fitted_models.rds + jobid: 2415 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173744_fitted_models.rds + wildcards: gene=ENSG00000173744 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000171865_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171865_fitted_models.rds + jobid: 1522 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171865_fitted_models.rds + wildcards: gene=ENSG00000171865 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000123395_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000123395_fitted_models.rds + jobid: 9487 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000123395_fitted_models.rds + wildcards: gene=ENSG00000123395 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000103485_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000103485_fitted_models.rds + jobid: 11528 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000103485_fitted_models.rds + wildcards: gene=ENSG00000103485 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000221983_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000221983_fitted_models.rds + jobid: 13922 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000221983_fitted_models.rds + wildcards: gene=ENSG00000221983 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000126698_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000126698_fitted_models.rds + jobid: 314 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000126698_fitted_models.rds + wildcards: gene=ENSG00000126698 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000101474_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101474_fitted_models.rds + jobid: 13196 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101474_fitted_models.rds + wildcards: gene=ENSG00000101474 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000147027_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147027_fitted_models.rds + jobid: 6167 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147027_fitted_models.rds + wildcards: gene=ENSG00000147027 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000153187_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153187_fitted_models.rds + jobid: 1488 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153187_fitted_models.rds + wildcards: gene=ENSG00000153187 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000130475_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130475_fitted_models.rds + jobid: 13897 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130475_fitted_models.rds + wildcards: gene=ENSG00000130475 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000113594_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113594_fitted_models.rds + jobid: 3990 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113594_fitted_models.rds + wildcards: gene=ENSG00000113594 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000176971_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176971_fitted_models.rds + jobid: 7941 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176971_fitted_models.rds + wildcards: gene=ENSG00000176971 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000067533_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000067533_fitted_models.rds + jobid: 1354 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000067533_fitted_models.rds + wildcards: gene=ENSG00000067533 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100567_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100567_fitted_models.rds + jobid: 10445 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100567_fitted_models.rds + wildcards: gene=ENSG00000100567 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000008083_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000008083_fitted_models.rds + jobid: 4638 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000008083_fitted_models.rds + wildcards: gene=ENSG00000008083 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000185664_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185664_fitted_models.rds + jobid: 9537 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185664_fitted_models.rds + wildcards: gene=ENSG00000185664 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000054654_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000054654_fitted_models.rds + jobid: 10478 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000054654_fitted_models.rds + wildcards: gene=ENSG00000054654 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000113296_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113296_fitted_models.rds + jobid: 4129 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113296_fitted_models.rds + wildcards: gene=ENSG00000113296 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000184752_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184752_fitted_models.rds + jobid: 9712 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184752_fitted_models.rds + wildcards: gene=ENSG00000184752 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000109111_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000109111_fitted_models.rds + jobid: 12218 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000109111_fitted_models.rds + wildcards: gene=ENSG00000109111 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000105426_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105426_fitted_models.rds + jobid: 13619 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105426_fitted_models.rds + wildcards: gene=ENSG00000105426 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000082146_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000082146_fitted_models.rds + jobid: 2295 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000082146_fitted_models.rds + wildcards: gene=ENSG00000082146 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000111961_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111961_fitted_models.rds + jobid: 5279 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111961_fitted_models.rds + wildcards: gene=ENSG00000111961 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000170801_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170801_fitted_models.rds + jobid: 3419 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170801_fitted_models.rds + wildcards: gene=ENSG00000170801 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000137575_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137575_fitted_models.rds + jobid: 6832 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137575_fitted_models.rds + wildcards: gene=ENSG00000137575 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000083123_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000083123_fitted_models.rds + jobid: 5062 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000083123_fitted_models.rds + wildcards: gene=ENSG00000083123 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000145216_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145216_fitted_models.rds + jobid: 3520 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145216_fitted_models.rds + wildcards: gene=ENSG00000145216 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000204392_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204392_fitted_models.rds + jobid: 4803 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204392_fitted_models.rds + wildcards: gene=ENSG00000204392 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000092421_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000092421_fitted_models.rds + jobid: 4230 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000092421_fitted_models.rds + wildcards: gene=ENSG00000092421 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000140988_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140988_fitted_models.rds + jobid: 11280 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140988_fitted_models.rds + wildcards: gene=ENSG00000140988 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000103351_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000103351_fitted_models.rds + jobid: 11350 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000103351_fitted_models.rds + wildcards: gene=ENSG00000103351 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000204842_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204842_fitted_models.rds + jobid: 9811 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204842_fitted_models.rds + wildcards: gene=ENSG00000204842 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000166501_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166501_fitted_models.rds + jobid: 11488 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166501_fitted_models.rds + wildcards: gene=ENSG00000166501 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167522_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167522_fitted_models.rds + jobid: 11910 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167522_fitted_models.rds + wildcards: gene=ENSG00000167522 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000117868_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117868_fitted_models.rds + jobid: 6073 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117868_fitted_models.rds + wildcards: gene=ENSG00000117868 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000131669_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131669_fitted_models.rds + jobid: 7414 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131669_fitted_models.rds + wildcards: gene=ENSG00000131669 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000119969_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119969_fitted_models.rds + jobid: 8962 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119969_fitted_models.rds + wildcards: gene=ENSG00000119969 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000124802_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124802_fitted_models.rds + jobid: 4611 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124802_fitted_models.rds + wildcards: gene=ENSG00000124802 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164091_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164091_fitted_models.rds + jobid: 2816 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164091_fitted_models.rds + wildcards: gene=ENSG00000164091 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000205309_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000205309_fitted_models.rds + jobid: 12152 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000205309_fitted_models.rds + wildcards: gene=ENSG00000205309 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000122642_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000122642_fitted_models.rds + jobid: 5514 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000122642_fitted_models.rds + wildcards: gene=ENSG00000122642 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000156453_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000156453_fitted_models.rds + jobid: 4376 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000156453_fitted_models.rds + wildcards: gene=ENSG00000156453 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000112773_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112773_fitted_models.rds + jobid: 5065 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112773_fitted_models.rds + wildcards: gene=ENSG00000112773 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167112_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167112_fitted_models.rds + jobid: 7609 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167112_fitted_models.rds + wildcards: gene=ENSG00000167112 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000099956_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099956_fitted_models.rds + jobid: 14716 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099956_fitted_models.rds + wildcards: gene=ENSG00000099956 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000122729_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000122729_fitted_models.rds + jobid: 7238 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000122729_fitted_models.rds + wildcards: gene=ENSG00000122729 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000108344_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108344_fitted_models.rds + jobid: 12335 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108344_fitted_models.rds + wildcards: gene=ENSG00000108344 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000145782_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145782_fitted_models.rds + jobid: 4226 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145782_fitted_models.rds + wildcards: gene=ENSG00000145782 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000129055_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000129055_fitted_models.rds + jobid: 3084 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000129055_fitted_models.rds + wildcards: gene=ENSG00000129055 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000130520_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130520_fitted_models.rds + jobid: 13913 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130520_fitted_models.rds + wildcards: gene=ENSG00000130520 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000133393_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133393_fitted_models.rds + jobid: 11435 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133393_fitted_models.rds + wildcards: gene=ENSG00000133393 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000109519_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000109519_fitted_models.rds + jobid: 3416 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000109519_fitted_models.rds + wildcards: gene=ENSG00000109519 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000205542_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000205542_fitted_models.rds + jobid: 6112 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000205542_fitted_models.rds + wildcards: gene=ENSG00000205542 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000175216_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175216_fitted_models.rds + jobid: 8015 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175216_fitted_models.rds + wildcards: gene=ENSG00000175216 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164611_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164611_fitted_models.rds + jobid: 4454 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164611_fitted_models.rds + wildcards: gene=ENSG00000164611 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000171956_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171956_fitted_models.rds + jobid: 10936 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171956_fitted_models.rds + wildcards: gene=ENSG00000171956 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000096696_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000096696_fitted_models.rds + jobid: 4607 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000096696_fitted_models.rds + wildcards: gene=ENSG00000096696 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000088832_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000088832_fitted_models.rds + jobid: 13088 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000088832_fitted_models.rds + wildcards: gene=ENSG00000088832 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000285053_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000285053_fitted_models.rds + jobid: 15189 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000285053_fitted_models.rds + wildcards: gene=ENSG00000285053 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000130255_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130255_fitted_models.rds + jobid: 13623 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130255_fitted_models.rds + wildcards: gene=ENSG00000130255 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000140332_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140332_fitted_models.rds + jobid: 11011 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140332_fitted_models.rds + wildcards: gene=ENSG00000140332 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000063046_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000063046_fitted_models.rds + jobid: 9491 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000063046_fitted_models.rds + wildcards: gene=ENSG00000063046 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000196247_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196247_fitted_models.rds + jobid: 5596 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196247_fitted_models.rds + wildcards: gene=ENSG00000196247 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000120885_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000120885_fitted_models.rds + jobid: 6727 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000120885_fitted_models.rds + wildcards: gene=ENSG00000120885 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000168028_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168028_fitted_models.rds + jobid: 2650 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168028_fitted_models.rds + wildcards: gene=ENSG00000168028 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100104_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100104_fitted_models.rds + jobid: 14741 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100104_fitted_models.rds + wildcards: gene=ENSG00000100104 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000133935_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133935_fitted_models.rds + jobid: 10570 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133935_fitted_models.rds + wildcards: gene=ENSG00000133935 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000071127_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000071127_fitted_models.rds + jobid: 3424 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000071127_fitted_models.rds + wildcards: gene=ENSG00000071127 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000139131_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000139131_fitted_models.rds + jobid: 9387 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000139131_fitted_models.rds + wildcards: gene=ENSG00000139131 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000176973_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176973_fitted_models.rds + jobid: 8194 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176973_fitted_models.rds + wildcards: gene=ENSG00000176973 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000135643_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135643_fitted_models.rds + jobid: 9652 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135643_fitted_models.rds + wildcards: gene=ENSG00000135643 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000140575_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140575_fitted_models.rds + jobid: 11169 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140575_fitted_models.rds + wildcards: gene=ENSG00000140575 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163349_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163349_fitted_models.rds + jobid: 819 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163349_fitted_models.rds + wildcards: gene=ENSG00000163349 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000143401_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143401_fitted_models.rds + jobid: 909 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143401_fitted_models.rds + wildcards: gene=ENSG00000143401 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000176101_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176101_fitted_models.rds + jobid: 7742 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176101_fitted_models.rds + wildcards: gene=ENSG00000176101 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000204220_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204220_fitted_models.rds + jobid: 4851 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204220_fitted_models.rds + wildcards: gene=ENSG00000204220 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000197530_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197530_fitted_models.rds + jobid: 42 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197530_fitted_models.rds + wildcards: gene=ENSG00000197530 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198492_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198492_fitted_models.rds + jobid: 326 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198492_fitted_models.rds + wildcards: gene=ENSG00000198492 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000147654_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147654_fitted_models.rds + jobid: 7013 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147654_fitted_models.rds + wildcards: gene=ENSG00000147654 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000128965_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128965_fitted_models.rds + jobid: 10813 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128965_fitted_models.rds + wildcards: gene=ENSG00000128965 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000101132_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101132_fitted_models.rds + jobid: 13393 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101132_fitted_models.rds + wildcards: gene=ENSG00000101132 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000117592_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117592_fitted_models.rds + jobid: 1158 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117592_fitted_models.rds + wildcards: gene=ENSG00000117592 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000145050_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145050_fitted_models.rds + jobid: 2798 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145050_fitted_models.rds + wildcards: gene=ENSG00000145050 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000171848_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171848_fitted_models.rds + jobid: 1546 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171848_fitted_models.rds + wildcards: gene=ENSG00000171848 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000214046_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000214046_fitted_models.rds + jobid: 13870 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000214046_fitted_models.rds + wildcards: gene=ENSG00000214046 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000139684_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000139684_fitted_models.rds + jobid: 10092 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000139684_fitted_models.rds + wildcards: gene=ENSG00000139684 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000157916_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000157916_fitted_models.rds + jobid: 57 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000157916_fitted_models.rds + wildcards: gene=ENSG00000157916 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000162377_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162377_fitted_models.rds + jobid: 559 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162377_fitted_models.rds + wildcards: gene=ENSG00000162377 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000148803_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000148803_fitted_models.rds + jobid: 9179 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000148803_fitted_models.rds + wildcards: gene=ENSG00000148803 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000196267_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196267_fitted_models.rds + jobid: 14456 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196267_fitted_models.rds + wildcards: gene=ENSG00000196267 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164104_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164104_fitted_models.rds + jobid: 3846 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164104_fitted_models.rds + wildcards: gene=ENSG00000164104 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000140374_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140374_fitted_models.rds + jobid: 11076 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140374_fitted_models.rds + wildcards: gene=ENSG00000140374 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:39 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000085117_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000085117_fitted_models.rds + jobid: 7994 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000085117_fitted_models.rds + wildcards: gene=ENSG00000085117 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000105193_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105193_fitted_models.rds + jobid: 14159 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105193_fitted_models.rds + wildcards: gene=ENSG00000105193 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100097_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100097_fitted_models.rds + jobid: 14841 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100097_fitted_models.rds + wildcards: gene=ENSG00000100097 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000090372_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000090372_fitted_models.rds + jobid: 14313 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000090372_fitted_models.rds + wildcards: gene=ENSG00000090372 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000067704_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000067704_fitted_models.rds + jobid: 1360 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000067704_fitted_models.rds + wildcards: gene=ENSG00000067704 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000035141_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000035141_fitted_models.rds + jobid: 1825 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000035141_fitted_models.rds + wildcards: gene=ENSG00000035141 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000011295_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000011295_fitted_models.rds + jobid: 12134 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000011295_fitted_models.rds + wildcards: gene=ENSG00000011295 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000136718_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136718_fitted_models.rds + jobid: 2075 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136718_fitted_models.rds + wildcards: gene=ENSG00000136718 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000161960_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000161960_fitted_models.rds + jobid: 12067 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000161960_fitted_models.rds + wildcards: gene=ENSG00000161960 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000169299_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169299_fitted_models.rds + jobid: 3468 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169299_fitted_models.rds + wildcards: gene=ENSG00000169299 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000008405_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000008405_fitted_models.rds + jobid: 9770 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000008405_fitted_models.rds + wildcards: gene=ENSG00000008405 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000003096_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000003096_fitted_models.rds + jobid: 6453 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000003096_fitted_models.rds + wildcards: gene=ENSG00000003096 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000137547_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137547_fitted_models.rds + jobid: 6821 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137547_fitted_models.rds + wildcards: gene=ENSG00000137547 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000049449_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000049449_fitted_models.rds + jobid: 7957 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000049449_fitted_models.rds + wildcards: gene=ENSG00000049449 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000175390_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175390_fitted_models.rds + jobid: 7859 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175390_fitted_models.rds + wildcards: gene=ENSG00000175390 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000103363_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000103363_fitted_models.rds + jobid: 11317 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000103363_fitted_models.rds + wildcards: gene=ENSG00000103363 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167157_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167157_fitted_models.rds + jobid: 7641 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167157_fitted_models.rds + wildcards: gene=ENSG00000167157 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000196776_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196776_fitted_models.rds + jobid: 2947 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196776_fitted_models.rds + wildcards: gene=ENSG00000196776 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000130810_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130810_fitted_models.rds + jobid: 13710 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130810_fitted_models.rds + wildcards: gene=ENSG00000130810 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000074317_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000074317_fitted_models.rds + jobid: 4503 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000074317_fitted_models.rds + wildcards: gene=ENSG00000074317 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000106829_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106829_fitted_models.rds + jobid: 7371 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106829_fitted_models.rds + wildcards: gene=ENSG00000106829 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000197989_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197989_fitted_models.rds + jobid: 322 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197989_fitted_models.rds + wildcards: gene=ENSG00000197989 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000189159_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000189159_fitted_models.rds + jobid: 12683 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000189159_fitted_models.rds + wildcards: gene=ENSG00000189159 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000110696_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000110696_fitted_models.rds + jobid: 7909 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000110696_fitted_models.rds + wildcards: gene=ENSG00000110696 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000165732_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165732_fitted_models.rds + jobid: 8820 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165732_fitted_models.rds + wildcards: gene=ENSG00000165732 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000136110_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136110_fitted_models.rds + jobid: 10139 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136110_fitted_models.rds + wildcards: gene=ENSG00000136110 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000134686_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134686_fitted_models.rds + jobid: 376 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134686_fitted_models.rds + wildcards: gene=ENSG00000134686 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000115484_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115484_fitted_models.rds + jobid: 1777 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115484_fitted_models.rds + wildcards: gene=ENSG00000115484 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000154917_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000154917_fitted_models.rds + jobid: 3080 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000154917_fitted_models.rds + wildcards: gene=ENSG00000154917 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000027697_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000027697_fitted_models.rds + jobid: 5246 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000027697_fitted_models.rds + wildcards: gene=ENSG00000027697 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000134802_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134802_fitted_models.rds + jobid: 8040 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134802_fitted_models.rds + wildcards: gene=ENSG00000134802 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000155660_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000155660_fitted_models.rds + jobid: 6015 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000155660_fitted_models.rds + wildcards: gene=ENSG00000155660 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000132359_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132359_fitted_models.rds + jobid: 11972 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132359_fitted_models.rds + wildcards: gene=ENSG00000132359 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000142168_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142168_fitted_models.rds + jobid: 15045 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142168_fitted_models.rds + wildcards: gene=ENSG00000142168 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000101849_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101849_fitted_models.rds + jobid: 6103 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101849_fitted_models.rds + wildcards: gene=ENSG00000101849 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000240972_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000240972_fitted_models.rds + jobid: 14720 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000240972_fitted_models.rds + wildcards: gene=ENSG00000240972 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000076043_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000076043_fitted_models.rds + jobid: 8487 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000076043_fitted_models.rds + wildcards: gene=ENSG00000076043 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000133142_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133142_fitted_models.rds + jobid: 6409 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133142_fitted_models.rds + wildcards: gene=ENSG00000133142 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164136_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164136_fitted_models.rds + jobid: 3771 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164136_fitted_models.rds + wildcards: gene=ENSG00000164136 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000120837_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000120837_fitted_models.rds + jobid: 9751 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000120837_fitted_models.rds + wildcards: gene=ENSG00000120837 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000011347_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000011347_fitted_models.rds + jobid: 8082 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000011347_fitted_models.rds + wildcards: gene=ENSG00000011347 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000140263_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140263_fitted_models.rds + jobid: 10861 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140263_fitted_models.rds + wildcards: gene=ENSG00000140263 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000140675_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140675_fitted_models.rds + jobid: 11609 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140675_fitted_models.rds + wildcards: gene=ENSG00000140675 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000110958_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000110958_fitted_models.rds + jobid: 9568 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000110958_fitted_models.rds + wildcards: gene=ENSG00000110958 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000127184_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000127184_fitted_models.rds + jobid: 4151 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000127184_fitted_models.rds + wildcards: gene=ENSG00000127184 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000106537_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106537_fitted_models.rds + jobid: 5444 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106537_fitted_models.rds + wildcards: gene=ENSG00000106537 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000136270_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136270_fitted_models.rds + jobid: 5569 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136270_fitted_models.rds + wildcards: gene=ENSG00000136270 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000105401_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105401_fitted_models.rds + jobid: 13726 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105401_fitted_models.rds + wildcards: gene=ENSG00000105401 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000176058_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176058_fitted_models.rds + jobid: 7743 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176058_fitted_models.rds + wildcards: gene=ENSG00000176058 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167994_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167994_fitted_models.rds + jobid: 8090 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167994_fitted_models.rds + wildcards: gene=ENSG00000167994 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000135932_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135932_fitted_models.rds + jobid: 2424 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135932_fitted_models.rds + wildcards: gene=ENSG00000135932 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000112081_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112081_fitted_models.rds + jobid: 4896 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112081_fitted_models.rds + wildcards: gene=ENSG00000112081 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000236404_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000236404_fitted_models.rds + jobid: 7175 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000236404_fitted_models.rds + wildcards: gene=ENSG00000236404 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000196465_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196465_fitted_models.rds + jobid: 9548 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196465_fitted_models.rds + wildcards: gene=ENSG00000196465 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000120533_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000120533_fitted_models.rds + jobid: 7012 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000120533_fitted_models.rds + wildcards: gene=ENSG00000120533 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000170310_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170310_fitted_models.rds + jobid: 12106 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170310_fitted_models.rds + wildcards: gene=ENSG00000170310 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000178053_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000178053_fitted_models.rds + jobid: 3176 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000178053_fitted_models.rds + wildcards: gene=ENSG00000178053 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000177426_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177426_fitted_models.rds + jobid: 12848 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177426_fitted_models.rds + wildcards: gene=ENSG00000177426 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000187479_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000187479_fitted_models.rds + jobid: 7991 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000187479_fitted_models.rds + wildcards: gene=ENSG00000187479 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000136381_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136381_fitted_models.rds + jobid: 11092 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136381_fitted_models.rds + wildcards: gene=ENSG00000136381 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000119888_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119888_fitted_models.rds + jobid: 1733 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119888_fitted_models.rds + wildcards: gene=ENSG00000119888 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163961_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163961_fitted_models.rds + jobid: 3316 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163961_fitted_models.rds + wildcards: gene=ENSG00000163961 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000236673_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000236673_fitted_models.rds + jobid: 5226 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000236673_fitted_models.rds + wildcards: gene=ENSG00000236673 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000155099_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000155099_fitted_models.rds + jobid: 6936 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000155099_fitted_models.rds + wildcards: gene=ENSG00000155099 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000253304_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000253304_fitted_models.rds + jobid: 329 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000253304_fitted_models.rds + wildcards: gene=ENSG00000253304 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000196405_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196405_fitted_models.rds + jobid: 10668 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196405_fitted_models.rds + wildcards: gene=ENSG00000196405 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000213719_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000213719_fitted_models.rds + jobid: 4800 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000213719_fitted_models.rds + wildcards: gene=ENSG00000213719 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000083845_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000083845_fitted_models.rds + jobid: 14608 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000083845_fitted_models.rds + wildcards: gene=ENSG00000083845 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167700_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167700_fitted_models.rds + jobid: 7155 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167700_fitted_models.rds + wildcards: gene=ENSG00000167700 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000082153_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000082153_fitted_models.rds + jobid: 2284 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000082153_fitted_models.rds + wildcards: gene=ENSG00000082153 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000140876_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140876_fitted_models.rds + jobid: 11837 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140876_fitted_models.rds + wildcards: gene=ENSG00000140876 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000112297_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112297_fitted_models.rds + jobid: 5128 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112297_fitted_models.rds + wildcards: gene=ENSG00000112297 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000128534_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128534_fitted_models.rds + jobid: 5881 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128534_fitted_models.rds + wildcards: gene=ENSG00000128534 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000230623_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000230623_fitted_models.rds + jobid: 1234 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000230623_fitted_models.rds + wildcards: gene=ENSG00000230623 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000172757_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172757_fitted_models.rds + jobid: 8205 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172757_fitted_models.rds + wildcards: gene=ENSG00000172757 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000062485_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000062485_fitted_models.rds + jobid: 9555 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000062485_fitted_models.rds + wildcards: gene=ENSG00000062485 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000260411_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000260411_fitted_models.rds + jobid: 11381 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000260411_fitted_models.rds + wildcards: gene=ENSG00000260411 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163812_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163812_fitted_models.rds + jobid: 2690 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163812_fitted_models.rds + wildcards: gene=ENSG00000163812 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000129757_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000129757_fitted_models.rds + jobid: 7820 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000129757_fitted_models.rds + wildcards: gene=ENSG00000129757 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000123136_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000123136_fitted_models.rds + jobid: 13839 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000123136_fitted_models.rds + wildcards: gene=ENSG00000123136 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000130881_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130881_fitted_models.rds + jobid: 14014 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130881_fitted_models.rds + wildcards: gene=ENSG00000130881 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000139343_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000139343_fitted_models.rds + jobid: 9718 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000139343_fitted_models.rds + wildcards: gene=ENSG00000139343 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000277224_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000277224_fitted_models.rds + jobid: 4686 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000277224_fitted_models.rds + wildcards: gene=ENSG00000277224 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000102575_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102575_fitted_models.rds + jobid: 13763 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102575_fitted_models.rds + wildcards: gene=ENSG00000102575 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000182551_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182551_fitted_models.rds + jobid: 1520 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182551_fitted_models.rds + wildcards: gene=ENSG00000182551 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164096_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164096_fitted_models.rds + jobid: 3720 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164096_fitted_models.rds + wildcards: gene=ENSG00000164096 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000255198_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000255198_fitted_models.rds + jobid: 11281 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000255198_fitted_models.rds + wildcards: gene=ENSG00000255198 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000141968_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141968_fitted_models.rds + jobid: 13653 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141968_fitted_models.rds + wildcards: gene=ENSG00000141968 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000086475_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000086475_fitted_models.rds + jobid: 8652 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000086475_fitted_models.rds + wildcards: gene=ENSG00000086475 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000277150_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000277150_fitted_models.rds + jobid: 6610 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000277150_fitted_models.rds + wildcards: gene=ENSG00000277150 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000154582_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000154582_fitted_models.rds + jobid: 6887 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000154582_fitted_models.rds + wildcards: gene=ENSG00000154582 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000128564_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128564_fitted_models.rds + jobid: 5805 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128564_fitted_models.rds + wildcards: gene=ENSG00000128564 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000146574_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000146574_fitted_models.rds + jobid: 5424 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000146574_fitted_models.rds + wildcards: gene=ENSG00000146574 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000128272_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128272_fitted_models.rds + jobid: 14887 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128272_fitted_models.rds + wildcards: gene=ENSG00000128272 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000145194_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145194_fitted_models.rds + jobid: 3252 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145194_fitted_models.rds + wildcards: gene=ENSG00000145194 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000136518_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136518_fitted_models.rds + jobid: 3226 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136518_fitted_models.rds + wildcards: gene=ENSG00000136518 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000156482_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000156482_fitted_models.rds + jobid: 6969 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000156482_fitted_models.rds + wildcards: gene=ENSG00000156482 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000206527_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000206527_fitted_models.rds + jobid: 3019 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000206527_fitted_models.rds + wildcards: gene=ENSG00000206527 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000119335_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119335_fitted_models.rds + jobid: 7618 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119335_fitted_models.rds + wildcards: gene=ENSG00000119335 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163882_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163882_fitted_models.rds + jobid: 3258 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163882_fitted_models.rds + wildcards: gene=ENSG00000163882 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000159199_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000159199_fitted_models.rds + jobid: 12494 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000159199_fitted_models.rds + wildcards: gene=ENSG00000159199 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000182010_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182010_fitted_models.rds + jobid: 8796 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182010_fitted_models.rds + wildcards: gene=ENSG00000182010 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000160785_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160785_fitted_models.rds + jobid: 1041 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160785_fitted_models.rds + wildcards: gene=ENSG00000160785 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100360_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100360_fitted_models.rds + jobid: 14829 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100360_fitted_models.rds + wildcards: gene=ENSG00000100360 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000142507_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142507_fitted_models.rds + jobid: 11998 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142507_fitted_models.rds + wildcards: gene=ENSG00000142507 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000213551_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000213551_fitted_models.rds + jobid: 8858 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000213551_fitted_models.rds + wildcards: gene=ENSG00000213551 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000166946_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166946_fitted_models.rds + jobid: 10837 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166946_fitted_models.rds + wildcards: gene=ENSG00000166946 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000159140_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000159140_fitted_models.rds + jobid: 15065 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000159140_fitted_models.rds + wildcards: gene=ENSG00000159140 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000107672_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107672_fitted_models.rds + jobid: 9125 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107672_fitted_models.rds + wildcards: gene=ENSG00000107672 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000105146_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105146_fitted_models.rds + jobid: 14556 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105146_fitted_models.rds + wildcards: gene=ENSG00000105146 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000095794_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000095794_fitted_models.rds + jobid: 8728 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000095794_fitted_models.rds + wildcards: gene=ENSG00000095794 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000189077_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000189077_fitted_models.rds + jobid: 5658 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000189077_fitted_models.rds + wildcards: gene=ENSG00000189077 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000124383_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124383_fitted_models.rds + jobid: 1832 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124383_fitted_models.rds + wildcards: gene=ENSG00000124383 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000154277_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000154277_fitted_models.rds + jobid: 3489 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000154277_fitted_models.rds + wildcards: gene=ENSG00000154277 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000177606_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177606_fitted_models.rds + jobid: 592 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177606_fitted_models.rds + wildcards: gene=ENSG00000177606 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000225921_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000225921_fitted_models.rds + jobid: 4630 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000225921_fitted_models.rds + wildcards: gene=ENSG00000225921 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000168936_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168936_fitted_models.rds + jobid: 3367 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168936_fitted_models.rds + wildcards: gene=ENSG00000168936 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000188816_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188816_fitted_models.rds + jobid: 9135 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188816_fitted_models.rds + wildcards: gene=ENSG00000188816 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000165475_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165475_fitted_models.rds + jobid: 9980 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165475_fitted_models.rds + wildcards: gene=ENSG00000165475 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000132361_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132361_fitted_models.rds + jobid: 11970 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132361_fitted_models.rds + wildcards: gene=ENSG00000132361 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100605_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100605_fitted_models.rds + jobid: 10628 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100605_fitted_models.rds + wildcards: gene=ENSG00000100605 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000234636_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000234636_fitted_models.rds + jobid: 6179 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000234636_fitted_models.rds + wildcards: gene=ENSG00000234636 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000114573_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114573_fitted_models.rds + jobid: 2971 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114573_fitted_models.rds + wildcards: gene=ENSG00000114573 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000135624_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135624_fitted_models.rds + jobid: 1843 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135624_fitted_models.rds + wildcards: gene=ENSG00000135624 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000169045_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169045_fitted_models.rds + jobid: 4546 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169045_fitted_models.rds + wildcards: gene=ENSG00000169045 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164985_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164985_fitted_models.rds + jobid: 7208 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164985_fitted_models.rds + wildcards: gene=ENSG00000164985 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000251363_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000251363_fitted_models.rds + jobid: 10371 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000251363_fitted_models.rds + wildcards: gene=ENSG00000251363 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000108666_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108666_fitted_models.rds + jobid: 12264 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108666_fitted_models.rds + wildcards: gene=ENSG00000108666 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000099625_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099625_fitted_models.rds + jobid: 13511 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099625_fitted_models.rds + wildcards: gene=ENSG00000099625 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000096080_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000096080_fitted_models.rds + jobid: 4973 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000096080_fitted_models.rds + wildcards: gene=ENSG00000096080 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000135842_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135842_fitted_models.rds + jobid: 1209 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135842_fitted_models.rds + wildcards: gene=ENSG00000135842 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000138668_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138668_fitted_models.rds + jobid: 3598 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138668_fitted_models.rds + wildcards: gene=ENSG00000138668 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000004961_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000004961_fitted_models.rds + jobid: 6109 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000004961_fitted_models.rds + wildcards: gene=ENSG00000004961 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000107562_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107562_fitted_models.rds + jobid: 8749 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107562_fitted_models.rds + wildcards: gene=ENSG00000107562 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000272755_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000272755_fitted_models.rds + jobid: 892 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000272755_fitted_models.rds + wildcards: gene=ENSG00000272755 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164162_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164162_fitted_models.rds + jobid: 3778 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164162_fitted_models.rds + wildcards: gene=ENSG00000164162 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000197170_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197170_fitted_models.rds + jobid: 12636 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197170_fitted_models.rds + wildcards: gene=ENSG00000197170 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000111247_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111247_fitted_models.rds + jobid: 9216 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111247_fitted_models.rds + wildcards: gene=ENSG00000111247 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000134986_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134986_fitted_models.rds + jobid: 4210 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134986_fitted_models.rds + wildcards: gene=ENSG00000134986 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000106591_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106591_fitted_models.rds + jobid: 5540 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106591_fitted_models.rds + wildcards: gene=ENSG00000106591 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000146463_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000146463_fitted_models.rds + jobid: 386 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000146463_fitted_models.rds + wildcards: gene=ENSG00000146463 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000118257_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000118257_fitted_models.rds + jobid: 2314 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000118257_fitted_models.rds + wildcards: gene=ENSG00000118257 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000188603_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188603_fitted_models.rds + jobid: 11507 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188603_fitted_models.rds + wildcards: gene=ENSG00000188603 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000188612_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188612_fitted_models.rds + jobid: 12684 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188612_fitted_models.rds + wildcards: gene=ENSG00000188612 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000267279_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000267279_fitted_models.rds + jobid: 13015 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000267279_fitted_models.rds + wildcards: gene=ENSG00000267279 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000264569_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000264569_fitted_models.rds + jobid: 12808 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000264569_fitted_models.rds + wildcards: gene=ENSG00000264569 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000157404_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000157404_fitted_models.rds + jobid: 3524 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000157404_fitted_models.rds + wildcards: gene=ENSG00000157404 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000011009_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000011009_fitted_models.rds + jobid: 244 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000011009_fitted_models.rds + wildcards: gene=ENSG00000011009 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000156011_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000156011_fitted_models.rds + jobid: 6675 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000156011_fitted_models.rds + wildcards: gene=ENSG00000156011 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000075142_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000075142_fitted_models.rds + jobid: 5693 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000075142_fitted_models.rds + wildcards: gene=ENSG00000075142 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000055211_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000055211_fitted_models.rds + jobid: 5284 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000055211_fitted_models.rds + wildcards: gene=ENSG00000055211 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000254277_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000254277_fitted_models.rds + jobid: 6877 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000254277_fitted_models.rds + wildcards: gene=ENSG00000254277 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000162817_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162817_fitted_models.rds + jobid: 1363 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162817_fitted_models.rds + wildcards: gene=ENSG00000162817 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000104964_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104964_fitted_models.rds + jobid: 13569 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104964_fitted_models.rds + wildcards: gene=ENSG00000104964 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000104679_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104679_fitted_models.rds + jobid: 6706 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104679_fitted_models.rds + wildcards: gene=ENSG00000104679 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000102096_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102096_fitted_models.rds + jobid: 6229 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102096_fitted_models.rds + wildcards: gene=ENSG00000102096 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000135845_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135845_fitted_models.rds + jobid: 1155 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135845_fitted_models.rds + wildcards: gene=ENSG00000135845 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000115241_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115241_fitted_models.rds + jobid: 1636 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115241_fitted_models.rds + wildcards: gene=ENSG00000115241 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163904_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163904_fitted_models.rds + jobid: 3269 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163904_fitted_models.rds + wildcards: gene=ENSG00000163904 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000072042_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000072042_fitted_models.rds + jobid: 10502 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000072042_fitted_models.rds + wildcards: gene=ENSG00000072042 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000115216_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115216_fitted_models.rds + jobid: 1637 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115216_fitted_models.rds + wildcards: gene=ENSG00000115216 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000125166_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125166_fitted_models.rds + jobid: 11699 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125166_fitted_models.rds + wildcards: gene=ENSG00000125166 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000120071_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000120071_fitted_models.rds + jobid: 12464 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000120071_fitted_models.rds + wildcards: gene=ENSG00000120071 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000168002_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168002_fitted_models.rds + jobid: 8113 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168002_fitted_models.rds + wildcards: gene=ENSG00000168002 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000104327_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104327_fitted_models.rds + jobid: 6931 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104327_fitted_models.rds + wildcards: gene=ENSG00000104327 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000104886_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104886_fitted_models.rds + jobid: 13546 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104886_fitted_models.rds + wildcards: gene=ENSG00000104886 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000180596_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000180596_fitted_models.rds + jobid: 4679 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000180596_fitted_models.rds + wildcards: gene=ENSG00000180596 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000174498_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000174498_fitted_models.rds + jobid: 10976 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000174498_fitted_models.rds + wildcards: gene=ENSG00000174498 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000197653_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197653_fitted_models.rds + jobid: 9933 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197653_fitted_models.rds + wildcards: gene=ENSG00000197653 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000007392_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000007392_fitted_models.rds + jobid: 11219 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000007392_fitted_models.rds + wildcards: gene=ENSG00000007392 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000144580_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000144580_fitted_models.rds + jobid: 2369 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000144580_fitted_models.rds + wildcards: gene=ENSG00000144580 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000204394_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204394_fitted_models.rds + jobid: 4802 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204394_fitted_models.rds + wildcards: gene=ENSG00000204394 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000188643_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188643_fitted_models.rds + jobid: 964 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188643_fitted_models.rds + wildcards: gene=ENSG00000188643 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000211456_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000211456_fitted_models.rds + jobid: 2697 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000211456_fitted_models.rds + wildcards: gene=ENSG00000211456 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:40 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163931_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163931_fitted_models.rds + jobid: 2834 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163931_fitted_models.rds + wildcards: gene=ENSG00000163931 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000197136_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197136_fitted_models.rds + jobid: 8199 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197136_fitted_models.rds + wildcards: gene=ENSG00000197136 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000143153_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143153_fitted_models.rds + jobid: 1140 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143153_fitted_models.rds + wildcards: gene=ENSG00000143153 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000105707_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105707_fitted_models.rds + jobid: 14039 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105707_fitted_models.rds + wildcards: gene=ENSG00000105707 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000005961_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000005961_fitted_models.rds + jobid: 12434 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000005961_fitted_models.rds + wildcards: gene=ENSG00000005961 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000134153_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134153_fitted_models.rds + jobid: 10764 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134153_fitted_models.rds + wildcards: gene=ENSG00000134153 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000105323_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105323_fitted_models.rds + jobid: 14198 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105323_fitted_models.rds + wildcards: gene=ENSG00000105323 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198918_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198918_fitted_models.rds + jobid: 6466 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198918_fitted_models.rds + wildcards: gene=ENSG00000198918 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000174951_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000174951_fitted_models.rds + jobid: 14360 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000174951_fitted_models.rds + wildcards: gene=ENSG00000174951 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164199_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164199_fitted_models.rds + jobid: 4163 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164199_fitted_models.rds + wildcards: gene=ENSG00000164199 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000101182_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101182_fitted_models.rds + jobid: 13426 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101182_fitted_models.rds + wildcards: gene=ENSG00000101182 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000033800_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000033800_fitted_models.rds + jobid: 11000 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000033800_fitted_models.rds + wildcards: gene=ENSG00000033800 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163541_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163541_fitted_models.rds + jobid: 1886 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163541_fitted_models.rds + wildcards: gene=ENSG00000163541 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000144749_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000144749_fitted_models.rds + jobid: 2878 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000144749_fitted_models.rds + wildcards: gene=ENSG00000144749 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000140264_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140264_fitted_models.rds + jobid: 10849 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140264_fitted_models.rds + wildcards: gene=ENSG00000140264 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000110975_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000110975_fitted_models.rds + jobid: 9389 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000110975_fitted_models.rds + wildcards: gene=ENSG00000110975 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000136014_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136014_fitted_models.rds + jobid: 9717 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136014_fitted_models.rds + wildcards: gene=ENSG00000136014 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000008311_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000008311_fitted_models.rds + jobid: 5887 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000008311_fitted_models.rds + wildcards: gene=ENSG00000008311 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163932_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163932_fitted_models.rds + jobid: 2833 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163932_fitted_models.rds + wildcards: gene=ENSG00000163932 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000156467_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000156467_fitted_models.rds + jobid: 6960 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000156467_fitted_models.rds + wildcards: gene=ENSG00000156467 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000130821_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130821_fitted_models.rds + jobid: 6570 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130821_fitted_models.rds + wildcards: gene=ENSG00000130821 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000128463_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128463_fitted_models.rds + jobid: 10767 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128463_fitted_models.rds + wildcards: gene=ENSG00000128463 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000141971_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141971_fitted_models.rds + jobid: 13889 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141971_fitted_models.rds + wildcards: gene=ENSG00000141971 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000147676_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147676_fitted_models.rds + jobid: 7026 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147676_fitted_models.rds + wildcards: gene=ENSG00000147676 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000170315_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170315_fitted_models.rds + jobid: 12140 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170315_fitted_models.rds + wildcards: gene=ENSG00000170315 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000173404_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173404_fitted_models.rds + jobid: 13180 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173404_fitted_models.rds + wildcards: gene=ENSG00000173404 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167965_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167965_fitted_models.rds + jobid: 11296 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167965_fitted_models.rds + wildcards: gene=ENSG00000167965 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000254339_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000254339_fitted_models.rds + jobid: 7014 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000254339_fitted_models.rds + wildcards: gene=ENSG00000254339 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000149970_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000149970_fitted_models.rds + jobid: 6149 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000149970_fitted_models.rds + wildcards: gene=ENSG00000149970 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198171_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198171_fitted_models.rds + jobid: 13108 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198171_fitted_models.rds + wildcards: gene=ENSG00000198171 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000067048_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000067048_fitted_models.rds + jobid: 14628 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000067048_fitted_models.rds + wildcards: gene=ENSG00000067048 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198792_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198792_fitted_models.rds + jobid: 14858 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198792_fitted_models.rds + wildcards: gene=ENSG00000198792 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000272398_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000272398_fitted_models.rds + jobid: 5131 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000272398_fitted_models.rds + wildcards: gene=ENSG00000272398 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000015475_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000015475_fitted_models.rds + jobid: 14645 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000015475_fitted_models.rds + wildcards: gene=ENSG00000015475 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000142546_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142546_fitted_models.rds + jobid: 14393 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142546_fitted_models.rds + wildcards: gene=ENSG00000142546 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000152464_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000152464_fitted_models.rds + jobid: 8663 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000152464_fitted_models.rds + wildcards: gene=ENSG00000152464 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000145592_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145592_fitted_models.rds + jobid: 3997 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145592_fitted_models.rds + wildcards: gene=ENSG00000145592 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000160194_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160194_fitted_models.rds + jobid: 15123 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160194_fitted_models.rds + wildcards: gene=ENSG00000160194 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164022_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164022_fitted_models.rds + jobid: 3682 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164022_fitted_models.rds + wildcards: gene=ENSG00000164022 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000110057_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000110057_fitted_models.rds + jobid: 8274 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000110057_fitted_models.rds + wildcards: gene=ENSG00000110057 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000229271_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000229271_fitted_models.rds + jobid: 2581 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000229271_fitted_models.rds + wildcards: gene=ENSG00000229271 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000146223_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000146223_fitted_models.rds + jobid: 4943 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000146223_fitted_models.rds + wildcards: gene=ENSG00000146223 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198937_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198937_fitted_models.rds + jobid: 4907 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198937_fitted_models.rds + wildcards: gene=ENSG00000198937 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198841_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198841_fitted_models.rds + jobid: 550 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198841_fitted_models.rds + wildcards: gene=ENSG00000198841 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000165186_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165186_fitted_models.rds + jobid: 6153 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165186_fitted_models.rds + wildcards: gene=ENSG00000165186 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167552_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167552_fitted_models.rds + jobid: 9449 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167552_fitted_models.rds + wildcards: gene=ENSG00000167552 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000172270_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172270_fitted_models.rds + jobid: 13484 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172270_fitted_models.rds + wildcards: gene=ENSG00000172270 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167641_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167641_fitted_models.rds + jobid: 14123 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167641_fitted_models.rds + wildcards: gene=ENSG00000167641 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000160049_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160049_fitted_models.rds + jobid: 124 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160049_fitted_models.rds + wildcards: gene=ENSG00000160049 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000184014_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184014_fitted_models.rds + jobid: 7870 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184014_fitted_models.rds + wildcards: gene=ENSG00000184014 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000111843_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111843_fitted_models.rds + jobid: 4616 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111843_fitted_models.rds + wildcards: gene=ENSG00000111843 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163444_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163444_fitted_models.rds + jobid: 1268 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163444_fitted_models.rds + wildcards: gene=ENSG00000163444 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000162368_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162368_fitted_models.rds + jobid: 538 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162368_fitted_models.rds + wildcards: gene=ENSG00000162368 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000092010_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000092010_fitted_models.rds + jobid: 10305 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000092010_fitted_models.rds + wildcards: gene=ENSG00000092010 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000118181_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000118181_fitted_models.rds + jobid: 8519 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000118181_fitted_models.rds + wildcards: gene=ENSG00000118181 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000247095_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000247095_fitted_models.rds + jobid: 7783 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000247095_fitted_models.rds + wildcards: gene=ENSG00000247095 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000235688_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000235688_fitted_models.rds + jobid: 1513 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000235688_fitted_models.rds + wildcards: gene=ENSG00000235688 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000065621_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000065621_fitted_models.rds + jobid: 9066 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000065621_fitted_models.rds + wildcards: gene=ENSG00000065621 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164300_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164300_fitted_models.rds + jobid: 4130 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164300_fitted_models.rds + wildcards: gene=ENSG00000164300 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000251562_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000251562_fitted_models.rds + jobid: 8189 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000251562_fitted_models.rds + wildcards: gene=ENSG00000251562 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000152214_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000152214_fitted_models.rds + jobid: 12954 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000152214_fitted_models.rds + wildcards: gene=ENSG00000152214 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000275216_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000275216_fitted_models.rds + jobid: 10212 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000275216_fitted_models.rds + wildcards: gene=ENSG00000275216 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000170248_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170248_fitted_models.rds + jobid: 2626 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170248_fitted_models.rds + wildcards: gene=ENSG00000170248 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000160973_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160973_fitted_models.rds + jobid: 7153 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160973_fitted_models.rds + wildcards: gene=ENSG00000160973 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000168952_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168952_fitted_models.rds + jobid: 10326 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168952_fitted_models.rds + wildcards: gene=ENSG00000168952 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000257727_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000257727_fitted_models.rds + jobid: 9558 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000257727_fitted_models.rds + wildcards: gene=ENSG00000257727 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000105699_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105699_fitted_models.rds + jobid: 14045 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105699_fitted_models.rds + wildcards: gene=ENSG00000105699 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000102897_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102897_fitted_models.rds + jobid: 11462 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102897_fitted_models.rds + wildcards: gene=ENSG00000102897 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000110871_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000110871_fitted_models.rds + jobid: 9875 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000110871_fitted_models.rds + wildcards: gene=ENSG00000110871 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000119899_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119899_fitted_models.rds + jobid: 5045 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119899_fitted_models.rds + wildcards: gene=ENSG00000119899 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000166233_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166233_fitted_models.rds + jobid: 11023 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166233_fitted_models.rds + wildcards: gene=ENSG00000166233 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000121892_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000121892_fitted_models.rds + jobid: 3482 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000121892_fitted_models.rds + wildcards: gene=ENSG00000121892 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000171617_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171617_fitted_models.rds + jobid: 4098 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171617_fitted_models.rds + wildcards: gene=ENSG00000171617 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000061918_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000061918_fitted_models.rds + jobid: 3812 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000061918_fitted_models.rds + wildcards: gene=ENSG00000061918 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000130985_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130985_fitted_models.rds + jobid: 6202 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130985_fitted_models.rds + wildcards: gene=ENSG00000130985 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000186591_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000186591_fitted_models.rds + jobid: 5928 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000186591_fitted_models.rds + wildcards: gene=ENSG00000186591 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000132294_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132294_fitted_models.rds + jobid: 7068 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132294_fitted_models.rds + wildcards: gene=ENSG00000132294 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000271109_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000271109_fitted_models.rds + jobid: 14034 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000271109_fitted_models.rds + wildcards: gene=ENSG00000271109 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000087510_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000087510_fitted_models.rds + jobid: 13400 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000087510_fitted_models.rds + wildcards: gene=ENSG00000087510 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000159593_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000159593_fitted_models.rds + jobid: 11709 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000159593_fitted_models.rds + wildcards: gene=ENSG00000159593 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000108883_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108883_fitted_models.rds + jobid: 12442 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108883_fitted_models.rds + wildcards: gene=ENSG00000108883 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000152061_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000152061_fitted_models.rds + jobid: 1165 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000152061_fitted_models.rds + wildcards: gene=ENSG00000152061 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000182050_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182050_fitted_models.rds + jobid: 9690 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182050_fitted_models.rds + wildcards: gene=ENSG00000182050 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000196975_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196975_fitted_models.rds + jobid: 1815 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196975_fitted_models.rds + wildcards: gene=ENSG00000196975 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000043514_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000043514_fitted_models.rds + jobid: 437 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000043514_fitted_models.rds + wildcards: gene=ENSG00000043514 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000103260_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000103260_fitted_models.rds + jobid: 11243 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000103260_fitted_models.rds + wildcards: gene=ENSG00000103260 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000181163_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000181163_fitted_models.rds + jobid: 4474 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000181163_fitted_models.rds + wildcards: gene=ENSG00000181163 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000176014_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176014_fitted_models.rds + jobid: 12880 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176014_fitted_models.rds + wildcards: gene=ENSG00000176014 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000249915_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000249915_fitted_models.rds + jobid: 3900 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000249915_fitted_models.rds + wildcards: gene=ENSG00000249915 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000140553_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140553_fitted_models.rds + jobid: 11176 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140553_fitted_models.rds + wildcards: gene=ENSG00000140553 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000280707_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000280707_fitted_models.rds + jobid: 5340 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000280707_fitted_models.rds + wildcards: gene=ENSG00000280707 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000130202_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130202_fitted_models.rds + jobid: 14266 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130202_fitted_models.rds + wildcards: gene=ENSG00000130202 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000102804_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102804_fitted_models.rds + jobid: 10078 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102804_fitted_models.rds + wildcards: gene=ENSG00000102804 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000108950_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108950_fitted_models.rds + jobid: 12648 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108950_fitted_models.rds + wildcards: gene=ENSG00000108950 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000008382_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000008382_fitted_models.rds + jobid: 13601 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000008382_fitted_models.rds + wildcards: gene=ENSG00000008382 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000084073_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000084073_fitted_models.rds + jobid: 444 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000084073_fitted_models.rds + wildcards: gene=ENSG00000084073 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000075188_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000075188_fitted_models.rds + jobid: 9742 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000075188_fitted_models.rds + wildcards: gene=ENSG00000075188 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163682_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163682_fitted_models.rds + jobid: 3475 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163682_fitted_models.rds + wildcards: gene=ENSG00000163682 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000130638_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130638_fitted_models.rds + jobid: 14961 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130638_fitted_models.rds + wildcards: gene=ENSG00000130638 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000179912_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179912_fitted_models.rds + jobid: 9582 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179912_fitted_models.rds + wildcards: gene=ENSG00000179912 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000169710_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169710_fitted_models.rds + jobid: 12812 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169710_fitted_models.rds + wildcards: gene=ENSG00000169710 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000128040_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128040_fitted_models.rds + jobid: 3540 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128040_fitted_models.rds + wildcards: gene=ENSG00000128040 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000143947_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143947_fitted_models.rds + jobid: 1752 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143947_fitted_models.rds + wildcards: gene=ENSG00000143947 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000083097_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000083097_fitted_models.rds + jobid: 5069 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000083097_fitted_models.rds + wildcards: gene=ENSG00000083097 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000111450_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111450_fitted_models.rds + jobid: 9948 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111450_fitted_models.rds + wildcards: gene=ENSG00000111450 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000138778_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138778_fitted_models.rds + jobid: 3673 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138778_fitted_models.rds + wildcards: gene=ENSG00000138778 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000165512_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165512_fitted_models.rds + jobid: 8753 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165512_fitted_models.rds + wildcards: gene=ENSG00000165512 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000133606_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133606_fitted_models.rds + jobid: 5979 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133606_fitted_models.rds + wildcards: gene=ENSG00000133606 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198843_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198843_fitted_models.rds + jobid: 3148 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198843_fitted_models.rds + wildcards: gene=ENSG00000198843 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000140836_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140836_fitted_models.rds + jobid: 11813 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140836_fitted_models.rds + wildcards: gene=ENSG00000140836 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000128731_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128731_fitted_models.rds + jobid: 10745 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128731_fitted_models.rds + wildcards: gene=ENSG00000128731 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000165283_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165283_fitted_models.rds + jobid: 7277 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165283_fitted_models.rds + wildcards: gene=ENSG00000165283 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000144034_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000144034_fitted_models.rds + jobid: 1847 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000144034_fitted_models.rds + wildcards: gene=ENSG00000144034 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000129194_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000129194_fitted_models.rds + jobid: 12071 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000129194_fitted_models.rds + wildcards: gene=ENSG00000129194 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100297_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100297_fitted_models.rds + jobid: 14819 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100297_fitted_models.rds + wildcards: gene=ENSG00000100297 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000010404_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000010404_fitted_models.rds + jobid: 6543 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000010404_fitted_models.rds + wildcards: gene=ENSG00000010404 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000065328_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000065328_fitted_models.rds + jobid: 8649 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000065328_fitted_models.rds + wildcards: gene=ENSG00000065328 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000184897_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184897_fitted_models.rds + jobid: 3056 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184897_fitted_models.rds + wildcards: gene=ENSG00000184897 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000146386_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000146386_fitted_models.rds + jobid: 5257 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000146386_fitted_models.rds + wildcards: gene=ENSG00000146386 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000166199_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166199_fitted_models.rds + jobid: 7990 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166199_fitted_models.rds + wildcards: gene=ENSG00000166199 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000125285_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125285_fitted_models.rds + jobid: 10173 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125285_fitted_models.rds + wildcards: gene=ENSG00000125285 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000229637_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000229637_fitted_models.rds + jobid: 12491 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000229637_fitted_models.rds + wildcards: gene=ENSG00000229637 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000185453_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185453_fitted_models.rds + jobid: 14339 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185453_fitted_models.rds + wildcards: gene=ENSG00000185453 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000110429_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000110429_fitted_models.rds + jobid: 7968 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000110429_fitted_models.rds + wildcards: gene=ENSG00000110429 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000151718_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000151718_fitted_models.rds + jobid: 3865 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000151718_fitted_models.rds + wildcards: gene=ENSG00000151718 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000043355_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000043355_fitted_models.rds + jobid: 10195 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000043355_fitted_models.rds + wildcards: gene=ENSG00000043355 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000242715_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000242715_fitted_models.rds + jobid: 10043 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000242715_fitted_models.rds + wildcards: gene=ENSG00000242715 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000126264_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000126264_fitted_models.rds + jobid: 14069 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000126264_fitted_models.rds + wildcards: gene=ENSG00000126264 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000177034_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177034_fitted_models.rds + jobid: 4128 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177034_fitted_models.rds + wildcards: gene=ENSG00000177034 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000150401_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000150401_fitted_models.rds + jobid: 10231 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000150401_fitted_models.rds + wildcards: gene=ENSG00000150401 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000150961_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000150961_fitted_models.rds + jobid: 3717 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000150961_fitted_models.rds + wildcards: gene=ENSG00000150961 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000179010_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179010_fitted_models.rds + jobid: 3408 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179010_fitted_models.rds + wildcards: gene=ENSG00000179010 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000114942_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114942_fitted_models.rds + jobid: 2318 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114942_fitted_models.rds + wildcards: gene=ENSG00000114942 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000178852_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000178852_fitted_models.rds + jobid: 12475 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000178852_fitted_models.rds + wildcards: gene=ENSG00000178852 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000141933_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141933_fitted_models.rds + jobid: 13481 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141933_fitted_models.rds + wildcards: gene=ENSG00000141933 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000109881_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000109881_fitted_models.rds + jobid: 7943 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000109881_fitted_models.rds + wildcards: gene=ENSG00000109881 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000141002_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141002_fitted_models.rds + jobid: 11926 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141002_fitted_models.rds + wildcards: gene=ENSG00000141002 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000274893_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000274893_fitted_models.rds + jobid: 7333 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000274893_fitted_models.rds + wildcards: gene=ENSG00000274893 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000234444_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000234444_fitted_models.rds + jobid: 5594 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000234444_fitted_models.rds + wildcards: gene=ENSG00000234444 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000105668_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105668_fitted_models.rds + jobid: 14056 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105668_fitted_models.rds + wildcards: gene=ENSG00000105668 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000146416_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000146416_fitted_models.rds + jobid: 5263 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000146416_fitted_models.rds + wildcards: gene=ENSG00000146416 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000114850_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114850_fitted_models.rds + jobid: 3166 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114850_fitted_models.rds + wildcards: gene=ENSG00000114850 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000172115_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172115_fitted_models.rds + jobid: 5476 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172115_fitted_models.rds + wildcards: gene=ENSG00000172115 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000169905_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169905_fitted_models.rds + jobid: 1182 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169905_fitted_models.rds + wildcards: gene=ENSG00000169905 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000115128_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115128_fitted_models.rds + jobid: 1591 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115128_fitted_models.rds + wildcards: gene=ENSG00000115128 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000113657_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113657_fitted_models.rds + jobid: 4393 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113657_fitted_models.rds + wildcards: gene=ENSG00000113657 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000119042_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119042_fitted_models.rds + jobid: 2275 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119042_fitted_models.rds + wildcards: gene=ENSG00000119042 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000137700_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137700_fitted_models.rds + jobid: 8521 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137700_fitted_models.rds + wildcards: gene=ENSG00000137700 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167543_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167543_fitted_models.rds + jobid: 12236 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167543_fitted_models.rds + wildcards: gene=ENSG00000167543 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000102007_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102007_fitted_models.rds + jobid: 6239 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102007_fitted_models.rds + wildcards: gene=ENSG00000102007 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000180730_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000180730_fitted_models.rds + jobid: 10005 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000180730_fitted_models.rds + wildcards: gene=ENSG00000180730 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000111144_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111144_fitted_models.rds + jobid: 9719 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111144_fitted_models.rds + wildcards: gene=ENSG00000111144 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000135090_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135090_fitted_models.rds + jobid: 9852 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135090_fitted_models.rds + wildcards: gene=ENSG00000135090 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000143198_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143198_fitted_models.rds + jobid: 1121 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143198_fitted_models.rds + wildcards: gene=ENSG00000143198 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000118961_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000118961_fitted_models.rds + jobid: 1584 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000118961_fitted_models.rds + wildcards: gene=ENSG00000118961 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000114125_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114125_fitted_models.rds + jobid: 3115 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114125_fitted_models.rds + wildcards: gene=ENSG00000114125 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000072778_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000072778_fitted_models.rds + jobid: 12043 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000072778_fitted_models.rds + wildcards: gene=ENSG00000072778 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000112559_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112559_fitted_models.rds + jobid: 4925 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112559_fitted_models.rds + wildcards: gene=ENSG00000112559 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000105968_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105968_fitted_models.rds + jobid: 5564 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105968_fitted_models.rds + wildcards: gene=ENSG00000105968 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000168411_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168411_fitted_models.rds + jobid: 11818 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168411_fitted_models.rds + wildcards: gene=ENSG00000168411 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000250317_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000250317_fitted_models.rds + jobid: 3460 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000250317_fitted_models.rds + wildcards: gene=ENSG00000250317 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100749_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100749_fitted_models.rds + jobid: 10660 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100749_fitted_models.rds + wildcards: gene=ENSG00000100749 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000260896_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000260896_fitted_models.rds + jobid: 11843 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000260896_fitted_models.rds + wildcards: gene=ENSG00000260896 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000237651_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000237651_fitted_models.rds + jobid: 1771 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000237651_fitted_models.rds + wildcards: gene=ENSG00000237651 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000136371_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136371_fitted_models.rds + jobid: 11101 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136371_fitted_models.rds + wildcards: gene=ENSG00000136371 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000099364_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099364_fitted_models.rds + jobid: 11585 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099364_fitted_models.rds + wildcards: gene=ENSG00000099364 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000143303_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143303_fitted_models.rds + jobid: 1062 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143303_fitted_models.rds + wildcards: gene=ENSG00000143303 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000107581_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107581_fitted_models.rds + jobid: 9111 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107581_fitted_models.rds + wildcards: gene=ENSG00000107581 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000162769_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162769_fitted_models.rds + jobid: 1342 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162769_fitted_models.rds + wildcards: gene=ENSG00000162769 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163520_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163520_fitted_models.rds + jobid: 2555 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163520_fitted_models.rds + wildcards: gene=ENSG00000163520 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000277462_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000277462_fitted_models.rds + jobid: 1498 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000277462_fitted_models.rds + wildcards: gene=ENSG00000277462 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000162039_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162039_fitted_models.rds + jobid: 11276 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162039_fitted_models.rds + wildcards: gene=ENSG00000162039 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000168502_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168502_fitted_models.rds + jobid: 12864 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168502_fitted_models.rds + wildcards: gene=ENSG00000168502 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000067900_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000067900_fitted_models.rds + jobid: 12893 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000067900_fitted_models.rds + wildcards: gene=ENSG00000067900 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:41 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000130522_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130522_fitted_models.rds + jobid: 13912 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130522_fitted_models.rds + wildcards: gene=ENSG00000130522 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000174928_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000174928_fitted_models.rds + jobid: 3161 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000174928_fitted_models.rds + wildcards: gene=ENSG00000174928 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000196081_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196081_fitted_models.rds + jobid: 13983 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196081_fitted_models.rds + wildcards: gene=ENSG00000196081 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000077942_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000077942_fitted_models.rds + jobid: 14960 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000077942_fitted_models.rds + wildcards: gene=ENSG00000077942 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000156475_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000156475_fitted_models.rds + jobid: 4391 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000156475_fitted_models.rds + wildcards: gene=ENSG00000156475 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000156976_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000156976_fitted_models.rds + jobid: 3276 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000156976_fitted_models.rds + wildcards: gene=ENSG00000156976 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000102054_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102054_fitted_models.rds + jobid: 6133 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102054_fitted_models.rds + wildcards: gene=ENSG00000102054 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000150459_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000150459_fitted_models.rds + jobid: 9988 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000150459_fitted_models.rds + wildcards: gene=ENSG00000150459 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000151287_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000151287_fitted_models.rds + jobid: 10202 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000151287_fitted_models.rds + wildcards: gene=ENSG00000151287 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000101084_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101084_fitted_models.rds + jobid: 13272 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101084_fitted_models.rds + wildcards: gene=ENSG00000101084 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000126602_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000126602_fitted_models.rds + jobid: 11353 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000126602_fitted_models.rds + wildcards: gene=ENSG00000126602 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000006652_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000006652_fitted_models.rds + jobid: 5867 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000006652_fitted_models.rds + wildcards: gene=ENSG00000006652 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000136490_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136490_fitted_models.rds + jobid: 12608 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136490_fitted_models.rds + wildcards: gene=ENSG00000136490 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000090971_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000090971_fitted_models.rds + jobid: 14530 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000090971_fitted_models.rds + wildcards: gene=ENSG00000090971 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000180767_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000180767_fitted_models.rds + jobid: 3036 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000180767_fitted_models.rds + wildcards: gene=ENSG00000180767 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000172172_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172172_fitted_models.rds + jobid: 7032 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172172_fitted_models.rds + wildcards: gene=ENSG00000172172 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000283103_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000283103_fitted_models.rds + jobid: 14602 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000283103_fitted_models.rds + wildcards: gene=ENSG00000283103 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000174915_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000174915_fitted_models.rds + jobid: 7776 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000174915_fitted_models.rds + wildcards: gene=ENSG00000174915 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000128805_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128805_fitted_models.rds + jobid: 8767 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128805_fitted_models.rds + wildcards: gene=ENSG00000128805 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000007255_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000007255_fitted_models.rds + jobid: 14277 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000007255_fitted_models.rds + wildcards: gene=ENSG00000007255 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000009950_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000009950_fitted_models.rds + jobid: 5631 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000009950_fitted_models.rds + wildcards: gene=ENSG00000009950 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000244879_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000244879_fitted_models.rds + jobid: 10885 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000244879_fitted_models.rds + wildcards: gene=ENSG00000244879 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000118640_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000118640_fitted_models.rds + jobid: 1897 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000118640_fitted_models.rds + wildcards: gene=ENSG00000118640 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000159873_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000159873_fitted_models.rds + jobid: 14755 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000159873_fitted_models.rds + wildcards: gene=ENSG00000159873 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000165119_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165119_fitted_models.rds + jobid: 7381 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165119_fitted_models.rds + wildcards: gene=ENSG00000165119 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000072274_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000072274_fitted_models.rds + jobid: 3310 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000072274_fitted_models.rds + wildcards: gene=ENSG00000072274 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198231_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198231_fitted_models.rds + jobid: 12611 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198231_fitted_models.rds + wildcards: gene=ENSG00000198231 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000127314_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000127314_fitted_models.rds + jobid: 9639 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000127314_fitted_models.rds + wildcards: gene=ENSG00000127314 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000112304_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112304_fitted_models.rds + jobid: 4665 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112304_fitted_models.rds + wildcards: gene=ENSG00000112304 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198355_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198355_fitted_models.rds + jobid: 14979 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198355_fitted_models.rds + wildcards: gene=ENSG00000198355 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000166337_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166337_fitted_models.rds + jobid: 7851 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166337_fitted_models.rds + wildcards: gene=ENSG00000166337 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000112306_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112306_fitted_models.rds + jobid: 5231 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112306_fitted_models.rds + wildcards: gene=ENSG00000112306 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000133773_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133773_fitted_models.rds + jobid: 9682 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133773_fitted_models.rds + wildcards: gene=ENSG00000133773 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000106333_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106333_fitted_models.rds + jobid: 5784 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106333_fitted_models.rds + wildcards: gene=ENSG00000106333 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000161642_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000161642_fitted_models.rds + jobid: 9519 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000161642_fitted_models.rds + wildcards: gene=ENSG00000161642 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000130822_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130822_fitted_models.rds + jobid: 6569 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130822_fitted_models.rds + wildcards: gene=ENSG00000130822 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000249790_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000249790_fitted_models.rds + jobid: 9281 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000249790_fitted_models.rds + wildcards: gene=ENSG00000249790 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000170430_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170430_fitted_models.rds + jobid: 9157 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170430_fitted_models.rds + wildcards: gene=ENSG00000170430 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000181929_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000181929_fitted_models.rds + jobid: 9443 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000181929_fitted_models.rds + wildcards: gene=ENSG00000181929 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000106299_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106299_fitted_models.rds + jobid: 5894 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106299_fitted_models.rds + wildcards: gene=ENSG00000106299 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000175550_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175550_fitted_models.rds + jobid: 8213 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175550_fitted_models.rds + wildcards: gene=ENSG00000175550 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000233527_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000233527_fitted_models.rds + jobid: 14090 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000233527_fitted_models.rds + wildcards: gene=ENSG00000233527 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000142676_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142676_fitted_models.rds + jobid: 240 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142676_fitted_models.rds + wildcards: gene=ENSG00000142676 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000196544_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196544_fitted_models.rds + jobid: 12092 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196544_fitted_models.rds + wildcards: gene=ENSG00000196544 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000160678_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160678_fitted_models.rds + jobid: 967 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160678_fitted_models.rds + wildcards: gene=ENSG00000160678 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000021776_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000021776_fitted_models.rds + jobid: 10774 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000021776_fitted_models.rds + wildcards: gene=ENSG00000021776 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000105372_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105372_fitted_models.rds + jobid: 14206 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105372_fitted_models.rds + wildcards: gene=ENSG00000105372 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000197712_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197712_fitted_models.rds + jobid: 3471 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197712_fitted_models.rds + wildcards: gene=ENSG00000197712 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000125821_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125821_fitted_models.rds + jobid: 13174 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125821_fitted_models.rds + wildcards: gene=ENSG00000125821 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000138867_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138867_fitted_models.rds + jobid: 14728 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138867_fitted_models.rds + wildcards: gene=ENSG00000138867 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000052802_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000052802_fitted_models.rds + jobid: 3831 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000052802_fitted_models.rds + wildcards: gene=ENSG00000052802 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100129_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100129_fitted_models.rds + jobid: 14848 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100129_fitted_models.rds + wildcards: gene=ENSG00000100129 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000258405_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000258405_fitted_models.rds + jobid: 14463 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000258405_fitted_models.rds + wildcards: gene=ENSG00000258405 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000204899_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204899_fitted_models.rds + jobid: 10147 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204899_fitted_models.rds + wildcards: gene=ENSG00000204899 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000168303_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168303_fitted_models.rds + jobid: 5536 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168303_fitted_models.rds + wildcards: gene=ENSG00000168303 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000158863_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000158863_fitted_models.rds + jobid: 6685 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000158863_fitted_models.rds + wildcards: gene=ENSG00000158863 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000046653_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000046653_fitted_models.rds + jobid: 6118 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000046653_fitted_models.rds + wildcards: gene=ENSG00000046653 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000179091_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179091_fitted_models.rds + jobid: 7135 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179091_fitted_models.rds + wildcards: gene=ENSG00000179091 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000106400_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106400_fitted_models.rds + jobid: 5808 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106400_fitted_models.rds + wildcards: gene=ENSG00000106400 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000255062_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000255062_fitted_models.rds + jobid: 8576 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000255062_fitted_models.rds + wildcards: gene=ENSG00000255062 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000114019_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114019_fitted_models.rds + jobid: 3083 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114019_fitted_models.rds + wildcards: gene=ENSG00000114019 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000071889_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000071889_fitted_models.rds + jobid: 6598 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000071889_fitted_models.rds + wildcards: gene=ENSG00000071889 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000007402_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000007402_fitted_models.rds + jobid: 2790 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000007402_fitted_models.rds + wildcards: gene=ENSG00000007402 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000173207_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173207_fitted_models.rds + jobid: 999 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173207_fitted_models.rds + wildcards: gene=ENSG00000173207 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000223478_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000223478_fitted_models.rds + jobid: 7621 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000223478_fitted_models.rds + wildcards: gene=ENSG00000223478 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000108424_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108424_fitted_models.rds + jobid: 12477 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108424_fitted_models.rds + wildcards: gene=ENSG00000108424 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000166226_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166226_fitted_models.rds + jobid: 9647 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166226_fitted_models.rds + wildcards: gene=ENSG00000166226 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000088305_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000088305_fitted_models.rds + jobid: 13223 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000088305_fitted_models.rds + wildcards: gene=ENSG00000088305 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000105655_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105655_fitted_models.rds + jobid: 13917 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105655_fitted_models.rds + wildcards: gene=ENSG00000105655 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000173726_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173726_fitted_models.rds + jobid: 1455 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173726_fitted_models.rds + wildcards: gene=ENSG00000173726 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000173692_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173692_fitted_models.rds + jobid: 2426 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173692_fitted_models.rds + wildcards: gene=ENSG00000173692 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164176_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164176_fitted_models.rds + jobid: 4149 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164176_fitted_models.rds + wildcards: gene=ENSG00000164176 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000137880_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137880_fitted_models.rds + jobid: 10806 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137880_fitted_models.rds + wildcards: gene=ENSG00000137880 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000171940_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171940_fitted_models.rds + jobid: 13392 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171940_fitted_models.rds + wildcards: gene=ENSG00000171940 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000112531_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112531_fitted_models.rds + jobid: 5332 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112531_fitted_models.rds + wildcards: gene=ENSG00000112531 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000281881_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000281881_fitted_models.rds + jobid: 4382 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000281881_fitted_models.rds + wildcards: gene=ENSG00000281881 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000099203_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099203_fitted_models.rds + jobid: 13739 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099203_fitted_models.rds + wildcards: gene=ENSG00000099203 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000142089_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142089_fitted_models.rds + jobid: 7771 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142089_fitted_models.rds + wildcards: gene=ENSG00000142089 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000197444_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197444_fitted_models.rds + jobid: 8770 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197444_fitted_models.rds + wildcards: gene=ENSG00000197444 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000126768_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000126768_fitted_models.rds + jobid: 6226 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000126768_fitted_models.rds + wildcards: gene=ENSG00000126768 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000140320_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140320_fitted_models.rds + jobid: 10799 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140320_fitted_models.rds + wildcards: gene=ENSG00000140320 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000149212_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000149212_fitted_models.rds + jobid: 8417 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000149212_fitted_models.rds + wildcards: gene=ENSG00000149212 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000058668_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000058668_fitted_models.rds + jobid: 1273 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000058668_fitted_models.rds + wildcards: gene=ENSG00000058668 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000156411_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000156411_fitted_models.rds + jobid: 10705 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000156411_fitted_models.rds + wildcards: gene=ENSG00000156411 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000180953_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000180953_fitted_models.rds + jobid: 11102 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000180953_fitted_models.rds + wildcards: gene=ENSG00000180953 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000123892_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000123892_fitted_models.rds + jobid: 8395 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000123892_fitted_models.rds + wildcards: gene=ENSG00000123892 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000177971_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177971_fitted_models.rds + jobid: 11069 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177971_fitted_models.rds + wildcards: gene=ENSG00000177971 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000146476_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000146476_fitted_models.rds + jobid: 5296 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000146476_fitted_models.rds + wildcards: gene=ENSG00000146476 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000125743_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125743_fitted_models.rds + jobid: 14291 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125743_fitted_models.rds + wildcards: gene=ENSG00000125743 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000170291_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170291_fitted_models.rds + jobid: 12048 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170291_fitted_models.rds + wildcards: gene=ENSG00000170291 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000232119_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000232119_fitted_models.rds + jobid: 6477 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000232119_fitted_models.rds + wildcards: gene=ENSG00000232119 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000070669_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000070669_fitted_models.rds + jobid: 5730 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000070669_fitted_models.rds + wildcards: gene=ENSG00000070669 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000107371_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107371_fitted_models.rds + jobid: 7313 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107371_fitted_models.rds + wildcards: gene=ENSG00000107371 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000158483_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000158483_fitted_models.rds + jobid: 8303 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000158483_fitted_models.rds + wildcards: gene=ENSG00000158483 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000116199_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116199_fitted_models.rds + jobid: 1178 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116199_fitted_models.rds + wildcards: gene=ENSG00000116199 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000115226_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115226_fitted_models.rds + jobid: 1640 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115226_fitted_models.rds + wildcards: gene=ENSG00000115226 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000237742_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000237742_fitted_models.rds + jobid: 5207 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000237742_fitted_models.rds + wildcards: gene=ENSG00000237742 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000228223_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000228223_fitted_models.rds + jobid: 4701 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000228223_fitted_models.rds + wildcards: gene=ENSG00000228223 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000171497_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171497_fitted_models.rds + jobid: 3818 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171497_fitted_models.rds + wildcards: gene=ENSG00000171497 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000186230_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000186230_fitted_models.rds + jobid: 14567 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000186230_fitted_models.rds + wildcards: gene=ENSG00000186230 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000130177_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130177_fitted_models.rds + jobid: 10237 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130177_fitted_models.rds + wildcards: gene=ENSG00000130177 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000079739_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000079739_fitted_models.rds + jobid: 610 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000079739_fitted_models.rds + wildcards: gene=ENSG00000079739 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000169189_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169189_fitted_models.rds + jobid: 11498 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169189_fitted_models.rds + wildcards: gene=ENSG00000169189 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000122550_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000122550_fitted_models.rds + jobid: 5463 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000122550_fitted_models.rds + wildcards: gene=ENSG00000122550 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000129003_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000129003_fitted_models.rds + jobid: 10941 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000129003_fitted_models.rds + wildcards: gene=ENSG00000129003 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000179958_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179958_fitted_models.rds + jobid: 11564 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179958_fitted_models.rds + wildcards: gene=ENSG00000179958 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000223891_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000223891_fitted_models.rds + jobid: 13310 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000223891_fitted_models.rds + wildcards: gene=ENSG00000223891 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000101751_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101751_fitted_models.rds + jobid: 12988 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101751_fitted_models.rds + wildcards: gene=ENSG00000101751 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000143742_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143742_fitted_models.rds + jobid: 1387 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143742_fitted_models.rds + wildcards: gene=ENSG00000143742 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000152082_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000152082_fitted_models.rds + jobid: 2073 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000152082_fitted_models.rds + wildcards: gene=ENSG00000152082 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000188177_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188177_fitted_models.rds + jobid: 2016 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188177_fitted_models.rds + wildcards: gene=ENSG00000188177 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164366_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164366_fitted_models.rds + jobid: 3898 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164366_fitted_models.rds + wildcards: gene=ENSG00000164366 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000106682_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106682_fitted_models.rds + jobid: 5642 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106682_fitted_models.rds + wildcards: gene=ENSG00000106682 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000146830_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000146830_fitted_models.rds + jobid: 5789 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000146830_fitted_models.rds + wildcards: gene=ENSG00000146830 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100522_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100522_fitted_models.rds + jobid: 10415 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100522_fitted_models.rds + wildcards: gene=ENSG00000100522 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000120306_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000120306_fitted_models.rds + jobid: 4337 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000120306_fitted_models.rds + wildcards: gene=ENSG00000120306 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000168393_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168393_fitted_models.rds + jobid: 2493 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168393_fitted_models.rds + wildcards: gene=ENSG00000168393 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000160813_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160813_fitted_models.rds + jobid: 5776 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160813_fitted_models.rds + wildcards: gene=ENSG00000160813 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000102265_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102265_fitted_models.rds + jobid: 6209 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102265_fitted_models.rds + wildcards: gene=ENSG00000102265 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000109390_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000109390_fitted_models.rds + jobid: 3757 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000109390_fitted_models.rds + wildcards: gene=ENSG00000109390 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000073578_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000073578_fitted_models.rds + jobid: 3899 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000073578_fitted_models.rds + wildcards: gene=ENSG00000073578 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000206140_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000206140_fitted_models.rds + jobid: 14693 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000206140_fitted_models.rds + wildcards: gene=ENSG00000206140 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000127022_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000127022_fitted_models.rds + jobid: 4548 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000127022_fitted_models.rds + wildcards: gene=ENSG00000127022 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000115109_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115109_fitted_models.rds + jobid: 2044 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115109_fitted_models.rds + wildcards: gene=ENSG00000115109 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000224877_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000224877_fitted_models.rds + jobid: 12773 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000224877_fitted_models.rds + wildcards: gene=ENSG00000224877 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000145012_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145012_fitted_models.rds + jobid: 3284 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145012_fitted_models.rds + wildcards: gene=ENSG00000145012 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000130768_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130768_fitted_models.rds + jobid: 311 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130768_fitted_models.rds + wildcards: gene=ENSG00000130768 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000116691_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116691_fitted_models.rds + jobid: 147 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116691_fitted_models.rds + wildcards: gene=ENSG00000116691 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198563_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198563_fitted_models.rds + jobid: 4787 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198563_fitted_models.rds + wildcards: gene=ENSG00000198563 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164587_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164587_fitted_models.rds + jobid: 4413 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164587_fitted_models.rds + wildcards: gene=ENSG00000164587 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000170653_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170653_fitted_models.rds + jobid: 9511 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170653_fitted_models.rds + wildcards: gene=ENSG00000170653 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000183520_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183520_fitted_models.rds + jobid: 424 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183520_fitted_models.rds + wildcards: gene=ENSG00000183520 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000061676_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000061676_fitted_models.rds + jobid: 2229 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000061676_fitted_models.rds + wildcards: gene=ENSG00000061676 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000081181_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000081181_fitted_models.rds + jobid: 10500 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000081181_fitted_models.rds + wildcards: gene=ENSG00000081181 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000074219_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000074219_fitted_models.rds + jobid: 14380 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000074219_fitted_models.rds + wildcards: gene=ENSG00000074219 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000166012_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166012_fitted_models.rds + jobid: 8404 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166012_fitted_models.rds + wildcards: gene=ENSG00000166012 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000104341_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104341_fitted_models.rds + jobid: 6967 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104341_fitted_models.rds + wildcards: gene=ENSG00000104341 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000155755_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000155755_fitted_models.rds + jobid: 2296 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000155755_fitted_models.rds + wildcards: gene=ENSG00000155755 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000122515_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000122515_fitted_models.rds + jobid: 5562 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000122515_fitted_models.rds + wildcards: gene=ENSG00000122515 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000131203_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131203_fitted_models.rds + jobid: 6785 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131203_fitted_models.rds + wildcards: gene=ENSG00000131203 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000148143_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000148143_fitted_models.rds + jobid: 7480 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000148143_fitted_models.rds + wildcards: gene=ENSG00000148143 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000074356_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000074356_fitted_models.rds + jobid: 11982 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000074356_fitted_models.rds + wildcards: gene=ENSG00000074356 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000109180_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000109180_fitted_models.rds + jobid: 3511 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000109180_fitted_models.rds + wildcards: gene=ENSG00000109180 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000141756_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141756_fitted_models.rds + jobid: 12358 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141756_fitted_models.rds + wildcards: gene=ENSG00000141756 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000141298_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141298_fitted_models.rds + jobid: 12240 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141298_fitted_models.rds + wildcards: gene=ENSG00000141298 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000117707_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117707_fitted_models.rds + jobid: 1346 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117707_fitted_models.rds + wildcards: gene=ENSG00000117707 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000128739_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128739_fitted_models.rds + jobid: 10736 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128739_fitted_models.rds + wildcards: gene=ENSG00000128739 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000122861_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000122861_fitted_models.rds + jobid: 8874 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000122861_fitted_models.rds + wildcards: gene=ENSG00000122861 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000148399_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000148399_fitted_models.rds + jobid: 7756 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000148399_fitted_models.rds + wildcards: gene=ENSG00000148399 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000171055_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171055_fitted_models.rds + jobid: 1674 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171055_fitted_models.rds + wildcards: gene=ENSG00000171055 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000042753_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000042753_fitted_models.rds + jobid: 14317 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000042753_fitted_models.rds + wildcards: gene=ENSG00000042753 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000213246_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000213246_fitted_models.rds + jobid: 12564 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000213246_fitted_models.rds + wildcards: gene=ENSG00000213246 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164054_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164054_fitted_models.rds + jobid: 2727 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164054_fitted_models.rds + wildcards: gene=ENSG00000164054 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198258_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198258_fitted_models.rds + jobid: 13704 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198258_fitted_models.rds + wildcards: gene=ENSG00000198258 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000225177_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000225177_fitted_models.rds + jobid: 5253 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000225177_fitted_models.rds + wildcards: gene=ENSG00000225177 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000132846_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132846_fitted_models.rds + jobid: 4113 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132846_fitted_models.rds + wildcards: gene=ENSG00000132846 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164880_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164880_fitted_models.rds + jobid: 5376 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164880_fitted_models.rds + wildcards: gene=ENSG00000164880 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000122034_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000122034_fitted_models.rds + jobid: 10013 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000122034_fitted_models.rds + wildcards: gene=ENSG00000122034 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000105278_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105278_fitted_models.rds + jobid: 13585 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105278_fitted_models.rds + wildcards: gene=ENSG00000105278 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000114503_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114503_fitted_models.rds + jobid: 3324 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114503_fitted_models.rds + wildcards: gene=ENSG00000114503 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000162772_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162772_fitted_models.rds + jobid: 1337 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162772_fitted_models.rds + wildcards: gene=ENSG00000162772 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000131495_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131495_fitted_models.rds + jobid: 4344 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131495_fitted_models.rds + wildcards: gene=ENSG00000131495 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000172785_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172785_fitted_models.rds + jobid: 7172 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172785_fitted_models.rds + wildcards: gene=ENSG00000172785 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000153944_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153944_fitted_models.rds + jobid: 12553 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153944_fitted_models.rds + wildcards: gene=ENSG00000153944 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000166347_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166347_fitted_models.rds + jobid: 13041 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166347_fitted_models.rds + wildcards: gene=ENSG00000166347 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000063177_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000063177_fitted_models.rds + jobid: 14353 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000063177_fitted_models.rds + wildcards: gene=ENSG00000063177 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000116649_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116649_fitted_models.rds + jobid: 128 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116649_fitted_models.rds + wildcards: gene=ENSG00000116649 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000197063_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197063_fitted_models.rds + jobid: 12800 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197063_fitted_models.rds + wildcards: gene=ENSG00000197063 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000186523_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000186523_fitted_models.rds + jobid: 6655 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000186523_fitted_models.rds + wildcards: gene=ENSG00000186523 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000089009_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000089009_fitted_models.rds + jobid: 9822 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000089009_fitted_models.rds + wildcards: gene=ENSG00000089009 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000101363_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101363_fitted_models.rds + jobid: 13281 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101363_fitted_models.rds + wildcards: gene=ENSG00000101363 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000074800_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000074800_fitted_models.rds + jobid: 103 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000074800_fitted_models.rds + wildcards: gene=ENSG00000074800 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000176928_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176928_fitted_models.rds + jobid: 4104 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176928_fitted_models.rds + wildcards: gene=ENSG00000176928 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:42 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000173715_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173715_fitted_models.rds + jobid: 8249 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173715_fitted_models.rds + wildcards: gene=ENSG00000173715 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000115946_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115946_fitted_models.rds + jobid: 1802 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115946_fitted_models.rds + wildcards: gene=ENSG00000115946 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000185274_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185274_fitted_models.rds + jobid: 5620 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185274_fitted_models.rds + wildcards: gene=ENSG00000185274 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000007264_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000007264_fitted_models.rds + jobid: 13584 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000007264_fitted_models.rds + wildcards: gene=ENSG00000007264 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000280623_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000280623_fitted_models.rds + jobid: 14710 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000280623_fitted_models.rds + wildcards: gene=ENSG00000280623 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000181061_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000181061_fitted_models.rds + jobid: 2667 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000181061_fitted_models.rds + wildcards: gene=ENSG00000181061 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000124374_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124374_fitted_models.rds + jobid: 1833 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124374_fitted_models.rds + wildcards: gene=ENSG00000124374 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000148291_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000148291_fitted_models.rds + jobid: 7682 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000148291_fitted_models.rds + wildcards: gene=ENSG00000148291 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000083444_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000083444_fitted_models.rds + jobid: 145 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000083444_fitted_models.rds + wildcards: gene=ENSG00000083444 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000143499_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143499_fitted_models.rds + jobid: 1347 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143499_fitted_models.rds + wildcards: gene=ENSG00000143499 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000015532_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000015532_fitted_models.rds + jobid: 12518 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000015532_fitted_models.rds + wildcards: gene=ENSG00000015532 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000187017_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000187017_fitted_models.rds + jobid: 86 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000187017_fitted_models.rds + wildcards: gene=ENSG00000187017 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000213465_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000213465_fitted_models.rds + jobid: 8170 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000213465_fitted_models.rds + wildcards: gene=ENSG00000213465 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000188343_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188343_fitted_models.rds + jobid: 6942 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188343_fitted_models.rds + wildcards: gene=ENSG00000188343 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000147202_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147202_fitted_models.rds + jobid: 6372 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147202_fitted_models.rds + wildcards: gene=ENSG00000147202 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000129103_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000129103_fitted_models.rds + jobid: 5591 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000129103_fitted_models.rds + wildcards: gene=ENSG00000129103 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000055950_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000055950_fitted_models.rds + jobid: 9017 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000055950_fitted_models.rds + wildcards: gene=ENSG00000055950 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100650_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100650_fitted_models.rds + jobid: 10514 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100650_fitted_models.rds + wildcards: gene=ENSG00000100650 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000183765_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183765_fitted_models.rds + jobid: 14753 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183765_fitted_models.rds + wildcards: gene=ENSG00000183765 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000141367_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141367_fitted_models.rds + jobid: 12580 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141367_fitted_models.rds + wildcards: gene=ENSG00000141367 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000196932_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196932_fitted_models.rds + jobid: 8794 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196932_fitted_models.rds + wildcards: gene=ENSG00000196932 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000196950_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196950_fitted_models.rds + jobid: 2261 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196950_fitted_models.rds + wildcards: gene=ENSG00000196950 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000185630_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185630_fitted_models.rds + jobid: 1120 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185630_fitted_models.rds + wildcards: gene=ENSG00000185630 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000156675_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000156675_fitted_models.rds + jobid: 6769 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000156675_fitted_models.rds + wildcards: gene=ENSG00000156675 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000099284_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099284_fitted_models.rds + jobid: 8829 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099284_fitted_models.rds + wildcards: gene=ENSG00000099284 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000189227_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000189227_fitted_models.rds + jobid: 10998 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000189227_fitted_models.rds + wildcards: gene=ENSG00000189227 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000134419_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134419_fitted_models.rds + jobid: 11441 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134419_fitted_models.rds + wildcards: gene=ENSG00000134419 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000106105_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106105_fitted_models.rds + jobid: 5503 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106105_fitted_models.rds + wildcards: gene=ENSG00000106105 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000185963_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185963_fitted_models.rds + jobid: 7410 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185963_fitted_models.rds + wildcards: gene=ENSG00000185963 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000049769_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000049769_fitted_models.rds + jobid: 6244 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000049769_fitted_models.rds + wildcards: gene=ENSG00000049769 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000185658_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185658_fitted_models.rds + jobid: 15098 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185658_fitted_models.rds + wildcards: gene=ENSG00000185658 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000263470_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000263470_fitted_models.rds + jobid: 12628 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000263470_fitted_models.rds + wildcards: gene=ENSG00000263470 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000171444_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171444_fitted_models.rds + jobid: 4217 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171444_fitted_models.rds + wildcards: gene=ENSG00000171444 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000148908_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000148908_fitted_models.rds + jobid: 9116 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000148908_fitted_models.rds + wildcards: gene=ENSG00000148908 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000179750_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179750_fitted_models.rds + jobid: 14874 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179750_fitted_models.rds + wildcards: gene=ENSG00000179750 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000122335_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000122335_fitted_models.rds + jobid: 5313 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000122335_fitted_models.rds + wildcards: gene=ENSG00000122335 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000226091_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000226091_fitted_models.rds + jobid: 9279 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000226091_fitted_models.rds + wildcards: gene=ENSG00000226091 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163902_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163902_fitted_models.rds + jobid: 3047 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163902_fitted_models.rds + wildcards: gene=ENSG00000163902 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000003989_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000003989_fitted_models.rds + jobid: 6668 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000003989_fitted_models.rds + wildcards: gene=ENSG00000003989 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000196262_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196262_fitted_models.rds + jobid: 5563 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196262_fitted_models.rds + wildcards: gene=ENSG00000196262 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000026025_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000026025_fitted_models.rds + jobid: 8671 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000026025_fitted_models.rds + wildcards: gene=ENSG00000026025 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000180573_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000180573_fitted_models.rds + jobid: 4680 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000180573_fitted_models.rds + wildcards: gene=ENSG00000180573 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000105255_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105255_fitted_models.rds + jobid: 13599 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105255_fitted_models.rds + wildcards: gene=ENSG00000105255 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000099995_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099995_fitted_models.rds + jobid: 14779 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099995_fitted_models.rds + wildcards: gene=ENSG00000099995 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000183891_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183891_fitted_models.rds + jobid: 1576 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183891_fitted_models.rds + wildcards: gene=ENSG00000183891 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198886_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198886_fitted_models.rds + jobid: 15180 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198886_fitted_models.rds + wildcards: gene=ENSG00000198886 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000196154_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196154_fitted_models.rds + jobid: 963 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196154_fitted_models.rds + wildcards: gene=ENSG00000196154 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000205358_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000205358_fitted_models.rds + jobid: 11665 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000205358_fitted_models.rds + wildcards: gene=ENSG00000205358 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000139428_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000139428_fitted_models.rds + jobid: 9786 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000139428_fitted_models.rds + wildcards: gene=ENSG00000139428 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000182899_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182899_fitted_models.rds + jobid: 3334 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182899_fitted_models.rds + wildcards: gene=ENSG00000182899 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000168004_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168004_fitted_models.rds + jobid: 8125 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168004_fitted_models.rds + wildcards: gene=ENSG00000168004 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000088035_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000088035_fitted_models.rds + jobid: 607 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000088035_fitted_models.rds + wildcards: gene=ENSG00000088035 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000247134_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000247134_fitted_models.rds + jobid: 6756 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000247134_fitted_models.rds + wildcards: gene=ENSG00000247134 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000134775_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134775_fitted_models.rds + jobid: 12947 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134775_fitted_models.rds + wildcards: gene=ENSG00000134775 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000173436_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173436_fitted_models.rds + jobid: 202 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173436_fitted_models.rds + wildcards: gene=ENSG00000173436 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000113732_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113732_fitted_models.rds + jobid: 4484 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113732_fitted_models.rds + wildcards: gene=ENSG00000113732 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000149782_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000149782_fitted_models.rds + jobid: 8148 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000149782_fitted_models.rds + wildcards: gene=ENSG00000149782 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000169783_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169783_fitted_models.rds + jobid: 11084 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169783_fitted_models.rds + wildcards: gene=ENSG00000169783 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000143494_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143494_fitted_models.rds + jobid: 1343 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143494_fitted_models.rds + wildcards: gene=ENSG00000143494 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000103044_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000103044_fitted_models.rds + jobid: 11769 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000103044_fitted_models.rds + wildcards: gene=ENSG00000103044 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000006530_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000006530_fitted_models.rds + jobid: 5987 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000006530_fitted_models.rds + wildcards: gene=ENSG00000006530 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000116106_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116106_fitted_models.rds + jobid: 2401 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116106_fitted_models.rds + wildcards: gene=ENSG00000116106 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000139675_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000139675_fitted_models.rds + jobid: 10136 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000139675_fitted_models.rds + wildcards: gene=ENSG00000139675 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000213654_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000213654_fitted_models.rds + jobid: 4825 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000213654_fitted_models.rds + wildcards: gene=ENSG00000213654 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000147251_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147251_fitted_models.rds + jobid: 6455 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147251_fitted_models.rds + wildcards: gene=ENSG00000147251 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000114446_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114446_fitted_models.rds + jobid: 2948 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114446_fitted_models.rds + wildcards: gene=ENSG00000114446 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000166164_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166164_fitted_models.rds + jobid: 11636 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166164_fitted_models.rds + wildcards: gene=ENSG00000166164 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000169738_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169738_fitted_models.rds + jobid: 12807 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169738_fitted_models.rds + wildcards: gene=ENSG00000169738 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000105248_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105248_fitted_models.rds + jobid: 13596 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105248_fitted_models.rds + wildcards: gene=ENSG00000105248 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164251_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164251_fitted_models.rds + jobid: 4111 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164251_fitted_models.rds + wildcards: gene=ENSG00000164251 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000162545_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162545_fitted_models.rds + jobid: 209 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162545_fitted_models.rds + wildcards: gene=ENSG00000162545 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000182117_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182117_fitted_models.rds + jobid: 10769 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182117_fitted_models.rds + wildcards: gene=ENSG00000182117 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000079459_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000079459_fitted_models.rds + jobid: 6652 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000079459_fitted_models.rds + wildcards: gene=ENSG00000079459 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000130303_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130303_fitted_models.rds + jobid: 13887 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130303_fitted_models.rds + wildcards: gene=ENSG00000130303 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000179862_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179862_fitted_models.rds + jobid: 455 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179862_fitted_models.rds + wildcards: gene=ENSG00000179862 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000128016_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128016_fitted_models.rds + jobid: 14157 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128016_fitted_models.rds + wildcards: gene=ENSG00000128016 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000103035_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000103035_fitted_models.rds + jobid: 11814 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000103035_fitted_models.rds + wildcards: gene=ENSG00000103035 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000126267_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000126267_fitted_models.rds + jobid: 14055 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000126267_fitted_models.rds + wildcards: gene=ENSG00000126267 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100603_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100603_fitted_models.rds + jobid: 10590 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100603_fitted_models.rds + wildcards: gene=ENSG00000100603 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100764_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100764_fitted_models.rds + jobid: 10610 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100764_fitted_models.rds + wildcards: gene=ENSG00000100764 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000197912_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197912_fitted_models.rds + jobid: 11912 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197912_fitted_models.rds + wildcards: gene=ENSG00000197912 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000106049_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106049_fitted_models.rds + jobid: 5486 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106049_fitted_models.rds + wildcards: gene=ENSG00000106049 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000270022_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000270022_fitted_models.rds + jobid: 14932 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000270022_fitted_models.rds + wildcards: gene=ENSG00000270022 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000146904_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000146904_fitted_models.rds + jobid: 6003 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000146904_fitted_models.rds + wildcards: gene=ENSG00000146904 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000114631_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114631_fitted_models.rds + jobid: 3042 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114631_fitted_models.rds + wildcards: gene=ENSG00000114631 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000106443_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106443_fitted_models.rds + jobid: 5434 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106443_fitted_models.rds + wildcards: gene=ENSG00000106443 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000060339_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000060339_fitted_models.rds + jobid: 8817 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000060339_fitted_models.rds + wildcards: gene=ENSG00000060339 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000255857_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000255857_fitted_models.rds + jobid: 9865 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000255857_fitted_models.rds + wildcards: gene=ENSG00000255857 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100979_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100979_fitted_models.rds + jobid: 13341 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100979_fitted_models.rds + wildcards: gene=ENSG00000100979 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000197462_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197462_fitted_models.rds + jobid: 5901 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197462_fitted_models.rds + wildcards: gene=ENSG00000197462 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000011105_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000011105_fitted_models.rds + jobid: 9206 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000011105_fitted_models.rds + wildcards: gene=ENSG00000011105 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000107968_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107968_fitted_models.rds + jobid: 8715 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107968_fitted_models.rds + wildcards: gene=ENSG00000107968 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000170638_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170638_fitted_models.rds + jobid: 14981 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170638_fitted_models.rds + wildcards: gene=ENSG00000170638 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000235169_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000235169_fitted_models.rds + jobid: 69 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000235169_fitted_models.rds + wildcards: gene=ENSG00000235169 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000231500_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000231500_fitted_models.rds + jobid: 4848 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000231500_fitted_models.rds + wildcards: gene=ENSG00000231500 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000113580_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113580_fitted_models.rds + jobid: 4385 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113580_fitted_models.rds + wildcards: gene=ENSG00000113580 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000145354_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145354_fitted_models.rds + jobid: 3669 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145354_fitted_models.rds + wildcards: gene=ENSG00000145354 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000197958_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197958_fitted_models.rds + jobid: 7583 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197958_fitted_models.rds + wildcards: gene=ENSG00000197958 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000176887_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176887_fitted_models.rds + jobid: 1526 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176887_fitted_models.rds + wildcards: gene=ENSG00000176887 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000203995_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000203995_fitted_models.rds + jobid: 561 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000203995_fitted_models.rds + wildcards: gene=ENSG00000203995 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000166136_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166136_fitted_models.rds + jobid: 9013 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166136_fitted_models.rds + wildcards: gene=ENSG00000166136 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000186575_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000186575_fitted_models.rds + jobid: 14770 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000186575_fitted_models.rds + wildcards: gene=ENSG00000186575 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000213463_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000213463_fitted_models.rds + jobid: 10517 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000213463_fitted_models.rds + wildcards: gene=ENSG00000213463 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000125755_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125755_fitted_models.rds + jobid: 14297 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125755_fitted_models.rds + wildcards: gene=ENSG00000125755 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000131467_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131467_fitted_models.rds + jobid: 12397 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131467_fitted_models.rds + wildcards: gene=ENSG00000131467 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000172830_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172830_fitted_models.rds + jobid: 8259 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172830_fitted_models.rds + wildcards: gene=ENSG00000172830 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000170889_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170889_fitted_models.rds + jobid: 14503 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170889_fitted_models.rds + wildcards: gene=ENSG00000170889 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000129354_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000129354_fitted_models.rds + jobid: 13733 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000129354_fitted_models.rds + wildcards: gene=ENSG00000129354 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000050426_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000050426_fitted_models.rds + jobid: 9474 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000050426_fitted_models.rds + wildcards: gene=ENSG00000050426 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000165113_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165113_fitted_models.rds + jobid: 7378 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165113_fitted_models.rds + wildcards: gene=ENSG00000165113 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000135736_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135736_fitted_models.rds + jobid: 11679 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135736_fitted_models.rds + wildcards: gene=ENSG00000135736 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000104915_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104915_fitted_models.rds + jobid: 13816 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104915_fitted_models.rds + wildcards: gene=ENSG00000104915 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000231789_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000231789_fitted_models.rds + jobid: 113 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000231789_fitted_models.rds + wildcards: gene=ENSG00000231789 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000148798_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000148798_fitted_models.rds + jobid: 9054 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000148798_fitted_models.rds + wildcards: gene=ENSG00000148798 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000166900_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166900_fitted_models.rds + jobid: 8062 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166900_fitted_models.rds + wildcards: gene=ENSG00000166900 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000111057_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111057_fitted_models.rds + jobid: 9490 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111057_fitted_models.rds + wildcards: gene=ENSG00000111057 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000149196_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000149196_fitted_models.rds + jobid: 8389 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000149196_fitted_models.rds + wildcards: gene=ENSG00000149196 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000128923_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128923_fitted_models.rds + jobid: 10929 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128923_fitted_models.rds + wildcards: gene=ENSG00000128923 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000105397_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105397_fitted_models.rds + jobid: 13725 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105397_fitted_models.rds + wildcards: gene=ENSG00000105397 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000187801_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000187801_fitted_models.rds + jobid: 447 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000187801_fitted_models.rds + wildcards: gene=ENSG00000187801 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000178896_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000178896_fitted_models.rds + jobid: 7133 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000178896_fitted_models.rds + wildcards: gene=ENSG00000178896 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000173156_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173156_fitted_models.rds + jobid: 8255 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173156_fitted_models.rds + wildcards: gene=ENSG00000173156 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000174842_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000174842_fitted_models.rds + jobid: 707 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000174842_fitted_models.rds + wildcards: gene=ENSG00000174842 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000259494_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000259494_fitted_models.rds + jobid: 11144 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000259494_fitted_models.rds + wildcards: gene=ENSG00000259494 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000112562_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112562_fitted_models.rds + jobid: 5346 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112562_fitted_models.rds + wildcards: gene=ENSG00000112562 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000179761_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179761_fitted_models.rds + jobid: 12230 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179761_fitted_models.rds + wildcards: gene=ENSG00000179761 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000272449_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000272449_fitted_models.rds + jobid: 60 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000272449_fitted_models.rds + wildcards: gene=ENSG00000272449 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000134440_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134440_fitted_models.rds + jobid: 13002 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134440_fitted_models.rds + wildcards: gene=ENSG00000134440 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000110200_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000110200_fitted_models.rds + jobid: 8310 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000110200_fitted_models.rds + wildcards: gene=ENSG00000110200 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000213533_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000213533_fitted_models.rds + jobid: 2830 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000213533_fitted_models.rds + wildcards: gene=ENSG00000213533 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000188206_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188206_fitted_models.rds + jobid: 1487 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188206_fitted_models.rds + wildcards: gene=ENSG00000188206 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000239900_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000239900_fitted_models.rds + jobid: 14891 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000239900_fitted_models.rds + wildcards: gene=ENSG00000239900 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000175701_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175701_fitted_models.rds + jobid: 2004 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175701_fitted_models.rds + wildcards: gene=ENSG00000175701 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000175283_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175283_fitted_models.rds + jobid: 7629 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175283_fitted_models.rds + wildcards: gene=ENSG00000175283 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000068650_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000068650_fitted_models.rds + jobid: 10223 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000068650_fitted_models.rds + wildcards: gene=ENSG00000068650 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000151461_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000151461_fitted_models.rds + jobid: 8641 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000151461_fitted_models.rds + wildcards: gene=ENSG00000151461 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000081479_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000081479_fitted_models.rds + jobid: 2163 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000081479_fitted_models.rds + wildcards: gene=ENSG00000081479 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000241186_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000241186_fitted_models.rds + jobid: 2701 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000241186_fitted_models.rds + wildcards: gene=ENSG00000241186 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000175602_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175602_fitted_models.rds + jobid: 8210 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175602_fitted_models.rds + wildcards: gene=ENSG00000175602 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000133858_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133858_fitted_models.rds + jobid: 9654 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133858_fitted_models.rds + wildcards: gene=ENSG00000133858 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000130733_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130733_fitted_models.rds + jobid: 13741 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130733_fitted_models.rds + wildcards: gene=ENSG00000130733 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000064666_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000064666_fitted_models.rds + jobid: 13504 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000064666_fitted_models.rds + wildcards: gene=ENSG00000064666 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000102753_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102753_fitted_models.rds + jobid: 10110 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102753_fitted_models.rds + wildcards: gene=ENSG00000102753 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000233493_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000233493_fitted_models.rds + jobid: 14525 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000233493_fitted_models.rds + wildcards: gene=ENSG00000233493 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000110801_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000110801_fitted_models.rds + jobid: 9897 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000110801_fitted_models.rds + wildcards: gene=ENSG00000110801 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000134057_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134057_fitted_models.rds + jobid: 4068 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134057_fitted_models.rds + wildcards: gene=ENSG00000134057 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000259153_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000259153_fitted_models.rds + jobid: 10521 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000259153_fitted_models.rds + wildcards: gene=ENSG00000259153 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000116133_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116133_fitted_models.rds + jobid: 581 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116133_fitted_models.rds + wildcards: gene=ENSG00000116133 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000165476_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165476_fitted_models.rds + jobid: 8802 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165476_fitted_models.rds + wildcards: gene=ENSG00000165476 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000147119_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147119_fitted_models.rds + jobid: 6194 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147119_fitted_models.rds + wildcards: gene=ENSG00000147119 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000173401_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173401_fitted_models.rds + jobid: 9661 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173401_fitted_models.rds + wildcards: gene=ENSG00000173401 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000099256_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099256_fitted_models.rds + jobid: 8693 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099256_fitted_models.rds + wildcards: gene=ENSG00000099256 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163467_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163467_fitted_models.rds + jobid: 1049 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163467_fitted_models.rds + wildcards: gene=ENSG00000163467 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000050344_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000050344_fitted_models.rds + jobid: 5479 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000050344_fitted_models.rds + wildcards: gene=ENSG00000050344 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000159167_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000159167_fitted_models.rds + jobid: 6711 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000159167_fitted_models.rds + wildcards: gene=ENSG00000159167 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000130956_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130956_fitted_models.rds + jobid: 7435 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130956_fitted_models.rds + wildcards: gene=ENSG00000130956 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000275964_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000275964_fitted_models.rds + jobid: 9978 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000275964_fitted_models.rds + wildcards: gene=ENSG00000275964 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000090661_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000090661_fitted_models.rds + jobid: 13679 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000090661_fitted_models.rds + wildcards: gene=ENSG00000090661 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000070770_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000070770_fitted_models.rds + jobid: 11689 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000070770_fitted_models.rds + wildcards: gene=ENSG00000070770 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000172663_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172663_fitted_models.rds + jobid: 8266 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172663_fitted_models.rds + wildcards: gene=ENSG00000172663 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000130254_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130254_fitted_models.rds + jobid: 13621 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130254_fitted_models.rds + wildcards: gene=ENSG00000130254 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000053372_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000053372_fitted_models.rds + jobid: 198 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000053372_fitted_models.rds + wildcards: gene=ENSG00000053372 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000160410_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160410_fitted_models.rds + jobid: 14184 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160410_fitted_models.rds + wildcards: gene=ENSG00000160410 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000102125_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102125_fitted_models.rds + jobid: 6589 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102125_fitted_models.rds + wildcards: gene=ENSG00000102125 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000168876_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168876_fitted_models.rds + jobid: 8409 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168876_fitted_models.rds + wildcards: gene=ENSG00000168876 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163421_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163421_fitted_models.rds + jobid: 2891 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163421_fitted_models.rds + wildcards: gene=ENSG00000163421 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000137210_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137210_fitted_models.rds + jobid: 4617 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137210_fitted_models.rds + wildcards: gene=ENSG00000137210 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000108691_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108691_fitted_models.rds + jobid: 12270 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108691_fitted_models.rds + wildcards: gene=ENSG00000108691 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:43 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000171603_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171603_fitted_models.rds + jobid: 114 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171603_fitted_models.rds + wildcards: gene=ENSG00000171603 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000066583_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000066583_fitted_models.rds + jobid: 4259 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000066583_fitted_models.rds + wildcards: gene=ENSG00000066583 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000253507_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000253507_fitted_models.rds + jobid: 7067 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000253507_fitted_models.rds + wildcards: gene=ENSG00000253507 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000130706_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130706_fitted_models.rds + jobid: 13431 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130706_fitted_models.rds + wildcards: gene=ENSG00000130706 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000105854_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105854_fitted_models.rds + jobid: 5724 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105854_fitted_models.rds + wildcards: gene=ENSG00000105854 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000050438_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000050438_fitted_models.rds + jobid: 9481 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000050438_fitted_models.rds + wildcards: gene=ENSG00000050438 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000108829_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108829_fitted_models.rds + jobid: 12521 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108829_fitted_models.rds + wildcards: gene=ENSG00000108829 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000166833_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166833_fitted_models.rds + jobid: 7931 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166833_fitted_models.rds + wildcards: gene=ENSG00000166833 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000160050_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160050_fitted_models.rds + jobid: 350 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160050_fitted_models.rds + wildcards: gene=ENSG00000160050 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000104177_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104177_fitted_models.rds + jobid: 10868 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104177_fitted_models.rds + wildcards: gene=ENSG00000104177 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000108518_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108518_fitted_models.rds + jobid: 12006 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108518_fitted_models.rds + wildcards: gene=ENSG00000108518 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000178741_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000178741_fitted_models.rds + jobid: 11056 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000178741_fitted_models.rds + wildcards: gene=ENSG00000178741 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000147649_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147649_fitted_models.rds + jobid: 6966 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147649_fitted_models.rds + wildcards: gene=ENSG00000147649 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000138777_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138777_fitted_models.rds + jobid: 3678 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138777_fitted_models.rds + wildcards: gene=ENSG00000138777 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000189184_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000189184_fitted_models.rds + jobid: 3752 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000189184_fitted_models.rds + wildcards: gene=ENSG00000189184 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000159840_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000159840_fitted_models.rds + jobid: 6002 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000159840_fitted_models.rds + wildcards: gene=ENSG00000159840 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000087191_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000087191_fitted_models.rds + jobid: 12613 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000087191_fitted_models.rds + wildcards: gene=ENSG00000087191 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000204348_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204348_fitted_models.rds + jobid: 4814 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204348_fitted_models.rds + wildcards: gene=ENSG00000204348 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000165948_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165948_fitted_models.rds + jobid: 10640 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165948_fitted_models.rds + wildcards: gene=ENSG00000165948 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000143870_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143870_fitted_models.rds + jobid: 1555 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143870_fitted_models.rds + wildcards: gene=ENSG00000143870 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000126432_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000126432_fitted_models.rds + jobid: 8154 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000126432_fitted_models.rds + wildcards: gene=ENSG00000126432 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000130164_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130164_fitted_models.rds + jobid: 13744 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130164_fitted_models.rds + wildcards: gene=ENSG00000130164 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000166348_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166348_fitted_models.rds + jobid: 8864 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166348_fitted_models.rds + wildcards: gene=ENSG00000166348 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000233822_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000233822_fitted_models.rds + jobid: 4722 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000233822_fitted_models.rds + wildcards: gene=ENSG00000233822 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000116898_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116898_fitted_models.rds + jobid: 408 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116898_fitted_models.rds + wildcards: gene=ENSG00000116898 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000060656_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000060656_fitted_models.rds + jobid: 332 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000060656_fitted_models.rds + wildcards: gene=ENSG00000060656 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000169504_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169504_fitted_models.rds + jobid: 256 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169504_fitted_models.rds + wildcards: gene=ENSG00000169504 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000143727_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143727_fitted_models.rds + jobid: 1510 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143727_fitted_models.rds + wildcards: gene=ENSG00000143727 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000090013_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000090013_fitted_models.rds + jobid: 14182 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000090013_fitted_models.rds + wildcards: gene=ENSG00000090013 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000217442_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000217442_fitted_models.rds + jobid: 14999 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000217442_fitted_models.rds + wildcards: gene=ENSG00000217442 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000134954_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134954_fitted_models.rds + jobid: 8580 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134954_fitted_models.rds + wildcards: gene=ENSG00000134954 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000170855_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170855_fitted_models.rds + jobid: 9870 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170855_fitted_models.rds + wildcards: gene=ENSG00000170855 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000177700_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177700_fitted_models.rds + jobid: 7802 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177700_fitted_models.rds + wildcards: gene=ENSG00000177700 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000231698_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000231698_fitted_models.rds + jobid: 8590 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000231698_fitted_models.rds + wildcards: gene=ENSG00000231698 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000214253_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000214253_fitted_models.rds + jobid: 5810 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000214253_fitted_models.rds + wildcards: gene=ENSG00000214253 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000170088_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170088_fitted_models.rds + jobid: 3829 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170088_fitted_models.rds + wildcards: gene=ENSG00000170088 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000147852_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147852_fitted_models.rds + jobid: 7176 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147852_fitted_models.rds + wildcards: gene=ENSG00000147852 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167861_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167861_fitted_models.rds + jobid: 12675 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167861_fitted_models.rds + wildcards: gene=ENSG00000167861 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000214756_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000214756_fitted_models.rds + jobid: 8105 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000214756_fitted_models.rds + wildcards: gene=ENSG00000214756 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000099804_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099804_fitted_models.rds + jobid: 13482 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099804_fitted_models.rds + wildcards: gene=ENSG00000099804 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000280511_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000280511_fitted_models.rds + jobid: 5053 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000280511_fitted_models.rds + wildcards: gene=ENSG00000280511 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000188846_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188846_fitted_models.rds + jobid: 2654 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188846_fitted_models.rds + wildcards: gene=ENSG00000188846 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000165209_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165209_fitted_models.rds + jobid: 7555 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165209_fitted_models.rds + wildcards: gene=ENSG00000165209 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000160014_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160014_fitted_models.rds + jobid: 14309 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160014_fitted_models.rds + wildcards: gene=ENSG00000160014 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000176903_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176903_fitted_models.rds + jobid: 10540 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176903_fitted_models.rds + wildcards: gene=ENSG00000176903 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000107551_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107551_fitted_models.rds + jobid: 8750 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107551_fitted_models.rds + wildcards: gene=ENSG00000107551 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000134253_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134253_fitted_models.rds + jobid: 840 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134253_fitted_models.rds + wildcards: gene=ENSG00000134253 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163428_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163428_fitted_models.rds + jobid: 2991 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163428_fitted_models.rds + wildcards: gene=ENSG00000163428 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000102996_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102996_fitted_models.rds + jobid: 11687 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102996_fitted_models.rds + wildcards: gene=ENSG00000102996 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000159079_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000159079_fitted_models.rds + jobid: 15054 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000159079_fitted_models.rds + wildcards: gene=ENSG00000159079 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000112378_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112378_fitted_models.rds + jobid: 5249 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112378_fitted_models.rds + wildcards: gene=ENSG00000112378 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000107438_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107438_fitted_models.rds + jobid: 8963 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107438_fitted_models.rds + wildcards: gene=ENSG00000107438 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000076944_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000076944_fitted_models.rds + jobid: 13664 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000076944_fitted_models.rds + wildcards: gene=ENSG00000076944 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000185324_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185324_fitted_models.rds + jobid: 11918 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185324_fitted_models.rds + wildcards: gene=ENSG00000185324 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167004_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167004_fitted_models.rds + jobid: 10848 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167004_fitted_models.rds + wildcards: gene=ENSG00000167004 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000075618_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000075618_fitted_models.rds + jobid: 5406 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000075618_fitted_models.rds + wildcards: gene=ENSG00000075618 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000204237_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204237_fitted_models.rds + jobid: 12784 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204237_fitted_models.rds + wildcards: gene=ENSG00000204237 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000250366_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000250366_fitted_models.rds + jobid: 10652 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000250366_fitted_models.rds + wildcards: gene=ENSG00000250366 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000266472_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000266472_fitted_models.rds + jobid: 914 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000266472_fitted_models.rds + wildcards: gene=ENSG00000266472 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000188483_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188483_fitted_models.rds + jobid: 7636 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188483_fitted_models.rds + wildcards: gene=ENSG00000188483 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000110955_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000110955_fitted_models.rds + jobid: 9567 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000110955_fitted_models.rds + wildcards: gene=ENSG00000110955 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000086666_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000086666_fitted_models.rds + jobid: 11104 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000086666_fitted_models.rds + wildcards: gene=ENSG00000086666 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167118_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167118_fitted_models.rds + jobid: 7612 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167118_fitted_models.rds + wildcards: gene=ENSG00000167118 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000168159_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168159_fitted_models.rds + jobid: 1419 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168159_fitted_models.rds + wildcards: gene=ENSG00000168159 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000159685_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000159685_fitted_models.rds + jobid: 3038 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000159685_fitted_models.rds + wildcards: gene=ENSG00000159685 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000145907_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145907_fitted_models.rds + jobid: 4429 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145907_fitted_models.rds + wildcards: gene=ENSG00000145907 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000134684_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134684_fitted_models.rds + jobid: 366 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134684_fitted_models.rds + wildcards: gene=ENSG00000134684 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000243449_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000243449_fitted_models.rds + jobid: 3373 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000243449_fitted_models.rds + wildcards: gene=ENSG00000243449 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000180071_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000180071_fitted_models.rds + jobid: 7320 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000180071_fitted_models.rds + wildcards: gene=ENSG00000180071 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000160326_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160326_fitted_models.rds + jobid: 7687 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160326_fitted_models.rds + wildcards: gene=ENSG00000160326 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000051523_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000051523_fitted_models.rds + jobid: 11893 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000051523_fitted_models.rds + wildcards: gene=ENSG00000051523 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000147010_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147010_fitted_models.rds + jobid: 6144 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147010_fitted_models.rds + wildcards: gene=ENSG00000147010 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000105576_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105576_fitted_models.rds + jobid: 13792 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105576_fitted_models.rds + wildcards: gene=ENSG00000105576 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000186468_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000186468_fitted_models.rds + jobid: 4143 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000186468_fitted_models.rds + wildcards: gene=ENSG00000186468 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000023572_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000023572_fitted_models.rds + jobid: 1222 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000023572_fitted_models.rds + wildcards: gene=ENSG00000023572 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000104763_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104763_fitted_models.rds + jobid: 6672 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104763_fitted_models.rds + wildcards: gene=ENSG00000104763 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000148357_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000148357_fitted_models.rds + jobid: 7650 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000148357_fitted_models.rds + wildcards: gene=ENSG00000148357 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000143450_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143450_fitted_models.rds + jobid: 955 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143450_fitted_models.rds + wildcards: gene=ENSG00000143450 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000154473_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000154473_fitted_models.rds + jobid: 9136 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000154473_fitted_models.rds + wildcards: gene=ENSG00000154473 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000111666_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111666_fitted_models.rds + jobid: 9738 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111666_fitted_models.rds + wildcards: gene=ENSG00000111666 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000239467_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000239467_fitted_models.rds + jobid: 2173 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000239467_fitted_models.rds + wildcards: gene=ENSG00000239467 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000133026_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133026_fitted_models.rds + jobid: 12102 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133026_fitted_models.rds + wildcards: gene=ENSG00000133026 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000109534_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000109534_fitted_models.rds + jobid: 3696 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000109534_fitted_models.rds + wildcards: gene=ENSG00000109534 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000153879_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153879_fitted_models.rds + jobid: 14018 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153879_fitted_models.rds + wildcards: gene=ENSG00000153879 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000077150_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000077150_fitted_models.rds + jobid: 9038 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000077150_fitted_models.rds + wildcards: gene=ENSG00000077150 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000109113_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000109113_fitted_models.rds + jobid: 12220 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000109113_fitted_models.rds + wildcards: gene=ENSG00000109113 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000184083_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184083_fitted_models.rds + jobid: 6267 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184083_fitted_models.rds + wildcards: gene=ENSG00000184083 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000204568_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204568_fitted_models.rds + jobid: 4764 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204568_fitted_models.rds + wildcards: gene=ENSG00000204568 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000176396_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176396_fitted_models.rds + jobid: 14165 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176396_fitted_models.rds + wildcards: gene=ENSG00000176396 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167670_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167670_fitted_models.rds + jobid: 13604 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167670_fitted_models.rds + wildcards: gene=ENSG00000167670 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000229117_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000229117_fitted_models.rds + jobid: 9545 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000229117_fitted_models.rds + wildcards: gene=ENSG00000229117 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000175868_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175868_fitted_models.rds + jobid: 7905 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175868_fitted_models.rds + wildcards: gene=ENSG00000175868 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000102805_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102805_fitted_models.rds + jobid: 10158 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102805_fitted_models.rds + wildcards: gene=ENSG00000102805 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000177954_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177954_fitted_models.rds + jobid: 984 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177954_fitted_models.rds + wildcards: gene=ENSG00000177954 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000182512_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182512_fitted_models.rds + jobid: 10649 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182512_fitted_models.rds + wildcards: gene=ENSG00000182512 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000111229_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111229_fitted_models.rds + jobid: 9798 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111229_fitted_models.rds + wildcards: gene=ENSG00000111229 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000114107_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114107_fitted_models.rds + jobid: 3101 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114107_fitted_models.rds + wildcards: gene=ENSG00000114107 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000166913_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166913_fitted_models.rds + jobid: 13320 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166913_fitted_models.rds + wildcards: gene=ENSG00000166913 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000129244_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000129244_fitted_models.rds + jobid: 12075 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000129244_fitted_models.rds + wildcards: gene=ENSG00000129244 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000006757_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000006757_fitted_models.rds + jobid: 6100 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000006757_fitted_models.rds + wildcards: gene=ENSG00000006757 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000084234_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000084234_fitted_models.rds + jobid: 8584 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000084234_fitted_models.rds + wildcards: gene=ENSG00000084234 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000143156_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143156_fitted_models.rds + jobid: 1141 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143156_fitted_models.rds + wildcards: gene=ENSG00000143156 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163312_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163312_fitted_models.rds + jobid: 3612 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163312_fitted_models.rds + wildcards: gene=ENSG00000163312 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000104946_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104946_fitted_models.rds + jobid: 14411 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104946_fitted_models.rds + wildcards: gene=ENSG00000104946 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000172775_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172775_fitted_models.rds + jobid: 11670 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172775_fitted_models.rds + wildcards: gene=ENSG00000172775 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000144115_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000144115_fitted_models.rds + jobid: 1916 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000144115_fitted_models.rds + wildcards: gene=ENSG00000144115 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000151465_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000151465_fitted_models.rds + jobid: 8645 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000151465_fitted_models.rds + wildcards: gene=ENSG00000151465 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000132254_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132254_fitted_models.rds + jobid: 7846 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132254_fitted_models.rds + wildcards: gene=ENSG00000132254 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000125772_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125772_fitted_models.rds + jobid: 13132 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125772_fitted_models.rds + wildcards: gene=ENSG00000125772 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000090530_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000090530_fitted_models.rds + jobid: 3285 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000090530_fitted_models.rds + wildcards: gene=ENSG00000090530 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100804_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100804_fitted_models.rds + jobid: 10278 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100804_fitted_models.rds + wildcards: gene=ENSG00000100804 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000165171_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165171_fitted_models.rds + jobid: 5639 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165171_fitted_models.rds + wildcards: gene=ENSG00000165171 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000124193_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124193_fitted_models.rds + jobid: 13303 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124193_fitted_models.rds + wildcards: gene=ENSG00000124193 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000131979_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131979_fitted_models.rds + jobid: 10425 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131979_fitted_models.rds + wildcards: gene=ENSG00000131979 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000106588_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106588_fitted_models.rds + jobid: 5539 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106588_fitted_models.rds + wildcards: gene=ENSG00000106588 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000156103_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000156103_fitted_models.rds + jobid: 6924 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000156103_fitted_models.rds + wildcards: gene=ENSG00000156103 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000141556_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141556_fitted_models.rds + jobid: 12829 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141556_fitted_models.rds + wildcards: gene=ENSG00000141556 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100410_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100410_fitted_models.rds + jobid: 14907 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100410_fitted_models.rds + wildcards: gene=ENSG00000100410 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000137692_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137692_fitted_models.rds + jobid: 8434 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137692_fitted_models.rds + wildcards: gene=ENSG00000137692 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000108561_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108561_fitted_models.rds + jobid: 12020 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108561_fitted_models.rds + wildcards: gene=ENSG00000108561 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000185946_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185946_fitted_models.rds + jobid: 749 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185946_fitted_models.rds + wildcards: gene=ENSG00000185946 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000121931_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000121931_fitted_models.rds + jobid: 789 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000121931_fitted_models.rds + wildcards: gene=ENSG00000121931 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000104967_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104967_fitted_models.rds + jobid: 14301 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104967_fitted_models.rds + wildcards: gene=ENSG00000104967 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000184887_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184887_fitted_models.rds + jobid: 10722 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184887_fitted_models.rds + wildcards: gene=ENSG00000184887 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000090060_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000090060_fitted_models.rds + jobid: 10658 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000090060_fitted_models.rds + wildcards: gene=ENSG00000090060 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000077782_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000077782_fitted_models.rds + jobid: 6780 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000077782_fitted_models.rds + wildcards: gene=ENSG00000077782 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000161011_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000161011_fitted_models.rds + jobid: 4552 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000161011_fitted_models.rds + wildcards: gene=ENSG00000161011 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000129195_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000129195_fitted_models.rds + jobid: 12026 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000129195_fitted_models.rds + wildcards: gene=ENSG00000129195 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000180340_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000180340_fitted_models.rds + jobid: 12436 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000180340_fitted_models.rds + wildcards: gene=ENSG00000180340 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000139117_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000139117_fitted_models.rds + jobid: 9392 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000139117_fitted_models.rds + wildcards: gene=ENSG00000139117 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000104660_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104660_fitted_models.rds + jobid: 6743 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104660_fitted_models.rds + wildcards: gene=ENSG00000104660 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000114200_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114200_fitted_models.rds + jobid: 3192 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114200_fitted_models.rds + wildcards: gene=ENSG00000114200 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164463_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164463_fitted_models.rds + jobid: 4485 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164463_fitted_models.rds + wildcards: gene=ENSG00000164463 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000179889_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179889_fitted_models.rds + jobid: 11425 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179889_fitted_models.rds + wildcards: gene=ENSG00000179889 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163468_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163468_fitted_models.rds + jobid: 1048 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163468_fitted_models.rds + wildcards: gene=ENSG00000163468 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000212907_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000212907_fitted_models.rds + jobid: 15179 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000212907_fitted_models.rds + wildcards: gene=ENSG00000212907 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000197345_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197345_fitted_models.rds + jobid: 8286 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197345_fitted_models.rds + wildcards: gene=ENSG00000197345 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000149499_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000149499_fitted_models.rds + jobid: 8099 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000149499_fitted_models.rds + wildcards: gene=ENSG00000149499 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000140284_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140284_fitted_models.rds + jobid: 10883 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140284_fitted_models.rds + wildcards: gene=ENSG00000140284 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000147403_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147403_fitted_models.rds + jobid: 6586 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147403_fitted_models.rds + wildcards: gene=ENSG00000147403 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000117519_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117519_fitted_models.rds + jobid: 724 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117519_fitted_models.rds + wildcards: gene=ENSG00000117519 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000117450_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117450_fitted_models.rds + jobid: 516 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117450_fitted_models.rds + wildcards: gene=ENSG00000117450 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163933_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163933_fitted_models.rds + jobid: 2832 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163933_fitted_models.rds + wildcards: gene=ENSG00000163933 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000172922_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172922_fitted_models.rds + jobid: 8202 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172922_fitted_models.rds + wildcards: gene=ENSG00000172922 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000215845_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000215845_fitted_models.rds + jobid: 1089 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000215845_fitted_models.rds + wildcards: gene=ENSG00000215845 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000169855_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169855_fitted_models.rds + jobid: 2903 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169855_fitted_models.rds + wildcards: gene=ENSG00000169855 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000228463_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000228463_fitted_models.rds + jobid: 2 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000228463_fitted_models.rds + wildcards: gene=ENSG00000228463 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000189334_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000189334_fitted_models.rds + jobid: 965 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000189334_fitted_models.rds + wildcards: gene=ENSG00000189334 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000165215_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165215_fitted_models.rds + jobid: 5637 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165215_fitted_models.rds + wildcards: gene=ENSG00000165215 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000154310_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000154310_fitted_models.rds + jobid: 3211 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000154310_fitted_models.rds + wildcards: gene=ENSG00000154310 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164418_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164418_fitted_models.rds + jobid: 5120 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164418_fitted_models.rds + wildcards: gene=ENSG00000164418 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000227124_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000227124_fitted_models.rds + jobid: 2901 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000227124_fitted_models.rds + wildcards: gene=ENSG00000227124 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000246705_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000246705_fitted_models.rds + jobid: 9323 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000246705_fitted_models.rds + wildcards: gene=ENSG00000246705 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000135046_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135046_fitted_models.rds + jobid: 7356 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135046_fitted_models.rds + wildcards: gene=ENSG00000135046 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000073536_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000073536_fitted_models.rds + jobid: 12276 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000073536_fitted_models.rds + wildcards: gene=ENSG00000073536 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000125351_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125351_fitted_models.rds + jobid: 6467 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125351_fitted_models.rds + wildcards: gene=ENSG00000125351 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164742_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164742_fitted_models.rds + jobid: 5571 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164742_fitted_models.rds + wildcards: gene=ENSG00000164742 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198625_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198625_fitted_models.rds + jobid: 1284 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198625_fitted_models.rds + wildcards: gene=ENSG00000198625 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000061938_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000061938_fitted_models.rds + jobid: 3308 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000061938_fitted_models.rds + wildcards: gene=ENSG00000061938 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164106_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164106_fitted_models.rds + jobid: 3849 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164106_fitted_models.rds + wildcards: gene=ENSG00000164106 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000145041_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145041_fitted_models.rds + jobid: 2800 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145041_fitted_models.rds + wildcards: gene=ENSG00000145041 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000155366_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000155366_fitted_models.rds + jobid: 805 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000155366_fitted_models.rds + wildcards: gene=ENSG00000155366 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000235706_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000235706_fitted_models.rds + jobid: 10646 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000235706_fitted_models.rds + wildcards: gene=ENSG00000235706 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000248508_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000248508_fitted_models.rds + jobid: 10790 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000248508_fitted_models.rds + wildcards: gene=ENSG00000248508 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000196323_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196323_fitted_models.rds + jobid: 8586 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196323_fitted_models.rds + wildcards: gene=ENSG00000196323 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167996_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167996_fitted_models.rds + jobid: 8092 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167996_fitted_models.rds + wildcards: gene=ENSG00000167996 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000204186_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204186_fitted_models.rds + jobid: 2319 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204186_fitted_models.rds + wildcards: gene=ENSG00000204186 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000111907_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111907_fitted_models.rds + jobid: 5205 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111907_fitted_models.rds + wildcards: gene=ENSG00000111907 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000196139_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196139_fitted_models.rds + jobid: 8618 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196139_fitted_models.rds + wildcards: gene=ENSG00000196139 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000176209_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176209_fitted_models.rds + jobid: 6800 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176209_fitted_models.rds + wildcards: gene=ENSG00000176209 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000114956_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114956_fitted_models.rds + jobid: 1851 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114956_fitted_models.rds + wildcards: gene=ENSG00000114956 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000269947_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000269947_fitted_models.rds + jobid: 12096 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000269947_fitted_models.rds + wildcards: gene=ENSG00000269947 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000130723_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130723_fitted_models.rds + jobid: 7662 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130723_fitted_models.rds + wildcards: gene=ENSG00000130723 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000105552_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105552_fitted_models.rds + jobid: 14362 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105552_fitted_models.rds + wildcards: gene=ENSG00000105552 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000166405_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166405_fitted_models.rds + jobid: 7861 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166405_fitted_models.rds + wildcards: gene=ENSG00000166405 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000171155_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171155_fitted_models.rds + jobid: 6478 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171155_fitted_models.rds + wildcards: gene=ENSG00000171155 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000101220_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101220_fitted_models.rds + jobid: 13115 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101220_fitted_models.rds + wildcards: gene=ENSG00000101220 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000179918_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179918_fitted_models.rds + jobid: 11565 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179918_fitted_models.rds + wildcards: gene=ENSG00000179918 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:44 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000126226_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000126226_fitted_models.rds + jobid: 10227 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000126226_fitted_models.rds + wildcards: gene=ENSG00000126226 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164049_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164049_fitted_models.rds + jobid: 2722 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164049_fitted_models.rds + wildcards: gene=ENSG00000164049 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000197061_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197061_fitted_models.rds + jobid: 4678 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197061_fitted_models.rds + wildcards: gene=ENSG00000197061 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000067057_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000067057_fitted_models.rds + jobid: 8613 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000067057_fitted_models.rds + wildcards: gene=ENSG00000067057 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000105427_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105427_fitted_models.rds + jobid: 14222 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105427_fitted_models.rds + wildcards: gene=ENSG00000105427 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000115286_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115286_fitted_models.rds + jobid: 13518 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115286_fitted_models.rds + wildcards: gene=ENSG00000115286 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000187608_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000187608_fitted_models.rds + jobid: 11 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000187608_fitted_models.rds + wildcards: gene=ENSG00000187608 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000183386_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183386_fitted_models.rds + jobid: 423 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183386_fitted_models.rds + wildcards: gene=ENSG00000183386 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000104067_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104067_fitted_models.rds + jobid: 10750 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104067_fitted_models.rds + wildcards: gene=ENSG00000104067 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000184160_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184160_fitted_models.rds + jobid: 3391 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184160_fitted_models.rds + wildcards: gene=ENSG00000184160 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000141295_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141295_fitted_models.rds + jobid: 12481 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141295_fitted_models.rds + wildcards: gene=ENSG00000141295 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000126790_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000126790_fitted_models.rds + jobid: 10453 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000126790_fitted_models.rds + wildcards: gene=ENSG00000126790 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000162601_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162601_fitted_models.rds + jobid: 591 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162601_fitted_models.rds + wildcards: gene=ENSG00000162601 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000041802_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000041802_fitted_models.rds + jobid: 3300 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000041802_fitted_models.rds + wildcards: gene=ENSG00000041802 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000183726_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183726_fitted_models.rds + jobid: 260 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183726_fitted_models.rds + wildcards: gene=ENSG00000183726 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000204713_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204713_fitted_models.rds + jobid: 4744 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204713_fitted_models.rds + wildcards: gene=ENSG00000204713 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000157399_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000157399_fitted_models.rds + jobid: 6092 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000157399_fitted_models.rds + wildcards: gene=ENSG00000157399 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000170473_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170473_fitted_models.rds + jobid: 9535 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170473_fitted_models.rds + wildcards: gene=ENSG00000170473 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000108179_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108179_fitted_models.rds + jobid: 8891 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108179_fitted_models.rds + wildcards: gene=ENSG00000108179 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000124733_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124733_fitted_models.rds + jobid: 4949 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124733_fitted_models.rds + wildcards: gene=ENSG00000124733 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000028839_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000028839_fitted_models.rds + jobid: 5232 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000028839_fitted_models.rds + wildcards: gene=ENSG00000028839 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000183798_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183798_fitted_models.rds + jobid: 13301 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183798_fitted_models.rds + wildcards: gene=ENSG00000183798 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000205090_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000205090_fitted_models.rds + jobid: 37 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000205090_fitted_models.rds + wildcards: gene=ENSG00000205090 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000196504_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196504_fitted_models.rds + jobid: 2121 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196504_fitted_models.rds + wildcards: gene=ENSG00000196504 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000228253_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000228253_fitted_models.rds + jobid: 15175 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000228253_fitted_models.rds + wildcards: gene=ENSG00000228253 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167747_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167747_fitted_models.rds + jobid: 14431 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167747_fitted_models.rds + wildcards: gene=ENSG00000167747 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000176371_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176371_fitted_models.rds + jobid: 11134 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176371_fitted_models.rds + wildcards: gene=ENSG00000176371 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000181029_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000181029_fitted_models.rds + jobid: 13665 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000181029_fitted_models.rds + wildcards: gene=ENSG00000181029 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000080511_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000080511_fitted_models.rds + jobid: 13708 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000080511_fitted_models.rds + wildcards: gene=ENSG00000080511 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000147140_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147140_fitted_models.rds + jobid: 6320 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147140_fitted_models.rds + wildcards: gene=ENSG00000147140 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000169857_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169857_fitted_models.rds + jobid: 10763 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169857_fitted_models.rds + wildcards: gene=ENSG00000169857 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000125148_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125148_fitted_models.rds + jobid: 11660 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125148_fitted_models.rds + wildcards: gene=ENSG00000125148 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167863_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167863_fitted_models.rds + jobid: 12679 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167863_fitted_models.rds + wildcards: gene=ENSG00000167863 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000119655_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119655_fitted_models.rds + jobid: 10552 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119655_fitted_models.rds + wildcards: gene=ENSG00000119655 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000142227_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142227_fitted_models.rds + jobid: 14343 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142227_fitted_models.rds + wildcards: gene=ENSG00000142227 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000109445_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000109445_fitted_models.rds + jobid: 3770 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000109445_fitted_models.rds + wildcards: gene=ENSG00000109445 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000106261_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106261_fitted_models.rds + jobid: 5757 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106261_fitted_models.rds + wildcards: gene=ENSG00000106261 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000137154_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137154_fitted_models.rds + jobid: 7220 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137154_fitted_models.rds + wildcards: gene=ENSG00000137154 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000108828_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108828_fitted_models.rds + jobid: 12404 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108828_fitted_models.rds + wildcards: gene=ENSG00000108828 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000143878_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143878_fitted_models.rds + jobid: 1582 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143878_fitted_models.rds + wildcards: gene=ENSG00000143878 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000074201_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000074201_fitted_models.rds + jobid: 8359 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000074201_fitted_models.rds + wildcards: gene=ENSG00000074201 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000180336_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000180336_fitted_models.rds + jobid: 12437 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000180336_fitted_models.rds + wildcards: gene=ENSG00000180336 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000104290_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104290_fitted_models.rds + jobid: 6735 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104290_fitted_models.rds + wildcards: gene=ENSG00000104290 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000134285_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134285_fitted_models.rds + jobid: 9440 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134285_fitted_models.rds + wildcards: gene=ENSG00000134285 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000244405_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000244405_fitted_models.rds + jobid: 3272 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000244405_fitted_models.rds + wildcards: gene=ENSG00000244405 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000128567_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128567_fitted_models.rds + jobid: 5941 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128567_fitted_models.rds + wildcards: gene=ENSG00000128567 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164405_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164405_fitted_models.rds + jobid: 4277 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164405_fitted_models.rds + wildcards: gene=ENSG00000164405 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000183161_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183161_fitted_models.rds + jobid: 7936 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183161_fitted_models.rds + wildcards: gene=ENSG00000183161 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100842_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100842_fitted_models.rds + jobid: 10289 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100842_fitted_models.rds + wildcards: gene=ENSG00000100842 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000181218_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000181218_fitted_models.rds + jobid: 1417 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000181218_fitted_models.rds + wildcards: gene=ENSG00000181218 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000107341_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107341_fitted_models.rds + jobid: 7255 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107341_fitted_models.rds + wildcards: gene=ENSG00000107341 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000189043_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000189043_fitted_models.rds + jobid: 5433 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000189043_fitted_models.rds + wildcards: gene=ENSG00000189043 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000146701_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000146701_fitted_models.rds + jobid: 5660 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000146701_fitted_models.rds + wildcards: gene=ENSG00000146701 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000177108_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177108_fitted_models.rds + jobid: 10579 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177108_fitted_models.rds + wildcards: gene=ENSG00000177108 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198911_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198911_fitted_models.rds + jobid: 14918 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198911_fitted_models.rds + wildcards: gene=ENSG00000198911 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000133422_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133422_fitted_models.rds + jobid: 14792 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133422_fitted_models.rds + wildcards: gene=ENSG00000133422 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000267041_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000267041_fitted_models.rds + jobid: 14095 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000267041_fitted_models.rds + wildcards: gene=ENSG00000267041 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000166105_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166105_fitted_models.rds + jobid: 8600 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166105_fitted_models.rds + wildcards: gene=ENSG00000166105 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100028_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100028_fitted_models.rds + jobid: 14729 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100028_fitted_models.rds + wildcards: gene=ENSG00000100028 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000137101_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137101_fitted_models.rds + jobid: 7283 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137101_fitted_models.rds + wildcards: gene=ENSG00000137101 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000186314_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000186314_fitted_models.rds + jobid: 4387 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000186314_fitted_models.rds + wildcards: gene=ENSG00000186314 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000128311_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128311_fitted_models.rds + jobid: 14831 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128311_fitted_models.rds + wildcards: gene=ENSG00000128311 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000258609_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000258609_fitted_models.rds + jobid: 12998 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000258609_fitted_models.rds + wildcards: gene=ENSG00000258609 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000225205_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000225205_fitted_models.rds + jobid: 2186 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000225205_fitted_models.rds + wildcards: gene=ENSG00000225205 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000119471_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119471_fitted_models.rds + jobid: 7502 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119471_fitted_models.rds + wildcards: gene=ENSG00000119471 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000139364_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000139364_fitted_models.rds + jobid: 9944 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000139364_fitted_models.rds + wildcards: gene=ENSG00000139364 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000178127_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000178127_fitted_models.rds + jobid: 12865 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000178127_fitted_models.rds + wildcards: gene=ENSG00000178127 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000005075_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000005075_fitted_models.rds + jobid: 5821 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000005075_fitted_models.rds + wildcards: gene=ENSG00000005075 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000125877_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125877_fitted_models.rds + jobid: 13109 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125877_fitted_models.rds + wildcards: gene=ENSG00000125877 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000113810_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113810_fitted_models.rds + jobid: 3184 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113810_fitted_models.rds + wildcards: gene=ENSG00000113810 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000156261_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000156261_fitted_models.rds + jobid: 15039 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000156261_fitted_models.rds + wildcards: gene=ENSG00000156261 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000084207_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000084207_fitted_models.rds + jobid: 8270 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000084207_fitted_models.rds + wildcards: gene=ENSG00000084207 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000169926_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169926_fitted_models.rds + jobid: 10756 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169926_fitted_models.rds + wildcards: gene=ENSG00000169926 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000135930_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135930_fitted_models.rds + jobid: 2439 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135930_fitted_models.rds + wildcards: gene=ENSG00000135930 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000136950_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136950_fitted_models.rds + jobid: 7565 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136950_fitted_models.rds + wildcards: gene=ENSG00000136950 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000189057_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000189057_fitted_models.rds + jobid: 8056 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000189057_fitted_models.rds + wildcards: gene=ENSG00000189057 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000081760_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000081760_fitted_models.rds + jobid: 9943 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000081760_fitted_models.rds + wildcards: gene=ENSG00000081760 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000176728_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176728_fitted_models.rds + jobid: 14632 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176728_fitted_models.rds + wildcards: gene=ENSG00000176728 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000184481_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184481_fitted_models.rds + jobid: 6316 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184481_fitted_models.rds + wildcards: gene=ENSG00000184481 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000106688_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106688_fitted_models.rds + jobid: 7180 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106688_fitted_models.rds + wildcards: gene=ENSG00000106688 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100201_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100201_fitted_models.rds + jobid: 14861 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100201_fitted_models.rds + wildcards: gene=ENSG00000100201 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000168538_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168538_fitted_models.rds + jobid: 3869 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168538_fitted_models.rds + wildcards: gene=ENSG00000168538 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198668_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198668_fitted_models.rds + jobid: 10612 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198668_fitted_models.rds + wildcards: gene=ENSG00000198668 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000109133_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000109133_fitted_models.rds + jobid: 3491 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000109133_fitted_models.rds + wildcards: gene=ENSG00000109133 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000099783_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099783_fitted_models.rds + jobid: 13688 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099783_fitted_models.rds + wildcards: gene=ENSG00000099783 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000243440_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000243440_fitted_models.rds + jobid: 15017 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000243440_fitted_models.rds + wildcards: gene=ENSG00000243440 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000133612_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133612_fitted_models.rds + jobid: 6042 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133612_fitted_models.rds + wildcards: gene=ENSG00000133612 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000075218_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000075218_fitted_models.rds + jobid: 14967 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000075218_fitted_models.rds + wildcards: gene=ENSG00000075218 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000113739_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113739_fitted_models.rds + jobid: 4487 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113739_fitted_models.rds + wildcards: gene=ENSG00000113739 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000125740_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125740_fitted_models.rds + jobid: 14285 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125740_fitted_models.rds + wildcards: gene=ENSG00000125740 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000145919_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145919_fitted_models.rds + jobid: 4488 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145919_fitted_models.rds + wildcards: gene=ENSG00000145919 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000176422_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176422_fitted_models.rds + jobid: 9563 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176422_fitted_models.rds + wildcards: gene=ENSG00000176422 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000113648_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113648_fitted_models.rds + jobid: 4300 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113648_fitted_models.rds + wildcards: gene=ENSG00000113648 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000165487_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165487_fitted_models.rds + jobid: 9992 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165487_fitted_models.rds + wildcards: gene=ENSG00000165487 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000135070_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135070_fitted_models.rds + jobid: 7386 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135070_fitted_models.rds + wildcards: gene=ENSG00000135070 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000166482_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166482_fitted_models.rds + jobid: 12181 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166482_fitted_models.rds + wildcards: gene=ENSG00000166482 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000196502_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196502_fitted_models.rds + jobid: 11512 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196502_fitted_models.rds + wildcards: gene=ENSG00000196502 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000060069_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000060069_fitted_models.rds + jobid: 13060 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000060069_fitted_models.rds + wildcards: gene=ENSG00000060069 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000144451_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000144451_fitted_models.rds + jobid: 2348 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000144451_fitted_models.rds + wildcards: gene=ENSG00000144451 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000113643_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113643_fitted_models.rds + jobid: 4464 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113643_fitted_models.rds + wildcards: gene=ENSG00000113643 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000178952_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000178952_fitted_models.rds + jobid: 11516 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000178952_fitted_models.rds + wildcards: gene=ENSG00000178952 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000115520_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115520_fitted_models.rds + jobid: 2268 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115520_fitted_models.rds + wildcards: gene=ENSG00000115520 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000233927_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000233927_fitted_models.rds + jobid: 13682 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000233927_fitted_models.rds + wildcards: gene=ENSG00000233927 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000132286_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132286_fitted_models.rds + jobid: 7847 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132286_fitted_models.rds + wildcards: gene=ENSG00000132286 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000065427_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000065427_fitted_models.rds + jobid: 11833 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000065427_fitted_models.rds + wildcards: gene=ENSG00000065427 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000269019_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000269019_fitted_models.rds + jobid: 13933 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000269019_fitted_models.rds + wildcards: gene=ENSG00000269019 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000250565_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000250565_fitted_models.rds + jobid: 1723 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000250565_fitted_models.rds + wildcards: gene=ENSG00000250565 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000144224_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000144224_fitted_models.rds + jobid: 2093 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000144224_fitted_models.rds + wildcards: gene=ENSG00000144224 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000130294_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130294_fitted_models.rds + jobid: 2481 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130294_fitted_models.rds + wildcards: gene=ENSG00000130294 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000277639_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000277639_fitted_models.rds + jobid: 11642 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000277639_fitted_models.rds + wildcards: gene=ENSG00000277639 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000101004_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101004_fitted_models.rds + jobid: 13201 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101004_fitted_models.rds + wildcards: gene=ENSG00000101004 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000175756_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175756_fitted_models.rds + jobid: 28 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175756_fitted_models.rds + wildcards: gene=ENSG00000175756 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000064687_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000064687_fitted_models.rds + jobid: 13505 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000064687_fitted_models.rds + wildcards: gene=ENSG00000064687 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000107186_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107186_fitted_models.rds + jobid: 7203 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107186_fitted_models.rds + wildcards: gene=ENSG00000107186 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000149136_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000149136_fitted_models.rds + jobid: 8039 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000149136_fitted_models.rds + wildcards: gene=ENSG00000149136 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000196924_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196924_fitted_models.rds + jobid: 6584 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196924_fitted_models.rds + wildcards: gene=ENSG00000196924 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000170919_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170919_fitted_models.rds + jobid: 10084 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170919_fitted_models.rds + wildcards: gene=ENSG00000170919 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000172687_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172687_fitted_models.rds + jobid: 13972 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172687_fitted_models.rds + wildcards: gene=ENSG00000172687 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000119632_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119632_fitted_models.rds + jobid: 10642 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119632_fitted_models.rds + wildcards: gene=ENSG00000119632 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000161204_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000161204_fitted_models.rds + jobid: 3250 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000161204_fitted_models.rds + wildcards: gene=ENSG00000161204 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000113763_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113763_fitted_models.rds + jobid: 4507 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113763_fitted_models.rds + wildcards: gene=ENSG00000113763 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000153310_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153310_fitted_models.rds + jobid: 7065 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153310_fitted_models.rds + wildcards: gene=ENSG00000153310 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000110917_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000110917_fitted_models.rds + jobid: 9880 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000110917_fitted_models.rds + wildcards: gene=ENSG00000110917 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000102317_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102317_fitted_models.rds + jobid: 6220 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102317_fitted_models.rds + wildcards: gene=ENSG00000102317 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000089220_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000089220_fitted_models.rds + jobid: 9851 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000089220_fitted_models.rds + wildcards: gene=ENSG00000089220 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000173698_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173698_fitted_models.rds + jobid: 6142 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173698_fitted_models.rds + wildcards: gene=ENSG00000173698 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000188038_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188038_fitted_models.rds + jobid: 11748 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188038_fitted_models.rds + wildcards: gene=ENSG00000188038 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000184207_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184207_fitted_models.rds + jobid: 11298 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184207_fitted_models.rds + wildcards: gene=ENSG00000184207 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000108479_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108479_fitted_models.rds + jobid: 12700 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108479_fitted_models.rds + wildcards: gene=ENSG00000108479 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000168748_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168748_fitted_models.rds + jobid: 11711 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168748_fitted_models.rds + wildcards: gene=ENSG00000168748 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000168077_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168077_fitted_models.rds + jobid: 6728 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168077_fitted_models.rds + wildcards: gene=ENSG00000168077 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000141279_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141279_fitted_models.rds + jobid: 12476 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141279_fitted_models.rds + wildcards: gene=ENSG00000141279 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000137193_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137193_fitted_models.rds + jobid: 4902 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137193_fitted_models.rds + wildcards: gene=ENSG00000137193 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000142453_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142453_fitted_models.rds + jobid: 13740 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142453_fitted_models.rds + wildcards: gene=ENSG00000142453 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000127948_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000127948_fitted_models.rds + jobid: 5657 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000127948_fitted_models.rds + wildcards: gene=ENSG00000127948 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000177192_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177192_fitted_models.rds + jobid: 9954 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177192_fitted_models.rds + wildcards: gene=ENSG00000177192 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000116604_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116604_fitted_models.rds + jobid: 1053 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116604_fitted_models.rds + wildcards: gene=ENSG00000116604 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000149428_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000149428_fitted_models.rds + jobid: 8522 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000149428_fitted_models.rds + wildcards: gene=ENSG00000149428 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000120616_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000120616_fitted_models.rds + jobid: 8721 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000120616_fitted_models.rds + wildcards: gene=ENSG00000120616 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000236154_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000236154_fitted_models.rds + jobid: 8826 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000236154_fitted_models.rds + wildcards: gene=ENSG00000236154 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000064726_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000064726_fitted_models.rds + jobid: 11129 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000064726_fitted_models.rds + wildcards: gene=ENSG00000064726 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000106077_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106077_fitted_models.rds + jobid: 5636 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106077_fitted_models.rds + wildcards: gene=ENSG00000106077 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000124942_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124942_fitted_models.rds + jobid: 8095 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124942_fitted_models.rds + wildcards: gene=ENSG00000124942 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000124207_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124207_fitted_models.rds + jobid: 13361 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124207_fitted_models.rds + wildcards: gene=ENSG00000124207 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198963_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198963_fitted_models.rds + jobid: 7357 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198963_fitted_models.rds + wildcards: gene=ENSG00000198963 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000117984_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117984_fitted_models.rds + jobid: 7812 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117984_fitted_models.rds + wildcards: gene=ENSG00000117984 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000175334_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175334_fitted_models.rds + jobid: 8217 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175334_fitted_models.rds + wildcards: gene=ENSG00000175334 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000169813_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169813_fitted_models.rds + jobid: 8742 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169813_fitted_models.rds + wildcards: gene=ENSG00000169813 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000177370_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177370_fitted_models.rds + jobid: 11943 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177370_fitted_models.rds + wildcards: gene=ENSG00000177370 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000011422_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000011422_fitted_models.rds + jobid: 14236 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000011422_fitted_models.rds + wildcards: gene=ENSG00000011422 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000088448_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000088448_fitted_models.rds + jobid: 10220 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000088448_fitted_models.rds + wildcards: gene=ENSG00000088448 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000132749_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132749_fitted_models.rds + jobid: 8284 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132749_fitted_models.rds + wildcards: gene=ENSG00000132749 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167553_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167553_fitted_models.rds + jobid: 9450 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167553_fitted_models.rds + wildcards: gene=ENSG00000167553 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000255135_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000255135_fitted_models.rds + jobid: 8351 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000255135_fitted_models.rds + wildcards: gene=ENSG00000255135 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000079150_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000079150_fitted_models.rds + jobid: 2215 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000079150_fitted_models.rds + wildcards: gene=ENSG00000079150 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000116005_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116005_fitted_models.rds + jobid: 1823 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116005_fitted_models.rds + wildcards: gene=ENSG00000116005 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000130643_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130643_fitted_models.rds + jobid: 9178 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130643_fitted_models.rds + wildcards: gene=ENSG00000130643 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000113369_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113369_fitted_models.rds + jobid: 4164 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113369_fitted_models.rds + wildcards: gene=ENSG00000113369 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000257151_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000257151_fitted_models.rds + jobid: 10739 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000257151_fitted_models.rds + wildcards: gene=ENSG00000257151 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000260834_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000260834_fitted_models.rds + jobid: 11702 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000260834_fitted_models.rds + wildcards: gene=ENSG00000260834 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000102595_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102595_fitted_models.rds + jobid: 10180 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102595_fitted_models.rds + wildcards: gene=ENSG00000102595 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000138593_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138593_fitted_models.rds + jobid: 10876 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138593_fitted_models.rds + wildcards: gene=ENSG00000138593 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000004779_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000004779_fitted_models.rds + jobid: 11482 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000004779_fitted_models.rds + wildcards: gene=ENSG00000004779 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000138495_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138495_fitted_models.rds + jobid: 2986 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138495_fitted_models.rds + wildcards: gene=ENSG00000138495 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000099331_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099331_fitted_models.rds + jobid: 13875 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099331_fitted_models.rds + wildcards: gene=ENSG00000099331 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000124787_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124787_fitted_models.rds + jobid: 4598 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124787_fitted_models.rds + wildcards: gene=ENSG00000124787 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163399_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163399_fitted_models.rds + jobid: 834 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163399_fitted_models.rds + wildcards: gene=ENSG00000163399 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000166260_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166260_fitted_models.rds + jobid: 12539 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166260_fitted_models.rds + wildcards: gene=ENSG00000166260 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000232859_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000232859_fitted_models.rds + jobid: 12199 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000232859_fitted_models.rds + wildcards: gene=ENSG00000232859 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000260924_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000260924_fitted_models.rds + jobid: 14656 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000260924_fitted_models.rds + wildcards: gene=ENSG00000260924 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000160801_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160801_fitted_models.rds + jobid: 2704 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160801_fitted_models.rds + wildcards: gene=ENSG00000160801 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000118058_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000118058_fitted_models.rds + jobid: 8508 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000118058_fitted_models.rds + wildcards: gene=ENSG00000118058 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000131876_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131876_fitted_models.rds + jobid: 11205 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131876_fitted_models.rds + wildcards: gene=ENSG00000131876 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163958_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163958_fitted_models.rds + jobid: 3311 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163958_fitted_models.rds + wildcards: gene=ENSG00000163958 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000096717_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000096717_fitted_models.rds + jobid: 8808 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000096717_fitted_models.rds + wildcards: gene=ENSG00000096717 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163257_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163257_fitted_models.rds + jobid: 3442 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163257_fitted_models.rds + wildcards: gene=ENSG00000163257 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000161671_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000161671_fitted_models.rds + jobid: 14425 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000161671_fitted_models.rds + wildcards: gene=ENSG00000161671 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000122779_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000122779_fitted_models.rds + jobid: 5961 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000122779_fitted_models.rds + wildcards: gene=ENSG00000122779 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167526_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167526_fitted_models.rds + jobid: 11913 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167526_fitted_models.rds + wildcards: gene=ENSG00000167526 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000184489_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184489_fitted_models.rds + jobid: 7089 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184489_fitted_models.rds + wildcards: gene=ENSG00000184489 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000168385_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168385_fitted_models.rds + jobid: 2487 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168385_fitted_models.rds + wildcards: gene=ENSG00000168385 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000170425_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170425_fitted_models.rds + jobid: 12132 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170425_fitted_models.rds + wildcards: gene=ENSG00000170425 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000128283_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128283_fitted_models.rds + jobid: 14838 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128283_fitted_models.rds + wildcards: gene=ENSG00000128283 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000078043_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000078043_fitted_models.rds + jobid: 12964 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000078043_fitted_models.rds + wildcards: gene=ENSG00000078043 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000125878_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125878_fitted_models.rds + jobid: 13079 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125878_fitted_models.rds + wildcards: gene=ENSG00000125878 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:45 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000136238_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136238_fitted_models.rds + jobid: 5415 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136238_fitted_models.rds + wildcards: gene=ENSG00000136238 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000182180_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182180_fitted_models.rds + jobid: 8859 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182180_fitted_models.rds + wildcards: gene=ENSG00000182180 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000107779_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107779_fitted_models.rds + jobid: 8913 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107779_fitted_models.rds + wildcards: gene=ENSG00000107779 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000104408_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104408_fitted_models.rds + jobid: 7008 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104408_fitted_models.rds + wildcards: gene=ENSG00000104408 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000137038_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137038_fitted_models.rds + jobid: 7200 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137038_fitted_models.rds + wildcards: gene=ENSG00000137038 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000178252_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000178252_fitted_models.rds + jobid: 2743 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000178252_fitted_models.rds + wildcards: gene=ENSG00000178252 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000165494_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165494_fitted_models.rds + jobid: 8378 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165494_fitted_models.rds + wildcards: gene=ENSG00000165494 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000135390_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135390_fitted_models.rds + jobid: 9512 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135390_fitted_models.rds + wildcards: gene=ENSG00000135390 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000165644_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165644_fitted_models.rds + jobid: 8882 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165644_fitted_models.rds + wildcards: gene=ENSG00000165644 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000103274_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000103274_fitted_models.rds + jobid: 11396 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000103274_fitted_models.rds + wildcards: gene=ENSG00000103274 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000078328_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000078328_fitted_models.rds + jobid: 11382 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000078328_fitted_models.rds + wildcards: gene=ENSG00000078328 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000115561_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115561_fitted_models.rds + jobid: 1911 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115561_fitted_models.rds + wildcards: gene=ENSG00000115561 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000184384_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184384_fitted_models.rds + jobid: 8421 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184384_fitted_models.rds + wildcards: gene=ENSG00000184384 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000038274_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000038274_fitted_models.rds + jobid: 4460 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000038274_fitted_models.rds + wildcards: gene=ENSG00000038274 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000076201_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000076201_fitted_models.rds + jobid: 2712 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000076201_fitted_models.rds + wildcards: gene=ENSG00000076201 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000074319_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000074319_fitted_models.rds + jobid: 7923 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000074319_fitted_models.rds + wildcards: gene=ENSG00000074319 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000122140_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000122140_fitted_models.rds + jobid: 7700 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000122140_fitted_models.rds + wildcards: gene=ENSG00000122140 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000169714_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169714_fitted_models.rds + jobid: 3053 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169714_fitted_models.rds + wildcards: gene=ENSG00000169714 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000185043_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185043_fitted_models.rds + jobid: 11165 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185043_fitted_models.rds + wildcards: gene=ENSG00000185043 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000115053_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115053_fitted_models.rds + jobid: 2429 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115053_fitted_models.rds + wildcards: gene=ENSG00000115053 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000133398_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133398_fitted_models.rds + jobid: 3923 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133398_fitted_models.rds + wildcards: gene=ENSG00000133398 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000154134_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000154134_fitted_models.rds + jobid: 8559 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000154134_fitted_models.rds + wildcards: gene=ENSG00000154134 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167986_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167986_fitted_models.rds + jobid: 8072 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167986_fitted_models.rds + wildcards: gene=ENSG00000167986 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164758_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164758_fitted_models.rds + jobid: 7021 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164758_fitted_models.rds + wildcards: gene=ENSG00000164758 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000085224_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000085224_fitted_models.rds + jobid: 6349 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000085224_fitted_models.rds + wildcards: gene=ENSG00000085224 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000105618_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105618_fitted_models.rds + jobid: 14497 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105618_fitted_models.rds + wildcards: gene=ENSG00000105618 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000122687_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000122687_fitted_models.rds + jobid: 5382 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000122687_fitted_models.rds + wildcards: gene=ENSG00000122687 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000134825_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134825_fitted_models.rds + jobid: 8085 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134825_fitted_models.rds + wildcards: gene=ENSG00000134825 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000204304_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204304_fitted_models.rds + jobid: 4824 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204304_fitted_models.rds + wildcards: gene=ENSG00000204304 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000227627_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000227627_fitted_models.rds + jobid: 5299 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000227627_fitted_models.rds + wildcards: gene=ENSG00000227627 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000086065_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000086065_fitted_models.rds + jobid: 7248 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000086065_fitted_models.rds + wildcards: gene=ENSG00000086065 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000073584_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000073584_fitted_models.rds + jobid: 12348 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000073584_fitted_models.rds + wildcards: gene=ENSG00000073584 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000264575_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000264575_fitted_models.rds + jobid: 12853 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000264575_fitted_models.rds + wildcards: gene=ENSG00000264575 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100604_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100604_fitted_models.rds + jobid: 10627 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100604_fitted_models.rds + wildcards: gene=ENSG00000100604 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000197119_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197119_fitted_models.rds + jobid: 10672 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197119_fitted_models.rds + wildcards: gene=ENSG00000197119 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000105289_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105289_fitted_models.rds + jobid: 13581 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105289_fitted_models.rds + wildcards: gene=ENSG00000105289 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000139174_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000139174_fitted_models.rds + jobid: 9401 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000139174_fitted_models.rds + wildcards: gene=ENSG00000139174 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000129084_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000129084_fitted_models.rds + jobid: 7902 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000129084_fitted_models.rds + wildcards: gene=ENSG00000129084 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000277203_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000277203_fitted_models.rds + jobid: 6604 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000277203_fitted_models.rds + wildcards: gene=ENSG00000277203 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000166710_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166710_fitted_models.rds + jobid: 10859 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166710_fitted_models.rds + wildcards: gene=ENSG00000166710 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163714_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163714_fitted_models.rds + jobid: 3126 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163714_fitted_models.rds + wildcards: gene=ENSG00000163714 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000160932_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160932_fitted_models.rds + jobid: 7098 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160932_fitted_models.rds + wildcards: gene=ENSG00000160932 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000130558_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130558_fitted_models.rds + jobid: 7696 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130558_fitted_models.rds + wildcards: gene=ENSG00000130558 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000117569_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117569_fitted_models.rds + jobid: 729 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117569_fitted_models.rds + wildcards: gene=ENSG00000117569 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000114354_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114354_fitted_models.rds + jobid: 2932 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114354_fitted_models.rds + wildcards: gene=ENSG00000114354 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000147677_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147677_fitted_models.rds + jobid: 7016 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147677_fitted_models.rds + wildcards: gene=ENSG00000147677 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000184009_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184009_fitted_models.rds + jobid: 12779 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184009_fitted_models.rds + wildcards: gene=ENSG00000184009 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000182774_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182774_fitted_models.rds + jobid: 11120 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182774_fitted_models.rds + wildcards: gene=ENSG00000182774 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000108641_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108641_fitted_models.rds + jobid: 12179 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108641_fitted_models.rds + wildcards: gene=ENSG00000108641 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000138442_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138442_fitted_models.rds + jobid: 2307 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138442_fitted_models.rds + wildcards: gene=ENSG00000138442 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000162300_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162300_fitted_models.rds + jobid: 8174 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162300_fitted_models.rds + wildcards: gene=ENSG00000162300 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000166562_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166562_fitted_models.rds + jobid: 13010 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166562_fitted_models.rds + wildcards: gene=ENSG00000166562 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000158164_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000158164_fitted_models.rds + jobid: 6394 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000158164_fitted_models.rds + wildcards: gene=ENSG00000158164 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000177674_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177674_fitted_models.rds + jobid: 139 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177674_fitted_models.rds + wildcards: gene=ENSG00000177674 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000150456_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000150456_fitted_models.rds + jobid: 9984 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000150456_fitted_models.rds + wildcards: gene=ENSG00000150456 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000129474_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000129474_fitted_models.rds + jobid: 10275 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000129474_fitted_models.rds + wildcards: gene=ENSG00000129474 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000206557_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000206557_fitted_models.rds + jobid: 2619 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000206557_fitted_models.rds + wildcards: gene=ENSG00000206557 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000140105_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140105_fitted_models.rds + jobid: 10673 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140105_fitted_models.rds + wildcards: gene=ENSG00000140105 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000138794_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138794_fitted_models.rds + jobid: 3694 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138794_fitted_models.rds + wildcards: gene=ENSG00000138794 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000063245_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000063245_fitted_models.rds + jobid: 14541 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000063245_fitted_models.rds + wildcards: gene=ENSG00000063245 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000284526_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000284526_fitted_models.rds + jobid: 15207 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000284526_fitted_models.rds + wildcards: gene=ENSG00000284526 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000119185_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119185_fitted_models.rds + jobid: 1534 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119185_fitted_models.rds + wildcards: gene=ENSG00000119185 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000185885_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185885_fitted_models.rds + jobid: 7769 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185885_fitted_models.rds + wildcards: gene=ENSG00000185885 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000138138_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138138_fitted_models.rds + jobid: 8922 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138138_fitted_models.rds + wildcards: gene=ENSG00000138138 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000114126_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114126_fitted_models.rds + jobid: 3117 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114126_fitted_models.rds + wildcards: gene=ENSG00000114126 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000113583_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113583_fitted_models.rds + jobid: 4283 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113583_fitted_models.rds + wildcards: gene=ENSG00000113583 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100413_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100413_fitted_models.rds + jobid: 14909 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100413_fitted_models.rds + wildcards: gene=ENSG00000100413 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000231925_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000231925_fitted_models.rds + jobid: 4853 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000231925_fitted_models.rds + wildcards: gene=ENSG00000231925 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000205339_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000205339_fitted_models.rds + jobid: 7872 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000205339_fitted_models.rds + wildcards: gene=ENSG00000205339 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000102606_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102606_fitted_models.rds + jobid: 10221 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102606_fitted_models.rds + wildcards: gene=ENSG00000102606 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163755_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163755_fitted_models.rds + jobid: 3138 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163755_fitted_models.rds + wildcards: gene=ENSG00000163755 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000168078_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168078_fitted_models.rds + jobid: 6731 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168078_fitted_models.rds + wildcards: gene=ENSG00000168078 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000184840_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184840_fitted_models.rds + jobid: 4528 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184840_fitted_models.rds + wildcards: gene=ENSG00000184840 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000081913_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000081913_fitted_models.rds + jobid: 13021 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000081913_fitted_models.rds + wildcards: gene=ENSG00000081913 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000099795_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099795_fitted_models.rds + jobid: 13845 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099795_fitted_models.rds + wildcards: gene=ENSG00000099795 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000112759_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112759_fitted_models.rds + jobid: 4980 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112759_fitted_models.rds + wildcards: gene=ENSG00000112759 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000197982_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197982_fitted_models.rds + jobid: 419 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197982_fitted_models.rds + wildcards: gene=ENSG00000197982 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000078668_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000078668_fitted_models.rds + jobid: 6798 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000078668_fitted_models.rds + wildcards: gene=ENSG00000078668 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000127337_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000127337_fitted_models.rds + jobid: 9645 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000127337_fitted_models.rds + wildcards: gene=ENSG00000127337 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000119707_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119707_fitted_models.rds + jobid: 10530 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119707_fitted_models.rds + wildcards: gene=ENSG00000119707 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000091164_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000091164_fitted_models.rds + jobid: 12996 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000091164_fitted_models.rds + wildcards: gene=ENSG00000091164 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000137100_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137100_fitted_models.rds + jobid: 7267 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137100_fitted_models.rds + wildcards: gene=ENSG00000137100 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000138175_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138175_fitted_models.rds + jobid: 9048 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138175_fitted_models.rds + wildcards: gene=ENSG00000138175 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164904_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164904_fitted_models.rds + jobid: 4248 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164904_fitted_models.rds + wildcards: gene=ENSG00000164904 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000118816_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000118816_fitted_models.rds + jobid: 3585 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000118816_fitted_models.rds + wildcards: gene=ENSG00000118816 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164442_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164442_fitted_models.rds + jobid: 5259 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164442_fitted_models.rds + wildcards: gene=ENSG00000164442 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000168255_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168255_fitted_models.rds + jobid: 5822 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168255_fitted_models.rds + wildcards: gene=ENSG00000168255 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000262814_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000262814_fitted_models.rds + jobid: 12789 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000262814_fitted_models.rds + wildcards: gene=ENSG00000262814 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000196092_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196092_fitted_models.rds + jobid: 7304 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196092_fitted_models.rds + wildcards: gene=ENSG00000196092 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000146376_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000146376_fitted_models.rds + jobid: 5218 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000146376_fitted_models.rds + wildcards: gene=ENSG00000146376 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000157881_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000157881_fitted_models.rds + jobid: 59 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000157881_fitted_models.rds + wildcards: gene=ENSG00000157881 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000150867_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000150867_fitted_models.rds + jobid: 8688 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000150867_fitted_models.rds + wildcards: gene=ENSG00000150867 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000035115_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000035115_fitted_models.rds + jobid: 1509 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000035115_fitted_models.rds + wildcards: gene=ENSG00000035115 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000183943_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183943_fitted_models.rds + jobid: 6094 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183943_fitted_models.rds + wildcards: gene=ENSG00000183943 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000172809_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172809_fitted_models.rds + jobid: 12664 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172809_fitted_models.rds + wildcards: gene=ENSG00000172809 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000161970_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000161970_fitted_models.rds + jobid: 12100 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000161970_fitted_models.rds + wildcards: gene=ENSG00000161970 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000188505_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188505_fitted_models.rds + jobid: 14151 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188505_fitted_models.rds + wildcards: gene=ENSG00000188505 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000138095_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138095_fitted_models.rds + jobid: 1713 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138095_fitted_models.rds + wildcards: gene=ENSG00000138095 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000104728_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104728_fitted_models.rds + jobid: 6622 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104728_fitted_models.rds + wildcards: gene=ENSG00000104728 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000277972_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000277972_fitted_models.rds + jobid: 12310 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000277972_fitted_models.rds + wildcards: gene=ENSG00000277972 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000120992_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000120992_fitted_models.rds + jobid: 6820 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000120992_fitted_models.rds + wildcards: gene=ENSG00000120992 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000139168_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000139168_fitted_models.rds + jobid: 9400 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000139168_fitted_models.rds + wildcards: gene=ENSG00000139168 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000135451_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135451_fitted_models.rds + jobid: 9451 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135451_fitted_models.rds + wildcards: gene=ENSG00000135451 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000156697_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000156697_fitted_models.rds + jobid: 6490 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000156697_fitted_models.rds + wildcards: gene=ENSG00000156697 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000170632_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170632_fitted_models.rds + jobid: 5828 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170632_fitted_models.rds + wildcards: gene=ENSG00000170632 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000113361_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113361_fitted_models.rds + jobid: 3959 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113361_fitted_models.rds + wildcards: gene=ENSG00000113361 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000006459_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000006459_fitted_models.rds + jobid: 5976 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000006459_fitted_models.rds + wildcards: gene=ENSG00000006459 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000127481_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000127481_fitted_models.rds + jobid: 195 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000127481_fitted_models.rds + wildcards: gene=ENSG00000127481 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163170_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163170_fitted_models.rds + jobid: 1854 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163170_fitted_models.rds + wildcards: gene=ENSG00000163170 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000107854_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107854_fitted_models.rds + jobid: 8942 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107854_fitted_models.rds + wildcards: gene=ENSG00000107854 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000077312_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000077312_fitted_models.rds + jobid: 14190 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000077312_fitted_models.rds + wildcards: gene=ENSG00000077312 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000165775_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165775_fitted_models.rds + jobid: 6605 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165775_fitted_models.rds + wildcards: gene=ENSG00000165775 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000170345_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170345_fitted_models.rds + jobid: 10566 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170345_fitted_models.rds + wildcards: gene=ENSG00000170345 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000276116_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000276116_fitted_models.rds + jobid: 10491 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000276116_fitted_models.rds + wildcards: gene=ENSG00000276116 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000117899_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117899_fitted_models.rds + jobid: 11109 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117899_fitted_models.rds + wildcards: gene=ENSG00000117899 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000132388_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132388_fitted_models.rds + jobid: 11988 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132388_fitted_models.rds + wildcards: gene=ENSG00000132388 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000253230_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000253230_fitted_models.rds + jobid: 6642 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000253230_fitted_models.rds + wildcards: gene=ENSG00000253230 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000182175_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182175_fitted_models.rds + jobid: 11186 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182175_fitted_models.rds + wildcards: gene=ENSG00000182175 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000130313_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130313_fitted_models.rds + jobid: 13893 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130313_fitted_models.rds + wildcards: gene=ENSG00000130313 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000143622_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143622_fitted_models.rds + jobid: 1031 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143622_fitted_models.rds + wildcards: gene=ENSG00000143622 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000011638_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000011638_fitted_models.rds + jobid: 11463 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000011638_fitted_models.rds + wildcards: gene=ENSG00000011638 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000114023_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114023_fitted_models.rds + jobid: 3005 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114023_fitted_models.rds + wildcards: gene=ENSG00000114023 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100836_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100836_fitted_models.rds + jobid: 10287 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100836_fitted_models.rds + wildcards: gene=ENSG00000100836 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000095787_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000095787_fitted_models.rds + jobid: 8709 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000095787_fitted_models.rds + wildcards: gene=ENSG00000095787 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000172247_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172247_fitted_models.rds + jobid: 8032 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172247_fitted_models.rds + wildcards: gene=ENSG00000172247 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000134884_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134884_fitted_models.rds + jobid: 10207 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134884_fitted_models.rds + wildcards: gene=ENSG00000134884 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000272686_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000272686_fitted_models.rds + jobid: 5895 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000272686_fitted_models.rds + wildcards: gene=ENSG00000272686 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000138071_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138071_fitted_models.rds + jobid: 1796 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138071_fitted_models.rds + wildcards: gene=ENSG00000138071 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000159228_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000159228_fitted_models.rds + jobid: 15078 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000159228_fitted_models.rds + wildcards: gene=ENSG00000159228 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000166797_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166797_fitted_models.rds + jobid: 10954 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166797_fitted_models.rds + wildcards: gene=ENSG00000166797 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000135720_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135720_fitted_models.rds + jobid: 11708 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135720_fitted_models.rds + wildcards: gene=ENSG00000135720 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000072803_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000072803_fitted_models.rds + jobid: 4476 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000072803_fitted_models.rds + wildcards: gene=ENSG00000072803 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000141858_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141858_fitted_models.rds + jobid: 13833 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141858_fitted_models.rds + wildcards: gene=ENSG00000141858 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000092758_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000092758_fitted_models.rds + jobid: 13440 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000092758_fitted_models.rds + wildcards: gene=ENSG00000092758 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000144395_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000144395_fitted_models.rds + jobid: 2264 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000144395_fitted_models.rds + wildcards: gene=ENSG00000144395 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000072954_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000072954_fitted_models.rds + jobid: 13871 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000072954_fitted_models.rds + wildcards: gene=ENSG00000072954 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000197535_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197535_fitted_models.rds + jobid: 10903 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197535_fitted_models.rds + wildcards: gene=ENSG00000197535 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000160209_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160209_fitted_models.rds + jobid: 15130 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160209_fitted_models.rds + wildcards: gene=ENSG00000160209 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000172053_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172053_fitted_models.rds + jobid: 2748 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172053_fitted_models.rds + wildcards: gene=ENSG00000172053 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000196683_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196683_fitted_models.rds + jobid: 5460 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196683_fitted_models.rds + wildcards: gene=ENSG00000196683 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000162599_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162599_fitted_models.rds + jobid: 597 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162599_fitted_models.rds + wildcards: gene=ENSG00000162599 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000234779_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000234779_fitted_models.rds + jobid: 7211 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000234779_fitted_models.rds + wildcards: gene=ENSG00000234779 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000144848_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000144848_fitted_models.rds + jobid: 2960 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000144848_fitted_models.rds + wildcards: gene=ENSG00000144848 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167378_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167378_fitted_models.rds + jobid: 14232 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167378_fitted_models.rds + wildcards: gene=ENSG00000167378 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000165458_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165458_fitted_models.rds + jobid: 8312 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165458_fitted_models.rds + wildcards: gene=ENSG00000165458 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000143256_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143256_fitted_models.rds + jobid: 1092 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143256_fitted_models.rds + wildcards: gene=ENSG00000143256 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:46 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100027_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100027_fitted_models.rds + jobid: 14698 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100027_fitted_models.rds + wildcards: gene=ENSG00000100027 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000138336_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138336_fitted_models.rds + jobid: 8816 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138336_fitted_models.rds + wildcards: gene=ENSG00000138336 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000132823_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132823_fitted_models.rds + jobid: 13309 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132823_fitted_models.rds + wildcards: gene=ENSG00000132823 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000172818_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172818_fitted_models.rds + jobid: 8204 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172818_fitted_models.rds + wildcards: gene=ENSG00000172818 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000106399_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106399_fitted_models.rds + jobid: 5428 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106399_fitted_models.rds + wildcards: gene=ENSG00000106399 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000056998_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000056998_fitted_models.rds + jobid: 6090 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000056998_fitted_models.rds + wildcards: gene=ENSG00000056998 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000177600_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177600_fitted_models.rds + jobid: 7798 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177600_fitted_models.rds + wildcards: gene=ENSG00000177600 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000161888_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000161888_fitted_models.rds + jobid: 13745 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000161888_fitted_models.rds + wildcards: gene=ENSG00000161888 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000184445_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184445_fitted_models.rds + jobid: 9908 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184445_fitted_models.rds + wildcards: gene=ENSG00000184445 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000224899_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000224899_fitted_models.rds + jobid: 5899 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000224899_fitted_models.rds + wildcards: gene=ENSG00000224899 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000241399_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000241399_fitted_models.rds + jobid: 2140 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000241399_fitted_models.rds + wildcards: gene=ENSG00000241399 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000169093_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169093_fitted_models.rds + jobid: 6083 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169093_fitted_models.rds + wildcards: gene=ENSG00000169093 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000149547_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000149547_fitted_models.rds + jobid: 8564 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000149547_fitted_models.rds + wildcards: gene=ENSG00000149547 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000101052_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101052_fitted_models.rds + jobid: 13306 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101052_fitted_models.rds + wildcards: gene=ENSG00000101052 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000144857_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000144857_fitted_models.rds + jobid: 2966 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000144857_fitted_models.rds + wildcards: gene=ENSG00000144857 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000145912_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145912_fitted_models.rds + jobid: 4533 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145912_fitted_models.rds + wildcards: gene=ENSG00000145912 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000065154_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000065154_fitted_models.rds + jobid: 9139 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000065154_fitted_models.rds + wildcards: gene=ENSG00000065154 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000161016_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000161016_fitted_models.rds + jobid: 7163 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000161016_fitted_models.rds + wildcards: gene=ENSG00000161016 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000101347_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101347_fitted_models.rds + jobid: 13276 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101347_fitted_models.rds + wildcards: gene=ENSG00000101347 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000128309_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128309_fitted_models.rds + jobid: 14832 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128309_fitted_models.rds + wildcards: gene=ENSG00000128309 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000177679_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177679_fitted_models.rds + jobid: 5661 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177679_fitted_models.rds + wildcards: gene=ENSG00000177679 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000160285_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160285_fitted_models.rds + jobid: 15162 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160285_fitted_models.rds + wildcards: gene=ENSG00000160285 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000123179_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000123179_fitted_models.rds + jobid: 10109 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000123179_fitted_models.rds + wildcards: gene=ENSG00000123179 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000117724_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117724_fitted_models.rds + jobid: 1349 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117724_fitted_models.rds + wildcards: gene=ENSG00000117724 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000128594_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128594_fitted_models.rds + jobid: 5908 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128594_fitted_models.rds + wildcards: gene=ENSG00000128594 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000115758_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115758_fitted_models.rds + jobid: 1549 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115758_fitted_models.rds + wildcards: gene=ENSG00000115758 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000162337_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162337_fitted_models.rds + jobid: 8281 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162337_fitted_models.rds + wildcards: gene=ENSG00000162337 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000215021_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000215021_fitted_models.rds + jobid: 9261 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000215021_fitted_models.rds + wildcards: gene=ENSG00000215021 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167595_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167595_fitted_models.rds + jobid: 14063 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167595_fitted_models.rds + wildcards: gene=ENSG00000167595 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000162512_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162512_fitted_models.rds + jobid: 333 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162512_fitted_models.rds + wildcards: gene=ENSG00000162512 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000196449_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196449_fitted_models.rds + jobid: 418 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196449_fitted_models.rds + wildcards: gene=ENSG00000196449 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000178222_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000178222_fitted_models.rds + jobid: 3356 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000178222_fitted_models.rds + wildcards: gene=ENSG00000178222 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000038427_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000038427_fitted_models.rds + jobid: 4147 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000038427_fitted_models.rds + wildcards: gene=ENSG00000038427 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000138613_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138613_fitted_models.rds + jobid: 10948 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138613_fitted_models.rds + wildcards: gene=ENSG00000138613 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000141425_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141425_fitted_models.rds + jobid: 12942 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141425_fitted_models.rds + wildcards: gene=ENSG00000141425 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000088325_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000088325_fitted_models.rds + jobid: 13210 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000088325_fitted_models.rds + wildcards: gene=ENSG00000088325 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000177917_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177917_fitted_models.rds + jobid: 2122 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177917_fitted_models.rds + wildcards: gene=ENSG00000177917 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000130731_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130731_fitted_models.rds + jobid: 11234 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130731_fitted_models.rds + wildcards: gene=ENSG00000130731 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000180773_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000180773_fitted_models.rds + jobid: 8401 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000180773_fitted_models.rds + wildcards: gene=ENSG00000180773 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164548_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164548_fitted_models.rds + jobid: 5469 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164548_fitted_models.rds + wildcards: gene=ENSG00000164548 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000125962_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125962_fitted_models.rds + jobid: 6395 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125962_fitted_models.rds + wildcards: gene=ENSG00000125962 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000247595_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000247595_fitted_models.rds + jobid: 7925 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000247595_fitted_models.rds + wildcards: gene=ENSG00000247595 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000183783_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183783_fitted_models.rds + jobid: 3496 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183783_fitted_models.rds + wildcards: gene=ENSG00000183783 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000133983_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133983_fitted_models.rds + jobid: 10516 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133983_fitted_models.rds + wildcards: gene=ENSG00000133983 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000197448_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197448_fitted_models.rds + jobid: 5995 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197448_fitted_models.rds + wildcards: gene=ENSG00000197448 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000170421_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170421_fitted_models.rds + jobid: 9489 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170421_fitted_models.rds + wildcards: gene=ENSG00000170421 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000171160_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171160_fitted_models.rds + jobid: 8988 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171160_fitted_models.rds + wildcards: gene=ENSG00000171160 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000060491_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000060491_fitted_models.rds + jobid: 13439 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000060491_fitted_models.rds + wildcards: gene=ENSG00000060491 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000160124_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160124_fitted_models.rds + jobid: 3004 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160124_fitted_models.rds + wildcards: gene=ENSG00000160124 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000069998_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000069998_fitted_models.rds + jobid: 14638 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000069998_fitted_models.rds + wildcards: gene=ENSG00000069998 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000206053_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000206053_fitted_models.rds + jobid: 11267 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000206053_fitted_models.rds + wildcards: gene=ENSG00000206053 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000123739_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000123739_fitted_models.rds + jobid: 3695 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000123739_fitted_models.rds + wildcards: gene=ENSG00000123739 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000205544_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000205544_fitted_models.rds + jobid: 12058 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000205544_fitted_models.rds + wildcards: gene=ENSG00000205544 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164841_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164841_fitted_models.rds + jobid: 7010 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164841_fitted_models.rds + wildcards: gene=ENSG00000164841 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000183431_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183431_fitted_models.rds + jobid: 422 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183431_fitted_models.rds + wildcards: gene=ENSG00000183431 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000136944_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136944_fitted_models.rds + jobid: 7575 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136944_fitted_models.rds + wildcards: gene=ENSG00000136944 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000141552_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141552_fitted_models.rds + jobid: 12796 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141552_fitted_models.rds + wildcards: gene=ENSG00000141552 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000089063_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000089063_fitted_models.rds + jobid: 13129 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000089063_fitted_models.rds + wildcards: gene=ENSG00000089063 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000090520_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000090520_fitted_models.rds + jobid: 3274 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000090520_fitted_models.rds + wildcards: gene=ENSG00000090520 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000187325_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000187325_fitted_models.rds + jobid: 6354 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000187325_fitted_models.rds + wildcards: gene=ENSG00000187325 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000126458_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000126458_fitted_models.rds + jobid: 14396 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000126458_fitted_models.rds + wildcards: gene=ENSG00000126458 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000120256_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000120256_fitted_models.rds + jobid: 5289 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000120256_fitted_models.rds + wildcards: gene=ENSG00000120256 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000205981_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000205981_fitted_models.rds + jobid: 3234 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000205981_fitted_models.rds + wildcards: gene=ENSG00000205981 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000114374_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114374_fitted_models.rds + jobid: 14627 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114374_fitted_models.rds + wildcards: gene=ENSG00000114374 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000135870_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135870_fitted_models.rds + jobid: 1164 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135870_fitted_models.rds + wildcards: gene=ENSG00000135870 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000178982_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000178982_fitted_models.rds + jobid: 14134 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000178982_fitted_models.rds + wildcards: gene=ENSG00000178982 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000279816_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000279816_fitted_models.rds + jobid: 11697 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000279816_fitted_models.rds + wildcards: gene=ENSG00000279816 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000079931_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000079931_fitted_models.rds + jobid: 5228 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000079931_fitted_models.rds + wildcards: gene=ENSG00000079931 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100664_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100664_fitted_models.rds + jobid: 10694 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100664_fitted_models.rds + wildcards: gene=ENSG00000100664 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000172301_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172301_fitted_models.rds + jobid: 12256 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172301_fitted_models.rds + wildcards: gene=ENSG00000172301 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000272168_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000272168_fitted_models.rds + jobid: 4659 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000272168_fitted_models.rds + wildcards: gene=ENSG00000272168 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000140990_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140990_fitted_models.rds + jobid: 11279 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140990_fitted_models.rds + wildcards: gene=ENSG00000140990 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000128052_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128052_fitted_models.rds + jobid: 3525 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128052_fitted_models.rds + wildcards: gene=ENSG00000128052 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000211772_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000211772_fitted_models.rds + jobid: 5992 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000211772_fitted_models.rds + wildcards: gene=ENSG00000211772 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000205302_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000205302_fitted_models.rds + jobid: 4241 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000205302_fitted_models.rds + wildcards: gene=ENSG00000205302 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000065135_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000065135_fitted_models.rds + jobid: 773 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000065135_fitted_models.rds + wildcards: gene=ENSG00000065135 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000267696_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000267696_fitted_models.rds + jobid: 13991 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000267696_fitted_models.rds + wildcards: gene=ENSG00000267696 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000146530_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000146530_fitted_models.rds + jobid: 5437 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000146530_fitted_models.rds + wildcards: gene=ENSG00000146530 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000120129_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000120129_fitted_models.rds + jobid: 4481 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000120129_fitted_models.rds + wildcards: gene=ENSG00000120129 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000080815_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000080815_fitted_models.rds + jobid: 10531 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000080815_fitted_models.rds + wildcards: gene=ENSG00000080815 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000104853_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104853_fitted_models.rds + jobid: 14270 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104853_fitted_models.rds + wildcards: gene=ENSG00000104853 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000157456_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000157456_fitted_models.rds + jobid: 10932 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000157456_fitted_models.rds + wildcards: gene=ENSG00000157456 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000134463_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134463_fitted_models.rds + jobid: 8639 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134463_fitted_models.rds + wildcards: gene=ENSG00000134463 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000082996_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000082996_fitted_models.rds + jobid: 3143 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000082996_fitted_models.rds + wildcards: gene=ENSG00000082996 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167272_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167272_fitted_models.rds + jobid: 9877 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167272_fitted_models.rds + wildcards: gene=ENSG00000167272 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000197746_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197746_fitted_models.rds + jobid: 8844 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197746_fitted_models.rds + wildcards: gene=ENSG00000197746 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000119711_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119711_fitted_models.rds + jobid: 10547 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119711_fitted_models.rds + wildcards: gene=ENSG00000119711 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000170448_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170448_fitted_models.rds + jobid: 3504 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170448_fitted_models.rds + wildcards: gene=ENSG00000170448 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000171735_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171735_fitted_models.rds + jobid: 96 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171735_fitted_models.rds + wildcards: gene=ENSG00000171735 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000014216_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000014216_fitted_models.rds + jobid: 8182 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000014216_fitted_models.rds + wildcards: gene=ENSG00000014216 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100473_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100473_fitted_models.rds + jobid: 10331 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100473_fitted_models.rds + wildcards: gene=ENSG00000100473 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000271860_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000271860_fitted_models.rds + jobid: 5109 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000271860_fitted_models.rds + wildcards: gene=ENSG00000271860 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000082258_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000082258_fitted_models.rds + jobid: 2089 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000082258_fitted_models.rds + wildcards: gene=ENSG00000082258 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164620_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164620_fitted_models.rds + jobid: 4373 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164620_fitted_models.rds + wildcards: gene=ENSG00000164620 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000080345_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000080345_fitted_models.rds + jobid: 2115 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000080345_fitted_models.rds + wildcards: gene=ENSG00000080345 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000125733_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125733_fitted_models.rds + jobid: 13651 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125733_fitted_models.rds + wildcards: gene=ENSG00000125733 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000147457_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147457_fitted_models.rds + jobid: 6705 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147457_fitted_models.rds + wildcards: gene=ENSG00000147457 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000183186_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183186_fitted_models.rds + jobid: 13478 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183186_fitted_models.rds + wildcards: gene=ENSG00000183186 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164265_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164265_fitted_models.rds + jobid: 4397 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164265_fitted_models.rds + wildcards: gene=ENSG00000164265 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000117877_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117877_fitted_models.rds + jobid: 14283 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117877_fitted_models.rds + wildcards: gene=ENSG00000117877 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000124795_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124795_fitted_models.rds + jobid: 4652 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124795_fitted_models.rds + wildcards: gene=ENSG00000124795 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000115129_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115129_fitted_models.rds + jobid: 1593 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115129_fitted_models.rds + wildcards: gene=ENSG00000115129 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000091409_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000091409_fitted_models.rds + jobid: 2185 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000091409_fitted_models.rds + wildcards: gene=ENSG00000091409 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000136603_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136603_fitted_models.rds + jobid: 3207 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136603_fitted_models.rds + wildcards: gene=ENSG00000136603 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000078140_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000078140_fitted_models.rds + jobid: 3481 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000078140_fitted_models.rds + wildcards: gene=ENSG00000078140 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000187079_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000187079_fitted_models.rds + jobid: 7895 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000187079_fitted_models.rds + wildcards: gene=ENSG00000187079 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000185847_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185847_fitted_models.rds + jobid: 9807 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185847_fitted_models.rds + wildcards: gene=ENSG00000185847 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000029153_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000029153_fitted_models.rds + jobid: 9361 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000029153_fitted_models.rds + wildcards: gene=ENSG00000029153 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000184672_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184672_fitted_models.rds + jobid: 6912 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184672_fitted_models.rds + wildcards: gene=ENSG00000184672 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000123144_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000123144_fitted_models.rds + jobid: 13793 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000123144_fitted_models.rds + wildcards: gene=ENSG00000123144 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000125835_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125835_fitted_models.rds + jobid: 13094 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125835_fitted_models.rds + wildcards: gene=ENSG00000125835 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000082212_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000082212_fitted_models.rds + jobid: 12982 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000082212_fitted_models.rds + wildcards: gene=ENSG00000082212 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000267321_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000267321_fitted_models.rds + jobid: 12281 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000267321_fitted_models.rds + wildcards: gene=ENSG00000267321 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000123353_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000123353_fitted_models.rds + jobid: 9532 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000123353_fitted_models.rds + wildcards: gene=ENSG00000123353 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163884_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163884_fitted_models.rds + jobid: 3034 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163884_fitted_models.rds + wildcards: gene=ENSG00000163884 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000174231_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000174231_fitted_models.rds + jobid: 11954 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000174231_fitted_models.rds + wildcards: gene=ENSG00000174231 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198960_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198960_fitted_models.rds + jobid: 6387 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198960_fitted_models.rds + wildcards: gene=ENSG00000198960 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000108010_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108010_fitted_models.rds + jobid: 9159 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108010_fitted_models.rds + wildcards: gene=ENSG00000108010 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000187772_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000187772_fitted_models.rds + jobid: 5123 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000187772_fitted_models.rds + wildcards: gene=ENSG00000187772 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000248329_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000248329_fitted_models.rds + jobid: 3826 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000248329_fitted_models.rds + wildcards: gene=ENSG00000248329 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000113845_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113845_fitted_models.rds + jobid: 2984 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113845_fitted_models.rds + wildcards: gene=ENSG00000113845 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000049656_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000049656_fitted_models.rds + jobid: 3912 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000049656_fitted_models.rds + wildcards: gene=ENSG00000049656 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000237190_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000237190_fitted_models.rds + jobid: 4291 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000237190_fitted_models.rds + wildcards: gene=ENSG00000237190 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000080824_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000080824_fitted_models.rds + jobid: 10681 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000080824_fitted_models.rds + wildcards: gene=ENSG00000080824 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000132963_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132963_fitted_models.rds + jobid: 10021 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132963_fitted_models.rds + wildcards: gene=ENSG00000132963 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000089737_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000089737_fitted_models.rds + jobid: 10639 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000089737_fitted_models.rds + wildcards: gene=ENSG00000089737 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000228474_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000228474_fitted_models.rds + jobid: 1619 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000228474_fitted_models.rds + wildcards: gene=ENSG00000228474 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000214078_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000214078_fitted_models.rds + jobid: 13257 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000214078_fitted_models.rds + wildcards: gene=ENSG00000214078 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000140905_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140905_fitted_models.rds + jobid: 11848 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140905_fitted_models.rds + wildcards: gene=ENSG00000140905 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000175895_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175895_fitted_models.rds + jobid: 6958 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175895_fitted_models.rds + wildcards: gene=ENSG00000175895 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000072506_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000072506_fitted_models.rds + jobid: 6264 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000072506_fitted_models.rds + wildcards: gene=ENSG00000072506 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198721_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198721_fitted_models.rds + jobid: 4596 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198721_fitted_models.rds + wildcards: gene=ENSG00000198721 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000101311_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101311_fitted_models.rds + jobid: 13139 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101311_fitted_models.rds + wildcards: gene=ENSG00000101311 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000186395_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000186395_fitted_models.rds + jobid: 12351 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000186395_fitted_models.rds + wildcards: gene=ENSG00000186395 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000042493_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000042493_fitted_models.rds + jobid: 1894 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000042493_fitted_models.rds + wildcards: gene=ENSG00000042493 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000122591_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000122591_fitted_models.rds + jobid: 5461 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000122591_fitted_models.rds + wildcards: gene=ENSG00000122591 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000180008_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000180008_fitted_models.rds + jobid: 10427 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000180008_fitted_models.rds + wildcards: gene=ENSG00000180008 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198826_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198826_fitted_models.rds + jobid: 10759 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198826_fitted_models.rds + wildcards: gene=ENSG00000198826 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000254999_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000254999_fitted_models.rds + jobid: 2534 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000254999_fitted_models.rds + wildcards: gene=ENSG00000254999 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000149090_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000149090_fitted_models.rds + jobid: 7978 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000149090_fitted_models.rds + wildcards: gene=ENSG00000149090 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000196961_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196961_fitted_models.rds + jobid: 14404 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196961_fitted_models.rds + wildcards: gene=ENSG00000196961 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000106665_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106665_fitted_models.rds + jobid: 5644 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106665_fitted_models.rds + wildcards: gene=ENSG00000106665 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000116044_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116044_fitted_models.rds + jobid: 2205 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116044_fitted_models.rds + wildcards: gene=ENSG00000116044 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000160318_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160318_fitted_models.rds + jobid: 14443 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160318_fitted_models.rds + wildcards: gene=ENSG00000160318 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000150527_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000150527_fitted_models.rds + jobid: 10369 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000150527_fitted_models.rds + wildcards: gene=ENSG00000150527 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000180902_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000180902_fitted_models.rds + jobid: 2495 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000180902_fitted_models.rds + wildcards: gene=ENSG00000180902 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000101391_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101391_fitted_models.rds + jobid: 13226 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101391_fitted_models.rds + wildcards: gene=ENSG00000101391 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000152104_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000152104_fitted_models.rds + jobid: 1348 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000152104_fitted_models.rds + wildcards: gene=ENSG00000152104 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000263146_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000263146_fitted_models.rds + jobid: 13055 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000263146_fitted_models.rds + wildcards: gene=ENSG00000263146 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000160888_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160888_fitted_models.rds + jobid: 13817 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160888_fitted_models.rds + wildcards: gene=ENSG00000160888 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000279483_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000279483_fitted_models.rds + jobid: 5959 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000279483_fitted_models.rds + wildcards: gene=ENSG00000279483 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000283809_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000283809_fitted_models.rds + jobid: 15211 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000283809_fitted_models.rds + wildcards: gene=ENSG00000283809 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000137075_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137075_fitted_models.rds + jobid: 7302 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137075_fitted_models.rds + wildcards: gene=ENSG00000137075 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000145247_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145247_fitted_models.rds + jobid: 3512 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145247_fitted_models.rds + wildcards: gene=ENSG00000145247 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000136051_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136051_fitted_models.rds + jobid: 9758 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136051_fitted_models.rds + wildcards: gene=ENSG00000136051 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000103266_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000103266_fitted_models.rds + jobid: 11239 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000103266_fitted_models.rds + wildcards: gene=ENSG00000103266 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000142046_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142046_fitted_models.rds + jobid: 14201 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142046_fitted_models.rds + wildcards: gene=ENSG00000142046 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000135506_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135506_fitted_models.rds + jobid: 9594 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135506_fitted_models.rds + wildcards: gene=ENSG00000135506 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000132507_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132507_fitted_models.rds + jobid: 12052 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132507_fitted_models.rds + wildcards: gene=ENSG00000132507 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000175287_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175287_fitted_models.rds + jobid: 7628 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175287_fitted_models.rds + wildcards: gene=ENSG00000175287 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000111670_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111670_fitted_models.rds + jobid: 9739 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111670_fitted_models.rds + wildcards: gene=ENSG00000111670 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000126261_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000126261_fitted_models.rds + jobid: 14027 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000126261_fitted_models.rds + wildcards: gene=ENSG00000126261 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000254682_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000254682_fitted_models.rds + jobid: 8301 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000254682_fitted_models.rds + wildcards: gene=ENSG00000254682 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198242_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198242_fitted_models.rds + jobid: 12221 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198242_fitted_models.rds + wildcards: gene=ENSG00000198242 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000134717_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134717_fitted_models.rds + jobid: 551 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134717_fitted_models.rds + wildcards: gene=ENSG00000134717 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000138587_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138587_fitted_models.rds + jobid: 10921 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138587_fitted_models.rds + wildcards: gene=ENSG00000138587 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000102226_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102226_fitted_models.rds + jobid: 6204 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102226_fitted_models.rds + wildcards: gene=ENSG00000102226 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198042_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198042_fitted_models.rds + jobid: 6760 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198042_fitted_models.rds + wildcards: gene=ENSG00000198042 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000172590_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172590_fitted_models.rds + jobid: 10268 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172590_fitted_models.rds + wildcards: gene=ENSG00000172590 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000218510_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000218510_fitted_models.rds + jobid: 225 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000218510_fitted_models.rds + wildcards: gene=ENSG00000218510 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000131116_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131116_fitted_models.rds + jobid: 14234 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131116_fitted_models.rds + wildcards: gene=ENSG00000131116 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000123562_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000123562_fitted_models.rds + jobid: 6412 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000123562_fitted_models.rds + wildcards: gene=ENSG00000123562 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000168374_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168374_fitted_models.rds + jobid: 2853 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168374_fitted_models.rds + wildcards: gene=ENSG00000168374 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000139372_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000139372_fitted_models.rds + jobid: 9748 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000139372_fitted_models.rds + wildcards: gene=ENSG00000139372 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000161203_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000161203_fitted_models.rds + jobid: 3249 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000161203_fitted_models.rds + wildcards: gene=ENSG00000161203 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100084_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100084_fitted_models.rds + jobid: 14659 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100084_fitted_models.rds + wildcards: gene=ENSG00000100084 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000116288_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116288_fitted_models.rds + jobid: 99 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116288_fitted_models.rds + wildcards: gene=ENSG00000116288 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198954_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198954_fitted_models.rds + jobid: 8821 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198954_fitted_models.rds + wildcards: gene=ENSG00000198954 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000256618_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000256618_fitted_models.rds + jobid: 12196 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000256618_fitted_models.rds + wildcards: gene=ENSG00000256618 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000149743_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000149743_fitted_models.rds + jobid: 8140 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000149743_fitted_models.rds + wildcards: gene=ENSG00000149743 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000275713_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000275713_fitted_models.rds + jobid: 4693 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000275713_fitted_models.rds + wildcards: gene=ENSG00000275713 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:47 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000143793_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143793_fitted_models.rds + jobid: 1410 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143793_fitted_models.rds + wildcards: gene=ENSG00000143793 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000179044_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179044_fitted_models.rds + jobid: 11721 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179044_fitted_models.rds + wildcards: gene=ENSG00000179044 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000153767_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153767_fitted_models.rds + jobid: 2995 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153767_fitted_models.rds + wildcards: gene=ENSG00000153767 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000179041_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179041_fitted_models.rds + jobid: 6853 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179041_fitted_models.rds + wildcards: gene=ENSG00000179041 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000108106_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108106_fitted_models.rds + jobid: 14527 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108106_fitted_models.rds + wildcards: gene=ENSG00000108106 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000099282_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099282_fitted_models.rds + jobid: 8825 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099282_fitted_models.rds + wildcards: gene=ENSG00000099282 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000157483_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000157483_fitted_models.rds + jobid: 10933 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000157483_fitted_models.rds + wildcards: gene=ENSG00000157483 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000140740_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140740_fitted_models.rds + jobid: 11468 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140740_fitted_models.rds + wildcards: gene=ENSG00000140740 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000185262_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185262_fitted_models.rds + jobid: 12717 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185262_fitted_models.rds + wildcards: gene=ENSG00000185262 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000137720_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137720_fitted_models.rds + jobid: 8466 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137720_fitted_models.rds + wildcards: gene=ENSG00000137720 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000171858_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171858_fitted_models.rds + jobid: 13434 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171858_fitted_models.rds + wildcards: gene=ENSG00000171858 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000197961_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197961_fitted_models.rds + jobid: 13699 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197961_fitted_models.rds + wildcards: gene=ENSG00000197961 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000116752_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116752_fitted_models.rds + jobid: 823 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116752_fitted_models.rds + wildcards: gene=ENSG00000116752 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000109861_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000109861_fitted_models.rds + jobid: 8396 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000109861_fitted_models.rds + wildcards: gene=ENSG00000109861 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000151743_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000151743_fitted_models.rds + jobid: 9380 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000151743_fitted_models.rds + wildcards: gene=ENSG00000151743 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000162065_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162065_fitted_models.rds + jobid: 11306 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162065_fitted_models.rds + wildcards: gene=ENSG00000162065 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000142235_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142235_fitted_models.rds + jobid: 14350 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142235_fitted_models.rds + wildcards: gene=ENSG00000142235 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000156587_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000156587_fitted_models.rds + jobid: 8045 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000156587_fitted_models.rds + wildcards: gene=ENSG00000156587 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000166123_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166123_fitted_models.rds + jobid: 11619 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166123_fitted_models.rds + wildcards: gene=ENSG00000166123 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000141934_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141934_fitted_models.rds + jobid: 13476 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141934_fitted_models.rds + wildcards: gene=ENSG00000141934 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000174444_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000174444_fitted_models.rds + jobid: 10990 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000174444_fitted_models.rds + wildcards: gene=ENSG00000174444 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000280018_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000280018_fitted_models.rds + jobid: 15013 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000280018_fitted_models.rds + wildcards: gene=ENSG00000280018 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000109083_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000109083_fitted_models.rds + jobid: 12202 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000109083_fitted_models.rds + wildcards: gene=ENSG00000109083 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000156171_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000156171_fitted_models.rds + jobid: 790 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000156171_fitted_models.rds + wildcards: gene=ENSG00000156171 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000178950_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000178950_fitted_models.rds + jobid: 3351 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000178950_fitted_models.rds + wildcards: gene=ENSG00000178950 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000138604_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138604_fitted_models.rds + jobid: 11007 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138604_fitted_models.rds + wildcards: gene=ENSG00000138604 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000105974_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105974_fitted_models.rds + jobid: 5875 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105974_fitted_models.rds + wildcards: gene=ENSG00000105974 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000160310_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160310_fitted_models.rds + jobid: 15170 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160310_fitted_models.rds + wildcards: gene=ENSG00000160310 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000085491_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000085491_fitted_models.rds + jobid: 753 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000085491_fitted_models.rds + wildcards: gene=ENSG00000085491 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000158604_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000158604_fitted_models.rds + jobid: 5560 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000158604_fitted_models.rds + wildcards: gene=ENSG00000158604 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000177830_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177830_fitted_models.rds + jobid: 7805 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177830_fitted_models.rds + wildcards: gene=ENSG00000177830 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000118680_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000118680_fitted_models.rds + jobid: 12847 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000118680_fitted_models.rds + wildcards: gene=ENSG00000118680 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000062038_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000062038_fitted_models.rds + jobid: 11765 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000062038_fitted_models.rds + wildcards: gene=ENSG00000062038 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000121769_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000121769_fitted_models.rds + jobid: 338 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000121769_fitted_models.rds + wildcards: gene=ENSG00000121769 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000232533_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000232533_fitted_models.rds + jobid: 6001 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000232533_fitted_models.rds + wildcards: gene=ENSG00000232533 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000029363_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000029363_fitted_models.rds + jobid: 5239 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000029363_fitted_models.rds + wildcards: gene=ENSG00000029363 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000103460_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000103460_fitted_models.rds + jobid: 11641 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000103460_fitted_models.rds + wildcards: gene=ENSG00000103460 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000258561_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000258561_fitted_models.rds + jobid: 10492 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000258561_fitted_models.rds + wildcards: gene=ENSG00000258561 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000229335_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000229335_fitted_models.rds + jobid: 6451 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000229335_fitted_models.rds + wildcards: gene=ENSG00000229335 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000151012_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000151012_fitted_models.rds + jobid: 3753 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000151012_fitted_models.rds + wildcards: gene=ENSG00000151012 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000070756_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000070756_fitted_models.rds + jobid: 6983 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000070756_fitted_models.rds + wildcards: gene=ENSG00000070756 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000172795_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172795_fitted_models.rds + jobid: 4216 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172795_fitted_models.rds + wildcards: gene=ENSG00000172795 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000128708_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128708_fitted_models.rds + jobid: 2183 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128708_fitted_models.rds + wildcards: gene=ENSG00000128708 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000125746_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125746_fitted_models.rds + jobid: 14290 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125746_fitted_models.rds + wildcards: gene=ENSG00000125746 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000087074_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000087074_fitted_models.rds + jobid: 14365 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000087074_fitted_models.rds + wildcards: gene=ENSG00000087074 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000136720_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136720_fitted_models.rds + jobid: 2069 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136720_fitted_models.rds + wildcards: gene=ENSG00000136720 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000128581_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128581_fitted_models.rds + jobid: 5813 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128581_fitted_models.rds + wildcards: gene=ENSG00000128581 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000179046_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179046_fitted_models.rds + jobid: 3894 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179046_fitted_models.rds + wildcards: gene=ENSG00000179046 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000136160_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136160_fitted_models.rds + jobid: 10162 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136160_fitted_models.rds + wildcards: gene=ENSG00000136160 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000092068_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000092068_fitted_models.rds + jobid: 10282 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000092068_fitted_models.rds + wildcards: gene=ENSG00000092068 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000115091_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115091_fitted_models.rds + jobid: 2029 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115091_fitted_models.rds + wildcards: gene=ENSG00000115091 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000176102_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176102_fitted_models.rds + jobid: 7964 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176102_fitted_models.rds + wildcards: gene=ENSG00000176102 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000116962_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116962_fitted_models.rds + jobid: 1462 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116962_fitted_models.rds + wildcards: gene=ENSG00000116962 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000128791_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128791_fitted_models.rds + jobid: 12868 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128791_fitted_models.rds + wildcards: gene=ENSG00000128791 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000120738_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000120738_fitted_models.rds + jobid: 4320 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000120738_fitted_models.rds + wildcards: gene=ENSG00000120738 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000154721_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000154721_fitted_models.rds + jobid: 15027 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000154721_fitted_models.rds + wildcards: gene=ENSG00000154721 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000170549_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170549_fitted_models.rds + jobid: 3920 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170549_fitted_models.rds + wildcards: gene=ENSG00000170549 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000104960_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104960_fitted_models.rds + jobid: 14408 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104960_fitted_models.rds + wildcards: gene=ENSG00000104960 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000006327_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000006327_fitted_models.rds + jobid: 11330 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000006327_fitted_models.rds + wildcards: gene=ENSG00000006327 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000103769_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000103769_fitted_models.rds + jobid: 10983 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000103769_fitted_models.rds + wildcards: gene=ENSG00000103769 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000171174_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171174_fitted_models.rds + jobid: 1648 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171174_fitted_models.rds + wildcards: gene=ENSG00000171174 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000134291_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134291_fitted_models.rds + jobid: 9426 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134291_fitted_models.rds + wildcards: gene=ENSG00000134291 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000034510_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000034510_fitted_models.rds + jobid: 1888 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000034510_fitted_models.rds + wildcards: gene=ENSG00000034510 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000228889_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000228889_fitted_models.rds + jobid: 10189 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000228889_fitted_models.rds + wildcards: gene=ENSG00000228889 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000028310_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000028310_fitted_models.rds + jobid: 3907 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000028310_fitted_models.rds + wildcards: gene=ENSG00000028310 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000122026_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000122026_fitted_models.rds + jobid: 10011 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000122026_fitted_models.rds + wildcards: gene=ENSG00000122026 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000139116_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000139116_fitted_models.rds + jobid: 9394 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000139116_fitted_models.rds + wildcards: gene=ENSG00000139116 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000125966_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125966_fitted_models.rds + jobid: 13251 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125966_fitted_models.rds + wildcards: gene=ENSG00000125966 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000118894_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000118894_fitted_models.rds + jobid: 11380 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000118894_fitted_models.rds + wildcards: gene=ENSG00000118894 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000149418_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000149418_fitted_models.rds + jobid: 8585 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000149418_fitted_models.rds + wildcards: gene=ENSG00000149418 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000117154_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117154_fitted_models.rds + jobid: 191 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117154_fitted_models.rds + wildcards: gene=ENSG00000117154 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000124702_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124702_fitted_models.rds + jobid: 4950 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124702_fitted_models.rds + wildcards: gene=ENSG00000124702 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000071082_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000071082_fitted_models.rds + jobid: 1973 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000071082_fitted_models.rds + wildcards: gene=ENSG00000071082 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000068305_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000068305_fitted_models.rds + jobid: 11195 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000068305_fitted_models.rds + wildcards: gene=ENSG00000068305 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000141682_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141682_fitted_models.rds + jobid: 13014 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141682_fitted_models.rds + wildcards: gene=ENSG00000141682 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000129991_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000129991_fitted_models.rds + jobid: 14514 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000129991_fitted_models.rds + wildcards: gene=ENSG00000129991 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000161551_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000161551_fitted_models.rds + jobid: 14446 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000161551_fitted_models.rds + wildcards: gene=ENSG00000161551 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000106538_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106538_fitted_models.rds + jobid: 6029 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106538_fitted_models.rds + wildcards: gene=ENSG00000106538 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000140443_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140443_fitted_models.rds + jobid: 11191 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140443_fitted_models.rds + wildcards: gene=ENSG00000140443 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100568_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100568_fitted_models.rds + jobid: 10501 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100568_fitted_models.rds + wildcards: gene=ENSG00000100568 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000205364_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000205364_fitted_models.rds + jobid: 11662 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000205364_fitted_models.rds + wildcards: gene=ENSG00000205364 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000233483_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000233483_fitted_models.rds + jobid: 12456 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000233483_fitted_models.rds + wildcards: gene=ENSG00000233483 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000177030_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177030_fitted_models.rds + jobid: 7788 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177030_fitted_models.rds + wildcards: gene=ENSG00000177030 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000189283_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000189283_fitted_models.rds + jobid: 2865 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000189283_fitted_models.rds + wildcards: gene=ENSG00000189283 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000131732_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131732_fitted_models.rds + jobid: 4140 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131732_fitted_models.rds + wildcards: gene=ENSG00000131732 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000172164_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172164_fitted_models.rds + jobid: 7034 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172164_fitted_models.rds + wildcards: gene=ENSG00000172164 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000148344_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000148344_fitted_models.rds + jobid: 7642 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000148344_fitted_models.rds + wildcards: gene=ENSG00000148344 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000172354_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172354_fitted_models.rds + jobid: 5788 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172354_fitted_models.rds + wildcards: gene=ENSG00000172354 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000182220_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182220_fitted_models.rds + jobid: 6176 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182220_fitted_models.rds + wildcards: gene=ENSG00000182220 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000175793_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175793_fitted_models.rds + jobid: 289 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175793_fitted_models.rds + wildcards: gene=ENSG00000175793 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000175634_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175634_fitted_models.rds + jobid: 8264 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175634_fitted_models.rds + wildcards: gene=ENSG00000175634 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167600_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167600_fitted_models.rds + jobid: 14196 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167600_fitted_models.rds + wildcards: gene=ENSG00000167600 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000263465_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000263465_fitted_models.rds + jobid: 8415 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000263465_fitted_models.rds + wildcards: gene=ENSG00000263465 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000113734_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113734_fitted_models.rds + jobid: 4486 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113734_fitted_models.rds + wildcards: gene=ENSG00000113734 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000161654_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000161654_fitted_models.rds + jobid: 12420 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000161654_fitted_models.rds + wildcards: gene=ENSG00000161654 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000101856_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101856_fitted_models.rds + jobid: 6458 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101856_fitted_models.rds + wildcards: gene=ENSG00000101856 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000166452_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166452_fitted_models.rds + jobid: 7867 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166452_fitted_models.rds + wildcards: gene=ENSG00000166452 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000136750_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136750_fitted_models.rds + jobid: 8697 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136750_fitted_models.rds + wildcards: gene=ENSG00000136750 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000101457_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101457_fitted_models.rds + jobid: 13332 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101457_fitted_models.rds + wildcards: gene=ENSG00000101457 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000187735_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000187735_fitted_models.rds + jobid: 6819 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000187735_fitted_models.rds + wildcards: gene=ENSG00000187735 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000182667_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182667_fitted_models.rds + jobid: 8591 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182667_fitted_models.rds + wildcards: gene=ENSG00000182667 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000232656_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000232656_fitted_models.rds + jobid: 8608 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000232656_fitted_models.rds + wildcards: gene=ENSG00000232656 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000153551_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153551_fitted_models.rds + jobid: 2615 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153551_fitted_models.rds + wildcards: gene=ENSG00000153551 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000178531_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000178531_fitted_models.rds + jobid: 13673 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000178531_fitted_models.rds + wildcards: gene=ENSG00000178531 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000138443_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138443_fitted_models.rds + jobid: 2311 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138443_fitted_models.rds + wildcards: gene=ENSG00000138443 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000142252_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142252_fitted_models.rds + jobid: 14274 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142252_fitted_models.rds + wildcards: gene=ENSG00000142252 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000096384_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000096384_fitted_models.rds + jobid: 4981 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000096384_fitted_models.rds + wildcards: gene=ENSG00000096384 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000186493_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000186493_fitted_models.rds + jobid: 3919 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000186493_fitted_models.rds + wildcards: gene=ENSG00000186493 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000183010_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183010_fitted_models.rds + jobid: 12802 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183010_fitted_models.rds + wildcards: gene=ENSG00000183010 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000107863_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107863_fitted_models.rds + jobid: 8692 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107863_fitted_models.rds + wildcards: gene=ENSG00000107863 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000179051_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179051_fitted_models.rds + jobid: 188 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179051_fitted_models.rds + wildcards: gene=ENSG00000179051 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000117148_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117148_fitted_models.rds + jobid: 190 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117148_fitted_models.rds + wildcards: gene=ENSG00000117148 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000070019_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000070019_fitted_models.rds + jobid: 9321 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000070019_fitted_models.rds + wildcards: gene=ENSG00000070019 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000166426_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166426_fitted_models.rds + jobid: 11091 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166426_fitted_models.rds + wildcards: gene=ENSG00000166426 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000125611_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125611_fitted_models.rds + jobid: 2019 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125611_fitted_models.rds + wildcards: gene=ENSG00000125611 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000137776_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137776_fitted_models.rds + jobid: 10931 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137776_fitted_models.rds + wildcards: gene=ENSG00000137776 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000196476_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196476_fitted_models.rds + jobid: 13070 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196476_fitted_models.rds + wildcards: gene=ENSG00000196476 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163634_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163634_fitted_models.rds + jobid: 2870 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163634_fitted_models.rds + wildcards: gene=ENSG00000163634 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000188732_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188732_fitted_models.rds + jobid: 5471 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188732_fitted_models.rds + wildcards: gene=ENSG00000188732 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000130203_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130203_fitted_models.rds + jobid: 14268 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130203_fitted_models.rds + wildcards: gene=ENSG00000130203 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000136213_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136213_fitted_models.rds + jobid: 5386 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136213_fitted_models.rds + wildcards: gene=ENSG00000136213 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000140995_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140995_fitted_models.rds + jobid: 11928 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140995_fitted_models.rds + wildcards: gene=ENSG00000140995 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164751_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164751_fitted_models.rds + jobid: 6896 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164751_fitted_models.rds + wildcards: gene=ENSG00000164751 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000128944_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128944_fitted_models.rds + jobid: 10797 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128944_fitted_models.rds + wildcards: gene=ENSG00000128944 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000132424_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132424_fitted_models.rds + jobid: 5113 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132424_fitted_models.rds + wildcards: gene=ENSG00000132424 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000129596_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000129596_fitted_models.rds + jobid: 4225 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000129596_fitted_models.rds + wildcards: gene=ENSG00000129596 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000071539_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000071539_fitted_models.rds + jobid: 3908 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000071539_fitted_models.rds + wildcards: gene=ENSG00000071539 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000197756_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197756_fitted_models.rds + jobid: 2358 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197756_fitted_models.rds + wildcards: gene=ENSG00000197756 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000145555_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145555_fitted_models.rds + jobid: 3952 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145555_fitted_models.rds + wildcards: gene=ENSG00000145555 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000106992_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106992_fitted_models.rds + jobid: 7593 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106992_fitted_models.rds + wildcards: gene=ENSG00000106992 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163945_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163945_fitted_models.rds + jobid: 3361 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163945_fitted_models.rds + wildcards: gene=ENSG00000163945 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000132323_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132323_fitted_models.rds + jobid: 2465 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132323_fitted_models.rds + wildcards: gene=ENSG00000132323 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000213214_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000213214_fitted_models.rds + jobid: 6006 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000213214_fitted_models.rds + wildcards: gene=ENSG00000213214 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000155367_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000155367_fitted_models.rds + jobid: 806 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000155367_fitted_models.rds + wildcards: gene=ENSG00000155367 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000153774_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153774_fitted_models.rds + jobid: 11826 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153774_fitted_models.rds + wildcards: gene=ENSG00000153774 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000124875_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124875_fitted_models.rds + jobid: 3563 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124875_fitted_models.rds + wildcards: gene=ENSG00000124875 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000141101_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141101_fitted_models.rds + jobid: 11781 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141101_fitted_models.rds + wildcards: gene=ENSG00000141101 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000180879_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000180879_fitted_models.rds + jobid: 6574 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000180879_fitted_models.rds + wildcards: gene=ENSG00000180879 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000270069_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000270069_fitted_models.rds + jobid: 6189 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000270069_fitted_models.rds + wildcards: gene=ENSG00000270069 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000179218_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179218_fitted_models.rds + jobid: 13808 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179218_fitted_models.rds + wildcards: gene=ENSG00000179218 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000174080_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000174080_fitted_models.rds + jobid: 8241 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000174080_fitted_models.rds + wildcards: gene=ENSG00000174080 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000178078_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000178078_fitted_models.rds + jobid: 13600 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000178078_fitted_models.rds + wildcards: gene=ENSG00000178078 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000141867_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141867_fitted_models.rds + jobid: 13853 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141867_fitted_models.rds + wildcards: gene=ENSG00000141867 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000139998_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000139998_fitted_models.rds + jobid: 10487 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000139998_fitted_models.rds + wildcards: gene=ENSG00000139998 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000234787_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000234787_fitted_models.rds + jobid: 10141 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000234787_fitted_models.rds + wildcards: gene=ENSG00000234787 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000066933_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000066933_fitted_models.rds + jobid: 11017 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000066933_fitted_models.rds + wildcards: gene=ENSG00000066933 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000282057_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000282057_fitted_models.rds + jobid: 677 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000282057_fitted_models.rds + wildcards: gene=ENSG00000282057 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000147123_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147123_fitted_models.rds + jobid: 6200 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147123_fitted_models.rds + wildcards: gene=ENSG00000147123 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000155760_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000155760_fitted_models.rds + jobid: 2299 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000155760_fitted_models.rds + wildcards: gene=ENSG00000155760 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000187607_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000187607_fitted_models.rds + jobid: 12130 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000187607_fitted_models.rds + wildcards: gene=ENSG00000187607 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167085_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167085_fitted_models.rds + jobid: 12503 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167085_fitted_models.rds + wildcards: gene=ENSG00000167085 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000131475_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131475_fitted_models.rds + jobid: 12394 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131475_fitted_models.rds + wildcards: gene=ENSG00000131475 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000123131_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000123131_fitted_models.rds + jobid: 6154 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000123131_fitted_models.rds + wildcards: gene=ENSG00000123131 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000058804_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000058804_fitted_models.rds + jobid: 569 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000058804_fitted_models.rds + wildcards: gene=ENSG00000058804 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000111906_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111906_fitted_models.rds + jobid: 5206 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111906_fitted_models.rds + wildcards: gene=ENSG00000111906 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000104320_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104320_fitted_models.rds + jobid: 6929 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104320_fitted_models.rds + wildcards: gene=ENSG00000104320 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000184924_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184924_fitted_models.rds + jobid: 1596 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184924_fitted_models.rds + wildcards: gene=ENSG00000184924 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000128915_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128915_fitted_models.rds + jobid: 10938 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128915_fitted_models.rds + wildcards: gene=ENSG00000128915 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000138085_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138085_fitted_models.rds + jobid: 1626 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138085_fitted_models.rds + wildcards: gene=ENSG00000138085 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000166963_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166963_fitted_models.rds + jobid: 10843 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166963_fitted_models.rds + wildcards: gene=ENSG00000166963 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000111846_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111846_fitted_models.rds + jobid: 4613 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111846_fitted_models.rds + wildcards: gene=ENSG00000111846 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000128228_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128228_fitted_models.rds + jobid: 14696 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128228_fitted_models.rds + wildcards: gene=ENSG00000128228 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000162998_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162998_fitted_models.rds + jobid: 2228 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162998_fitted_models.rds + wildcards: gene=ENSG00000162998 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000228594_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000228594_fitted_models.rds + jobid: 40 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000228594_fitted_models.rds + wildcards: gene=ENSG00000228594 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000055044_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000055044_fitted_models.rds + jobid: 2302 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000055044_fitted_models.rds + wildcards: gene=ENSG00000055044 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000106603_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106603_fitted_models.rds + jobid: 5544 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106603_fitted_models.rds + wildcards: gene=ENSG00000106603 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000106211_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106211_fitted_models.rds + jobid: 5662 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106211_fitted_models.rds + wildcards: gene=ENSG00000106211 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000196642_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196642_fitted_models.rds + jobid: 7722 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000196642_fitted_models.rds + wildcards: gene=ENSG00000196642 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000101447_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101447_fitted_models.rds + jobid: 13293 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101447_fitted_models.rds + wildcards: gene=ENSG00000101447 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000177697_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177697_fitted_models.rds + jobid: 7801 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177697_fitted_models.rds + wildcards: gene=ENSG00000177697 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000144057_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000144057_fitted_models.rds + jobid: 1991 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000144057_fitted_models.rds + wildcards: gene=ENSG00000144057 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000135441_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135441_fitted_models.rds + jobid: 9526 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135441_fitted_models.rds + wildcards: gene=ENSG00000135441 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000270885_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000270885_fitted_models.rds + jobid: 12285 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000270885_fitted_models.rds + wildcards: gene=ENSG00000270885 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000265241_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000265241_fitted_models.rds + jobid: 871 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000265241_fitted_models.rds + wildcards: gene=ENSG00000265241 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000114686_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114686_fitted_models.rds + jobid: 3070 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114686_fitted_models.rds + wildcards: gene=ENSG00000114686 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164746_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164746_fitted_models.rds + jobid: 5575 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164746_fitted_models.rds + wildcards: gene=ENSG00000164746 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164252_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164252_fitted_models.rds + jobid: 4112 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164252_fitted_models.rds + wildcards: gene=ENSG00000164252 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198938_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198938_fitted_models.rds + jobid: 15177 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198938_fitted_models.rds + wildcards: gene=ENSG00000198938 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000162384_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162384_fitted_models.rds + jobid: 565 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162384_fitted_models.rds + wildcards: gene=ENSG00000162384 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000111817_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111817_fitted_models.rds + jobid: 5177 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111817_fitted_models.rds + wildcards: gene=ENSG00000111817 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000121060_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000121060_fitted_models.rds + jobid: 12546 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000121060_fitted_models.rds + wildcards: gene=ENSG00000121060 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000076003_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000076003_fitted_models.rds + jobid: 2094 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000076003_fitted_models.rds + wildcards: gene=ENSG00000076003 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000065518_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000065518_fitted_models.rds + jobid: 2993 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000065518_fitted_models.rds + wildcards: gene=ENSG00000065518 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000067082_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000067082_fitted_models.rds + jobid: 8615 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000067082_fitted_models.rds + wildcards: gene=ENSG00000067082 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000169084_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169084_fitted_models.rds + jobid: 6086 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169084_fitted_models.rds + wildcards: gene=ENSG00000169084 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000144559_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000144559_fitted_models.rds + jobid: 2544 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000144559_fitted_models.rds + wildcards: gene=ENSG00000144559 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000124766_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124766_fitted_models.rds + jobid: 4658 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124766_fitted_models.rds + wildcards: gene=ENSG00000124766 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000197747_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197747_fitted_models.rds + jobid: 960 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197747_fitted_models.rds + wildcards: gene=ENSG00000197747 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000189403_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000189403_fitted_models.rds + jobid: 10026 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000189403_fitted_models.rds + wildcards: gene=ENSG00000189403 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:48 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000143033_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143033_fitted_models.rds + jobid: 712 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143033_fitted_models.rds + wildcards: gene=ENSG00000143033 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167434_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167434_fitted_models.rds + jobid: 12587 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167434_fitted_models.rds + wildcards: gene=ENSG00000167434 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100216_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100216_fitted_models.rds + jobid: 14866 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100216_fitted_models.rds + wildcards: gene=ENSG00000100216 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000151923_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000151923_fitted_models.rds + jobid: 9117 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000151923_fitted_models.rds + wildcards: gene=ENSG00000151923 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198221_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198221_fitted_models.rds + jobid: 5341 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198221_fitted_models.rds + wildcards: gene=ENSG00000198221 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000125977_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125977_fitted_models.rds + jobid: 13236 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125977_fitted_models.rds + wildcards: gene=ENSG00000125977 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000105402_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105402_fitted_models.rds + jobid: 14331 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105402_fitted_models.rds + wildcards: gene=ENSG00000105402 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000147383_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147383_fitted_models.rds + jobid: 6559 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147383_fitted_models.rds + wildcards: gene=ENSG00000147383 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000180228_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000180228_fitted_models.rds + jobid: 2213 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000180228_fitted_models.rds + wildcards: gene=ENSG00000180228 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000005001_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000005001_fitted_models.rds + jobid: 11319 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000005001_fitted_models.rds + wildcards: gene=ENSG00000005001 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000116285_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116285_fitted_models.rds + jobid: 100 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116285_fitted_models.rds + wildcards: gene=ENSG00000116285 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000142937_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142937_fitted_models.rds + jobid: 502 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142937_fitted_models.rds + wildcards: gene=ENSG00000142937 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000174748_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000174748_fitted_models.rds + jobid: 2594 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000174748_fitted_models.rds + wildcards: gene=ENSG00000174748 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000176407_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176407_fitted_models.rds + jobid: 1889 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176407_fitted_models.rds + wildcards: gene=ENSG00000176407 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000273338_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000273338_fitted_models.rds + jobid: 659 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000273338_fitted_models.rds + wildcards: gene=ENSG00000273338 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000184076_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184076_fitted_models.rds + jobid: 14772 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184076_fitted_models.rds + wildcards: gene=ENSG00000184076 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000169814_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169814_fitted_models.rds + jobid: 2575 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169814_fitted_models.rds + wildcards: gene=ENSG00000169814 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000137955_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137955_fitted_models.rds + jobid: 646 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137955_fitted_models.rds + wildcards: gene=ENSG00000137955 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000189143_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000189143_fitted_models.rds + jobid: 5638 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000189143_fitted_models.rds + wildcards: gene=ENSG00000189143 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000141504_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141504_fitted_models.rds + jobid: 12074 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141504_fitted_models.rds + wildcards: gene=ENSG00000141504 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000165030_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165030_fitted_models.rds + jobid: 7403 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165030_fitted_models.rds + wildcards: gene=ENSG00000165030 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000131473_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131473_fitted_models.rds + jobid: 12361 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131473_fitted_models.rds + wildcards: gene=ENSG00000131473 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100227_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100227_fitted_models.rds + jobid: 14931 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100227_fitted_models.rds + wildcards: gene=ENSG00000100227 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000278023_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000278023_fitted_models.rds + jobid: 12287 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000278023_fitted_models.rds + wildcards: gene=ENSG00000278023 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000143570_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143570_fitted_models.rds + jobid: 978 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143570_fitted_models.rds + wildcards: gene=ENSG00000143570 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198612_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198612_fitted_models.rds + jobid: 2456 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198612_fitted_models.rds + wildcards: gene=ENSG00000198612 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000114450_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114450_fitted_models.rds + jobid: 3224 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114450_fitted_models.rds + wildcards: gene=ENSG00000114450 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000115271_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115271_fitted_models.rds + jobid: 2149 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115271_fitted_models.rds + wildcards: gene=ENSG00000115271 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000243150_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000243150_fitted_models.rds + jobid: 3175 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000243150_fitted_models.rds + wildcards: gene=ENSG00000243150 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000117632_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117632_fitted_models.rds + jobid: 270 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117632_fitted_models.rds + wildcards: gene=ENSG00000117632 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164647_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164647_fitted_models.rds + jobid: 5694 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164647_fitted_models.rds + wildcards: gene=ENSG00000164647 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000161677_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000161677_fitted_models.rds + jobid: 14426 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000161677_fitted_models.rds + wildcards: gene=ENSG00000161677 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167733_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167733_fitted_models.rds + jobid: 13625 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167733_fitted_models.rds + wildcards: gene=ENSG00000167733 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000156966_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000156966_fitted_models.rds + jobid: 2428 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000156966_fitted_models.rds + wildcards: gene=ENSG00000156966 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000171724_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171724_fitted_models.rds + jobid: 11838 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171724_fitted_models.rds + wildcards: gene=ENSG00000171724 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000113356_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113356_fitted_models.rds + jobid: 4161 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113356_fitted_models.rds + wildcards: gene=ENSG00000113356 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000173113_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173113_fitted_models.rds + jobid: 8153 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173113_fitted_models.rds + wildcards: gene=ENSG00000173113 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000129925_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000129925_fitted_models.rds + jobid: 11225 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000129925_fitted_models.rds + wildcards: gene=ENSG00000129925 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000133639_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133639_fitted_models.rds + jobid: 9700 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133639_fitted_models.rds + wildcards: gene=ENSG00000133639 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000070759_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000070759_fitted_models.rds + jobid: 513 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000070759_fitted_models.rds + wildcards: gene=ENSG00000070759 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000108395_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108395_fitted_models.rds + jobid: 12571 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108395_fitted_models.rds + wildcards: gene=ENSG00000108395 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000085662_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000085662_fitted_models.rds + jobid: 5946 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000085662_fitted_models.rds + wildcards: gene=ENSG00000085662 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167555_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167555_fitted_models.rds + jobid: 14462 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167555_fitted_models.rds + wildcards: gene=ENSG00000167555 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000173848_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173848_fitted_models.rds + jobid: 8619 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173848_fitted_models.rds + wildcards: gene=ENSG00000173848 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000146278_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000146278_fitted_models.rds + jobid: 5090 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000146278_fitted_models.rds + wildcards: gene=ENSG00000146278 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000125944_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125944_fitted_models.rds + jobid: 235 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125944_fitted_models.rds + wildcards: gene=ENSG00000125944 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000125675_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125675_fitted_models.rds + jobid: 6479 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125675_fitted_models.rds + wildcards: gene=ENSG00000125675 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000099341_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099341_fitted_models.rds + jobid: 14127 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099341_fitted_models.rds + wildcards: gene=ENSG00000099341 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000176619_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176619_fitted_models.rds + jobid: 13556 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176619_fitted_models.rds + wildcards: gene=ENSG00000176619 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000212993_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000212993_fitted_models.rds + jobid: 7062 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000212993_fitted_models.rds + wildcards: gene=ENSG00000212993 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000135919_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135919_fitted_models.rds + jobid: 2408 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135919_fitted_models.rds + wildcards: gene=ENSG00000135919 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000161010_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000161010_fitted_models.rds + jobid: 4553 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000161010_fitted_models.rds + wildcards: gene=ENSG00000161010 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000112249_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112249_fitted_models.rds + jobid: 5118 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112249_fitted_models.rds + wildcards: gene=ENSG00000112249 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198301_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198301_fitted_models.rds + jobid: 3579 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198301_fitted_models.rds + wildcards: gene=ENSG00000198301 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000114353_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114353_fitted_models.rds + jobid: 2776 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114353_fitted_models.rds + wildcards: gene=ENSG00000114353 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000144824_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000144824_fitted_models.rds + jobid: 2955 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000144824_fitted_models.rds + wildcards: gene=ENSG00000144824 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000169288_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169288_fitted_models.rds + jobid: 3588 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169288_fitted_models.rds + wildcards: gene=ENSG00000169288 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000171928_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171928_fitted_models.rds + jobid: 12174 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171928_fitted_models.rds + wildcards: gene=ENSG00000171928 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000234745_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000234745_fitted_models.rds + jobid: 4783 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000234745_fitted_models.rds + wildcards: gene=ENSG00000234745 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000165264_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165264_fitted_models.rds + jobid: 7242 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165264_fitted_models.rds + wildcards: gene=ENSG00000165264 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000213064_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000213064_fitted_models.rds + jobid: 1137 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000213064_fitted_models.rds + wildcards: gene=ENSG00000213064 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000175193_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175193_fitted_models.rds + jobid: 3244 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175193_fitted_models.rds + wildcards: gene=ENSG00000175193 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000169976_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169976_fitted_models.rds + jobid: 5270 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169976_fitted_models.rds + wildcards: gene=ENSG00000169976 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000154639_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000154639_fitted_models.rds + jobid: 15021 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000154639_fitted_models.rds + wildcards: gene=ENSG00000154639 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000240230_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000240230_fitted_models.rds + jobid: 5369 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000240230_fitted_models.rds + wildcards: gene=ENSG00000240230 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000083307_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000083307_fitted_models.rds + jobid: 6987 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000083307_fitted_models.rds + wildcards: gene=ENSG00000083307 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000218336_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000218336_fitted_models.rds + jobid: 3862 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000218336_fitted_models.rds + wildcards: gene=ENSG00000218336 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000136732_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136732_fitted_models.rds + jobid: 2053 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136732_fitted_models.rds + wildcards: gene=ENSG00000136732 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000110651_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000110651_fitted_models.rds + jobid: 7816 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000110651_fitted_models.rds + wildcards: gene=ENSG00000110651 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000172889_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172889_fitted_models.rds + jobid: 7716 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172889_fitted_models.rds + wildcards: gene=ENSG00000172889 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000214063_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000214063_fitted_models.rds + jobid: 7803 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000214063_fitted_models.rds + wildcards: gene=ENSG00000214063 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000111716_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111716_fitted_models.rds + jobid: 9340 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111716_fitted_models.rds + wildcards: gene=ENSG00000111716 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163319_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163319_fitted_models.rds + jobid: 3613 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163319_fitted_models.rds + wildcards: gene=ENSG00000163319 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000006451_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000006451_fitted_models.rds + jobid: 5532 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000006451_fitted_models.rds + wildcards: gene=ENSG00000006451 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000133318_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133318_fitted_models.rds + jobid: 8129 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133318_fitted_models.rds + wildcards: gene=ENSG00000133318 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000244486_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000244486_fitted_models.rds + jobid: 14680 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000244486_fitted_models.rds + wildcards: gene=ENSG00000244486 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164631_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164631_fitted_models.rds + jobid: 5423 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164631_fitted_models.rds + wildcards: gene=ENSG00000164631 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000249152_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000249152_fitted_models.rds + jobid: 3642 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000249152_fitted_models.rds + wildcards: gene=ENSG00000249152 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000176410_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176410_fitted_models.rds + jobid: 5633 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176410_fitted_models.rds + wildcards: gene=ENSG00000176410 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000169612_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169612_fitted_models.rds + jobid: 11127 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169612_fitted_models.rds + wildcards: gene=ENSG00000169612 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000120742_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000120742_fitted_models.rds + jobid: 3146 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000120742_fitted_models.rds + wildcards: gene=ENSG00000120742 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000106635_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106635_fitted_models.rds + jobid: 5629 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106635_fitted_models.rds + wildcards: gene=ENSG00000106635 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000179409_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179409_fitted_models.rds + jobid: 11939 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179409_fitted_models.rds + wildcards: gene=ENSG00000179409 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000129128_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000129128_fitted_models.rds + jobid: 3855 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000129128_fitted_models.rds + wildcards: gene=ENSG00000129128 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000149948_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000149948_fitted_models.rds + jobid: 9630 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000149948_fitted_models.rds + wildcards: gene=ENSG00000149948 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000131023_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131023_fitted_models.rds + jobid: 5286 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131023_fitted_models.rds + wildcards: gene=ENSG00000131023 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000212694_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000212694_fitted_models.rds + jobid: 9894 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000212694_fitted_models.rds + wildcards: gene=ENSG00000212694 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000127884_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000127884_fitted_models.rds + jobid: 9180 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000127884_fitted_models.rds + wildcards: gene=ENSG00000127884 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163584_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163584_fitted_models.rds + jobid: 3209 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163584_fitted_models.rds + wildcards: gene=ENSG00000163584 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000109610_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000109610_fitted_models.rds + jobid: 3451 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000109610_fitted_models.rds + wildcards: gene=ENSG00000109610 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164934_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164934_fitted_models.rds + jobid: 7000 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164934_fitted_models.rds + wildcards: gene=ENSG00000164934 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000134333_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134333_fitted_models.rds + jobid: 7921 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134333_fitted_models.rds + wildcards: gene=ENSG00000134333 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000075239_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000075239_fitted_models.rds + jobid: 8449 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000075239_fitted_models.rds + wildcards: gene=ENSG00000075239 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100814_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100814_fitted_models.rds + jobid: 10241 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100814_fitted_models.rds + wildcards: gene=ENSG00000100814 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000154001_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000154001_fitted_models.rds + jobid: 10473 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000154001_fitted_models.rds + wildcards: gene=ENSG00000154001 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000166068_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166068_fitted_models.rds + jobid: 10780 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166068_fitted_models.rds + wildcards: gene=ENSG00000166068 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000148634_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000148634_fitted_models.rds + jobid: 8809 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000148634_fitted_models.rds + wildcards: gene=ENSG00000148634 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000177200_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177200_fitted_models.rds + jobid: 11643 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177200_fitted_models.rds + wildcards: gene=ENSG00000177200 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000106153_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106153_fitted_models.rds + jobid: 5593 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106153_fitted_models.rds + wildcards: gene=ENSG00000106153 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000170832_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170832_fitted_models.rds + jobid: 12588 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170832_fitted_models.rds + wildcards: gene=ENSG00000170832 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164032_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164032_fitted_models.rds + jobid: 3659 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164032_fitted_models.rds + wildcards: gene=ENSG00000164032 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000141385_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141385_fitted_models.rds + jobid: 12881 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141385_fitted_models.rds + wildcards: gene=ENSG00000141385 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000185896_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185896_fitted_models.rds + jobid: 10229 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185896_fitted_models.rds + wildcards: gene=ENSG00000185896 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000052344_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000052344_fitted_models.rds + jobid: 11597 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000052344_fitted_models.rds + wildcards: gene=ENSG00000052344 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000160213_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160213_fitted_models.rds + jobid: 15131 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160213_fitted_models.rds + wildcards: gene=ENSG00000160213 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000184261_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184261_fitted_models.rds + jobid: 1735 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184261_fitted_models.rds + wildcards: gene=ENSG00000184261 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000262001_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000262001_fitted_models.rds + jobid: 12852 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000262001_fitted_models.rds + wildcards: gene=ENSG00000262001 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000041988_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000041988_fitted_models.rds + jobid: 93 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000041988_fitted_models.rds + wildcards: gene=ENSG00000041988 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000188486_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188486_fitted_models.rds + jobid: 8525 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188486_fitted_models.rds + wildcards: gene=ENSG00000188486 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000105793_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105793_fitted_models.rds + jobid: 5697 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105793_fitted_models.rds + wildcards: gene=ENSG00000105793 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000142871_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142871_fitted_models.rds + jobid: 678 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142871_fitted_models.rds + wildcards: gene=ENSG00000142871 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000130201_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130201_fitted_models.rds + jobid: 14279 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130201_fitted_models.rds + wildcards: gene=ENSG00000130201 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000124588_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124588_fitted_models.rds + jobid: 4582 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124588_fitted_models.rds + wildcards: gene=ENSG00000124588 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000123119_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000123119_fitted_models.rds + jobid: 6934 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000123119_fitted_models.rds + wildcards: gene=ENSG00000123119 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100575_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100575_fitted_models.rds + jobid: 10448 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100575_fitted_models.rds + wildcards: gene=ENSG00000100575 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000178035_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000178035_fitted_models.rds + jobid: 2746 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000178035_fitted_models.rds + wildcards: gene=ENSG00000178035 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167874_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167874_fitted_models.rds + jobid: 12080 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167874_fitted_models.rds + wildcards: gene=ENSG00000167874 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000108587_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108587_fitted_models.rds + jobid: 12245 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000108587_fitted_models.rds + wildcards: gene=ENSG00000108587 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000175309_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175309_fitted_models.rds + jobid: 4535 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175309_fitted_models.rds + wildcards: gene=ENSG00000175309 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000124839_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124839_fitted_models.rds + jobid: 2459 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124839_fitted_models.rds + wildcards: gene=ENSG00000124839 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000181222_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000181222_fitted_models.rds + jobid: 12064 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000181222_fitted_models.rds + wildcards: gene=ENSG00000181222 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000099797_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099797_fitted_models.rds + jobid: 13844 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099797_fitted_models.rds + wildcards: gene=ENSG00000099797 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000235823_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000235823_fitted_models.rds + jobid: 9011 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000235823_fitted_models.rds + wildcards: gene=ENSG00000235823 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000183011_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183011_fitted_models.rds + jobid: 12081 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183011_fitted_models.rds + wildcards: gene=ENSG00000183011 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000065911_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000065911_fitted_models.rds + jobid: 1858 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000065911_fitted_models.rds + wildcards: gene=ENSG00000065911 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000170412_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170412_fitted_models.rds + jobid: 12669 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170412_fitted_models.rds + wildcards: gene=ENSG00000170412 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000177889_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177889_fitted_models.rds + jobid: 9704 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177889_fitted_models.rds + wildcards: gene=ENSG00000177889 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000117748_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117748_fitted_models.rds + jobid: 310 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117748_fitted_models.rds + wildcards: gene=ENSG00000117748 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000147601_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147601_fitted_models.rds + jobid: 6880 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147601_fitted_models.rds + wildcards: gene=ENSG00000147601 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000055332_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000055332_fitted_models.rds + jobid: 1678 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000055332_fitted_models.rds + wildcards: gene=ENSG00000055332 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000163430_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163430_fitted_models.rds + jobid: 2992 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000163430_fitted_models.rds + wildcards: gene=ENSG00000163430 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000023287_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000023287_fitted_models.rds + jobid: 6816 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000023287_fitted_models.rds + wildcards: gene=ENSG00000023287 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000142864_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142864_fitted_models.rds + jobid: 625 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142864_fitted_models.rds + wildcards: gene=ENSG00000142864 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000138382_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138382_fitted_models.rds + jobid: 2171 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138382_fitted_models.rds + wildcards: gene=ENSG00000138382 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000150787_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000150787_fitted_models.rds + jobid: 8477 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000150787_fitted_models.rds + wildcards: gene=ENSG00000150787 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000140391_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140391_fitted_models.rds + jobid: 11081 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140391_fitted_models.rds + wildcards: gene=ENSG00000140391 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000152684_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000152684_fitted_models.rds + jobid: 4018 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000152684_fitted_models.rds + wildcards: gene=ENSG00000152684 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000236714_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000236714_fitted_models.rds + jobid: 4383 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000236714_fitted_models.rds + wildcards: gene=ENSG00000236714 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198680_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198680_fitted_models.rds + jobid: 7230 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198680_fitted_models.rds + wildcards: gene=ENSG00000198680 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000085231_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000085231_fitted_models.rds + jobid: 4073 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000085231_fitted_models.rds + wildcards: gene=ENSG00000085231 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000146232_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000146232_fitted_models.rds + jobid: 4983 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000146232_fitted_models.rds + wildcards: gene=ENSG00000146232 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000214265_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000214265_fitted_models.rds + jobid: 10738 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000214265_fitted_models.rds + wildcards: gene=ENSG00000214265 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000213585_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000213585_fitted_models.rds + jobid: 4284 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000213585_fitted_models.rds + wildcards: gene=ENSG00000213585 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000139278_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000139278_fitted_models.rds + jobid: 9662 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000139278_fitted_models.rds + wildcards: gene=ENSG00000139278 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000005801_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000005801_fitted_models.rds + jobid: 7827 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000005801_fitted_models.rds + wildcards: gene=ENSG00000005801 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000184557_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184557_fitted_models.rds + jobid: 12743 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184557_fitted_models.rds + wildcards: gene=ENSG00000184557 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000110721_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000110721_fitted_models.rds + jobid: 8277 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000110721_fitted_models.rds + wildcards: gene=ENSG00000110721 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000112695_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112695_fitted_models.rds + jobid: 5048 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112695_fitted_models.rds + wildcards: gene=ENSG00000112695 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000124222_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124222_fitted_models.rds + jobid: 13410 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124222_fitted_models.rds + wildcards: gene=ENSG00000124222 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000101665_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101665_fitted_models.rds + jobid: 12970 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101665_fitted_models.rds + wildcards: gene=ENSG00000101665 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000150627_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000150627_fitted_models.rds + jobid: 3854 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000150627_fitted_models.rds + wildcards: gene=ENSG00000150627 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000115762_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115762_fitted_models.rds + jobid: 2080 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115762_fitted_models.rds + wildcards: gene=ENSG00000115762 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000145723_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145723_fitted_models.rds + jobid: 4190 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145723_fitted_models.rds + wildcards: gene=ENSG00000145723 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000175197_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175197_fitted_models.rds + jobid: 9587 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175197_fitted_models.rds + wildcards: gene=ENSG00000175197 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000006042_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000006042_fitted_models.rds + jobid: 12269 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000006042_fitted_models.rds + wildcards: gene=ENSG00000006042 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000077063_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000077063_fitted_models.rds + jobid: 5880 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000077063_fitted_models.rds + wildcards: gene=ENSG00000077063 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000147604_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147604_fitted_models.rds + jobid: 6883 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147604_fitted_models.rds + wildcards: gene=ENSG00000147604 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000151366_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000151366_fitted_models.rds + jobid: 8365 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000151366_fitted_models.rds + wildcards: gene=ENSG00000151366 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000188229_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188229_fitted_models.rds + jobid: 7748 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188229_fitted_models.rds + wildcards: gene=ENSG00000188229 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000171314_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171314_fitted_models.rds + jobid: 8982 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171314_fitted_models.rds + wildcards: gene=ENSG00000171314 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000166352_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166352_fitted_models.rds + jobid: 7985 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166352_fitted_models.rds + wildcards: gene=ENSG00000166352 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000177469_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177469_fitted_models.rds + jobid: 12376 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177469_fitted_models.rds + wildcards: gene=ENSG00000177469 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000186007_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000186007_fitted_models.rds + jobid: 1293 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000186007_fitted_models.rds + wildcards: gene=ENSG00000186007 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000243709_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000243709_fitted_models.rds + jobid: 1391 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000243709_fitted_models.rds + wildcards: gene=ENSG00000243709 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000153395_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153395_fitted_models.rds + jobid: 3913 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153395_fitted_models.rds + wildcards: gene=ENSG00000153395 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000147324_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147324_fitted_models.rds + jobid: 6635 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000147324_fitted_models.rds + wildcards: gene=ENSG00000147324 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000116353_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116353_fitted_models.rds + jobid: 331 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116353_fitted_models.rds + wildcards: gene=ENSG00000116353 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000134056_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134056_fitted_models.rds + jobid: 4070 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134056_fitted_models.rds + wildcards: gene=ENSG00000134056 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000001561_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000001561_fitted_models.rds + jobid: 4989 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000001561_fitted_models.rds + wildcards: gene=ENSG00000001561 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000182600_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182600_fitted_models.rds + jobid: 2442 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182600_fitted_models.rds + wildcards: gene=ENSG00000182600 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000124092_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124092_fitted_models.rds + jobid: 13404 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124092_fitted_models.rds + wildcards: gene=ENSG00000124092 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000115419_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115419_fitted_models.rds + jobid: 2256 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115419_fitted_models.rds + wildcards: gene=ENSG00000115419 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000214114_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000214114_fitted_models.rds + jobid: 428 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000214114_fitted_models.rds + wildcards: gene=ENSG00000214114 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000113161_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113161_fitted_models.rds + jobid: 4105 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000113161_fitted_models.rds + wildcards: gene=ENSG00000113161 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100412_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100412_fitted_models.rds + jobid: 14908 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100412_fitted_models.rds + wildcards: gene=ENSG00000100412 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000204217_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204217_fitted_models.rds + jobid: 2304 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204217_fitted_models.rds + wildcards: gene=ENSG00000204217 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000230989_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000230989_fitted_models.rds + jobid: 11856 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000230989_fitted_models.rds + wildcards: gene=ENSG00000230989 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000106078_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106078_fitted_models.rds + jobid: 5581 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000106078_fitted_models.rds + wildcards: gene=ENSG00000106078 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000114062_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114062_fitted_models.rds + jobid: 10741 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114062_fitted_models.rds + wildcards: gene=ENSG00000114062 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164713_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164713_fitted_models.rds + jobid: 5733 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164713_fitted_models.rds + wildcards: gene=ENSG00000164713 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000184164_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184164_fitted_models.rds + jobid: 14978 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184164_fitted_models.rds + wildcards: gene=ENSG00000184164 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000102890_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102890_fitted_models.rds + jobid: 11723 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102890_fitted_models.rds + wildcards: gene=ENSG00000102890 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000125798_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125798_fitted_models.rds + jobid: 13188 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125798_fitted_models.rds + wildcards: gene=ENSG00000125798 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000115648_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115648_fitted_models.rds + jobid: 2458 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115648_fitted_models.rds + wildcards: gene=ENSG00000115648 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000087086_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000087086_fitted_models.rds + jobid: 14369 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000087086_fitted_models.rds + wildcards: gene=ENSG00000087086 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000138685_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138685_fitted_models.rds + jobid: 3731 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138685_fitted_models.rds + wildcards: gene=ENSG00000138685 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000133961_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133961_fitted_models.rds + jobid: 10534 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000133961_fitted_models.rds + wildcards: gene=ENSG00000133961 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000117616_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117616_fitted_models.rds + jobid: 258 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117616_fitted_models.rds + wildcards: gene=ENSG00000117616 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000037897_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000037897_fitted_models.rds + jobid: 9600 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000037897_fitted_models.rds + wildcards: gene=ENSG00000037897 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000170522_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170522_fitted_models.rds + jobid: 3698 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170522_fitted_models.rds + wildcards: gene=ENSG00000170522 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000161057_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000161057_fitted_models.rds + jobid: 5832 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000161057_fitted_models.rds + wildcards: gene=ENSG00000161057 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000070214_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000070214_fitted_models.rds + jobid: 7476 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000070214_fitted_models.rds + wildcards: gene=ENSG00000070214 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:49 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100941_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100941_fitted_models.rds + jobid: 10368 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100941_fitted_models.rds + wildcards: gene=ENSG00000100941 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000112159_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112159_fitted_models.rds + jobid: 5097 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000112159_fitted_models.rds + wildcards: gene=ENSG00000112159 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000116455_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116455_fitted_models.rds + jobid: 794 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116455_fitted_models.rds + wildcards: gene=ENSG00000116455 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000128872_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128872_fitted_models.rds + jobid: 10895 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128872_fitted_models.rds + wildcards: gene=ENSG00000128872 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000169684_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169684_fitted_models.rds + jobid: 11095 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169684_fitted_models.rds + wildcards: gene=ENSG00000169684 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000099330_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099330_fitted_models.rds + jobid: 13877 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099330_fitted_models.rds + wildcards: gene=ENSG00000099330 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000096433_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000096433_fitted_models.rds + jobid: 4861 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000096433_fitted_models.rds + wildcards: gene=ENSG00000096433 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000054148_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000054148_fitted_models.rds + jobid: 7724 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000054148_fitted_models.rds + wildcards: gene=ENSG00000054148 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000134375_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134375_fitted_models.rds + jobid: 1254 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134375_fitted_models.rds + wildcards: gene=ENSG00000134375 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000145794_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145794_fitted_models.rds + jobid: 4253 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000145794_fitted_models.rds + wildcards: gene=ENSG00000145794 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000205220_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000205220_fitted_models.rds + jobid: 11751 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000205220_fitted_models.rds + wildcards: gene=ENSG00000205220 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000111639_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111639_fitted_models.rds + jobid: 9232 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111639_fitted_models.rds + wildcards: gene=ENSG00000111639 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000135069_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135069_fitted_models.rds + jobid: 7370 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135069_fitted_models.rds + wildcards: gene=ENSG00000135069 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000282851_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000282851_fitted_models.rds + jobid: 13888 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000282851_fitted_models.rds + wildcards: gene=ENSG00000282851 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000263001_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000263001_fitted_models.rds + jobid: 5646 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000263001_fitted_models.rds + wildcards: gene=ENSG00000263001 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100060_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100060_fitted_models.rds + jobid: 14836 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100060_fitted_models.rds + wildcards: gene=ENSG00000100060 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000213889_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000213889_fitted_models.rds + jobid: 14287 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000213889_fitted_models.rds + wildcards: gene=ENSG00000213889 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000179431_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179431_fitted_models.rds + jobid: 7979 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179431_fitted_models.rds + wildcards: gene=ENSG00000179431 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000197081_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197081_fitted_models.rds + jobid: 5326 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197081_fitted_models.rds + wildcards: gene=ENSG00000197081 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000114854_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114854_fitted_models.rds + jobid: 2820 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000114854_fitted_models.rds + wildcards: gene=ENSG00000114854 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164323_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164323_fitted_models.rds + jobid: 3878 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164323_fitted_models.rds + wildcards: gene=ENSG00000164323 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000107537_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107537_fitted_models.rds + jobid: 8651 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107537_fitted_models.rds + wildcards: gene=ENSG00000107537 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000101057_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101057_fitted_models.rds + jobid: 13307 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101057_fitted_models.rds + wildcards: gene=ENSG00000101057 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000261949_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000261949_fitted_models.rds + jobid: 14384 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000261949_fitted_models.rds + wildcards: gene=ENSG00000261949 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000136159_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136159_fitted_models.rds + jobid: 10095 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136159_fitted_models.rds + wildcards: gene=ENSG00000136159 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000204347_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204347_fitted_models.rds + jobid: 12668 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000204347_fitted_models.rds + wildcards: gene=ENSG00000204347 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000188051_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188051_fitted_models.rds + jobid: 13890 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188051_fitted_models.rds + wildcards: gene=ENSG00000188051 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000183617_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183617_fitted_models.rds + jobid: 13583 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000183617_fitted_models.rds + wildcards: gene=ENSG00000183617 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000263508_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000263508_fitted_models.rds + jobid: 12114 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000263508_fitted_models.rds + wildcards: gene=ENSG00000263508 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000177156_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177156_fitted_models.rds + jobid: 7791 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000177156_fitted_models.rds + wildcards: gene=ENSG00000177156 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000101558_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101558_fitted_models.rds + jobid: 12872 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101558_fitted_models.rds + wildcards: gene=ENSG00000101558 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000066468_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000066468_fitted_models.rds + jobid: 9123 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000066468_fitted_models.rds + wildcards: gene=ENSG00000066468 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000044574_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000044574_fitted_models.rds + jobid: 7570 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000044574_fitted_models.rds + wildcards: gene=ENSG00000044574 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000130702_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130702_fitted_models.rds + jobid: 13432 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130702_fitted_models.rds + wildcards: gene=ENSG00000130702 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000123989_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000123989_fitted_models.rds + jobid: 2394 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000123989_fitted_models.rds + wildcards: gene=ENSG00000123989 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000172794_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172794_fitted_models.rds + jobid: 12670 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172794_fitted_models.rds + wildcards: gene=ENSG00000172794 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000101104_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101104_fitted_models.rds + jobid: 13321 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101104_fitted_models.rds + wildcards: gene=ENSG00000101104 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000140691_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140691_fitted_models.rds + jobid: 11607 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140691_fitted_models.rds + wildcards: gene=ENSG00000140691 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198176_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198176_fitted_models.rds + jobid: 10233 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198176_fitted_models.rds + wildcards: gene=ENSG00000198176 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000169016_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169016_fitted_models.rds + jobid: 1559 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169016_fitted_models.rds + wildcards: gene=ENSG00000169016 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000243317_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000243317_fitted_models.rds + jobid: 5954 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000243317_fitted_models.rds + wildcards: gene=ENSG00000243317 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198755_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198755_fitted_models.rds + jobid: 4881 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198755_fitted_models.rds + wildcards: gene=ENSG00000198755 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000173473_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173473_fitted_models.rds + jobid: 2716 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173473_fitted_models.rds + wildcards: gene=ENSG00000173473 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000099194_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099194_fitted_models.rds + jobid: 9010 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099194_fitted_models.rds + wildcards: gene=ENSG00000099194 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000137409_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137409_fitted_models.rds + jobid: 4901 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137409_fitted_models.rds + wildcards: gene=ENSG00000137409 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167799_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167799_fitted_models.rds + jobid: 8272 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167799_fitted_models.rds + wildcards: gene=ENSG00000167799 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000152818_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000152818_fitted_models.rds + jobid: 5271 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000152818_fitted_models.rds + wildcards: gene=ENSG00000152818 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000149091_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000149091_fitted_models.rds + jobid: 8008 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000149091_fitted_models.rds + wildcards: gene=ENSG00000149091 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000171793_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171793_fitted_models.rds + jobid: 456 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171793_fitted_models.rds + wildcards: gene=ENSG00000171793 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000105472_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105472_fitted_models.rds + jobid: 14430 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105472_fitted_models.rds + wildcards: gene=ENSG00000105472 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000128626_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128626_fitted_models.rds + jobid: 14147 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128626_fitted_models.rds + wildcards: gene=ENSG00000128626 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000124767_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124767_fitted_models.rds + jobid: 4911 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124767_fitted_models.rds + wildcards: gene=ENSG00000124767 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000086598_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000086598_fitted_models.rds + jobid: 9927 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000086598_fitted_models.rds + wildcards: gene=ENSG00000086598 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000179988_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179988_fitted_models.rds + jobid: 9132 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179988_fitted_models.rds + wildcards: gene=ENSG00000179988 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000230590_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000230590_fitted_models.rds + jobid: 6340 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000230590_fitted_models.rds + wildcards: gene=ENSG00000230590 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000102024_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102024_fitted_models.rds + jobid: 6450 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000102024_fitted_models.rds + wildcards: gene=ENSG00000102024 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000104722_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104722_fitted_models.rds + jobid: 6713 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104722_fitted_models.rds + wildcards: gene=ENSG00000104722 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000103253_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000103253_fitted_models.rds + jobid: 11246 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000103253_fitted_models.rds + wildcards: gene=ENSG00000103253 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000135821_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135821_fitted_models.rds + jobid: 1193 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135821_fitted_models.rds + wildcards: gene=ENSG00000135821 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000130414_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130414_fitted_models.rds + jobid: 2473 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130414_fitted_models.rds + wildcards: gene=ENSG00000130414 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000233276_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000233276_fitted_models.rds + jobid: 2755 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000233276_fitted_models.rds + wildcards: gene=ENSG00000233276 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000141522_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141522_fitted_models.rds + jobid: 12793 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141522_fitted_models.rds + wildcards: gene=ENSG00000141522 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000165898_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165898_fitted_models.rds + jobid: 10553 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000165898_fitted_models.rds + wildcards: gene=ENSG00000165898 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000101158_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101158_fitted_models.rds + jobid: 13415 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000101158_fitted_models.rds + wildcards: gene=ENSG00000101158 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000119689_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119689_fitted_models.rds + jobid: 10557 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000119689_fitted_models.rds + wildcards: gene=ENSG00000119689 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000182534_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182534_fitted_models.rds + jobid: 12728 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182534_fitted_models.rds + wildcards: gene=ENSG00000182534 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000152804_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000152804_fitted_models.rds + jobid: 8950 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000152804_fitted_models.rds + wildcards: gene=ENSG00000152804 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000121851_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000121851_fitted_models.rds + jobid: 873 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000121851_fitted_models.rds + wildcards: gene=ENSG00000121851 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000168672_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168672_fitted_models.rds + jobid: 7058 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000168672_fitted_models.rds + wildcards: gene=ENSG00000168672 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000153107_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153107_fitted_models.rds + jobid: 2011 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000153107_fitted_models.rds + wildcards: gene=ENSG00000153107 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198763_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198763_fitted_models.rds + jobid: 15172 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198763_fitted_models.rds + wildcards: gene=ENSG00000198763 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100181_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100181_fitted_models.rds + jobid: 14635 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100181_fitted_models.rds + wildcards: gene=ENSG00000100181 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000277196_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000277196_fitted_models.rds + jobid: 15187 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000277196_fitted_models.rds + wildcards: gene=ENSG00000277196 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164134_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164134_fitted_models.rds + jobid: 3758 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164134_fitted_models.rds + wildcards: gene=ENSG00000164134 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000125971_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125971_fitted_models.rds + jobid: 13239 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125971_fitted_models.rds + wildcards: gene=ENSG00000125971 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000136930_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136930_fitted_models.rds + jobid: 7560 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000136930_fitted_models.rds + wildcards: gene=ENSG00000136930 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000132341_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132341_fitted_models.rds + jobid: 9949 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132341_fitted_models.rds + wildcards: gene=ENSG00000132341 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000138430_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138430_fitted_models.rds + jobid: 2192 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138430_fitted_models.rds + wildcards: gene=ENSG00000138430 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000159217_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000159217_fitted_models.rds + jobid: 12499 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000159217_fitted_models.rds + wildcards: gene=ENSG00000159217 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000117523_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117523_fitted_models.rds + jobid: 1151 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000117523_fitted_models.rds + wildcards: gene=ENSG00000117523 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000182912_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182912_fitted_models.rds + jobid: 15141 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182912_fitted_models.rds + wildcards: gene=ENSG00000182912 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000104852_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104852_fitted_models.rds + jobid: 14373 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104852_fitted_models.rds + wildcards: gene=ENSG00000104852 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000004864_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000004864_fitted_models.rds + jobid: 5726 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000004864_fitted_models.rds + wildcards: gene=ENSG00000004864 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000174938_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000174938_fitted_models.rds + jobid: 11538 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000174938_fitted_models.rds + wildcards: gene=ENSG00000174938 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000132661_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132661_fitted_models.rds + jobid: 13189 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000132661_fitted_models.rds + wildcards: gene=ENSG00000132661 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000172732_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172732_fitted_models.rds + jobid: 8207 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172732_fitted_models.rds + wildcards: gene=ENSG00000172732 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000161533_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000161533_fitted_models.rds + jobid: 12709 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000161533_fitted_models.rds + wildcards: gene=ENSG00000161533 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000151725_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000151725_fitted_models.rds + jobid: 3875 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000151725_fitted_models.rds + wildcards: gene=ENSG00000151725 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000182004_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182004_fitted_models.rds + jobid: 1276 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182004_fitted_models.rds + wildcards: gene=ENSG00000182004 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000134595_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134595_fitted_models.rds + jobid: 6537 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134595_fitted_models.rds + wildcards: gene=ENSG00000134595 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000124575_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124575_fitted_models.rds + jobid: 4691 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124575_fitted_models.rds + wildcards: gene=ENSG00000124575 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000087088_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000087088_fitted_models.rds + jobid: 14368 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000087088_fitted_models.rds + wildcards: gene=ENSG00000087088 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000142910_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142910_fitted_models.rds + jobid: 340 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142910_fitted_models.rds + wildcards: gene=ENSG00000142910 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000223749_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000223749_fitted_models.rds + jobid: 6510 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000223749_fitted_models.rds + wildcards: gene=ENSG00000223749 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000198900_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198900_fitted_models.rds + jobid: 13297 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000198900_fitted_models.rds + wildcards: gene=ENSG00000198900 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000103356_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000103356_fitted_models.rds + jobid: 11480 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000103356_fitted_models.rds + wildcards: gene=ENSG00000103356 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000180822_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000180822_fitted_models.rds + jobid: 4590 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000180822_fitted_models.rds + wildcards: gene=ENSG00000180822 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000134779_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134779_fitted_models.rds + jobid: 12948 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000134779_fitted_models.rds + wildcards: gene=ENSG00000134779 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000125868_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125868_fitted_models.rds + jobid: 13161 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125868_fitted_models.rds + wildcards: gene=ENSG00000125868 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000174791_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000174791_fitted_models.rds + jobid: 8229 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000174791_fitted_models.rds + wildcards: gene=ENSG00000174791 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000160953_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160953_fitted_models.rds + jobid: 13516 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160953_fitted_models.rds + wildcards: gene=ENSG00000160953 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000143621_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143621_fitted_models.rds + jobid: 971 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143621_fitted_models.rds + wildcards: gene=ENSG00000143621 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000152128_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000152128_fitted_models.rds + jobid: 2087 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000152128_fitted_models.rds + wildcards: gene=ENSG00000152128 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000128989_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128989_fitted_models.rds + jobid: 10904 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000128989_fitted_models.rds + wildcards: gene=ENSG00000128989 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100033_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100033_fitted_models.rds + jobid: 14652 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100033_fitted_models.rds + wildcards: gene=ENSG00000100033 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000125834_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125834_fitted_models.rds + jobid: 13092 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125834_fitted_models.rds + wildcards: gene=ENSG00000125834 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000164692_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164692_fitted_models.rds + jobid: 5718 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000164692_fitted_models.rds + wildcards: gene=ENSG00000164692 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000143106_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143106_fitted_models.rds + jobid: 769 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143106_fitted_models.rds + wildcards: gene=ENSG00000143106 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000104332_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104332_fitted_models.rds + jobid: 6787 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000104332_fitted_models.rds + wildcards: gene=ENSG00000104332 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000135446_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135446_fitted_models.rds + jobid: 9597 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135446_fitted_models.rds + wildcards: gene=ENSG00000135446 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000166598_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166598_fitted_models.rds + jobid: 9746 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000166598_fitted_models.rds + wildcards: gene=ENSG00000166598 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000124614_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124614_fitted_models.rds + jobid: 4868 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000124614_fitted_models.rds + wildcards: gene=ENSG00000124614 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000137672_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137672_fitted_models.rds + jobid: 8426 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000137672_fitted_models.rds + wildcards: gene=ENSG00000137672 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000167642_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167642_fitted_models.rds + jobid: 14122 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000167642_fitted_models.rds + wildcards: gene=ENSG00000167642 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000066777_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000066777_fitted_models.rds + jobid: 6863 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000066777_fitted_models.rds + wildcards: gene=ENSG00000066777 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000139163_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000139163_fitted_models.rds + jobid: 9344 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000139163_fitted_models.rds + wildcards: gene=ENSG00000139163 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000179981_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179981_fitted_models.rds + jobid: 13046 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179981_fitted_models.rds + wildcards: gene=ENSG00000179981 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000173402_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173402_fitted_models.rds + jobid: 2760 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000173402_fitted_models.rds + wildcards: gene=ENSG00000173402 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000103024_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000103024_fitted_models.rds + jobid: 11269 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000103024_fitted_models.rds + wildcards: gene=ENSG00000103024 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000240563_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000240563_fitted_models.rds + jobid: 601 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000240563_fitted_models.rds + wildcards: gene=ENSG00000240563 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000115268_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115268_fitted_models.rds + jobid: 13521 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000115268_fitted_models.rds + wildcards: gene=ENSG00000115268 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000008394_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000008394_fitted_models.rds + jobid: 9330 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000008394_fitted_models.rds + wildcards: gene=ENSG00000008394 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000174109_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000174109_fitted_models.rds + jobid: 11261 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000174109_fitted_models.rds + wildcards: gene=ENSG00000174109 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000160710_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160710_fitted_models.rds + jobid: 992 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160710_fitted_models.rds + wildcards: gene=ENSG00000160710 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000182944_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182944_fitted_models.rds + jobid: 14763 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182944_fitted_models.rds + wildcards: gene=ENSG00000182944 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000026559_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000026559_fitted_models.rds + jobid: 13386 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000026559_fitted_models.rds + wildcards: gene=ENSG00000026559 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000094755_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000094755_fitted_models.rds + jobid: 4472 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000094755_fitted_models.rds + wildcards: gene=ENSG00000094755 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000170515_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170515_fitted_models.rds + jobid: 9544 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170515_fitted_models.rds + wildcards: gene=ENSG00000170515 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000138385_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138385_fitted_models.rds + jobid: 2170 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000138385_fitted_models.rds + wildcards: gene=ENSG00000138385 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000205133_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000205133_fitted_models.rds + jobid: 6941 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000205133_fitted_models.rds + wildcards: gene=ENSG00000205133 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000141543_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141543_fitted_models.rds + jobid: 12759 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141543_fitted_models.rds + wildcards: gene=ENSG00000141543 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000185651_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185651_fitted_models.rds + jobid: 14694 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000185651_fitted_models.rds + wildcards: gene=ENSG00000185651 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000099901_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099901_fitted_models.rds + jobid: 14675 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000099901_fitted_models.rds + wildcards: gene=ENSG00000099901 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000149809_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000149809_fitted_models.rds + jobid: 8176 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000149809_fitted_models.rds + wildcards: gene=ENSG00000149809 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100632_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100632_fitted_models.rds + jobid: 10511 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100632_fitted_models.rds + wildcards: gene=ENSG00000100632 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000157214_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000157214_fitted_models.rds + jobid: 5695 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000157214_fitted_models.rds + wildcards: gene=ENSG00000157214 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000174695_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000174695_fitted_models.rds + jobid: 4145 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000174695_fitted_models.rds + wildcards: gene=ENSG00000174695 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000109654_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000109654_fitted_models.rds + jobid: 3804 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000109654_fitted_models.rds + wildcards: gene=ENSG00000109654 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000160948_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160948_fitted_models.rds + jobid: 7149 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160948_fitted_models.rds + wildcards: gene=ENSG00000160948 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000135709_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135709_fitted_models.rds + jobid: 11870 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000135709_fitted_models.rds + wildcards: gene=ENSG00000135709 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000130413_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130413_fitted_models.rds + jobid: 7863 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130413_fitted_models.rds + wildcards: gene=ENSG00000130413 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000142856_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142856_fitted_models.rds + jobid: 608 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142856_fitted_models.rds + wildcards: gene=ENSG00000142856 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000152944_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000152944_fitted_models.rds + jobid: 9358 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000152944_fitted_models.rds + wildcards: gene=ENSG00000152944 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000070831_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000070831_fitted_models.rds + jobid: 226 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000070831_fitted_models.rds + wildcards: gene=ENSG00000070831 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000125144_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125144_fitted_models.rds + jobid: 11664 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000125144_fitted_models.rds + wildcards: gene=ENSG00000125144 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000049245_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000049245_fitted_models.rds + jobid: 97 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000049245_fitted_models.rds + wildcards: gene=ENSG00000049245 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000170035_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170035_fitted_models.rds + jobid: 2223 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000170035_fitted_models.rds + wildcards: gene=ENSG00000170035 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000111186_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111186_fitted_models.rds + jobid: 9192 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000111186_fitted_models.rds + wildcards: gene=ENSG00000111186 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000143158_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143158_fitted_models.rds + jobid: 1133 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000143158_fitted_models.rds + wildcards: gene=ENSG00000143158 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000100938_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100938_fitted_models.rds + jobid: 10315 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000100938_fitted_models.rds + wildcards: gene=ENSG00000100938 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000110660_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000110660_fitted_models.rds + jobid: 8445 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000110660_fitted_models.rds + wildcards: gene=ENSG00000110660 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000103257_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000103257_fitted_models.rds + jobid: 11887 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000103257_fitted_models.rds + wildcards: gene=ENSG00000103257 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000116560_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116560_fitted_models.rds + jobid: 385 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116560_fitted_models.rds + wildcards: gene=ENSG00000116560 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000146918_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000146918_fitted_models.rds + jobid: 6072 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000146918_fitted_models.rds + wildcards: gene=ENSG00000146918 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000184709_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184709_fitted_models.rds + jobid: 7740 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184709_fitted_models.rds + wildcards: gene=ENSG00000184709 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000055609_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000055609_fitted_models.rds + jobid: 6054 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000055609_fitted_models.rds + wildcards: gene=ENSG00000055609 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +rule partition_variance: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/ENSG00000171159_icc.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171159_fitted_models.rds + jobid: 7604 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000171159_fitted_models.rds + wildcards: gene=ENSG00000171159 + resources: mem_per_thread_gb=16, disk_per_thread_gb=16 + + +[Sun Apr 17 18:22:50 2022] +localrule all: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000279457_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000228463_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000237491_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000225880_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000230368_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000187634_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188976_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000187961_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000187583_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188290_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000187608_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000188157_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131591_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000272141_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162571_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000186891_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000078808_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000176022_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000184163_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160087_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162572_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000131584_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000169972_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000127054_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000224051_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000107404_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162576_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175756_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000221978_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000242485_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000272455_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000235098_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000179403_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000215915_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160072_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197785_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000205090_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000160075_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000215014_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000228594_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000272106_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000197530_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000189409_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000248333_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000189339_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000008128_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000215790_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000008130_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000078369_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000178821_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000187730_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000067606_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000182873_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162585_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000157933_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116151_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000157916_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000157911_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000157881_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000272449_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000157870_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000237058_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130762_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000162591_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000158109_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000116213_fitted_models.rds, 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/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000142871_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000146904_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000105248_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000130962_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000175183_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000140995_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141428_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000172115_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000141971_fitted_models.rds, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/ENSG00000157106_fitted_models.rds + +Job counts: + count jobs + 1 all + 2935 partition_variance + 2936 +This was a dry-run (flag -n). The order of jobs does not reflect the order of execution. diff --git a/Variance/post_review_cryo2/variance_partition_post_review_combine_cryo.R b/Variance/post_review_cryo2/variance_partition_post_review_combine_cryo.R new file mode 100644 index 0000000..bf1f919 --- /dev/null +++ b/Variance/post_review_cryo2/variance_partition_post_review_combine_cryo.R @@ -0,0 +1,764 @@ +##### Reason: combine the results for the variance explained by different factors for each gene +##### Author: Drew Neavin +##### Date: 14 March, 2022 + + +##### Load in libraries ##### +library(data.table) +library(tidyverse) +library(ggridges) +library(raincloudplots) +library(ggdist) +library(clusterProfiler) +library(org.Hs.eg.db) +library(GOSemSim) +library(RColorBrewer) + + + +##### Set up directories ##### +dir <- "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/" +icc_dir <- "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/" +icc_interaction_dir <- "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc_interaction/" +outdir <- "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/combined/" + +dir.create(outdir, recursive = TRUE) + + +vars <- c("Line", "Village", "Cryopreserved", "Site", "Replicate","Line:Village", "Line:Cryopreserved", "Line:Site", "Village:Cryopreserved","Village:Site", "Replicate:Village", "Replicate:Line","Replicate:Cryopreserved", "Replicate:Site", "Residual") +selected_vars <- c("Line", "Village", "Cryopreserved", "Replicate","Line:Village", "Line:Cryopreserved", "Village:Cryopreserved", "Replicate:Village", "Replicate:Line", "Replicate:Cryopreserved", "Residual") +var_colors <- c("#4734a9", rev(c("#115cc7", "#a4c3c8", "#499090", "#405940", "#685a54", "#f7d312", "#f8bf33", "#e4910e", "#f65d19", "#931519", "#f2c1ce", "#e17aab", "#a186aa")), "gray90") +# var_colors <- c("#bb0a1e", "#fde64b", "#006ee6", "#014421", "#DC7835", "#733fd7", "#62BD69", "#abd302", "#6b3e2e", "#88d5d2", "gray90") +names(var_colors) <- vars + +var_colors <- var_colors[selected_vars] + + + +##### Get list of icc files ##### +icc_files <- list.files(icc_dir) + + + +##### Read in icc results ##### +icc_results_list <- lapply(icc_files, function(x){ + readRDS(paste0(icc_dir,x)) +}) +names(icc_results_list) <- icc_files + + + +##### Get list of icc interaction files ##### +icc_interaction_files <- list.files(icc_interaction_dir, pattern = "_icc.rds") + + + +##### Read in icc results ##### +icc_interaction_results_list <- lapply(icc_interaction_files, function(x){ + readRDS(paste0(icc_interaction_dir,x)) +}) +names(icc_interaction_results_list) <- icc_interaction_files + + + +##### Merge icc results into a single data.table ##### +icc_dt <- do.call(rbind, icc_results_list) + +icc_dt$percent_round <- round(icc_dt$percent) + +icc_dt$grp <- factor(icc_dt$grp, levels= rev(c("Line", "Village", "Cryopreserved", "Replicate","Line:Village", "Line:Cryopreserved", "Village:Cryopreserved", "Replicate:Village", "Replicate:Line", "Replicate:Cryopreserved", "Residual"))) + +group_size <- data.table(table(icc_dt$grp)) +colnames(group_size) <- c("grp", "size") +group_size$grp_size <- paste0(group_size$grp, "\nN = ", group_size$size) + +icc_dt <- group_size[icc_dt, on = "grp"] +icc_dt$grp_size <- factor(icc_dt$grp_size, levels = unique(group_size$grp_size)) + + +##### Merge icc_interaction results into a single data.table ##### +icc_interaction_dt <- do.call(rbind, icc_interaction_results_list) + +icc_interaction_dt$percent_round <- round(icc_interaction_dt$percent) + +icc_interaction_dt$grp <- factor(icc_interaction_dt$grp, levels= rev(c("Line", "Village", "Cryopreserved", "Replicate","Line:Village", "Line:Cryopreserved", "Village:Cryopreserved", "Replicate:Village", "Replicate:Line", "Replicate:Cryopreserved", "Residual"))) + +group_size <- data.table(table(icc_interaction_dt$grp)) +colnames(group_size) <- c("grp", "size") +group_size$grp_size <- paste0(group_size$grp, "\nN = ", group_size$size) + +icc_interaction_dt <- group_size[icc_interaction_dt, on = "grp"] +icc_interaction_dt$grp_size <- factor(icc_interaction_dt$grp_size, levels = unique(group_size$grp_size)) + +### *** Need to add individual effects without interaction in to interaction dt *** ### +icc_interaction_plus_dt <- rbind(icc_interaction_dt, icc_dt[!(gene %in% icc_interaction_dt$gene)]) + + +group_size <- data.table(table(icc_interaction_plus_dt$grp)) +colnames(group_size) <- c("grp", "size") +group_size$grp_size <- paste0(group_size$grp, "\nN = ", group_size$size) + +icc_interaction_plus_dt <- group_size[icc_interaction_plus_dt, on = "grp"] +icc_interaction_plus_dt$grp_size <- factor(icc_interaction_plus_dt$grp_size, levels = unique(group_size$grp_size)) + + + +##### Check difference in percent explained with and without interactions ##### +icc_interaction_dt_joined <- icc_dt[icc_interaction_dt, on = c("grp", "gene")] + +icc_interaction_dt_joined$difference <- icc_interaction_dt_joined$percent - icc_interaction_dt_joined$i.percent + + +pRaincloud_dif <- ggplot(icc_interaction_dt_joined, aes(x = difference, y = factor(grp_size, levels = rev(levels(grp_size))), fill = factor(grp, levels = rev(selected_vars)))) + + geom_density_ridges(stat = "binline", bins = 90, scale = 0.7, draw_baseline = FALSE, aes(height =..ndensity..), alpha = 0.75) + + geom_boxplot(size = 0.5,width = .15, outlier.size = 0.25, position = position_nudge(y=-0.12), alpha = 0.75) + + coord_cartesian(xlim = c(1.2, NA), clip = "off") + + theme_classic() + + theme(axis.title.y=element_blank()) + + xlab("Percent Variance Explained") + + scale_y_discrete(expand = c(0.03, 0)) + + scale_fill_manual(values = var_colors) + +ggsave(pRaincloud_dif, filename = paste0(outdir, "variance_explained_interaction_difference_raincloud.png"), height = 8, width = 7) +ggsave(pRaincloud_dif, filename = paste0(outdir, "variance_explained_interaction_difference_raincloud.pdf"), height = 8, width = 7) + + + +##### Make a figure of stacked variance explained ##### +### Order based on line variance explained ### +genes_list <- list() + +for (group in c("Line", "Village", "Cryopreserved", "Replicate","Line:Village", "Line:Cryopreserved", "Village:Cryopreserved", "Replicate:Village", "Replicate:Line", "Replicate:Cryopreserved", "Residual")){ + genes_list[[group]] <- icc_dt[grp == group][rev(order(percent_round))]$gene +} + +genes <- unique(unlist(genes_list)) + +icc_dt$gene <- factor(icc_dt$gene, levels = genes) + +icc_dt$grp <- factor(icc_dt$grp, levels= rev(c("Line", "Village", "Cryopreserved", "Replicate","Line:Village", "Line:Cryopreserved", "Village:Cryopreserved", "Replicate:Village", "Replicate:Line", "Replicate:Cryopreserved", "Residual"))) + + +## First on line percent, then village percent ## +bar_proportions <- ggplot(icc_dt, aes(x = gene, y = percent, fill = grp)) + + geom_bar(position="stack", stat="identity") + + theme_classic() + + theme(axis.title.x=element_blank(), + axis.text.x=element_blank(), + axis.ticks.x=element_blank()) + +ggsave(bar_proportions, filename = paste0(outdir, "variance_explained_bar.png"), width = 20) + + + +### Try boxplot ### +boxplot <- ggplot(icc_dt, aes(x = factor(grp, levels = rev(levels(grp))), y = percent, fill = factor(grp, levels = rev(levels(grp))), color = factor(grp, levels = rev(levels(grp))))) + + geom_boxplot(alpha = 0.5, size = 0.5) + + theme_classic() + + xlab("Covariate") + + theme(axis.text.x = element_text(angle = 90, vjust = 0.5, hjust=1), + legend.position="none") + +ggsave(boxplot, filename = paste0(outdir, "variance_explained_box.png"), height = 4, width = 5) + + +### Try ridgplots ### +pRidges <- ggplot(icc_dt[grp != "Residual"], aes(x = percent, y = factor(grp, levels = rev(levels(grp))), fill = factor(grp, levels = rev(levels(grp))))) + + geom_density_ridges(stat = "binline", bins = 200, scale = 0.95, draw_baseline = FALSE) + + # geom_density_ridges() + + theme_classic() + +ggsave(pRidges, filename = paste0(outdir, "variance_explained_ridge.png"), height = 8, width = 10) + +### Try ridgplots ### +pRidges_pop <- ggplot(icc_dt[grp != "Residual"][percent > 10], aes(x = percent, y = factor(grp, levels = rev(levels(grp))), fill = factor(grp, levels = rev(levels(grp))))) + + geom_density_ridges(stat = "binline", bins = 180, scale = 0.95, draw_baseline = FALSE) + + # geom_density_ridges() + + theme_classic() + +ggsave(pRidges_pop, filename = paste0(outdir, "variance_explained_ridge_pop.png"), height = 8, width = 10) + + +pRaincloud <- ggplot(icc_dt, aes(x = percent, y = factor(grp_size, levels = rev(levels(grp_size))), fill = factor(grp, levels = rev(vars)))) + + geom_density_ridges(stat = "binline", bins = 90, scale = 0.7, draw_baseline = FALSE, aes(height =..ndensity..), alpha = 0.75) + + geom_boxplot(size = 0.5,width = .15, outlier.size = 0.25, position = position_nudge(y=-0.12), alpha = 0.75) + + coord_cartesian(xlim = c(1.2, NA), clip = "off") + + theme_classic() + + theme(axis.title.y=element_blank()) + + xlab("Percent Variance Explained") + + scale_y_discrete(expand = c(0.03, 0)) + + scale_fill_manual(values = var_colors) + +ggsave(pRaincloud, filename = paste0(outdir, "variance_explained_raincloud.png"), height = 8, width = 7) +ggsave(pRaincloud, filename = paste0(outdir, "variance_explained_raincloud.pdf"), height = 8, width = 7) + + + +icc_interaction_plus_dt$grp_size <- factor(icc_interaction_plus_dt$grp_size, levels = c("Line\nN = 9691", "Village\nN = 9297", "Cryopreserved\nN = 9137", "Replicate\nN = 2973", "Line:Village\nN = 3512", "Line:Cryopreserved\nN = 1680", "Village:Cryopreserved\nN = 2732", "Replicate:Village\nN = 646", "Replicate:Line\nN = 112", "Replicate:Cryopreserved\nN = 777", "Residual\nN = 10827")) + +pRaincloud_interaction <- ggplot(icc_interaction_plus_dt, aes(x = percent, y = grp_size, fill = factor(grp, levels = rev(vars)))) + + geom_density_ridges(stat = "binline", bins = 100, scale = 0.7, draw_baseline = FALSE, aes(height =..ndensity..), alpha = 0.75) + + geom_boxplot(size = 0.5,width = .15, outlier.size = 0.25, position = position_nudge(y=-0.12), alpha = 0.75) + + coord_cartesian(xlim = c(1.2, NA), clip = "off") + + theme_classic() + + theme(axis.title.y=element_blank()) + + xlab("Percent Variance Explained") + + scale_y_discrete(expand = c(0.03, 0)) + + scale_fill_manual(values = var_colors) + + geom_vline(xintercept = 1, linetype = "dashed", color = "red") + +ggsave(pRaincloud_interaction, filename = paste0(outdir, "variance_explained_raincloud_interaction.png"), height = 8, width = 7) +ggsave(pRaincloud_interaction, filename = paste0(outdir, "variance_explained_raincloud_interaction.pdf"), height = 8, width = 7) + + + +icc_interaction_sig_list <- list() + +for (ensg in unique(icc_interaction_plus_dt$gene)){ + icc_interaction_sig_list[[ensg]] <- icc_interaction_plus_dt[gene == ensg][P < 0.05/(nrow(icc_interaction_plus_dt[gene == ensg])-1)] + icc_interaction_sig_list[[ensg]] <- rbind(icc_interaction_sig_list[[ensg]], icc_interaction_plus_dt[gene == ensg & grp == "Residual"]) +} + +icc_interaction_sig_dt <- do.call(rbind, icc_interaction_sig_list) + + + +group_size <- data.table(table(icc_interaction_sig_dt$grp)) +colnames(group_size) <- c("grp", "size") +group_size$grp_size <- paste0(group_size$grp, "\nN = ", group_size$size) + +icc_interaction_sig_dt <- group_size[icc_interaction_sig_dt, on = "grp"] +icc_interaction_sig_dt$grp_size <- factor(icc_interaction_sig_dt$grp_size, levels = unique(group_size$grp_size)) + + +grp_size_order <- c("Line\nN = 5281", "Village\nN = 4537", "Cryopreserved\nN = 5169", "Replicate\nN = 1509", "Line:Village\nN = 3303", "Line:Cryopreserved\nN = 1556", "Village:Cryopreserved\nN = 2546","Replicate:Village\nN = 577", "Replicate:Line\nN = 86", "Replicate:Cryopreserved\nN = 686", "Residual\nN = 10827") + + +pRaincloud_interaction_sig <- ggplot(icc_interaction_sig_dt, aes(x = percent, y = factor(grp_size, levels = grp_size_order), fill = factor(grp, levels = rev(vars)))) + + geom_density_ridges(stat = "binline", bins = 100, scale = 0.7, draw_baseline = FALSE, aes(height =..ndensity..), alpha = 0.75) + + geom_boxplot(size = 0.5,width = .15, outlier.size = 0.25, position = position_nudge(y=-0.12), alpha = 0.75) + + coord_cartesian(xlim = c(1.2, NA), clip = "off") + + theme_classic() + + theme(axis.title.y=element_blank()) + + xlab("Percent Variance Explained") + + scale_y_discrete(expand = c(0.03, 0)) + + scale_fill_manual(values = var_colors) + + geom_vline(xintercept = 1, linetype = "dashed", color = "firebrick3") + +ggsave(pRaincloud_interaction_sig, filename = paste0(outdir, "variance_explained_raincloud_interaction_significant.png"), height = 8, width = 7) +ggsave(pRaincloud_interaction_sig, filename = paste0(outdir, "variance_explained_raincloud_interaction_significant.pdf"), height = 8, width = 7) + + +total <- icc_interaction_sig_dt[,.(count = .N), by = .(grp)] +total_less1pct <- icc_interaction_sig_dt[percent <= 1][,.(count_less_1pct = .N), by = .(grp)] +total_less5pct <- icc_interaction_sig_dt[percent <= 5][,.(count_less_5pct = .N), by = .(grp)] +total_less10pct <- icc_interaction_sig_dt[percent <= 10][,.(count_less_10pct = .N), by = .(grp)] +summary <- total[total_less1pct, on = "grp"] +summary <- summary[total_less5pct, on = "grp"] +summary <- summary[total_less10pct, on = "grp"] +summary$count_greater_1pct <- summary$count - summary$count_less_1pct +summary$count_greater_5pct <- summary$count - summary$count_less_5pct +summary$count_greater_10pct <- summary$count - summary$count_less_10pct +summary$percent_1pct <- (summary$count_less_1pct/summary$count)*100 +summary$percent_5pct <- (summary$count_less_5pct/summary$count)*100 +summary$percent_10pct <- (summary$count_less_10pct/summary$count)*100 + + +pRaincloud_interaction_sig_1pct <- ggplot(icc_interaction_sig_dt[percent >= 1], aes(x = percent, y = factor(grp_size, levels = grp_size_order), fill = factor(grp, levels = rev(vars)))) + + geom_density_ridges(stat = "binline", bins = 90, scale = 0.7, draw_baseline = FALSE, aes(height =..ndensity..), alpha = 0.75) + + geom_boxplot(size = 0.5,width = .15, outlier.size = 0.25, position = position_nudge(y=-0.12), alpha = 0.75) + + coord_cartesian(xlim = c(1.2, NA), clip = "off") + + theme_classic() + + theme(axis.title.y=element_blank()) + + xlab("Percent Variance Explained") + + scale_y_discrete(expand = c(0.03, 0)) + + scale_fill_manual(values = var_colors) + + geom_vline(xintercept = 1, linetype = "dashed", color = "firebrick3") + +ggsave(pRaincloud_interaction_sig_1pct, filename = paste0(outdir, "variance_explained_raincloud_interaction_significant_1pct.png"), height = 8, width = 7) +ggsave(pRaincloud_interaction_sig_1pct, filename = paste0(outdir, "variance_explained_raincloud_interaction_significant_1pct.pdf"), height = 8, width = 7) + + + + +##### Pull just the significant variances genome-wide ##### +icc_interaction_plus_dt$fdr <- p.adjust(icc_interaction_plus_dt$P, method="fdr") +icc_interaction_sig_gw_dt <- icc_interaction_plus_dt[fdr < 0.05 | is.na(fdr)] + +group_size_sig_gw <- data.table(table(icc_interaction_sig_gw_dt$grp)) +colnames(group_size_sig_gw) <- c("grp", "size") +group_size_sig_gw$grp_size <- paste0(group_size_sig_gw$grp, "\nN = ", formatC(group_size_sig_gw$size, format="d", big.mark=",")) + +icc_interaction_sig_gw_dt <- group_size_sig_gw[icc_interaction_sig_gw_dt, on = "grp"] +icc_interaction_sig_gw_dt$grp_size <- factor(icc_interaction_sig_gw_dt$grp_size, levels = unique(group_size_sig_gw$grp_size)) + + +group_size_sig_gw_order <- c("Line\nN = 5,695", "Village\nN = 5,087", "Cryopreserved\nN = 5,668", "Replicate\nN = 1,800", "Line:Village\nN = 3,502", "Line:Cryopreserved\nN = 1,671", "Village:Cryopreserved\nN = 2,731","Replicate:Village\nN = 646", "Replicate:Line\nN = 112", "Replicate:Cryopreserved\nN = 776", "Residual\nN = 10,827") + + +pRaincloud_interaction_sig_gw <- ggplot(icc_interaction_sig_gw_dt, aes(x = percent, y = factor(grp_size, levels = group_size_sig_gw_order), fill = factor(grp, levels = rev(vars)))) + + geom_density_ridges(stat = "binline", bins = 100, scale = 0.7, draw_baseline = FALSE, aes(height =..ndensity..), alpha = 0.75) + + geom_boxplot(size = 0.5,width = .15, outlier.size = 0.25, position = position_nudge(y=-0.12), alpha = 0.75) + + coord_cartesian(xlim = c(1.2, NA), clip = "off") + + theme_classic() + + theme(axis.title.y=element_blank()) + + xlab("Percent Variance Explained") + + scale_y_discrete(expand = c(0.03, 0)) + + scale_fill_manual(values = var_colors) + + geom_vline(xintercept = 1, linetype = "dashed", color = "firebrick3") + + labs(fill="Covariate") + +ggsave(pRaincloud_interaction_sig_gw, filename = paste0(outdir, "variance_explained_raincloud_interaction_significant_genome_wide.png"), height = 8, width = 7) +ggsave(pRaincloud_interaction_sig_gw, filename = paste0(outdir, "variance_explained_raincloud_interaction_significant_genome_wide.pdf"), height = 8, width = 7) + + + + + + + + + + + + + + + + + +icc_interaction_sig_dt[gene == "ENSG00000106153"] +icc_dt[gene == "ENSG00000106153"] +icc_interaction_plus_dt[gene == "ENSG00000106153"] +icc_interaction_sig_gw_dt[gene == "ENSG00000106153"] +icc_interaction_sig_gw_dt2[gene == "ENSG00000106153"] + + + + + + + +##### Add gene IDs for easy identification downstream ##### +GeneConversion1 <- read_delim("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/data/Expression_200128_A00152_0196_BH3HNFDSXY/GE/DRENEA_1/outs/filtered_feature_bc_matrix/features.tsv.gz", col_names = F, delim = "\t") +GeneConversion2 <- read_delim("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/data/Expression_200128_A00152_0196_BH3HNFDSXY/GE/Village_B_1_week/outs/filtered_feature_bc_matrix/features.tsv.gz", col_names = F, delim = "\t") + +GeneConversion <- unique(rbind(GeneConversion1, GeneConversion2)) +GeneConversion <- GeneConversion[!duplicated(GeneConversion$X1),] +GeneConversion$X3 <- NULL +colnames(GeneConversion) <- c("gene", "Gene_ID") + +GeneConversion <- data.table(GeneConversion) + + +### Add the gene IDs to the icc_dt ### + +icc_interaction_sig_gw_dt <- GeneConversion[icc_interaction_sig_gw_dt, on = "gene"] + +icc_interaction_sig_gw_dt[grp == "Cryopreserved"& percent_round > 1][rev(order(percent))]$Gene_ID +head(icc_interaction_sig_gw_dt[grp == "Cryopreserved" & percent_round > 1][rev(order(percent))][,c("Gene_ID", "percent_round")], n = 50) +icc_interaction_sig_gw_dt[grp == "Line"][rev(order(percent))]$Gene_ID +head(icc_interaction_sig_gw_dt[grp == "Line" & percent_round > 1][rev(order(percent))][,c("Gene_ID", "percent_round")], n = 50) +icc_interaction_sig_gw_dt[grp == "Village"][rev(order(percent))]$Gene_ID +head(icc_interaction_sig_gw_dt[grp == "Village" & percent_round > 1][rev(order(percent))][,c("Gene_ID", "percent_round")], n = 50) + +fwrite(icc_interaction_sig_gw_dt, paste0(outdir, "sig_results.tsv.gz"), sep = "\t", compress = "gzip") + +## Highlight +## X chromosome genes - wouldn't expect these to be Line-biased because expressed by both males and females +## Y chromosome genes - should be line-biased because expressed by only males and have some male(s) and some female(s) +## mt genes +## ribosomal genes +## look at gsea and kegg pathways for each + +## Read in gtf used as reference and pull just X, Y or MT chromosome genes from it, use ribosomal file for rb genes +gtf <- fread("/directflow/GWCCGPipeline/projects/reference/refdata-cellranger-GRCh38-3.0.0/genes/genes.gtf", sep = "\t", autostart = 6, header = FALSE) + +gtf_genes <- gtf[!(grep("transcript_id", V9))] + +gtf_genes$V9 <- gsub("gene_id \"", "",gtf_genes$V9 ) %>% + gsub("\"; gene_version \"", ";", .) %>% + gsub("\"; gene_name \"", ";", .) %>% + gsub("\"; gene_source \"", ";", .) %>% + gsub("\"; gene_biotype \"", ";", .) %>% + gsub("\"", "", .) + +gtf_genes[, c("gene_id", "gene_version", "gene_name", "gene_source", "gene_biotype") := data.table(str_split_fixed(V9,";", 5))] + +icc_interaction_plus_dt <- GeneConversion[icc_interaction_plus_dt, on = "gene"] + + + +X_chromosome_genes <- gtf_genes[V1 == "X"] +X_genelist <- X_chromosome_genes$gene_id[X_chromosome_genes$gene_id %in% genes] +Y_chromosome_genes <- gtf_genes[V1 == "Y"] +Y_genelist <- Y_chromosome_genes$gene_id[Y_chromosome_genes$gene_id %in% genes] +MT_chromosome_genes <- gtf_genes[V1 == "MT"] +MT_genelist <- MT_chromosome_genes$gene_id[MT_chromosome_genes$gene_id %in% genes] +RbGeneList <- read.delim(file = "/directflow/SCCGGroupShare/projects/DrewNeavin/References/RibosomalGeneList_GeneID_ENSG.txt") +Rb_genelist <- RbGeneList$ENSG[RbGeneList$ENSG %in% genes] + + +### Make stacked bar plots of the variance explained by different factors for these gene groups + + + + +## Figure of x chromosome genes ## +icc_x <- icc_interaction_plus_dt[data.table(gene = icc_interaction_plus_dt[grp == "Residual"][gene %in% X_genelist][order(percent_round)]$gene), on = "gene"] +icc_x$grp <- factor(icc_x$grp, levels = rev(selected_vars)) +icc_x$gene <- factor(icc_x$gene, levels = unique(icc_x$gene)) + +bar_proportions_x <- ggplot(icc_x, aes(x = gene, y = percent, fill = grp)) + + geom_bar(position="stack", stat="identity", alpha = 0.75) + + theme_classic() + + theme(axis.title.x=element_blank(), + axis.text.x=element_blank(), + axis.ticks.x=element_blank(), + plot.title = element_text(hjust = 0.5)) + + scale_fill_manual(values = var_colors) + + ggtitle("Variance Explained of\nX Chromosome Genes") + + +ggsave(bar_proportions_x, filename = paste0(outdir, "variance_explained_bar_x_genes.png"), width = 20) + + +## Figure of y chromosome genes ## +icc_y <- icc_interaction_plus_dt[data.table(gene = icc_interaction_plus_dt[grp == "Residual"][gene %in% Y_genelist][order(percent_round)]$gene), on = "gene"] +icc_y$grp <- factor(icc_y$grp, levels = rev(selected_vars)) +icc_y$gene <- factor(icc_y$gene, levels = unique(icc_y$gene)) +icc_y$Gene_ID <- factor(icc_y$Gene_ID, levels = unique(icc_y$Gene_ID)) + + +bar_proportions_y <- ggplot(icc_y, aes(x = Gene_ID, y = percent, fill = grp)) + + geom_bar(position="stack", stat="identity", alpha = 0.75) + + theme_classic() + + theme(axis.title.x=element_blank(), + # axis.text.x=element_blank(), + # axis.ticks.x=element_blank(), + plot.title = element_text(hjust = 0.5), + axis.text.x = element_text(angle = 90, vjust = 0.5, hjust=1)) + + scale_fill_manual(values = var_colors) + + scale_y_continuous(expand = c(0, 0)) + + ggtitle("Variance Explained of\nY Chromosome Genes") + + ylab("Percent") + + +ggsave(bar_proportions_y, filename = paste0(outdir, "variance_explained_bar_y_genes.png"), width = 4.5, height = 4.5) +ggsave(bar_proportions_y, filename = paste0(outdir, "variance_explained_bar_y_genes.pdf"), width = 4.5, height = 4.5) + + + +## Figure of mt chromosome genes ## +icc_mt <- icc_interaction_plus_dt[data.table(gene = icc_interaction_plus_dt[grp == "Residual"][gene %in% MT_genelist][order(percent_round)]$gene), on = "gene"] +icc_mt$grp <- factor(icc_mt$grp, levels = rev(selected_vars)) +icc_mt$gene <- factor(icc_mt$gene, levels = unique(icc_mt$gene)) +icc_mt$Gene_ID <- factor(icc_mt$Gene_ID, levels = unique(icc_mt$Gene_ID)) + + +bar_proportions_mt <- ggplot(icc_mt, aes(x = Gene_ID, y = percent, fill = grp)) + + geom_bar(position="stack", stat="identity", alpha = 0.75) + + theme_classic() + + theme(axis.title.x=element_blank(), + # axis.text.x=element_blank(), + # axis.ticks.x=element_blank(), + plot.title = element_text(hjust = 0.5), + axis.text.x = element_text(angle = 90, vjust = 0.5, hjust=1)) + + scale_fill_manual(values = var_colors) + + scale_y_continuous(expand = c(0, 0)) + + ggtitle("Variance Explained of\nMitochondrial Genes") + + ylab("Percent") + +ggsave(bar_proportions_mt, filename = paste0(outdir, "variance_explained_bar_mt_genes.png"), width = 4.5, height = 4.5) +ggsave(bar_proportions_mt, filename = paste0(outdir, "variance_explained_bar_mt_genes.pdf"), width = 4.5, height = 4.5) + + + +## Figure of mt chromosome genes ## +icc_rb <- icc_interaction_plus_dt[data.table(gene = icc_interaction_plus_dt[grp == "Residual"][gene %in% Rb_genelist][order(percent_round)]$gene), on = "gene"] +icc_rb$grp <- factor(icc_rb$grp, levels = rev(selected_vars)) +icc_rb$gene <- factor(icc_rb$gene, levels = unique(icc_rb$gene)) + + +bar_proportions_rb <- ggplot(icc_rb, aes(x = gene, y = percent, fill = grp)) + + geom_bar(position="stack", stat="identity", alpha = 0.75) + + theme_classic() + + theme(axis.title.x=element_blank(), + axis.text.x=element_blank(), + axis.ticks.x=element_blank(), + plot.title = element_text(hjust = 0.5)) + + scale_fill_manual(values = var_colors) + + scale_y_continuous(expand = c(0, 0)) + + ggtitle("Variance Explained\nof Ribosomal Genes") + + +ggsave(bar_proportions_rb, filename = paste0(outdir, "variance_explained_bar_rb_genes.png"), width = 10, height = 4) +ggsave(bar_proportions_rb, filename = paste0(outdir, "variance_explained_bar_rb_genes.pdf"), width = 10, height = 4) + + +### Plot Pluripotency Genes ### +pluri_genes <- fread(paste0(dir,"data/pluripotency_genes.tsv"), sep = "\t", col.names = "Gene_ID", header = FALSE) + + +pluri_genes <- GeneConversion[pluri_genes, on = "Gene_ID"] + + +icc_dt_pluri_genes <- icc_interaction_plus_dt[pluri_genes,on = c("gene")] +icc_dt_pluri_genes$grp <- factor(icc_dt_pluri_genes$grp, levels = rev(selected_vars)) +icc_dt_pluri_genes <- icc_dt_pluri_genes[data.table(gene = icc_dt_pluri_genes[grp == "Residual"][order(percent)]$gene), on = "gene"] +icc_dt_pluri_genes$Gene_ID <- factor(icc_dt_pluri_genes$Gene_ID, levels = unique(icc_dt_pluri_genes$Gene_ID)) + + + +pPluri_Genes_Cont <- ggplot() + + geom_bar(data = icc_dt_pluri_genes, aes(Gene_ID, percent, fill = grp), position = "stack", stat = "identity", alpha = 0.75) + + theme_classic() + + # facet_wrap(Gene_ID ~ ., nrow = 3) + + scale_fill_manual(values = var_colors) + + theme(plot.title = element_text(hjust = 0.5), + axis.text.x = element_text(angle = 90, vjust = 0.5, hjust=1)) + + ylab("Percent Gene Expression Variance Explained") + + ggtitle("Variance Explained of\nPluripotency Genes") + + theme(axis.title.x=element_blank()) + +ggsave(pPluri_Genes_Cont, filename = paste0(outdir, "Pluripotent_Gene_Variable_Contributions.png"), width = 6, height = 4.5) +ggsave(pPluri_Genes_Cont, filename = paste0(outdir, "Pluripotent_Gene_Variable_Contributions.pdf"), width = 6, height = 4.5) + + + +##### check for variance explained for eQTL genes (from Kilpinen et al) that are ##### +eqtls <- fread("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/gene_snp_list.tsv", sep = "\t") + + +eqtls_icc <- icc_interaction_plus_dt[unique(eqtls[,"gene"]), on = "gene"] +eqtls_icc$grp <- factor(eqtls_icc$grp, levels = rev(vars)) +eqtls_icc <- eqtls_icc[data.table(gene = eqtls_icc[grp == "Residual"][order(percent)]$gene), on = "gene"] +eqtls_icc$Gene_ID <- factor(eqtls_icc$Gene_ID, levels = unique(eqtls_icc$Gene_ID)) + + +group_size_eqtl <- data.table(table(eqtls_icc$grp)) +colnames(group_size_eqtl) <- c("grp", "size") +group_size_eqtl$grp_size <- paste0(group_size_eqtl$grp, "\nN = ", group_size_eqtl$size) + +eqtls_icc <- group_size_eqtl[eqtls_icc, on = "grp"] +grp_size_order_eqtl <- c("Line\nN = 2371", "Village\nN = 1836", "Site\nN = 2461", "Replicate\nN = 869", "Line:Village\nN = 367", "Line:Site\nN = 911", "Village:Site\nN = 898","Replicate:Village\nN = 305", "Replicate:Line\nN = 25", "Replicate:Site\nN = 78", "Residual\nN = 2542") +eqtls_icc$grp_size <- factor(eqtls_icc$grp_size, levels = grp_size_order_eqtl) + + + +eqtls_icc_1pct <- eqtls_icc + + +for (ensg in unique(eqtls_icc$gene)){ + if (!any(eqtls_icc[gene == ensg & grp != "Residual"]$percent > 1)){ + eqtls_icc_1pct <- eqtls_icc_1pct[gene != ensg] + } +} + + + +eqtls_icc_1pct_grouped_list <- list() + + +for (ensg in unique(eqtls_icc_1pct$gene)){ + group <- eqtls_icc_1pct[gene == ensg & grp != "Residual"][which.max(percent)]$grp + eqtls_icc_1pct_grouped_list[[group]][[ensg]] <- eqtls_icc_1pct[gene == ensg] +} + +eqtls_icc_1pct_grouped <- lapply(eqtls_icc_1pct_grouped_list, function(x) do.call(rbind, x)) +eqtls_icc_1pct_grouped <- lapply(names(eqtls_icc_1pct_grouped), function(x){ + eqtls_icc_1pct_grouped[[x]]$largest_contributor <- x + return(eqtls_icc_1pct_grouped[[x]]) +}) + +eqtls_icc_1pct_grouped_dt <- do.call(rbind, eqtls_icc_1pct_grouped) + +eqtls_icc_1pct_grouped_dt$largest_contributor <- factor(eqtls_icc_1pct_grouped_dt$largest_contributor, levels = c("Line", "Village", "Site", "Line:Village", "Line:Site", "Village:Site", "Replicate:Village")) + + + +pPluri_Genes_largest_Cont_eqtl <- ggplot() + + geom_bar(data = eqtls_icc_1pct_grouped_dt, aes(Gene_ID, percent, fill = factor(grp, levels = rev(vars))), position = "stack", stat = "identity", alpha = 0.75) + + theme_classic() + + facet_grid(. ~ largest_contributor, scales = "free_x", space = "free_x") + + scale_fill_manual(values = var_colors) + + ylab("Percent Gene Expression Variance Explained") + + theme(axis.title.x=element_blank(), + axis.text.x = element_blank(), + panel.spacing.x=unit(0, "lines"), + axis.ticks.x = element_blank()) + + geom_hline(yintercept = 1, linetype = "dashed") + # scale_y_discrete(expand = c(0.03, 0)) + # scale_x_discrete(expand = c(0.03, 0)) + + +ggsave(pPluri_Genes_largest_Cont_eqtl, filename = paste0(outdir, "eQTL_Genes_Variance_Contributions_1pct_largest_cont.png"), width = 10, height = 4) +ggsave(pPluri_Genes_largest_Cont_eqtl, filename = paste0(outdir, "eQTL_Genes_Variance_Contributions_1pct_largest_cont.pdf"), width = 10, height = 4) + + + + + + + +# ### Count number of each chromosome/gene category type +# ### numbers are the numbers of that category that where a significant percent of variance is explained by this variable +# ### percent of that category that where a significant percent of variance is explained by this variable + +# x_number <- lapply(genes_list, function(x){ +# length(which(x %in% X_chromosome_genes$gene_id)) +# }) + +# x_percent <- lapply(genes_list, function(x){ +# length(which(x %in% X_chromosome_genes$gene_id))/length(X_chromosome_genes$gene_id) +# }) + +# y_number <- lapply(genes_list, function(x){ +# length(which(x %in% Y_chromosome_genes$gene_id)) +# }) + +# y_percent <- lapply(genes_list, function(x){ +# length(which(x %in% Y_chromosome_genes$gene_id))/length(Y_chromosome_genes$gene_id) +# }) + +# mt_number <- lapply(genes_list, function(x){ +# length(which(x %in% MT_chromosome_genes$gene_id)) +# }) + +# mt_percent <- lapply(genes_list, function(x){ +# length(which(x %in% MT_chromosome_genes$gene_id))/length(MT_chromosome_genes$gene_id) +# }) + +# rb_number <- lapply(genes_list, function(x){ +# length(which(x %in% RbGeneList$ENSG)) +# }) + +# rb_percent <- lapply(genes_list, function(x){ +# length(which(x %in% RbGeneList$ENSG))/length(RbGeneList$ENSG) +# }) + + + +# ### for > 1% var explained +# ### Count number of each chromosome/gene category type +# x_number_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% X_chromosome_genes$gene_id)) +# }) +# names(x_number_1) <- vars + +# x_percent_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% X_chromosome_genes$gene_id))/length(X_chromosome_genes$gene_id) +# }) +# names(x_percent_1) <- vars + +# y_number_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% Y_chromosome_genes$gene_id)) +# }) +# names(y_number_1) <- vars + +# y_percent_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% Y_chromosome_genes$gene_id))/length(Y_chromosome_genes$gene_id) +# }) +# names(y_percent_1) <- vars + +# mt_number_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% MT_chromosome_genes$gene_id)) +# }) +# names(mt_number_1) <- vars + +# mt_percent_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% MT_chromosome_genes$gene_id))/length( MT_chromosome_genes$gene_id) +# }) +# names(mt_percent_1) <- vars + +# rb_number_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% RbGeneList$ENSG)) +# }) +# names(rb_number_1) <- vars + +# rb_percent_1 <- lapply(vars, function(group){ +# genes <- icc_dt[grp == group][rev(order(percent_round))][percent > 1]$gene +# length(which(genes %in% RbGeneList$ENSG))/length(RbGeneList$ENSG) +# }) +# names(rb_percent_1) <- vars + + +### Pathway analysis ### +geneList <- lapply(genes_list, function(x){ + tmp <- bitr(x, fromType = "ENSEMBL", + toType = c("ENTREZID"), + OrgDb = org.Hs.eg.db)$ENTREZID + tmp[!is.na(tmp)] +}) + + +gg <- list() +kk <- list() + + + +df = as.data.frame(org.Hs.egGO) +go_gene_list = unique(sort(df$gene_id)) + +dfk = as.data.frame(org.Hs.egPATH) +kegg_gene_list = unique(sort(dfk$gene_id)) + + + +for (group in c("Line", "Village", "Cryopreserved", "Replicate","Line:Village", "Line:Cryopreserved", "Village:Cryopreserved", "Replicate:Village", "Replicate:Line", "Replicate:Cryopreserved", "Residual")){ + kk[[group]] <- enrichKEGG(gene = geneList[[group]], + universe = geneList[[group]], + organism = 'hsa', + pvalueCutoff = 0.05, + keyType = 'ncbi-geneid') + + gg[[group]] <- groupGO(gene = geneList[[group]], + OrgDb = org.Hs.eg.db, + readable = TRUE) + +} + + +hsGO <- godata('org.Hs.eg.db', ont="MF") + + +sim_results <- list() + +vars <- c("Line", "Village", "Cryopreserved", "Replicate","Village:Line", "Line:Cryopreserved", "Village:Cryopreserved", "Replicate:Village", "Replicate:Line", "Replicate:Cryopreserved") + +for (group1 in vars){ + print(group1) + for (group2 in vars[(grep(paste0("^",group1, "$"), vars) + 1): length(vars)]){ + print(group2) + sim_results[[group1]][[group2]] <- clusterSim(geneList[[group1]], geneList[[group2]], semData=hsGO, measure="Wang", combine="BMA") + } +} + + + + + +# genes2rerun <- c(character()) + +# for (g in unique(icc_dt$gene)){ +# print(g) +# genes2rerun <- c(genes2rerun, as.character(unique(icc_dt[gene == g][P > 0.05/(nrow(icc_dt[gene == g])-1)]$gene))) +# } + + +# for (gene in genes2rerun){ +# print(gene) +# # unlink(paste0(icc_dir,gene,"_icc.rds")) +# print(file.exists(paste0(icc_dir,gene,"_icc.rds"))) +# unlink(paste0("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/",gene,"_fitted_models.rds")) +# unlink(paste0("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/residuals4qtl/",gene,"_residuals4qtl.rds")) +# } + + diff --git a/Variance/post_review_cryo2/variance_partition_post_review_cryo.R b/Variance/post_review_cryo2/variance_partition_post_review_cryo.R new file mode 100644 index 0000000..d169289 --- /dev/null +++ b/Variance/post_review_cryo2/variance_partition_post_review_cryo.R @@ -0,0 +1,374 @@ +library(haven) +library(ggplot2) +library(glmmTMB) +library(Seurat) +library(tidyverse) +library(specr) +library(data.table) +library(dsLib) +library(pkgcond) +library(texreg) + + +inicio("Starting Analysis") + + +##### Define functions ##### +icc_glmmtmb <- function(model, percent = TRUE) { + tmp <- VarCorr(model) + var <- do.call(rbind, lapply(names(tmp$cond), function(x) data.table("grp" = x, "vcov" = attr(tmp$cond[[x]], "stddev")^2))) + var <- rbind(var, data.table("grp" = "Residual", "vcov" = sigma(model)^2)) + sum_var <- sum(var$vcov) + var <- var %>% dplyr::mutate(icc = vcov/sum_var) + if (isTRUE(percent)) { + var <- var %>% dplyr::mutate(percent = .data$icc * 100) + } + return(var) +} + + + +##### Bring in variables ##### +### Bring in arguments +args <- commandArgs(trailingOnly = TRUE) +icc_interaction_outdir <- paste0(args[1]) +icc_outdir <- paste0(args[2]) +model_interaction_outdir <- paste0(args[3]) +model_outdir <- paste0(args[4]) +resid_outdir <- paste0(args[5]) +gene <- as.character(args[6]) + +print(icc_outdir) +print(icc_outdir) +print(model_outdir) +print(resid_outdir) +print(gene) + + + +##### Read in seurat with genes ##### +seurat <- readRDS("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo/seurat_integrated_Sydney_1pct_expressing.rds") + + + +### Make DF for modeling ### +df_hier_unscale <- data.frame("Expression" = seurat[["SCT"]]@scale.data[gene,], "Village" = as.factor(ifelse(seurat@meta.data$Time == "Baseline", 0, 1)), "Line" = seurat@meta.data$Final_Assignment, "Replicate" = as.factor(gsub("[A-Z][a-z]+", "", seurat@meta.data$MULTI_ID)), "Cryopreserved" = seurat$Cryopreserved) +colnames(df_hier_unscale)[1] <- "Expression" + + + +##### Leave one out method ##### +variables <- c("Line", "Village", "Cryopreserved", "Replicate") + +model_all <- as.formula(paste0("Expression ~ (1|", paste0(variables, collapse = ") + (1|"), ")")) + + +boolFalse<-F +while(boolFalse==F & length(variables) > 0){ + tryCatch({ + print(variables) + model_glmmtmb <- suppress_warnings(glmmTMB(formula = noquote(model_all), data = df_hier_unscale, REML = TRUE), "giveCsparse") + boolFalse<-T + },error=function(e){ + if (length(variables) > 1){ + variables <- variables[1:(length(variables) -1)] + } else { + variables <- c() + } + }) +} + + +if (!length(variables) == 0){ + + +### Deal with singular fits by removing last variable until a fit can be found - ordered in variables buy importance +while (!model_glmmtmb$sdr$pdHess & length(variables) > 0 ){ + print("Singular fit: removing last variable and rerunning with one less covariate.") + if (length(variables) > 1){ + variables <- variables[1:(length(variables) -1)] + print(variables) + model_all <- as.formula(paste0("Expression ~ (1|", paste0(variables, collapse = ") + (1|"), ")")) + model_glmmtmb <- suppress_warnings(glmmTMB(formula = noquote(model_all), data = df_hier_unscale, REML = TRUE), "giveCsparse") + } else { + variables <- c() + } +} + +print(variables) + +if (length(variables) > 0){ + + model_loo <- list() + + icc <- data.table(grp = variables, P = as.numeric(NA)) + + for (variable in variables){ + print(variable) + if (length(variables) > 1){ + model <- as.formula(paste0("Expression ~ (1|", paste0(variables[!variables %in% variable], collapse = ") + (1|"), ")")) + } else { + model <- as.formula(paste0("Expression ~ 1")) + } + model_loo[[variable]] <- suppress_warnings(glmmTMB(formula = noquote(model), data = df_hier_unscale, REML = TRUE), "giveCsparse") + icc[grp == variable]$P <- anova(model_loo[[variable]], model_glmmtmb)$`Pr(>Chisq)`[2] + } + + + if (!(any(icc[grp != "Residual"]$P > 0.05/length(variables)) | any(is.na(icc[grp != "Residual"]$P)))){ + model_loo_updated <- model_loo + + updated_model <- as.formula(paste0("Expression ~ 1 + (1|", paste0(variables, collapse = ") + (1|"), ")")) + + model_loo_updated[["all"]] <- suppress_warnings(glmmTMB(formula = noquote(updated_model), data = df_hier_unscale, REML = TRUE), "giveCsparse") + + ### Calculate the variance explained by each of the included variables ### + icc <- icc_glmmtmb(model_loo_updated[["all"]]) + + + ### Recalculate significance ### + icc$P <- as.numeric(NA) + icc$gene <- gene + + for (variable in variables){ + print(variable) + if (length(variables) > 1){ + model <- as.formula(paste0("Expression ~ 1 + (1|", paste0(variables[!variables %in% variable], collapse = ") + (1|"), ")")) + } else { + model <- as.formula(paste0("Expression ~ 1")) + } + model_loo_updated[[variable]] <- suppress_warnings(glmmTMB(formula = noquote(model), data = df_hier_unscale, REML = TRUE), "giveCsparse") + icc[grp == variable]$P <- anova(model_loo_updated[[variable]], model_loo_updated[["all"]])$`Pr(>Chisq)`[2] + } + } + + + while((any(icc[grp != "Residual"]$P > 0.05/length(variables)) | any(is.na(icc[grp != "Residual"]$P)))){ + + print("Removing non-significant vartiables and retesting signficance") + + ##### Identify variables to keep ##### + variables <- icc[P < 0.05/length(variables)]$grp + + if (length(variables) > 0){ + + ##### Calculate full model ##### + updated_model <- as.formula(paste0("Expression ~ 1 + (1|", paste0(variables, collapse = ") + (1|"), ")")) + + + model_loo_updated <- list() + model_loo_updated[["all"]] <- suppress_warnings(glmmTMB(formula = noquote(updated_model), data = df_hier_unscale, REML = TRUE), "giveCsparse") + + + + ### Calculate the variance explained by each of the included variables ### + icc <- icc_glmmtmb(model_loo_updated[["all"]]) + + + + ### Recalfulate significance ### + icc$P <- as.numeric(NA) + icc$gene <- gene + + for (variable in variables){ + print(variable) + if (length(variables) > 1){ + model <- as.formula(paste0("Expression ~ 1 + (1|", paste0(variables[!variables %in% variable], collapse = ") + (1|"), ")")) + } else { + model <- as.formula(paste0("Expression ~ 1")) + } + model_loo_updated[[variable]] <- suppress_warnings(glmmTMB(formula = noquote(model), data = df_hier_unscale, REML = TRUE), "giveCsparse") + icc[grp == variable]$P <- anova(model_loo_updated[[variable]], model_loo_updated[["all"]])$`Pr(>Chisq)`[2] + } + + + + } else { + icc <- data.table(grp=character(), vcov=numeric(), icc=numeric(), percent=numeric(), P=numeric(), gene=character()) + model_loo_updated <- list() + } + } + + interaction_variables <- c() + + if (length(variables) > 1){ + ### Add in interactions of the significant variables + if ("Line" %in% variables & "Village" %in% variables){ + interaction_variables <- c(interaction_variables, "Line:Village") + } + if ("Line" %in% variables & "Cryopreserved" %in% variables){ + interaction_variables <- c(interaction_variables, "Line:Cryopreserved") + } + if ("Village" %in% variables & "Cryopreserved" %in% variables){ + interaction_variables <- c(interaction_variables, "Village:Cryopreserved") + } + if ("Replicate" %in% variables & "Village" %in% variables){ + interaction_variables <- c(interaction_variables, "Replicate:Village") + } + if ("Replicate" %in% variables & "Line" %in% variables){ + interaction_variables <- c(interaction_variables, "Replicate:Line") + } + if ("Replicate" %in% variables & "Cryopreserved" %in% variables){ + interaction_variables <- c(interaction_variables, "Replicate:Cryopreserved") + } + + + model_all_interaction <- as.formula(paste0("Expression ~ (1|", paste0(c(variables, interaction_variables), collapse = ") + (1|"), ")")) + + + boolFalse<-F + while(boolFalse==F & length(interaction_variables) > 0){ + tryCatch({ + print(c(variables, interaction_variables)) + model_glmmtmb_interaction <- suppress_warnings(glmmTMB(formula = noquote(model_all_interaction), data = df_hier_unscale, REML = TRUE), "giveCsparse") + boolFalse<-T + },error=function(e){ + if (length(interaction_variables) > 1){ + interaction_variables <- interaction_variables[1:(length(interaction_variables) -1)] + } else { + interaction_variables <- c() + } + }) + } + + ### Deal with singular fits by removing last variable until a fit can be found - ordered in variables buy importance + while (!model_glmmtmb_interaction$sdr$pdHess & length(interaction_variables) > 0 ){ + print("Singular fit: removing last variable and rerunning with one less covariate.") + if (length(interaction_variables) > 1){ + interaction_variables <- interaction_variables[1:(length(interaction_variables) -1)] + print(c(interaction_variables, variables)) + model_all_interaction <- as.formula(paste0("Expression ~ (1|", paste0(c(variables, interaction_variables), collapse = ") + (1|"), ")")) + model_glmmtmb_interaction <- suppress_warnings(glmmTMB(formula = noquote(model_all_interaction), data = df_hier_unscale, REML = TRUE), "giveCsparse") + } else { + interaction_variables <- c() + } + } + + if (length(interaction_variables) > 0){ + + model_loo_interaction <- list() + + icc_interaction <- data.table(grp = interaction_variables, P = as.numeric(NA)) + + for (variable in c(interaction_variables)){ + print(variable) + if (length(interaction_variables) > 1){ + model_interaction <- as.formula(paste0("Expression ~ (1|", paste0(c(variables, interaction_variables)[!c(variables, interaction_variables) %in% variable], collapse = ") + (1|"), ")")) + } else { + model_interaction <- as.formula(paste0("Expression ~ (1|", paste0(variables[!variables %in% variable], collapse = ") + (1|"), ")")) + } + model_loo_interaction[[variable]] <- suppress_warnings(glmmTMB(formula = noquote(model_interaction), data = df_hier_unscale, REML = TRUE), "giveCsparse") + icc_interaction[grp == variable]$P <- anova(model_loo_interaction[[variable]], model_glmmtmb_interaction)$`Pr(>Chisq)`[2] + } + + + if (!(any(icc_interaction[grp != "Residual"]$P > 0.05/length(c(variables, interaction_variables))) | any(is.na(icc_interaction[grp != "Residual"]$P)))){ + model_loo_interaction_updated <- model_loo_interaction + + updated_model_interaction <- as.formula(paste0("Expression ~ 1 + (1|", paste0(c(variables, interaction_variables), collapse = ") + (1|"), ")")) + + model_loo_interaction_updated[["all"]] <- suppress_warnings(glmmTMB(formula = noquote(updated_model_interaction), data = df_hier_unscale, REML = TRUE), "giveCsparse") + + ### Calculate the variance explained by each of the included variables ### + icc_interaction <- icc_glmmtmb(model_loo_interaction_updated[["all"]]) + + + ### Recalculate significance ### + icc_interaction$P <- as.numeric(NA) + icc_interaction$gene <- gene + + for (variable in c(variables, interaction_variables)){ + print(variable) + if (length(c(interaction_variables)) > 1){ + model <- as.formula(paste0("Expression ~ 1 + (1|", paste0(c(variables, interaction_variables)[!c(variables, interaction_variables) %in% variable], collapse = ") + (1|"), ")")) + } else { + model <- as.formula(paste0("Expression ~ (1|", paste0(variables[!variables %in% variable], collapse = ") + (1|"), ")")) + } + model_loo_interaction_updated[[variable]] <- suppress_warnings(glmmTMB(formula = noquote(model), data = df_hier_unscale, REML = TRUE), "giveCsparse") + icc_interaction[grp == variable]$P <- anova(model_loo_interaction_updated[[variable]], model_loo_interaction_updated[["all"]])$`Pr(>Chisq)`[2] + } + } + + + while((any(icc_interaction[!(grp %in% c("Residual", variables))]$P > 0.05/length(c(variables, interaction_variables))) | any(is.na(icc_interaction[!(grp %in%c("Residual", variables))]$P)))){ + + print("Removing non-significant vartiables and retesting signficance") + + ##### Identify variables to keep ##### + interaction_variables <- icc_interaction[!(grp %in% c("Residual", variables)) & P < 0.05/length(c(variables, interaction_variables))]$grp + + if (length(interaction_variables) > 0){ + + ##### Calculate full model ##### + updated_model_interaction <- as.formula(paste0("Expression ~ 1 + (1|", paste0(c(variables, interaction_variables), collapse = ") + (1|"), ")")) + + + model_loo_interaction_updated <- list() + model_loo_interaction_updated[["all"]] <- suppress_warnings(glmmTMB(formula = noquote(updated_model_interaction), data = df_hier_unscale, REML = TRUE), "giveCsparse") + + + + ### Calculate the variance explained by each of the included variables ### + icc_interaction <- icc_glmmtmb(model_loo_interaction_updated[["all"]]) + + + + ### Recalfulate significance ### + icc_interaction$P <- as.numeric(NA) + icc_interaction$gene <- gene + + for (variable in c(variables, interaction_variables)){ + print(variable) + model_interaction <- as.formula(paste0("Expression ~ 1 + (1|", paste0(c(variables, interaction_variables)[!(c(variables, interaction_variables) %in% variable)], collapse = ") + (1|"), ")")) + model_loo_interaction_updated[[variable]] <- suppress_warnings(glmmTMB(formula = noquote(model_interaction), data = df_hier_unscale, REML = TRUE), "giveCsparse") + icc_interaction[grp == variable]$P <- anova(model_loo_interaction_updated[[variable]], model_loo_interaction_updated[["all"]])$`Pr(>Chisq)`[2] + } + } else { + icc_interaction <- data.table(grp=character(), vcov=numeric(), icc=numeric(), percent=numeric(), P=numeric(), gene=character()) + model_loo_interaction_updated <- list() + } + + if (nrow(icc_interaction) > nrow(icc)){ + saveRDS(icc_interaction, paste0(icc_interaction_outdir, gene, "_icc.rds"), compress = TRUE) + saveRDS(model_loo_interaction_updated, paste0(model_interaction_outdir, gene, "_fitted_models.rds"), compress = TRUE) + } + } + } else { + icc_interaction <- data.table(grp=character(), vcov=numeric(), icc=numeric(), percent=numeric(), P=numeric(), gene=character()) + model_loo_interaction_updated <- list() + } + + + ### If line is significant, then get residuals for downstream qtl checks ### + if ("Line" %in% variables){ + print("Making residuals for qtl detection") + if (length(variables) > 1){ + if (length(interaction_variables) > 0){ + model_no_line <- as.formula(paste0("Expression ~ (1|", paste0(c(variables, interaction_variables)[-grep("Line", c(variables, interaction_variables))], collapse = ") + (1|"), ")")) + } else { + model_no_line <- as.formula(paste0("Expression ~ (1|", paste0(variables[!variables %in% "Line"], collapse = ") + (1|"), ")")) + } + } else { + model_no_line <- as.formula(paste0("Expression ~ 1")) + } + fit_no_line <- glmmTMB(formula = noquote(model_no_line), data = df_hier_unscale, REML = TRUE) + residuals <- resid(fit_no_line) + saveRDS(residuals, paste0(resid_outdir, gene, "_residuals4qtl.rds"), compress = TRUE) + } + + } else { + icc <- data.table(grp=character(), vcov=numeric(), icc=numeric(), percent=numeric(), P=numeric(), gene=character()) + model_loo_updated <- list() + } + } else { + icc <- data.table(grp=character(), vcov=numeric(), icc=numeric(), percent=numeric(), P=numeric(), gene=character()) + model_loo_updated <- list() + } +} + + +saveRDS(icc, paste0(icc_outdir, gene, "_icc.rds"), compress = TRUE) +saveRDS(model_loo_updated, paste0(model_outdir, gene, "_fitted_models.rds"), compress = TRUE) + + +fin() \ No newline at end of file diff --git a/Variance/post_review_cryo2/variance_partition_post_review_cryo.smk b/Variance/post_review_cryo2/variance_partition_post_review_cryo.smk new file mode 100644 index 0000000..07dcad4 --- /dev/null +++ b/Variance/post_review_cryo2/variance_partition_post_review_cryo.smk @@ -0,0 +1,39 @@ +import pandas as pd + + +genes_file = "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo/seurat_integrated_Sydney_1pct_expressing_genes.tsv" +genes = pd.read_csv(genes_file, sep = "\t") + + +rule all: + input: + expand("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/{gene}_fitted_models.rds", gene = genes.Gene) + + +rule partition_variance: + input: + seurat = "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Distribution_tests/seurat_integrated_all_times_clustered_1pct_expressing.rds" + output: + "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/{gene}_icc.rds", + "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/{gene}_fitted_models.rds" + resources: + mem_per_thread_gb = lambda wildcards, attempt: attempt * 16, + disk_per_thread_gb = lambda wildcards, attempt: attempt * 16 + threads: 4 + params: + script = "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/scripts/Variance/post_review_cryo2/variance_partition_post_review_cryo.R", + out_icc="/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc/", + out_model="/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/fit_models/", + out_resids="/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/residuals4qtl/", + out_icc_interaction = "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc_interaction/", + out_model_interaction = "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/icc_interaction/" + log: + shell: + """ + mkdir -p {params.out_icc_interaction} + mkdir -p {params.out_model_interaction} + mkdir -p {params.out_resids} + + /directflow/SCCGGroupShare/projects/DrewNeavin/software/anaconda3/envs/baseR402/bin/Rscript {params.script} {params.out_icc_interaction} {params.out_icc} {params.out_model_interaction} {params.out_model} {params.out_resids} {wildcards.gene} + """ + \ No newline at end of file diff --git a/Variance/post_review_cryo2/variance_partition_post_review_snake_cryo.sh b/Variance/post_review_cryo2/variance_partition_post_review_snake_cryo.sh new file mode 100644 index 0000000..9fb4aba --- /dev/null +++ b/Variance/post_review_cryo2/variance_partition_post_review_snake_cryo.sh @@ -0,0 +1,134 @@ + +SNAKEFILE="/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/scripts/Variance/post_review_cryo2/variance_partition_post_review_cryo.smk" +LOG="/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review_cryo2/gene_separated/logs/" + +mkdir -p $LOG + +snakemake \ + --snakefile $SNAKEFILE \ + --dryrun \ + --cores 1 \ + --quiet \ + --unlock + + +snakemake \ + --snakefile $SNAKEFILE \ + --dryrun \ + --cores 1 \ + --reason > jobs2run.txt + + + +nohup \ + snakemake \ + --snakefile $SNAKEFILE \ + --jobs 200 \ + --use-singularity \ + --restart-times 1 \ + --keep-going \ + --cluster \ + "qsub -S /bin/bash \ + -q short.q \ + -r yes \ + -pe smp {threads} \ + -l tmp_requested={resources.disk_per_thread_gb}G \ + -l mem_requested={resources.mem_per_thread_gb}G \ + -e $LOG \ + -o $LOG \ + -j y \ + -V" \ + > $LOG/nohup_`date +%Y-%m-%d.%H:%M:%S`.log & + + +snakemake \ + --snakefile $SNAKEFILE \ + --dryrun \ + --cores 1 \ + --quiet \ + --unlock + + +snakemake \ + --snakefile $SNAKEFILE \ + --dryrun \ + --cores 1 \ + --quiet \ + --cleanup-metadata \ + /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000116001_icc.rds \ + /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000116001_fitted_models.rds \ + /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000084112_icc.rds \ + /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000084112_fitted_models.rds \ + /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000130706_icc.rds \ + /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000130706_fitted_models.rds + + + +rm ENSG00000047617_icc.rds +rm ENSG00000089250_icc.rds +rm ENSG00000124602_icc.rds +rm ENSG00000130052_icc.rds +rm ENSG00000136099_icc.rds +rm ENSG00000143412_icc.rds +rm ENSG00000147124_icc.rds +rm ENSG00000158104_icc.rds +rm ENSG00000160188_icc.rds +rm ENSG00000163393_icc.rds +rm ENSG00000163947_icc.rds +rm ENSG00000167083_icc.rds +rm ENSG00000170113_icc.rds +rm ENSG00000170961_icc.rds +rm ENSG00000172748_icc.rds +rm ENSG00000184916_icc.rds +rm ENSG00000185386_icc.rds +rm ENSG00000186141_icc.rds +rm ENSG00000188536_icc.rds +rm ENSG00000189164_icc.rds +rm ENSG00000230606_icc.rds +rm ENSG00000242687_icc.rds +rm ENSG00000243444_icc.rds +rm ENSG00000253438_icc.rds +rm ENSG00000253731_icc.rds +rm ENSG00000258813_icc.rds +rm ENSG00000258944_icc.rds +rm ENSG00000260528_icc.rds +rm ENSG00000272030_icc.rds +rm ENSG00000272973_icc.rds +rm ENSG00000274367_icc.rds +rm ENSG00000275580_icc.rds + + + + +rm ENSG00000047617_fitted_models.rds +rm ENSG00000089250_fitted_models.rds +rm ENSG00000124602_fitted_models.rds +rm ENSG00000130052_fitted_models.rds +rm ENSG00000136099_fitted_models.rds +rm ENSG00000143412_fitted_models.rds +rm ENSG00000147124_fitted_models.rds +rm ENSG00000158104_fitted_models.rds +rm ENSG00000160188_fitted_models.rds +rm ENSG00000163393_fitted_models.rds +rm ENSG00000163947_fitted_models.rds +rm ENSG00000167083_fitted_models.rds +rm ENSG00000170113_fitted_models.rds +rm ENSG00000170961_fitted_models.rds +rm ENSG00000172748_fitted_models.rds +rm ENSG00000184916_fitted_models.rds +rm ENSG00000185386_fitted_models.rds +rm ENSG00000186141_fitted_models.rds +rm ENSG00000188536_fitted_models.rds +rm ENSG00000189164_fitted_models.rds +rm ENSG00000230606_fitted_models.rds +rm ENSG00000242687_fitted_models.rds +rm ENSG00000243444_fitted_models.rds +rm ENSG00000253438_fitted_models.rds +rm ENSG00000253731_fitted_models.rds +rm ENSG00000258813_fitted_models.rds +rm ENSG00000258944_fitted_models.rds +rm ENSG00000260528_fitted_models.rds +rm ENSG00000272030_fitted_models.rds +rm ENSG00000272973_fitted_models.rds +rm ENSG00000274367_fitted_models.rds +rm ENSG00000275580_fitted_models.rds diff --git a/Variance/rmv_residuals2fix.sh b/Variance/rmv_residuals2fix.sh new file mode 100644 index 0000000..5f74269 --- /dev/null +++ b/Variance/rmv_residuals2fix.sh @@ -0,0 +1,14 @@ +#!/bin/bash + +### Realized that called the wrong model and weren't really saving the correct model for qtl residuals +### Need to remove the files in icc and fit_models to force snakemake to rerun + +DIR=/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated + +for file in `ls $DIR/residuals4qtl` +do + base=`echo $file | sed 's/_residuals4qtl.rds//g'` + echo $base + rm $DIR/icc/$base\_icc.rds + rm $DIR/fit_models/$base\_fitted_models.rds +done \ No newline at end of file diff --git a/Variance/variance_partition_post_review.sh b/Variance/variance_partition_post_review.sh new file mode 100644 index 0000000..3a9d28e --- /dev/null +++ b/Variance/variance_partition_post_review.sh @@ -0,0 +1,7 @@ +#!/bin/bash + +eval "$(conda shell.bash hook)" +conda activate baseR402 + + +Rscript /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/scripts/Variance/variance_partition_post_review.R $OUT_ICC $OUT_MODEL $OUT_RESID $SGE_TASK_ID \ No newline at end of file diff --git a/eQTL_check/filter_snps.R b/eQTL_check/filter_snps.R new file mode 100644 index 0000000..da3b894 --- /dev/null +++ b/eQTL_check/filter_snps.R @@ -0,0 +1,83 @@ +library(vcfR) +library(data.table) +library(tidyverse) + + +##### Set up variables ##### +dir <- "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/" + + +iPSC_Village/scripts/QCmetric_figs +##### Read in data ##### +vcf <- read.vcfR(paste0(dir, "deboever_finalized_snps.recode.vcf")) +eqtls_overlap_dt <- fread(paste0(dir,"deboever_imputed_overlapping_filtered_header.bed"), sep = "\t") + +geno <- data.table(extract.gt(element = "GT",vcf, IDtoRowNames = F)) + + +if (!all(colSums(is.na(geno)) == nrow(geno))){ + message("Found GT genotype format in cluster vcf. Will use that metric for cluster correlation.") + format_clust = "GT" + + if (any(grepl("\\|",geno[,1]))){ + separator = "|" + message("Detected | separator for GT genotype format in cluster vcf") + } else if (any(grepl("/",geno[,1]))) { + separator = "/" + message("Detected / separator for GT genotype format in cluster vcf") + } else { + format_clust = NA + message("Can't identify a separator for the GT field in cluster vcf, moving on to using GP.") + } + if (!is.na(format_clust)){ + geno <- data.table(as_tibble(lapply(geno, function(x) {gsub(paste0("0\\",separator,"0"),0, x)}) %>% + lapply(., function(x) {gsub(paste0("0\\",separator,"1"),1, x)}) %>% + lapply(., function(x) {gsub(paste0("1\\",separator,"0"),1, x)}) %>% + lapply(., function(x) {gsub(paste0("1\\",separator,"1"),2, x)}))) + } +} + + +geno$ID <- vcf@fix[,'ID'] +geno$ID_ref_alt <- paste0(vcf@fix[,'CHROM'],":", vcf@fix[,'POS'],"_", vcf@fix[,'REF'],"_", vcf@fix[,'ALT']) + +eqtls_overlap_dt <- eqtls_overlap_dt[ID %in% unique(geno$ID)] +eqtls_overlap_dt$ID_ref_alt <- paste0(eqtls_overlap_dt$ID, "_", eqtls_overlap_dt$REF, "_", eqtls_overlap_dt$ALT) + + +temp <- list() + +for (gene in unique(eqtls_overlap_dt$gene_id)){ + print(gene) + temp[[gene]] <- eqtls_overlap_dt[gene_id == gene] + k = 1 + while (k < nrow(temp[[gene]])){ + test_snp <- temp[[gene]]$ID_ref_alt[k] + for (snp in temp[[gene]][(k+1):nrow(temp[[gene]]),]$ID_ref_alt){ + if (abs(cor(as.numeric(geno[ID_ref_alt == test_snp,1:3]), as.numeric(geno[ID_ref_alt == snp,1:3]))) == 1){ + temp[[gene]] <- temp[[gene]][ID_ref_alt != snp] + } + } + k = k + 1 + } +} + + +eqtls_overlap_dt_subset <- do.call(rbind, temp) +eqtls_overlap_dt_subset$gene_id <- gsub("\\..+", "", eqtls_overlap_dt_subset$gene_id) + + +resid_files <- list.files("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/residuals4qtl") +ensg_list <- unique(gsub("_residuals4qtl.rds", "", resid_files)) + +eqtls_overlap_dt_subset <- eqtls_overlap_dt_subset[gene_id %in% ensg_list] + + +fwrite(eqtls_overlap_dt_subset, paste0(dir, "deboever_imputed_overlapping_filtered_header_pruned.bed"), sep = "\t") + + +eqtls_overlap_dt_subset_gene_snp <- eqtls_overlap_dt_subset[,c("gene_id","ID_ref_alt")] + +fwrite(eqtls_overlap_dt_subset_gene_snp, paste0(dir, "deboever_imputed_overlapping_filtered_header_pruned_snp_gene.tsv"), sep = "\t") + + diff --git a/eQTL_check/genes2test.sh b/eQTL_check/genes2test.sh new file mode 100644 index 0000000..ae8464e --- /dev/null +++ b/eQTL_check/genes2test.sh @@ -0,0 +1,68 @@ +#!/bin/bash + +OUTDIR="/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap" + +kilpinen_genes="$OUTDIR/gene_snp_list.tsv" +deboever_genes="$OUTDIR/deboever_gene_snp_list.tsv" +variance_genes="/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/residuals4qtl" + + +ls $variance_genes | sed "s/_residuals4qtl.rds//g" | sort -u > $OUTDIR/residual_genes.tsv +awk '{print $2}' $kilpinen_genes | sort -u > $OUTDIR/kilpinen_genes.tsv +awk '{print $2}' $deboever_genes | sort -u > $OUTDIR/deboever_genes.tsv + + +comm -12 $OUTDIR/residual_genes.tsv $OUTDIR/kilpinen_genes.tsv > $OUTDIR/genes_residual_and_kilpinen.tsv +comm -12 $OUTDIR/residual_genes.tsv $OUTDIR/deboever_genes.tsv > $OUTDIR/genes_residual_and_deboever.tsv + + +### Get finalized list of genes that were eQTLs and demonstrate line effects +grep -F -f $OUTDIR/genes_residual_and_kilpinen.tsv $kilpinen_genes > $OUTDIR/finalized_gene_snp_list.tsv +grep -F -f $OUTDIR/genes_residual_and_deboever.tsv $deboever_genes > $OUTDIR/finalized_deboever_gene_snp_list.tsv + + + +### Filter vcf for just these snps ### +awk '{print $1}' $OUTDIR/finalized_gene_snp_list.tsv | sort -u > $OUTDIR/finalized_snps.tsv +awk '{print $1}' $OUTDIR/finalized_deboever_gene_snp_list.tsv | sort -u > $OUTDIR/finalized_deboever_snps.tsv + + +conda activate vcftools + + vcftools --vcf $OUTDIR/merged_imputed_AllChrs_iPSC_R2_0.3_filtered_diff_genotypes.vcf --snps $OUTDIR/finalized_snps.tsv --recode --recode-INFO-all --out $OUTDIR/finalized_snps + vcftools --vcf $OUTDIR/merged_imputed_AllChrs_iPSC_R2_0.3_filtered_diff_genotypes.vcf --snps $OUTDIR/finalized_deboever_snps.tsv --recode --recode-INFO-all --out $OUTDIR/deboever_finalized_snps + +conda deactivate + +# conda activate bcftools + +# bcftools +prune -l 0.9 -w 1000 $OUTDIR/deboever_finalized_snps.recode.vcf -Ov -o $OUTDIR/deboever_finalized_snps_pruned.vcf + +# conda deactivate + +### Get 1000G ref and alt allele annotations +vcf1000g="/directflow/SCCGGroupShare/projects/DrewNeavin/References/GRCh37SNPvcfs1000genomes/MergedAutosomesFilteredGenes.recode.MAF0.01.vcf" + +conda activate bcftools + + bgzip -c $OUTDIR/finalized_snps.recode.vcf > $OUTDIR/finalized_snps.recode.vcf.gz + tabix -p vcf $OUTDIR/finalized_snps.recode.vcf.gz + + bgzip -c $vcf1000g > $OUTDIR/MergedAutosomesFilteredGenes.recode.MAF0.01..1000g_hg19.vcf.gz + tabix -p vcf $OUTDIR/MergedAutosomesFilteredGenes.recode.MAF0.01..1000g_hg19.vcf.gz + + bcftools isec $OUTDIR/finalized_snps.recode.vcf.gz $OUTDIR/MergedAutosomesFilteredGenes.recode.MAF0.01..1000g_hg19.vcf.gz -o $OUTDIR/overlap_1000g.vcf.gz -O vz -p $OUTDIR + +conda deactivate + + + + + +conda activate bedtools + + dbsnp=/directflow/SCCGGroupShare/projects/DrewNeavin/References/dbSNP/hg19/hg19_avsnp150.txt.gz + + bedtools intersect -a $OUTDIR/kilpinen_imputed_overlapping.bed -b $dbsnp -loj > $OUTDIR/kilpinen_imputed_overlapping_dbsnp.bed + +conda deactivate \ No newline at end of file diff --git a/eQTL_check/jobs2run.txt b/eQTL_check/jobs2run.txt new file mode 100644 index 0000000..4896c7b --- /dev/null +++ b/eQTL_check/jobs2run.txt @@ -0,0 +1,2509 @@ +Building DAG of jobs... +Job counts: + count jobs + 1 all + 249 eqtl + 250 + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000196696_deboever_eQTL_results.bed + jobid: 2221 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000196696_deboever_eQTL_results.bed + wildcards: gene=ENSG00000196696 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000226025_deboever_eQTL_results.bed + jobid: 2449 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000226025_deboever_eQTL_results.bed + wildcards: gene=ENSG00000226025 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000269345_deboever_eQTL_results.bed + jobid: 2754 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000269345_deboever_eQTL_results.bed + wildcards: gene=ENSG00000269345 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000267640_deboever_eQTL_results.bed + jobid: 2737 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000267640_deboever_eQTL_results.bed + wildcards: gene=ENSG00000267640 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000116771_deboever_eQTL_results.bed + jobid: 654 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000116771_deboever_eQTL_results.bed + wildcards: gene=ENSG00000116771 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000267127_deboever_eQTL_results.bed + jobid: 2730 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000267127_deboever_eQTL_results.bed + wildcards: gene=ENSG00000267127 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000088756_deboever_eQTL_results.bed + jobid: 254 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000088756_deboever_eQTL_results.bed + wildcards: gene=ENSG00000088756 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000197870_deboever_eQTL_results.bed + jobid: 2258 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000197870_deboever_eQTL_results.bed + wildcards: gene=ENSG00000197870 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000155252_deboever_eQTL_results.bed + jobid: 1383 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000155252_deboever_eQTL_results.bed + wildcards: gene=ENSG00000155252 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000010327_deboever_eQTL_results.bed + jobid: 28 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000010327_deboever_eQTL_results.bed + wildcards: gene=ENSG00000010327 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000230325_deboever_eQTL_results.bed + jobid: 2485 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000230325_deboever_eQTL_results.bed + wildcards: gene=ENSG00000230325 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000262633_deboever_eQTL_results.bed + jobid: 2708 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000262633_deboever_eQTL_results.bed + wildcards: gene=ENSG00000262633 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000272947_deboever_eQTL_results.bed + jobid: 2788 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000272947_deboever_eQTL_results.bed + wildcards: gene=ENSG00000272947 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000224557_deboever_eQTL_results.bed + jobid: 2436 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000224557_deboever_eQTL_results.bed + wildcards: gene=ENSG00000224557 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000163879_deboever_eQTL_results.bed + jobid: 1542 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000163879_deboever_eQTL_results.bed + wildcards: gene=ENSG00000163879 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000247556_deboever_eQTL_results.bed + jobid: 2601 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000247556_deboever_eQTL_results.bed + wildcards: gene=ENSG00000247556 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000254860_deboever_eQTL_results.bed + jobid: 2653 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000254860_deboever_eQTL_results.bed + wildcards: gene=ENSG00000254860 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000239445_deboever_eQTL_results.bed + jobid: 2560 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000239445_deboever_eQTL_results.bed + wildcards: gene=ENSG00000239445 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000176244_deboever_eQTL_results.bed + jobid: 1891 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000176244_deboever_eQTL_results.bed + wildcards: gene=ENSG00000176244 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000112599_deboever_eQTL_results.bed + jobid: 588 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000112599_deboever_eQTL_results.bed + wildcards: gene=ENSG00000112599 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000158486_deboever_eQTL_results.bed + jobid: 1434 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000158486_deboever_eQTL_results.bed + wildcards: gene=ENSG00000158486 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000253966_deboever_eQTL_results.bed + jobid: 2640 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000253966_deboever_eQTL_results.bed + wildcards: gene=ENSG00000253966 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000267745_deboever_eQTL_results.bed + jobid: 2741 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000267745_deboever_eQTL_results.bed + wildcards: gene=ENSG00000267745 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000205047_deboever_eQTL_results.bed + jobid: 2362 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000205047_deboever_eQTL_results.bed + wildcards: gene=ENSG00000205047 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000120784_deboever_eQTL_results.bed + jobid: 723 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000120784_deboever_eQTL_results.bed + wildcards: gene=ENSG00000120784 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000214922_deboever_eQTL_results.bed + jobid: 2410 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000214922_deboever_eQTL_results.bed + wildcards: gene=ENSG00000214922 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000272234_deboever_eQTL_results.bed + jobid: 2782 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000272234_deboever_eQTL_results.bed + wildcards: gene=ENSG00000272234 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000249839_deboever_eQTL_results.bed + jobid: 2614 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000249839_deboever_eQTL_results.bed + wildcards: gene=ENSG00000249839 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000115525_deboever_eQTL_results.bed + jobid: 627 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000115525_deboever_eQTL_results.bed + wildcards: gene=ENSG00000115525 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000187922_deboever_eQTL_results.bed + jobid: 2159 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000187922_deboever_eQTL_results.bed + wildcards: gene=ENSG00000187922 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000267645_deboever_eQTL_results.bed + jobid: 2738 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000267645_deboever_eQTL_results.bed + wildcards: gene=ENSG00000267645 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000227370_deboever_eQTL_results.bed + jobid: 2466 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000227370_deboever_eQTL_results.bed + wildcards: gene=ENSG00000227370 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000243696_deboever_eQTL_results.bed + jobid: 2587 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000243696_deboever_eQTL_results.bed + wildcards: gene=ENSG00000243696 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000225345_deboever_eQTL_results.bed + jobid: 2443 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000225345_deboever_eQTL_results.bed + wildcards: gene=ENSG00000225345 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000120322_deboever_eQTL_results.bed + jobid: 717 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000120322_deboever_eQTL_results.bed + wildcards: gene=ENSG00000120322 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000206341_deboever_eQTL_results.bed + jobid: 2371 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000206341_deboever_eQTL_results.bed + wildcards: gene=ENSG00000206341 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000213689_deboever_eQTL_results.bed + jobid: 2391 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000213689_deboever_eQTL_results.bed + wildcards: gene=ENSG00000213689 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000250251_deboever_eQTL_results.bed + jobid: 2618 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000250251_deboever_eQTL_results.bed + wildcards: gene=ENSG00000250251 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000264070_deboever_eQTL_results.bed + jobid: 2719 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000264070_deboever_eQTL_results.bed + wildcards: gene=ENSG00000264070 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000271335_deboever_eQTL_results.bed + jobid: 2767 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000271335_deboever_eQTL_results.bed + wildcards: gene=ENSG00000271335 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000236624_deboever_eQTL_results.bed + jobid: 2538 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000236624_deboever_eQTL_results.bed + wildcards: gene=ENSG00000236624 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000184674_deboever_eQTL_results.bed + jobid: 2078 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000184674_deboever_eQTL_results.bed + wildcards: gene=ENSG00000184674 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000178201_deboever_eQTL_results.bed + jobid: 1940 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000178201_deboever_eQTL_results.bed + wildcards: gene=ENSG00000178201 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000168803_deboever_eQTL_results.bed + jobid: 1717 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000168803_deboever_eQTL_results.bed + wildcards: gene=ENSG00000168803 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000198502_deboever_eQTL_results.bed + jobid: 2286 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000198502_deboever_eQTL_results.bed + wildcards: gene=ENSG00000198502 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000227057_deboever_eQTL_results.bed + jobid: 2463 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000227057_deboever_eQTL_results.bed + wildcards: gene=ENSG00000227057 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000185596_deboever_eQTL_results.bed + jobid: 2114 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000185596_deboever_eQTL_results.bed + wildcards: gene=ENSG00000185596 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000182853_deboever_eQTL_results.bed + jobid: 2027 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000182853_deboever_eQTL_results.bed + wildcards: gene=ENSG00000182853 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000272010_deboever_eQTL_results.bed + jobid: 2774 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000272010_deboever_eQTL_results.bed + wildcards: gene=ENSG00000272010 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000228672_deboever_eQTL_results.bed + jobid: 2473 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000228672_deboever_eQTL_results.bed + wildcards: gene=ENSG00000228672 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000100197_deboever_eQTL_results.bed + jobid: 333 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000100197_deboever_eQTL_results.bed + wildcards: gene=ENSG00000100197 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000139187_deboever_eQTL_results.bed + jobid: 1098 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000139187_deboever_eQTL_results.bed + wildcards: gene=ENSG00000139187 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000231713_deboever_eQTL_results.bed + jobid: 2498 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000231713_deboever_eQTL_results.bed + wildcards: gene=ENSG00000231713 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000234327_deboever_eQTL_results.bed + jobid: 2520 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000234327_deboever_eQTL_results.bed + wildcards: gene=ENSG00000234327 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000213976_deboever_eQTL_results.bed + jobid: 2398 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000213976_deboever_eQTL_results.bed + wildcards: gene=ENSG00000213976 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000160695_deboever_eQTL_results.bed + jobid: 1478 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000160695_deboever_eQTL_results.bed + wildcards: gene=ENSG00000160695 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000099984_deboever_eQTL_results.bed + jobid: 318 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000099984_deboever_eQTL_results.bed + wildcards: gene=ENSG00000099984 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000154803_deboever_eQTL_results.bed + jobid: 1378 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000154803_deboever_eQTL_results.bed + wildcards: gene=ENSG00000154803 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000229164_deboever_eQTL_results.bed + jobid: 2479 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000229164_deboever_eQTL_results.bed + wildcards: gene=ENSG00000229164 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000163684_deboever_eQTL_results.bed + jobid: 1534 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000163684_deboever_eQTL_results.bed + wildcards: gene=ENSG00000163684 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000176681_deboever_eQTL_results.bed + jobid: 1906 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000176681_deboever_eQTL_results.bed + wildcards: gene=ENSG00000176681 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000169372_deboever_eQTL_results.bed + jobid: 1738 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000169372_deboever_eQTL_results.bed + wildcards: gene=ENSG00000169372 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000101638_deboever_eQTL_results.bed + jobid: 384 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000101638_deboever_eQTL_results.bed + wildcards: gene=ENSG00000101638 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000129071_deboever_eQTL_results.bed + jobid: 847 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000129071_deboever_eQTL_results.bed + wildcards: gene=ENSG00000129071 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000213433_deboever_eQTL_results.bed + jobid: 2386 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000213433_deboever_eQTL_results.bed + wildcards: gene=ENSG00000213433 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000233297_deboever_eQTL_results.bed + jobid: 2510 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000233297_deboever_eQTL_results.bed + wildcards: gene=ENSG00000233297 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000215447_deboever_eQTL_results.bed + jobid: 2416 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000215447_deboever_eQTL_results.bed + wildcards: gene=ENSG00000215447 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000268575_deboever_eQTL_results.bed + jobid: 2749 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000268575_deboever_eQTL_results.bed + wildcards: gene=ENSG00000268575 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000175175_deboever_eQTL_results.bed + jobid: 1868 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000175175_deboever_eQTL_results.bed + wildcards: gene=ENSG00000175175 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000055955_deboever_eQTL_results.bed + jobid: 117 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000055955_deboever_eQTL_results.bed + wildcards: gene=ENSG00000055955 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000212978_deboever_eQTL_results.bed + jobid: 2377 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000212978_deboever_eQTL_results.bed + wildcards: gene=ENSG00000212978 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000235192_deboever_eQTL_results.bed + jobid: 2528 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000235192_deboever_eQTL_results.bed + wildcards: gene=ENSG00000235192 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000245680_deboever_eQTL_results.bed + jobid: 2593 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000245680_deboever_eQTL_results.bed + wildcards: gene=ENSG00000245680 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000267102_deboever_eQTL_results.bed + jobid: 2729 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000267102_deboever_eQTL_results.bed + wildcards: gene=ENSG00000267102 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000268119_deboever_eQTL_results.bed + jobid: 2745 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000268119_deboever_eQTL_results.bed + wildcards: gene=ENSG00000268119 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000273449_deboever_eQTL_results.bed + jobid: 2796 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000273449_deboever_eQTL_results.bed + wildcards: gene=ENSG00000273449 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000225554_deboever_eQTL_results.bed + jobid: 2446 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000225554_deboever_eQTL_results.bed + wildcards: gene=ENSG00000225554 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000237310_deboever_eQTL_results.bed + jobid: 2542 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000237310_deboever_eQTL_results.bed + wildcards: gene=ENSG00000237310 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000228960_deboever_eQTL_results.bed + jobid: 2475 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000228960_deboever_eQTL_results.bed + wildcards: gene=ENSG00000228960 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000149262_deboever_eQTL_results.bed + jobid: 1298 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000149262_deboever_eQTL_results.bed + wildcards: gene=ENSG00000149262 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000272221_deboever_eQTL_results.bed + jobid: 2781 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000272221_deboever_eQTL_results.bed + wildcards: gene=ENSG00000272221 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000204967_deboever_eQTL_results.bed + jobid: 2361 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000204967_deboever_eQTL_results.bed + wildcards: gene=ENSG00000204967 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000271853_deboever_eQTL_results.bed + jobid: 2772 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000271853_deboever_eQTL_results.bed + wildcards: gene=ENSG00000271853 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000268869_deboever_eQTL_results.bed + jobid: 2751 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000268869_deboever_eQTL_results.bed + wildcards: gene=ENSG00000268869 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000239257_deboever_eQTL_results.bed + jobid: 2558 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000239257_deboever_eQTL_results.bed + wildcards: gene=ENSG00000239257 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000176593_deboever_eQTL_results.bed + jobid: 1903 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000176593_deboever_eQTL_results.bed + wildcards: gene=ENSG00000176593 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000250508_deboever_eQTL_results.bed + jobid: 2623 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000250508_deboever_eQTL_results.bed + wildcards: gene=ENSG00000250508 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000267648_deboever_eQTL_results.bed + jobid: 2739 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000267648_deboever_eQTL_results.bed + wildcards: gene=ENSG00000267648 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000240356_deboever_eQTL_results.bed + jobid: 2565 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000240356_deboever_eQTL_results.bed + wildcards: gene=ENSG00000240356 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000235994_deboever_eQTL_results.bed + jobid: 2531 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000235994_deboever_eQTL_results.bed + wildcards: gene=ENSG00000235994 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000273290_deboever_eQTL_results.bed + jobid: 2794 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000273290_deboever_eQTL_results.bed + wildcards: gene=ENSG00000273290 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000100298_deboever_eQTL_results.bed + jobid: 343 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000100298_deboever_eQTL_results.bed + wildcards: gene=ENSG00000100298 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000237624_deboever_eQTL_results.bed + jobid: 2546 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000237624_deboever_eQTL_results.bed + wildcards: gene=ENSG00000237624 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000198496_deboever_eQTL_results.bed + jobid: 2284 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000198496_deboever_eQTL_results.bed + wildcards: gene=ENSG00000198496 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000166529_deboever_eQTL_results.bed + jobid: 1644 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000166529_deboever_eQTL_results.bed + wildcards: gene=ENSG00000166529 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000173262_deboever_eQTL_results.bed + jobid: 1833 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000173262_deboever_eQTL_results.bed + wildcards: gene=ENSG00000173262 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000140199_deboever_eQTL_results.bed + jobid: 1121 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000140199_deboever_eQTL_results.bed + wildcards: gene=ENSG00000140199 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000176998_deboever_eQTL_results.bed + jobid: 1916 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000176998_deboever_eQTL_results.bed + wildcards: gene=ENSG00000176998 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000256225_deboever_eQTL_results.bed + jobid: 2665 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000256225_deboever_eQTL_results.bed + wildcards: gene=ENSG00000256225 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000230795_deboever_eQTL_results.bed + jobid: 2491 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000230795_deboever_eQTL_results.bed + wildcards: gene=ENSG00000230795 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000265579_deboever_eQTL_results.bed + jobid: 2724 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000265579_deboever_eQTL_results.bed + wildcards: gene=ENSG00000265579 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000214425_deboever_eQTL_results.bed + jobid: 2407 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000214425_deboever_eQTL_results.bed + wildcards: gene=ENSG00000214425 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000117242_deboever_eQTL_results.bed + jobid: 668 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000117242_deboever_eQTL_results.bed + wildcards: gene=ENSG00000117242 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000264538_deboever_eQTL_results.bed + jobid: 2723 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000264538_deboever_eQTL_results.bed + wildcards: gene=ENSG00000264538 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000173480_deboever_eQTL_results.bed + jobid: 1839 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000173480_deboever_eQTL_results.bed + wildcards: gene=ENSG00000173480 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000064651_deboever_eQTL_results.bed + jobid: 135 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000064651_deboever_eQTL_results.bed + wildcards: gene=ENSG00000064651 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000271452_deboever_eQTL_results.bed + jobid: 2769 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000271452_deboever_eQTL_results.bed + wildcards: gene=ENSG00000271452 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000213402_deboever_eQTL_results.bed + jobid: 2385 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000213402_deboever_eQTL_results.bed + wildcards: gene=ENSG00000213402 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000261061_deboever_eQTL_results.bed + jobid: 2695 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000261061_deboever_eQTL_results.bed + wildcards: gene=ENSG00000261061 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000135976_deboever_eQTL_results.bed + jobid: 999 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000135976_deboever_eQTL_results.bed + wildcards: gene=ENSG00000135976 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000183323_deboever_eQTL_results.bed + jobid: 2041 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000183323_deboever_eQTL_results.bed + wildcards: gene=ENSG00000183323 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000171084_deboever_eQTL_results.bed + jobid: 1781 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000171084_deboever_eQTL_results.bed + wildcards: gene=ENSG00000171084 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000271020_deboever_eQTL_results.bed + jobid: 2766 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000271020_deboever_eQTL_results.bed + wildcards: gene=ENSG00000271020 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000250529_deboever_eQTL_results.bed + jobid: 2625 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000250529_deboever_eQTL_results.bed + wildcards: gene=ENSG00000250529 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000257218_deboever_eQTL_results.bed + jobid: 2672 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000257218_deboever_eQTL_results.bed + wildcards: gene=ENSG00000257218 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000229150_deboever_eQTL_results.bed + jobid: 2477 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000229150_deboever_eQTL_results.bed + wildcards: gene=ENSG00000229150 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000065621_deboever_eQTL_results.bed + jobid: 146 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000065621_deboever_eQTL_results.bed + wildcards: gene=ENSG00000065621 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000269110_deboever_eQTL_results.bed + jobid: 2753 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000269110_deboever_eQTL_results.bed + wildcards: gene=ENSG00000269110 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000261625_deboever_eQTL_results.bed + jobid: 2702 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000261625_deboever_eQTL_results.bed + wildcards: gene=ENSG00000261625 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000181856_deboever_eQTL_results.bed + jobid: 1999 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000181856_deboever_eQTL_results.bed + wildcards: gene=ENSG00000181856 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000269973_deboever_eQTL_results.bed + jobid: 2759 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000269973_deboever_eQTL_results.bed + wildcards: gene=ENSG00000269973 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000106853_deboever_eQTL_results.bed + jobid: 494 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000106853_deboever_eQTL_results.bed + wildcards: gene=ENSG00000106853 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000213973_deboever_eQTL_results.bed + jobid: 2397 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000213973_deboever_eQTL_results.bed + wildcards: gene=ENSG00000213973 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000271643_deboever_eQTL_results.bed + jobid: 2770 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000271643_deboever_eQTL_results.bed + wildcards: gene=ENSG00000271643 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000264176_deboever_eQTL_results.bed + jobid: 2720 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000264176_deboever_eQTL_results.bed + wildcards: gene=ENSG00000264176 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000177873_deboever_eQTL_results.bed + jobid: 1935 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000177873_deboever_eQTL_results.bed + wildcards: gene=ENSG00000177873 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000161921_deboever_eQTL_results.bed + jobid: 1492 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000161921_deboever_eQTL_results.bed + wildcards: gene=ENSG00000161921 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000188707_deboever_eQTL_results.bed + jobid: 2174 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000188707_deboever_eQTL_results.bed + wildcards: gene=ENSG00000188707 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000189334_deboever_eQTL_results.bed + jobid: 2188 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000189334_deboever_eQTL_results.bed + wildcards: gene=ENSG00000189334 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000237669_deboever_eQTL_results.bed + jobid: 2548 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000237669_deboever_eQTL_results.bed + wildcards: gene=ENSG00000237669 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000261126_deboever_eQTL_results.bed + jobid: 2697 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000261126_deboever_eQTL_results.bed + wildcards: gene=ENSG00000261126 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000270696_deboever_eQTL_results.bed + jobid: 2765 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000270696_deboever_eQTL_results.bed + wildcards: gene=ENSG00000270696 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000261351_deboever_eQTL_results.bed + jobid: 2699 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000261351_deboever_eQTL_results.bed + wildcards: gene=ENSG00000261351 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000226686_deboever_eQTL_results.bed + jobid: 2457 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000226686_deboever_eQTL_results.bed + wildcards: gene=ENSG00000226686 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000241962_deboever_eQTL_results.bed + jobid: 2573 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000241962_deboever_eQTL_results.bed + wildcards: gene=ENSG00000241962 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000160323_deboever_eQTL_results.bed + jobid: 1473 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000160323_deboever_eQTL_results.bed + wildcards: gene=ENSG00000160323 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000204520_deboever_eQTL_results.bed + jobid: 2339 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000204520_deboever_eQTL_results.bed + wildcards: gene=ENSG00000204520 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000256604_deboever_eQTL_results.bed + jobid: 2668 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000256604_deboever_eQTL_results.bed + wildcards: gene=ENSG00000256604 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000257921_deboever_eQTL_results.bed + jobid: 2673 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000257921_deboever_eQTL_results.bed + wildcards: gene=ENSG00000257921 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000196597_deboever_eQTL_results.bed + jobid: 2216 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000196597_deboever_eQTL_results.bed + wildcards: gene=ENSG00000196597 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000100147_deboever_eQTL_results.bed + jobid: 331 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000100147_deboever_eQTL_results.bed + wildcards: gene=ENSG00000100147 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000262880_deboever_eQTL_results.bed + jobid: 2710 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000262880_deboever_eQTL_results.bed + wildcards: gene=ENSG00000262880 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000271369_deboever_eQTL_results.bed + jobid: 2768 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000271369_deboever_eQTL_results.bed + wildcards: gene=ENSG00000271369 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000260238_deboever_eQTL_results.bed + jobid: 2689 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000260238_deboever_eQTL_results.bed + wildcards: gene=ENSG00000260238 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000233527_deboever_eQTL_results.bed + jobid: 2514 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000233527_deboever_eQTL_results.bed + wildcards: gene=ENSG00000233527 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000268340_deboever_eQTL_results.bed + jobid: 2747 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000268340_deboever_eQTL_results.bed + wildcards: gene=ENSG00000268340 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000258636_deboever_eQTL_results.bed + jobid: 2679 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000258636_deboever_eQTL_results.bed + wildcards: gene=ENSG00000258636 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000170074_deboever_eQTL_results.bed + jobid: 1751 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000170074_deboever_eQTL_results.bed + wildcards: gene=ENSG00000170074 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000254876_deboever_eQTL_results.bed + jobid: 2654 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000254876_deboever_eQTL_results.bed + wildcards: gene=ENSG00000254876 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000182909_deboever_eQTL_results.bed + jobid: 2030 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000182909_deboever_eQTL_results.bed + wildcards: gene=ENSG00000182909 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000255104_deboever_eQTL_results.bed + jobid: 2657 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000255104_deboever_eQTL_results.bed + wildcards: gene=ENSG00000255104 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000179344_deboever_eQTL_results.bed + jobid: 1965 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000179344_deboever_eQTL_results.bed + wildcards: gene=ENSG00000179344 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000236397_deboever_eQTL_results.bed + jobid: 2534 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000236397_deboever_eQTL_results.bed + wildcards: gene=ENSG00000236397 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000267419_deboever_eQTL_results.bed + jobid: 2735 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000267419_deboever_eQTL_results.bed + wildcards: gene=ENSG00000267419 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000259758_deboever_eQTL_results.bed + jobid: 2685 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000259758_deboever_eQTL_results.bed + wildcards: gene=ENSG00000259758 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000169203_deboever_eQTL_results.bed + jobid: 1730 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000169203_deboever_eQTL_results.bed + wildcards: gene=ENSG00000169203 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000258704_deboever_eQTL_results.bed + jobid: 2680 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000258704_deboever_eQTL_results.bed + wildcards: gene=ENSG00000258704 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000230658_deboever_eQTL_results.bed + jobid: 2490 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000230658_deboever_eQTL_results.bed + wildcards: gene=ENSG00000230658 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000272787_deboever_eQTL_results.bed + jobid: 2787 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000272787_deboever_eQTL_results.bed + wildcards: gene=ENSG00000272787 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000119684_deboever_eQTL_results.bed + jobid: 705 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000119684_deboever_eQTL_results.bed + wildcards: gene=ENSG00000119684 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000180081_deboever_eQTL_results.bed + jobid: 1975 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000180081_deboever_eQTL_results.bed + wildcards: gene=ENSG00000180081 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000187372_deboever_eQTL_results.bed + jobid: 2147 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000187372_deboever_eQTL_results.bed + wildcards: gene=ENSG00000187372 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000231439_deboever_eQTL_results.bed + jobid: 2497 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000231439_deboever_eQTL_results.bed + wildcards: gene=ENSG00000231439 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000203403_deboever_eQTL_results.bed + jobid: 2311 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000203403_deboever_eQTL_results.bed + wildcards: gene=ENSG00000203403 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000151632_deboever_eQTL_results.bed + jobid: 1327 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000151632_deboever_eQTL_results.bed + wildcards: gene=ENSG00000151632 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000270346_deboever_eQTL_results.bed + jobid: 2762 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000270346_deboever_eQTL_results.bed + wildcards: gene=ENSG00000270346 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000196357_deboever_eQTL_results.bed + jobid: 2211 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000196357_deboever_eQTL_results.bed + wildcards: gene=ENSG00000196357 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000242252_deboever_eQTL_results.bed + jobid: 2577 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000242252_deboever_eQTL_results.bed + wildcards: gene=ENSG00000242252 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000254353_deboever_eQTL_results.bed + jobid: 2645 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000254353_deboever_eQTL_results.bed + wildcards: gene=ENSG00000254353 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000184227_deboever_eQTL_results.bed + jobid: 2068 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000184227_deboever_eQTL_results.bed + wildcards: gene=ENSG00000184227 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000144182_deboever_eQTL_results.bed + jobid: 1208 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000144182_deboever_eQTL_results.bed + wildcards: gene=ENSG00000144182 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000124370_deboever_eQTL_results.bed + jobid: 778 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000124370_deboever_eQTL_results.bed + wildcards: gene=ENSG00000124370 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000196700_deboever_eQTL_results.bed + jobid: 2222 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000196700_deboever_eQTL_results.bed + wildcards: gene=ENSG00000196700 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000272955_deboever_eQTL_results.bed + jobid: 2789 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000272955_deboever_eQTL_results.bed + wildcards: gene=ENSG00000272955 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000246985_deboever_eQTL_results.bed + jobid: 2599 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000246985_deboever_eQTL_results.bed + wildcards: gene=ENSG00000246985 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000271912_deboever_eQTL_results.bed + jobid: 2773 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000271912_deboever_eQTL_results.bed + wildcards: gene=ENSG00000271912 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000235231_deboever_eQTL_results.bed + jobid: 2529 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000235231_deboever_eQTL_results.bed + wildcards: gene=ENSG00000235231 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000169246_deboever_eQTL_results.bed + jobid: 1733 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000169246_deboever_eQTL_results.bed + wildcards: gene=ENSG00000169246 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000226381_deboever_eQTL_results.bed + jobid: 2453 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000226381_deboever_eQTL_results.bed + wildcards: gene=ENSG00000226381 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000268707_deboever_eQTL_results.bed + jobid: 2750 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000268707_deboever_eQTL_results.bed + wildcards: gene=ENSG00000268707 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000241170_deboever_eQTL_results.bed + jobid: 2569 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000241170_deboever_eQTL_results.bed + wildcards: gene=ENSG00000241170 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000186704_deboever_eQTL_results.bed + jobid: 2138 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000186704_deboever_eQTL_results.bed + wildcards: gene=ENSG00000186704 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000254634_deboever_eQTL_results.bed + jobid: 2650 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000254634_deboever_eQTL_results.bed + wildcards: gene=ENSG00000254634 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000125954_deboever_eQTL_results.bed + jobid: 811 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000125954_deboever_eQTL_results.bed + wildcards: gene=ENSG00000125954 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000226259_deboever_eQTL_results.bed + jobid: 2451 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000226259_deboever_eQTL_results.bed + wildcards: gene=ENSG00000226259 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000233327_deboever_eQTL_results.bed + jobid: 2511 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000233327_deboever_eQTL_results.bed + wildcards: gene=ENSG00000233327 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000197360_deboever_eQTL_results.bed + jobid: 2242 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000197360_deboever_eQTL_results.bed + wildcards: gene=ENSG00000197360 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000158062_deboever_eQTL_results.bed + jobid: 1423 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000158062_deboever_eQTL_results.bed + wildcards: gene=ENSG00000158062 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000234373_deboever_eQTL_results.bed + jobid: 2521 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000234373_deboever_eQTL_results.bed + wildcards: gene=ENSG00000234373 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000253333_deboever_eQTL_results.bed + jobid: 2634 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000253333_deboever_eQTL_results.bed + wildcards: gene=ENSG00000253333 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000196152_deboever_eQTL_results.bed + jobid: 2199 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000196152_deboever_eQTL_results.bed + wildcards: gene=ENSG00000196152 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000213225_deboever_eQTL_results.bed + jobid: 2382 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000213225_deboever_eQTL_results.bed + wildcards: gene=ENSG00000213225 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000164307_deboever_eQTL_results.bed + jobid: 1569 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000164307_deboever_eQTL_results.bed + wildcards: gene=ENSG00000164307 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000204934_deboever_eQTL_results.bed + jobid: 2359 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000204934_deboever_eQTL_results.bed + wildcards: gene=ENSG00000204934 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000223760_deboever_eQTL_results.bed + jobid: 2430 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000223760_deboever_eQTL_results.bed + wildcards: gene=ENSG00000223760 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000143126_deboever_eQTL_results.bed + jobid: 1181 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000143126_deboever_eQTL_results.bed + wildcards: gene=ENSG00000143126 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000167363_deboever_eQTL_results.bed + jobid: 1665 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000167363_deboever_eQTL_results.bed + wildcards: gene=ENSG00000167363 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000237943_deboever_eQTL_results.bed + jobid: 2552 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000237943_deboever_eQTL_results.bed + wildcards: gene=ENSG00000237943 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000260432_deboever_eQTL_results.bed + jobid: 2692 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000260432_deboever_eQTL_results.bed + wildcards: gene=ENSG00000260432 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000263603_deboever_eQTL_results.bed + jobid: 2716 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000263603_deboever_eQTL_results.bed + wildcards: gene=ENSG00000263603 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000267681_deboever_eQTL_results.bed + jobid: 2740 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000267681_deboever_eQTL_results.bed + wildcards: gene=ENSG00000267681 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000171823_deboever_eQTL_results.bed + jobid: 1799 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000171823_deboever_eQTL_results.bed + wildcards: gene=ENSG00000171823 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000104725_deboever_eQTL_results.bed + jobid: 434 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000104725_deboever_eQTL_results.bed + wildcards: gene=ENSG00000104725 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000214719_deboever_eQTL_results.bed + jobid: 2409 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000214719_deboever_eQTL_results.bed + wildcards: gene=ENSG00000214719 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000230439_deboever_eQTL_results.bed + jobid: 2486 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000230439_deboever_eQTL_results.bed + wildcards: gene=ENSG00000230439 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000107897_deboever_eQTL_results.bed + jobid: 509 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000107897_deboever_eQTL_results.bed + wildcards: gene=ENSG00000107897 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000196116_deboever_eQTL_results.bed + jobid: 2196 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000196116_deboever_eQTL_results.bed + wildcards: gene=ENSG00000196116 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000177082_deboever_eQTL_results.bed + jobid: 1919 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000177082_deboever_eQTL_results.bed + wildcards: gene=ENSG00000177082 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000267890_deboever_eQTL_results.bed + jobid: 2744 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000267890_deboever_eQTL_results.bed + wildcards: gene=ENSG00000267890 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000188283_deboever_eQTL_results.bed + jobid: 2166 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000188283_deboever_eQTL_results.bed + wildcards: gene=ENSG00000188283 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000230313_deboever_eQTL_results.bed + jobid: 2484 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000230313_deboever_eQTL_results.bed + wildcards: gene=ENSG00000230313 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000215256_deboever_eQTL_results.bed + jobid: 2414 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000215256_deboever_eQTL_results.bed + wildcards: gene=ENSG00000215256 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000088881_deboever_eQTL_results.bed + jobid: 258 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000088881_deboever_eQTL_results.bed + wildcards: gene=ENSG00000088881 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000165476_deboever_eQTL_results.bed + jobid: 1609 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000165476_deboever_eQTL_results.bed + wildcards: gene=ENSG00000165476 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000239335_deboever_eQTL_results.bed + jobid: 2559 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000239335_deboever_eQTL_results.bed + wildcards: gene=ENSG00000239335 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000250709_deboever_eQTL_results.bed + jobid: 2627 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000250709_deboever_eQTL_results.bed + wildcards: gene=ENSG00000250709 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000261015_deboever_eQTL_results.bed + jobid: 2694 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000261015_deboever_eQTL_results.bed + wildcards: gene=ENSG00000261015 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000198156_deboever_eQTL_results.bed + jobid: 2271 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000198156_deboever_eQTL_results.bed + wildcards: gene=ENSG00000198156 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000138674_deboever_eQTL_results.bed + jobid: 1086 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000138674_deboever_eQTL_results.bed + wildcards: gene=ENSG00000138674 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000184669_deboever_eQTL_results.bed + jobid: 2077 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000184669_deboever_eQTL_results.bed + wildcards: gene=ENSG00000184669 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000189339_deboever_eQTL_results.bed + jobid: 2189 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000189339_deboever_eQTL_results.bed + wildcards: gene=ENSG00000189339 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000196350_deboever_eQTL_results.bed + jobid: 2209 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000196350_deboever_eQTL_results.bed + wildcards: gene=ENSG00000196350 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000213780_deboever_eQTL_results.bed + jobid: 2394 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000213780_deboever_eQTL_results.bed + wildcards: gene=ENSG00000213780 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000197459_deboever_eQTL_results.bed + jobid: 2246 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000197459_deboever_eQTL_results.bed + wildcards: gene=ENSG00000197459 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000241106_deboever_eQTL_results.bed + jobid: 2568 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000241106_deboever_eQTL_results.bed + wildcards: gene=ENSG00000241106 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000180178_deboever_eQTL_results.bed + jobid: 1977 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000180178_deboever_eQTL_results.bed + wildcards: gene=ENSG00000180178 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000177236_deboever_eQTL_results.bed + jobid: 1924 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000177236_deboever_eQTL_results.bed + wildcards: gene=ENSG00000177236 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000183604_deboever_eQTL_results.bed + jobid: 2049 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000183604_deboever_eQTL_results.bed + wildcards: gene=ENSG00000183604 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000227124_deboever_eQTL_results.bed + jobid: 2464 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000227124_deboever_eQTL_results.bed + wildcards: gene=ENSG00000227124 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000243517_deboever_eQTL_results.bed + jobid: 2584 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000243517_deboever_eQTL_results.bed + wildcards: gene=ENSG00000243517 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000103245_deboever_eQTL_results.bed + jobid: 406 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000103245_deboever_eQTL_results.bed + wildcards: gene=ENSG00000103245 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000225151_deboever_eQTL_results.bed + jobid: 2442 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000225151_deboever_eQTL_results.bed + wildcards: gene=ENSG00000225151 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000068724_deboever_eQTL_results.bed + jobid: 156 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000068724_deboever_eQTL_results.bed + wildcards: gene=ENSG00000068724 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000166860_deboever_eQTL_results.bed + jobid: 1650 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000166860_deboever_eQTL_results.bed + wildcards: gene=ENSG00000166860 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000218537_deboever_eQTL_results.bed + jobid: 2422 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000218537_deboever_eQTL_results.bed + wildcards: gene=ENSG00000218537 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000179406_deboever_eQTL_results.bed + jobid: 1968 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000179406_deboever_eQTL_results.bed + wildcards: gene=ENSG00000179406 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000250579_deboever_eQTL_results.bed + jobid: 2626 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000250579_deboever_eQTL_results.bed + wildcards: gene=ENSG00000250579 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000258451_deboever_eQTL_results.bed + jobid: 2677 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000258451_deboever_eQTL_results.bed + wildcards: gene=ENSG00000258451 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000273170_deboever_eQTL_results.bed + jobid: 2793 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000273170_deboever_eQTL_results.bed + wildcards: gene=ENSG00000273170 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000250462_deboever_eQTL_results.bed + jobid: 2622 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000250462_deboever_eQTL_results.bed + wildcards: gene=ENSG00000250462 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000118200_deboever_eQTL_results.bed + jobid: 682 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000118200_deboever_eQTL_results.bed + wildcards: gene=ENSG00000118200 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000100890_deboever_eQTL_results.bed + jobid: 362 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000100890_deboever_eQTL_results.bed + wildcards: gene=ENSG00000100890 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000267547_deboever_eQTL_results.bed + jobid: 2736 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000267547_deboever_eQTL_results.bed + wildcards: gene=ENSG00000267547 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000163472_deboever_eQTL_results.bed + jobid: 1527 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000163472_deboever_eQTL_results.bed + wildcards: gene=ENSG00000163472 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000268163_deboever_eQTL_results.bed + jobid: 2746 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000268163_deboever_eQTL_results.bed + wildcards: gene=ENSG00000268163 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000030066_deboever_eQTL_results.bed + jobid: 62 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000030066_deboever_eQTL_results.bed + wildcards: gene=ENSG00000030066 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000270580_deboever_eQTL_results.bed + jobid: 2763 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000270580_deboever_eQTL_results.bed + wildcards: gene=ENSG00000270580 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000208772_deboever_eQTL_results.bed + jobid: 2373 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000208772_deboever_eQTL_results.bed + wildcards: gene=ENSG00000208772 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +rule eqtl: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed + output: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000164411_deboever_eQTL_results.bed + jobid: 1575 + reason: Missing output files: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000164411_deboever_eQTL_results.bed + wildcards: gene=ENSG00000164411 + resources: mem_per_thread_gb=4, disk_per_thread_gb=4 + + +[Thu May 26 09:08:11 2022] +localrule all: + input: /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000001561_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000003056_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000003056_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000003056_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000003056_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000003147_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000003402_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000003436_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000003436_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000004534_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000004534_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000004534_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000004864_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000005100_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000005801_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000006007_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000006007_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000006007_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000006007_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000006047_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000006047_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000006194_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000006282_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000006282_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000006282_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000006453_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000006453_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000006606_deboever_eQTL_results.bed, 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/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000008517_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000010270_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000010292_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000010327_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000010438_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000010626_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000011114_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000011114_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000011376_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000011376_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000011376_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000011426_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000011523_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000011638_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000011638_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000011638_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000011638_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000012048_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000012048_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000012048_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000012963_deboever_eQTL_results.bed, 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/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000014138_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000014138_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000014216_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000015413_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000015532_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000015532_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000015532_deboever_eQTL_results.bed, 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/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000184669_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000250529_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000099984_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000177236_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000184674_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000101638_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000260238_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000264538_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000241962_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000068724_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000213973_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000103245_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000268119_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000165476_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000271020_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000261061_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000187922_deboever_eQTL_results.bed, /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/ENSG00000230795_deboever_eQTL_results.bed + +Job counts: + count jobs + 1 all + 249 eqtl + 250 +This was a dry-run (flag -n). The order of jobs does not reflect the order of execution. diff --git a/eQTL_check/metadata_prep.R b/eQTL_check/metadata_prep.R new file mode 100644 index 0000000..03264ef --- /dev/null +++ b/eQTL_check/metadata_prep.R @@ -0,0 +1,18 @@ +library(Seurat) +library(tivdyverse) +library(data.table) + + +dir.create("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Kilpinen_eQTLs/") + + + +seurat <- readRDS("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/seurat_integrated_noncryo_1pct_expressing.rds") + + +### Make DF for modeling ### +df_hier_unscale <- data.frame("Village" = as.factor(ifelse(seurat@meta.data$Time == "Baseline", 0, 1)), "Line" = seurat@meta.data$Final_Assignment, "Replicate" = as.factor(gsub("[A-Z][a-z]+", "", seurat@meta.data$MULTI_ID)), "Site" = seurat$Location) +df_hier_unscale$Barcode <- rownames(df_hier_unscale) + +fwrite(df_hier_unscale, paste0("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Kilpinen_eQTLs/cell_meta.tsv"), sep = "\t") + diff --git a/eQTL_check/pull_eQTL_SNPs.sh b/eQTL_check/pull_eQTL_SNPs.sh new file mode 100644 index 0000000..4fd2b48 --- /dev/null +++ b/eQTL_check/pull_eQTL_SNPs.sh @@ -0,0 +1,122 @@ +#!/bin/bash + + +vcf=/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/data/SNPgenotypes/merged_imputed_AllChrs_iPSC.vcf +kilpinen=/directflow/SCCGGroupShare/projects/DrewNeavin/References/iPSC_eQTLs/KilpineniPSCeQTLs.txt +deboever=/directflow/SCCGGroupShare/projects/DrewNeavin/References/iPSC_eQTLs/DeBoeveriPSCeQTLs.txt + +OUT=/directflow/SCCGGroupShare/projects/DrewNeavin/References/iPSC_eQTLs +OUT_TMP=/directflow/SCCGGroupShare/projects/DrewNeavin/References/iPSC_eQTLs/tmp + +mkdir -p $OUT_TMP + +INTERSECT_OUT=/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap + +mkdir -p $INTERSECT_OUT + + +##### KILPINEN DATA ##### +#### Make bed file #### + +### Get just first column ### +awk 'BEGIN{OFS="\t"}{print($1, $2 -1, $2)}' $kilpinen | \ + sed 's/chr\t-1\tpos/#chrom\tstart\tend/g' > $OUT_TMP/kilpinen_tmp.tsv + + + +### Add back rest of the columns ### +cut -f 3- $kilpinen > $OUT_TMP/other_columns.tsv + + +paste $OUT_TMP/kilpinen_tmp.tsv $OUT_TMP/other_columns.tsv > $OUT/kilpinen.bed + + +### Remove unacceptable records (copy njmber of inversions) from vcf ### + + +sed '/ $INTERSECT_OUT/merged_imputed_AllChrs_iPSC_.vcf +sed -i '//d' $INTERSECT_OUT/merged_imputed_AllChrs_iPSC_.vcf + + +### Intersect with unfiltered vcf ### +conda activate bedtools + + bedtools intersect -a $OUT/kilpinen.bed -b $INTERSECT_OUT/merged_imputed_AllChrs_iPSC_.vcf -wa -wb > $INTERSECT_OUT/kilpinen_imputed_overlapping.bed + +conda deactivate + + +### Filter on individuals and MAF for our lines ### +VCF_R2=/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/data/SNPgenotypes/merged_imputed_AllChrs_iPSC_R2_0.3.vcf + +sed '/ $INTERSECT_OUT/merged_imputed_AllChrs_iPSC_R2_0.3.vcf +sed -i '//d' $INTERSECT_OUT/merged_imputed_AllChrs_iPSC_R2_0.3.vcf + + +INDIVS=/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/data/SNPgenotypes/lines.txt + +conda activate vcftools + + vcftools --vcf $INTERSECT_OUT/merged_imputed_AllChrs_iPSC_R2_0.3.vcf --keep $INDIVS --recode --recode-INFO-all --mac 1 -o $INTERSECT_OUT/merged_imputed_AllChrs_iPSC_R2_0.3_filtered + +conda deactivate + +bcftools view -e 'COUNT(GT="AA")=N_SAMPLES || COUNT(GT="RR")=N_SAMPLES || COUNT(GT="RA")=N_SAMPLES' $INTERSECT_OUT/merged_imputed_AllChrs_iPSC_R2_0.3_filtered.recode.vcf > $INTERSECT_OUT/merged_imputed_AllChrs_iPSC_R2_0.3_filtered_diff_genotypes.vcf + + +### Redo intersection with these SNPs ##$# +conda activate bedtools + + bedtools intersect -a $OUT/kilpinen.bed -b $INTERSECT_OUT/merged_imputed_AllChrs_iPSC_R2_0.3_filtered_diff_genotypes.vcf -wa -wb > $INTERSECT_OUT/kilpinen_imputed_overlapping_filtered.bed + +conda deactivate + +### Use this file to test for trends in gene +awk 'BEGIN{FS=OFS="\t"}{print($24, $7)}' $INTERSECT_OUT/kilpinen_imputed_overlapping_filtered.bed | sed 's/\..*//g' > $INTERSECT_OUT/gene_snp_list.tsv + +sed -i '1i snp\tgene' $INTERSECT_OUT/gene_snp_list.tsv + + + + + + + +##### DEBOEVER DATA ##### +#### Make bed file #### + +### Get just first three column for bed ### +awk 'BEGIN{OFS="\t"}{print($2, $3, $4)}' $deboever | \ + sed 's/^chr//g' | + sed 's/start\tend\tmarker_id/chrom\tstart\tend/g' > $OUT_TMP/deboever_tmp.tsv + + + +### Add back rest of the columns ### +cut -f 5- $deboever > $OUT_TMP/deboever_other_columns.tsv + + +paste $OUT_TMP/deboever_tmp.tsv $OUT_TMP/deboever_other_columns.tsv > $OUT/deboever.bed + + +### Intersect with these SNPs ##$# +conda activate bedtools + + bedtools intersect -a $OUT/deboever.bed -b $INTERSECT_OUT/merged_imputed_AllChrs_iPSC_R2_0.3_filtered_diff_genotypes.vcf -wa -wb > $INTERSECT_OUT/deboever_imputed_overlapping_filtered.bed + +conda deactivate + + +head -n 1 $OUT/deboever.bed > $INTERSECT_OUT/deboever_header_bed.tsv +grep "#CHROM" $INTERSECT_OUT/merged_imputed_AllChrs_iPSC_R2_0.3_filtered_diff_genotypes.vcf > $INTERSECT_OUT/deboever_header_vcf.tsv +paste -d"\t" $INTERSECT_OUT/deboever_header_bed.tsv $INTERSECT_OUT/deboever_header_vcf.tsv > $INTERSECT_OUT/deboever_combined_header.tsv + +cat $INTERSECT_OUT/deboever_combined_header.tsv > $INTERSECT_OUT/deboever_imputed_overlapping_filtered_header.bed +cat $INTERSECT_OUT/deboever_imputed_overlapping_filtered.bed >> $INTERSECT_OUT/deboever_imputed_overlapping_filtered_header.bed + + +### Use this file to test for trends in gene +awk 'BEGIN{FS=OFS="\t"}{print($31, $15, $25)}' $INTERSECT_OUT/deboever_imputed_overlapping_filtered_header.bed | sed 's/\..*\t/\t/g' > $INTERSECT_OUT/deboever_gene_snp_list.tsv + + + diff --git a/eQTL_check/test_eQTL.R b/eQTL_check/test_eQTL.R new file mode 100644 index 0000000..e90629f --- /dev/null +++ b/eQTL_check/test_eQTL.R @@ -0,0 +1,196 @@ +### Reason: test eQTLs identified in Kilpinen et al in our dataset +### Author: Drew Neavin +### Date: 1 April, 2022 + + +library(data.table) +library(Seurat) +library(vcfR) +library(glmmTMB) +library(dplyr) +library(ggplot2) + + + +##### Bring in variables ##### +### Bring in arguments +args <- commandArgs(trailingOnly = TRUE) +ensg <- args[1] +outdir <- args[2] +bed <- args[3] + + +cell_line_colors <- c("FSA0006" = "#F79E29", "MBE1006" = "#9B2C99", "TOB0421"= "#35369C") + + +##### Read in dataframe of pairs to test ##### +snp_gene_pairs <- fread(bed) +snp_gene_pairs$gene_id <- gsub("\\..+", "", snp_gene_pairs$gene_id) + + + + +##### Subset the correct snp ##### +snp_gene_pairs_subset <- snp_gene_pairs[gene_id == ensg] + + + +##### Read in data ##### +residuals <- readRDS(paste0("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review2/gene_separated/residuals4qtl/", ensg, "_residuals4qtl.rds")) +residual_dt <- data.table(residuals) +colnames(residual_dt) <- c("residual") +residual_dt$Barcode <- names(residuals) + +vcf <- read.vcfR("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_finalized_snps.recode.vcf") +meta <- fread("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/Kilpinen_eQTLs/cell_meta.tsv", sep = "\t") +data <- meta[residual_dt, on = "Barcode"] +data$Barcode <- NULL + + + + +### Summarize data by site and line and replicatae +data_sum <- data[, .(residual=mean(residual)), by = .(Village, Line, Site, Replicate)] + + + +##### Get the snp from the vcf ##### +## GT ## +snp_dt <- data.table(extract.gt(element = "GT",vcf, IDtoRowNames = F)) + + +if (!all(colSums(is.na(snp_dt)) == nrow(snp_dt))){ + message("Found GT genotype format in cluster vcf. Will use that metric for cluster correlation.") + format_clust = "GT" + + if (any(grepl("\\|",snp_dt[,1]))){ + separator = "|" + message("Detected | separator for GT genotype format in cluster vcf") + } else if (any(grepl("/",snp_dt[,1]))) { + separator = "/" + message("Detected / separator for GT genotype format in cluster vcf") + } else { + format_clust = NA + message("Can't identify a separator for the GT field in cluster vcf, moving on to using GP.") + } + if (!is.na(format_clust)){ + snp_dt <- data.table(as_tibble(lapply(snp_dt, function(x) {gsub(paste0("0\\",separator,"0"),0, x)}) %>% + lapply(., function(x) {gsub(paste0("0\\",separator,"1"),1, x)}) %>% + lapply(., function(x) {gsub(paste0("1\\",separator,"0"),1, x)}) %>% + lapply(., function(x) {gsub(paste0("1\\",separator,"1"),2, x)}))) + } +} + + +colnames(snp_dt) <- gsub("36_TOB00421_i_E8", "TOB0421", colnames(snp_dt)) %>% + gsub("22_FSA", "FSA0006", .) %>% + gsub("29_MBE", "MBE1006", .) + + +## Get specific SNP ## +snp_dt$ID_ref_alt <- paste0(vcf@fix[,'CHROM'],":", vcf@fix[,'POS'],"_", vcf@fix[,'REF'],"_", vcf@fix[,'ALT']) + +snp_dt_subset <- snp_dt[ID_ref_alt %in% snp_gene_pairs_subset$ID_ref_alt] + + + +### Add SNP data to data data.table ### +snp_dt_subset_long <- melt(snp_dt_subset, id.vars = c("ID_ref_alt"), measure.vars = c("TOB0421", "FSA0006", "MBE1006")) + + + +##### Make dataframe with deboever results, snp genotypes and our beta + pvalue ##### +results_dt <- snp_gene_pairs_subset[,c("chrom", "start", "end", "rsid", "maf", "stat", "pvalue", "beta", "sebeta", "gene_id", "gene_name", "ref","alt", "ID", "REF", "ALT", "ID_ref_alt")] +colnames(results_dt) <- c(colnames(results_dt)[1:4],paste0(colnames(results_dt)[5:13], "_deboever"), colnames(results_dt)[14:17]) +results_dt <- results_dt[snp_dt_subset, on = "ID_ref_alt"] + +results_dt$dataset_beta <- as.numeric(NA) +results_dt$dataset_beta_se <- as.numeric(NA) +results_dt$dataset_z <- as.numeric(NA) +results_dt$dataset_p <- as.numeric(NA) +results_dt$direction <- as.character(NA) + + +for (snp in unique(snp_dt_subset_long$ID_ref_alt)){ + + data_sum_snp <- snp_dt_subset_long[ID_ref_alt == snp][data_sum, on = c("variable" = "Line")] + + gt_long <- melt(results_dt[ID_ref_alt == snp][,c("ID_ref_alt", "TOB0421", "FSA0006", "MBE1006", "REF", "ALT")], measure.vars = c("TOB0421", "FSA0006", "MBE1006")) + gt_long$Genotype <- ifelse(gt_long$value == 0, paste0(gt_long$REF, "/", gt_long$REF), + ifelse(gt_long$value == 1, paste0(gt_long$REF, "/", gt_long$ALT), + ifelse(gt_long$value == 2, paste0(gt_long$ALT, "/", gt_long$ALT), NA))) + + gt_long <- unique(gt_long) + + data_sum_snp <- gt_long[data_sum_snp, on = c("value", "variable", "ID_ref_alt")] + + data_sum_snp$Genotype <- factor(data_sum_snp$Genotype, levels = unique(data_sum_snp[order(value)]$Genotype)) + + + ##### Check for beta ##### + base_model <- glmmTMB(residual ~ 1, data = data_sum_snp, REML = TRUE) + snp_model <- glmmTMB(as.numeric(residual) ~ as.numeric(value), data = data_sum_snp, REML = TRUE) + + anova_results <- anova(base_model, snp_model) + + results_dt[ID_ref_alt == snp]$dataset_beta <- summary(snp_model)$coefficients$cond[2,1] + results_dt[ID_ref_alt == snp]$dataset_beta_se <- summary(snp_model)$coefficients$cond[2,2] + results_dt[ID_ref_alt == snp]$dataset_z <- summary(snp_model)$coefficients$cond[2,3] + results_dt[ID_ref_alt == snp]$dataset_p <- anova_results$`Pr(>Chisq)`[2] + + if (results_dt[ID_ref_alt == snp]$ref_deboever == results_dt[ID_ref_alt == snp]$REF & results_dt[ID_ref_alt == snp]$alt_deboever == results_dt[ID_ref_alt == snp]$ALT) { + if ((results_dt[ID_ref_alt == snp]$beta_deboever * results_dt[ID_ref_alt == snp]$dataset_beta) > 0){ + results_dt[ID_ref_alt == snp]$direction <- "match" + } else { + results_dt[ID_ref_alt == snp]$direction <- "opposite" + } + } else if (results_dt[ID_ref_alt == snp]$ref_deboever == results_dt[ID_ref_alt == snp]$ALT & results_dt[ID_ref_alt == snp]$REF == results_dt[ID_ref_alt == snp]$alt_deboever) { + if ((results_dt[ID_ref_alt == snp]$beta_deboever * results_dt[ID_ref_alt == snp]$dataset_beta) < 0){ + results_dt[ID_ref_alt == snp]$direction <- "match" + } else { + results_dt[ID_ref_alt == snp]$direction <- "opposite" + } + } else { + results_dt[ID_ref_alt == snp]$direction <- "different_snp" + } + + ###### Make a figure of the results + ### Different shapes for location + ### Different fill for village and uniculture + ### Color by line + if (!results_dt[ID_ref_alt == snp]$direction == "different_snp"){ + shapes <- c(0,15,1,16,2,17) + names(shapes) <- paste0(c("Sydney", "Sydney", "Melbourne", "Melbourne", "Brisbane", "Brisbane"), " ", rep(c("Uni-culture","Village"))) + + data_sum_snp$shapes <- paste0(data_sum_snp$Site, " ", gsub(0, "Uni-culture",gsub(1, "Village", data_sum_snp$Village))) + data_sum_snp$value <- factor(data_sum_snp$value, levels = sort(unique(data_sum_snp$value))) + + labels <- levels(data_sum_snp$Genotype) + names(labels) <- as.numeric(levels(data_sum_snp$value)) + + plot <- ggplot(data_sum_snp, aes(value, residual)) + + geom_point(aes(shape = shapes, color = variable)) + + theme_classic() + + scale_color_manual(values = cell_line_colors) + + scale_fill_manual(values = cell_line_colors) + + scale_shape_manual(values = shapes) + + geom_smooth(aes(as.numeric(value), residual), position = "identity",method = "lm", color = "black", se=FALSE) + + scale_x_discrete(labels=labels) + + ylab("Normalized Expression") + + ggtitle(paste0(results_dt[ID_ref_alt == snp]$rsid, "-", results_dt[ID_ref_alt == snp]$gene_name_deboever, " eQTL"), + subtitle = paste0("beta = ", round(results_dt[ID_ref_alt == snp]$dataset_beta, 3))) + + xlab(paste0(results_dt[ID_ref_alt == snp]$rsid, '\nGenotype')) + + theme(plot.title = element_text(hjust = 0.5), + plot.subtitle = element_text(hjust = 0.5)) + + labs(color = "iPSC Line", shape = "Site & Village", fill = NULL) + + ggsave(plot, filename = paste0(outdir,"plots/",ensg, "_", snp,"_deboever_eQTL_results.png"), width = 5, height = 3.5) + ggsave(plot, filename = paste0(outdir,"plots/",ensg, "_", snp,"_deboever_eQTL_results.pdf"), width = 5, height = 3.5) + } +} + +fwrite(results_dt, paste0(outdir,"beds/",ensg, "_deboever_eQTL_results.bed"), sep = "\t") + + + + diff --git a/eQTL_check/test_eQTL.sh b/eQTL_check/test_eQTL.sh new file mode 100644 index 0000000..ad9a224 --- /dev/null +++ b/eQTL_check/test_eQTL.sh @@ -0,0 +1,109 @@ + + +SNAKEFILE="/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/scripts/eQTL_check/test_eQTL.smk" +LOG="/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/logs/" + +mkdir -p $LOG + +snakemake \ + --snakefile $SNAKEFILE \ + --dryrun \ + --cores 1 \ + --quiet \ + --unlock + + +snakemake \ + --snakefile $SNAKEFILE \ + --dryrun \ + --cores 1 \ + --reason > jobs2run.txt + + + +nohup \ + snakemake \ + --snakefile $SNAKEFILE \ + --jobs 200 \ + --use-singularity \ + --restart-times 1 \ + --keep-going \ + --cluster \ + "qsub -S /bin/bash \ + -q short.q \ + -r yes \ + -pe smp {threads} \ + -l tmp_requested={resources.disk_per_thread_gb}G \ + -l mem_requested={resources.mem_per_thread_gb}G \ + -e $LOG \ + -o $LOG \ + -j y \ + -V" \ + > $LOG/nohup_`date +%Y-%m-%d.%H:%M:%S`.log & + + +snakemake \ + --snakefile $SNAKEFILE \ + --dryrun \ + --cores 1 \ + --quiet \ + --unlock + + +snakemake \ + --snakefile $SNAKEFILE \ + --dryrun \ + --cores 1 \ + --quiet \ + --cleanup-metadata \ + /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000116001_icc.rds \ + /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000116001_fitted_models.rds \ + /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000084112_icc.rds \ + /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000084112_fitted_models.rds \ + /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/icc/ENSG00000130706_icc.rds \ + /directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/variance_partition_post_review/gene_separated/fit_models/ENSG00000130706_fitted_models.rds + + + + + + +ENSG00000140481 +ENSG00000158552 +ENSG00000167004 +ENSG00000184281 +ENSG00000185437 +ENSG00000185875 +ENSG00000196109 +ENSG00000197536 +ENSG00000215910 +ENSG00000215883 +ENSG00000258297 +ENSG00000259488 +ENSG00000274877 + + +ENSG00000158555 +ENSG00000167005 +ENSG00000184292 +ENSG00000184281 +ENSG00000185437 +ENSG00000185875 +ENSG00000196109 +ENSG00000197536 +ENSG00000215866 +ENSG00000258289 +ENSG00000259485 +ENSG00000274828 + + +rm ENSG00000167011_fitted_models.rds +rm ENSG00000184304_fitted_models.rds +rm ENSG00000185477_fitted_models.rds +rm ENSG00000185900_fitted_models.rds +rm ENSG00000196132_fitted_models.rds +rm ENSG00000197566_fitted_models.rds +rm ENSG00000217930_fitted_models.rds +rm ENSG00000258593_fitted_models.rds +rm ENSG00000259715_fitted_models.rds +rm ENSG00000275074_fitted_models.rds diff --git a/eQTL_check/test_eQTL.smk b/eQTL_check/test_eQTL.smk new file mode 100644 index 0000000..85465ea --- /dev/null +++ b/eQTL_check/test_eQTL.smk @@ -0,0 +1,32 @@ +import pandas as pd + + +genes_file = "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned_snp_gene.tsv" +genes = pd.read_csv(genes_file, sep = "\t") +# genes = genes.iloc[1] + +rule all: + input: + expand("/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/{gene}_deboever_eQTL_results.bed", gene = genes.gene_id), + + +rule eqtl: + input: + bed = "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/eQTL_check/KilpinenOverlap/deboever_imputed_overlapping_filtered_header_pruned.bed" + output: + "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/{gene}_deboever_eQTL_results.bed" + resources: + mem_per_thread_gb = lambda wildcards, attempt: attempt * 4, + disk_per_thread_gb = lambda wildcards, attempt: attempt * 4 + threads: 4 + params: + script = "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/scripts/eQTL_check/test_eQTL.R", + outdir="/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/", + snp=lambda wildcards: genes.ID_ref_alt[genes.gene_id == wildcards.gene], + log: + shell: + """ + /directflow/SCCGGroupShare/projects/DrewNeavin/software/anaconda3/envs/baseR402/bin/Rscript {params.script} {wildcards.gene} {params.outdir} {input.bed} + """ + + diff --git a/eQTL_check/test_eQTL_combine.R b/eQTL_check/test_eQTL_combine.R new file mode 100644 index 0000000..6252323 --- /dev/null +++ b/eQTL_check/test_eQTL_combine.R @@ -0,0 +1,92 @@ +library(data.table) +library(dplyr) +library(ggplot2) +library(colorspace) + + +indir <- "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/gene_separate/beds/" +outdir <- "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/output/deboever/combined/" + +dir.create(outdir, recursive = TRUE) + + +### Read in results +files <- list.files(indir) + +bed_results_list <- lapply(files, function(x){ + fread(paste0(indir, x), sep = "\t") +}) + + +results_dt <- do.call(rbind, bed_results_list) + + +results_dt$fdr <- p.adjust(results_dt$dataset_p, method = "fdr") + + +results_dt <- results_dt[order(fdr)] + +head(results_dt, n =100) + +results_dt[TOB0421 != FSA0006 & TOB0421 != MBE1006 & FSA0006 != MBE1006] + +fwrite(results_dt, paste0(outdir, "deboever_overlap_results.tsv"), sep = "\t") + +results_dt <- results_dt[direction != "different_snp"] +results_dt$significant <- ifelse(results_dt$fdr < 0.05, TRUE, FALSE) + +results_dt[gene_name_deboever == "CHCHD2"] + +results_dt$direction <- factor(results_dt$direction, levels = c("opposite","match")) + + +correlation_plot <- ggplot(results_dt, aes(beta_deboever, dataset_beta, color = log(fdr))) + + geom_point() + + theme_classic() + + scale_color_continuous_sequential(palette = "Purp", rev = FALSE) + # scale_color_manual(values = c("grey","black")) + +ggsave(correlation_plot, filename = paste0(outdir, "correlation_plot.png")) + + +histogram_plot <- ggplot(results_dt, aes(fdr, fill = direction)) + + geom_histogram(position = "stack", binwidth = 0.05) + + theme_classic() + + geom_vline(aes(xintercept=0.05), + color="red", linetype="dashed", size=1) + + scale_fill_manual(values = c("grey","black")) + +ggsave(histogram_plot, filename = paste0(outdir, "histogram_plot.png")) + +histogram_plot_log <- ggplot(results_dt, aes(log10(fdr), fill = direction)) + + geom_histogram(position = "stack", binwidth = 1) + + theme_classic() + + geom_vline(aes(xintercept=log10(0.05)), + color="red", linetype="dashed", size=0.25) + + scale_fill_manual(values = c("grey","black")) + + scale_y_continuous(expand = c(0, 0)) + + +ggsave(histogram_plot_log, filename = paste0(outdir, "histogram_plot_log.png")) + + +popout_histogram_plot_log <- ggplot(results_dt[log10(fdr) < -10], aes(log10(fdr), fill = direction)) + + geom_histogram(position = "stack", binwidth = 1) + + theme_classic() + + scale_fill_manual(values = c("grey","black")) + + theme(axis.title.x=element_blank(), + axis.title.y=element_blank(), + legend.position="none", + axis.text.x=element_text(size=7), + axis.text.y=element_text(size=7)) + + scale_y_continuous(expand = c(0, 0)) + +ggsave(popout_histogram_plot_log, filename = paste0(outdir, "popout_histogram_plot_log.png")) + +combined_plot_log <- histogram_plot_log + annotation_custom(ggplotGrob(popout_histogram_plot_log), xmin = -35, xmax = -15, + ymin = 500, ymax = 1225) + +ggsave(combined_plot_log, filename = paste0(outdir, "histogram_plot_log_w_popout.png"), width = 5, height = 3) +ggsave(combined_plot_log, filename = paste0(outdir, "histogram_plot_log_w_popout.pdf"), width = 5, height = 3) + + diff --git a/multi-passage/preQC.R b/multi-passage/preQC.R new file mode 100644 index 0000000..323d606 --- /dev/null +++ b/multi-passage/preQC.R @@ -0,0 +1,119 @@ +library(Seurat) +library(data.table) +library(dplyr) +library(tidyverse) +library(colorspace) +library(Nebulosa) + + +##### Set up directories ##### +dir <- "/directflow/SCCGGroupShare/projects/DrewNeavin/iPSC_Village/" +datadir <- paste0(dir, "data/multi-passage/GIMR_GWCCG_211213_JOSPOW_10x_3p_results/GIMR_GWCCG_211213_JOSPOW_10x_3p/analyses/") +outdir <- paste0(dir, "output/multi-passage/preQC/") + + + +##### Set up variables ##### +pools <- dir(datadir) + + +## Read in expression data +counts_list <- lapply(pools, function(x){ + print(x) + Read10X(paste0(datadir,x, "/GE/",x,"/outs/per_sample_outs/",x,"/count/sample_feature_bc_matrix"), gene.column = 1) +}) +names(counts_list) <- pools + + +## Add poolnames to cell names so can easily match back if there are any cells with same barcoe +counts_list <- lapply(names(counts_list), function(x){ + colnames(counts_list[[x]]) <- gsub("-1", "", paste0(x, "_", colnames(counts_list[[x]]))) + return(counts_list[[x]]) +}) +names(counts_list) <- pools + + +## Make seurat object ## +seurat_list <- lapply(counts_list, function(x){ + CreateSeuratObject(counts = x) +}) +names(seurat_list) <- pools + + +seurat <- merge(seurat_list[[1]], y = seurat_list[2:length(seurat_list)],project = "Village_Phase1_multi-passage") + + + +### Add gene ID data to gene level metadata ### +features <- fread(paste0(datadir,pools[1], "/GE/",pools[1],"/outs/per_sample_outs/",pools[1],"/count/sample_feature_bc_matrix/features.tsv.gz"), col.names = c("ENSG", "Gene_ID", "Assay")) +features$Assay <- NULL + +features_df <- data.frame(features) +rownames(features_df) <- features$ENSG +features_df$ENSG <- NULL + +seurat[["RNA"]] <- AddMetaData(seurat[["RNA"]], features_df) + + +## Add QC metrics +RbGeneList <- read.delim(file = "/directflow/SCCGGroupShare/projects/DrewNeavin/References/RibosomalGeneList_GeneID_ENSG.txt") +MtGeneList <- read.delim(file = "/directflow/SCCGGroupShare/projects/DrewNeavin/References/MtGeneList_GeneID_ENSG.txt") +print("Calculating Mt %") +seurat <- PercentageFeatureSet(seurat, features = MtGeneList$ENSG, col.name = "percent.mt") +print("Calculating Rb %") +RbGeneList <- RbGeneList[which(RbGeneList$ENSG %in% rownames(seurat)),] +seurat <- PercentageFeatureSet(seurat, features = RbGeneList$ENSG, col.name = "percent.rb") + + +### Make pre-QC figures ### +seurat <- NormalizeData(seurat, verbose = TRUE) +seurat <- FindVariableFeatures(seurat, selection.method = "mean.var.plot") +seurat <- ScaleData(seurat, features = VariableFeatures(seurat)) +seurat <- RunPCA(seurat, features = VariableFeatures(object = seurat)) +seurat <- FindNeighbors(seurat, dims = 1:10) +seurat <- FindClusters(seurat, resolution = 0.5) +seurat <- RunUMAP(seurat, dims = 1:10) + + +seurat$Pool <- gsub("_[ATCG]+", "", colnames(seurat)) + + +### QC Figures pre filtering ### +plot_mt_pct <- VlnPlot(seurat, features = c( "percent.mt"), group.by = "Pool", pt.size = 0) + + scale_fill_discrete_sequential(palette = "SunsetDark") +ggsave(plot_mt_pct, filename = paste0(outdir,"Mt_pct_vln.png")) + +plot_rb_pct <- VlnPlot(seurat, features = c( "percent.rb"), group.by = "Pool", pt.size = 0) + + scale_fill_discrete_sequential(palette = "SunsetDark") +ggsave(plot_rb_pct, filename = paste0(outdir,"Rb_pct_vln.png")) + +plot_n_count <- VlnPlot(seurat, features = c( "nCount_RNA"), group.by = "Pool", pt.size = 0) + + scale_fill_discrete_sequential(palette = "SunsetDark") +ggsave(plot_n_count, filename = paste0(outdir,"N_count_vln.png")) + +plot_nFeature_RNA <- VlnPlot(seurat, features = c( "nFeature_RNA"), group.by = "Pool", pt.size = 0) + + scale_fill_discrete_sequential(palette = "SunsetDark") +ggsave(plot_nFeature_RNA, filename = paste0(outdir,"nFeature_RNA_vln.png")) + +lib_mt <- FeatureScatter(seurat, feature1 = "nCount_RNA", feature2 = "percent.mt", group.by = "Pool") + + scale_color_discrete_sequential(palette = "SunsetDark", alpha = 0.25) +ggsave(lib_mt, filename = paste0(outdir,"lib_mt.png")) + +lib_genes <- FeatureScatter(seurat, feature1 = "nCount_RNA", feature2 = "nFeature_RNA", group.by = "Pool") + + scale_color_discrete_sequential(palette = "SunsetDark", alpha = 0.25) +ggsave(lib_genes, filename = paste0(outdir,"lib_genes.png")) + +nebulosa_mt_umap <- plot_density(seurat, "percent.mt", pal = "plasma") +ggsave(nebulosa_mt_umap, filename = paste0(outdir,"mt_percent_umap.png")) + +nebulosa_rb_umap <- plot_density(seurat, "percent.rb", pal = "plasma") +ggsave(nebulosa_rb_umap, filename = paste0(outdir,"rb_percent_umap.png")) + +umap_Pool <- DimPlot(seurat, group.by = "Pool") + + scale_color_discrete_sequential(palette = "SunsetDark") +ggsave(umap_Pool, filename = paste0(outdir,"pool_umap.png")) + +mt_umap <- FeaturePlot(seurat, features = "percent.mt") + + scale_color_continuous_sequential(palette = "RedPurple") +ggsave(mt_umap, filename = paste0(outdir,"mt_percent_umap_seurat.png")) +