Unwanted ageing methods not being filter out by cleanPacFIN()

[chantelwetzel-noaa]

I was recently looking at data for sablefish and was exploring how cleanPacFIN() worked in terms of filtering out specific ageing methods. In this I noticed that surface reads (S) and mixed-reads (M) were being returned from the function even with the keep_age_method was specified to only retain break-and-burn (B) reads.

data <- PacFIN.Utilities::cleanPacFIN(
  Pdata = sablefish.bds,
  CLEAN = TRUE,
  keep_age_method = c("B"),
  verbose = TRUE)