environment.yml

name: bioem_toolkit
channels:
  - conda-forge
  - salilab
  - defaults
dependencies:
  - _libgcc_mutex=0.1=conda_forge
  - _openmp_mutex=4.5=2_gnu
  - bzip2=1.0.8=h7f98852_4
  - ca-certificates=2022.12.7=ha878542_0
  - ld_impl_linux-64=2.40=h41732ed_0
  - libblas=3.9.0=16_linux64_openblas
  - libcblas=3.9.0=16_linux64_openblas
  - libexpat=2.5.0=hcb278e6_1
  - libffi=3.4.2=h7f98852_5
  - libgcc-ng=12.2.0=h65d4601_19
  - libgfortran-ng=12.2.0=h69a702a_19
  - libgfortran5=12.2.0=h337968e_19
  - libgomp=12.2.0=h65d4601_19
  - liblapack=3.9.0=16_linux64_openblas
  - libnsl=2.0.0=h7f98852_0
  - libopenblas=0.3.21=pthreads_h78a6416_3
  - libsqlite=3.40.0=h753d276_0
  - libstdcxx-ng=12.2.0=h46fd767_19
  - libuuid=2.38.1=h0b41bf4_0
  - libzlib=1.2.13=h166bdaf_4
  - mrcfile=1.4.3=pyhd8ed1ab_0
  - ncurses=6.3=h27087fc_1
  - numpy=1.24.2=py311h8e6699e_0
  - openssl=3.1.0=h0b41bf4_0
  - pandas=2.0.0=py311h2872171_0
  - pip=23.1=pyhd8ed1ab_0
  - python=3.11.3=h2755cc3_0_cpython
  - python-dateutil=2.8.2=pyhd8ed1ab_0
  - python-tzdata=2023.3=pyhd8ed1ab_0
  - python_abi=3.11=3_cp311
  - pytz=2023.3=pyhd8ed1ab_0
  - readline=8.2=h8228510_1
  - setuptools=67.6.1=pyhd8ed1ab_0
  - six=1.16.0=pyh6c4a22f_0
  - tk=8.6.12=h27826a3_0
  - tzdata=2023c=h71feb2d_0
  - wheel=0.40.0=pyhd8ed1ab_0
  - xz=5.2.6=h166bdaf_0
  - pip:
    - aiosignal==1.3.1
    - attrs==23.1.0
    - certifi==2022.12.7
    - charset-normalizer==3.1.0
    - click==8.1.3
    - distlib==0.3.6
    - filelock==3.12.0
    - frozenlist==1.3.3
    - grpcio==1.54.0
    - idna==3.4
    - jsonschema==4.17.3
    - msgpack==1.0.5
    - packaging==23.1
    - platformdirs==3.2.0
    - protobuf==4.22.3
    - pyrsistent==0.19.3
    - pyyaml==6.0
    - ray==2.3.1
    - requests==2.28.2
    - urllib3==1.26.15
    - virtualenv==20.21.0