diff --git a/articles/Aster-aragonensis-MPorto.jpg b/articles/Aster-aragonensis-MPorto.jpg
new file mode 100644
index 0000000..426a570
Binary files /dev/null and b/articles/Aster-aragonensis-MPorto.jpg differ
diff --git a/articles/articles/logo.html b/articles/articles/logo.html
new file mode 100644
index 0000000..22a658c
--- /dev/null
+++ b/articles/articles/logo.html
@@ -0,0 +1,8 @@
+<html>
+  <head>
+    <meta http-equiv="refresh" content="0;URL=https://www.pattern.institute/eunis.habitats/articles/logo.html" />
+    <meta name="robots" content="noindex">
+    <link rel="canonical" href="https://www.pattern.institute/eunis.habitats/articles/logo.html">
+  </head>
+</html>
+
diff --git a/articles/index.html b/articles/index.html
index 7dfa2a0..f4c2fe1 100644
--- a/articles/index.html
+++ b/articles/index.html
@@ -40,6 +40,8 @@ <h3>All vignettes</h3>
         <dd>
         </dd><dt><a href="eunis-classification.html">EUNIS Classification Systems</a></dt>
         <dd>
+        </dd><dt><a href="logo.html">About the Logomark</a></dt>
+        <dd>
       </dd></dl></div>
   </main></div>
 
diff --git a/articles/logo.html b/articles/logo.html
new file mode 100644
index 0000000..615e68c
--- /dev/null
+++ b/articles/logo.html
@@ -0,0 +1,118 @@
+<!DOCTYPE html>
+<!-- Generated by pkgdown: do not edit by hand --><html lang="en">
+<head>
+<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
+<meta charset="utf-8">
+<meta http-equiv="X-UA-Compatible" content="IE=edge">
+<meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no">
+<title>About the Logomark • eunis.habitats</title>
+<!-- favicons --><link rel="icon" type="image/png" sizes="16x16" href="../favicon-16x16.png">
+<link rel="icon" type="image/png" sizes="32x32" href="../favicon-32x32.png">
+<link rel="apple-touch-icon" type="image/png" sizes="180x180" href="../apple-touch-icon.png">
+<link rel="apple-touch-icon" type="image/png" sizes="120x120" href="../apple-touch-icon-120x120.png">
+<link rel="apple-touch-icon" type="image/png" sizes="76x76" href="../apple-touch-icon-76x76.png">
+<link rel="apple-touch-icon" type="image/png" sizes="60x60" href="../apple-touch-icon-60x60.png">
+<script src="../deps/jquery-3.6.0/jquery-3.6.0.min.js"></script><meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no">
+<link href="../deps/bootstrap-5.3.1/bootstrap.min.css" rel="stylesheet">
+<script src="../deps/bootstrap-5.3.1/bootstrap.bundle.min.js"></script><link href="../deps/Nunito-0.4.9/font.css" rel="stylesheet">
+<link href="../deps/Inconsolata-0.4.9/font.css" rel="stylesheet">
+<link href="../deps/Source_Sans_Pro-0.4.9/font.css" rel="stylesheet">
+<link href="../deps/font-awesome-6.4.2/css/all.min.css" rel="stylesheet">
+<link href="../deps/font-awesome-6.4.2/css/v4-shims.min.css" rel="stylesheet">
+<script src="../deps/headroom-0.11.0/headroom.min.js"></script><script src="../deps/headroom-0.11.0/jQuery.headroom.min.js"></script><script src="../deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js"></script><script src="../deps/clipboard.js-2.0.11/clipboard.min.js"></script><script src="../deps/search-1.0.0/autocomplete.jquery.min.js"></script><script src="../deps/search-1.0.0/fuse.min.js"></script><script src="../deps/search-1.0.0/mark.min.js"></script><!-- pkgdown --><script src="../pkgdown.js"></script><meta property="og:title" content="About the Logomark">
+</head>
+<body>
+    <a href="#main" class="visually-hidden-focusable">Skip to contents</a>
+
+
+    <nav class="navbar navbar-expand-lg fixed-top bg-none" data-bs-theme="light" aria-label="Site navigation"><div class="container">
+
+    <a class="navbar-brand me-2" href="../index.html">eunis.habitats</a>
+
+    <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">0.1.0</small>
+
+
+    <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
+      <span class="navbar-toggler-icon"></span>
+    </button>
+
+    <div id="navbar" class="collapse navbar-collapse ms-3">
+      <ul class="navbar-nav me-auto">
+<li class="nav-item"><a class="nav-link" href="../articles/eunis-classification.html">EUNIS Classification</a></li>
+<li class="nav-item"><a class="nav-link" href="../articles/crosswalks.html">Crosswalks</a></li>
+<li class="nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li>
+<li class="nav-item"><a class="nav-link" href="../news/index.html">Changelog</a></li>
+      </ul>
+<ul class="navbar-nav">
+<li class="nav-item"><form class="form-inline" role="search">
+ <input class="form-control" type="search" name="search-input" id="search-input" autocomplete="off" aria-label="Search site" placeholder="Search for" data-search-index="../search.json">
+</form></li>
+<li class="nav-item"><a class="external-link nav-link" href="https://github.com/patterninstitute/eunis.habitats/" aria-label="GitHub"><span class="fa fab fa-github fa-lg"></span></a></li>
+      </ul>
+</div>
+
+
+  </div>
+</nav><div class="container template-article">
+
+
+
+
+<div class="row">
+  <main id="main" class="col-md-9"><div class="page-header">
+      <img src="../logo.svg" class="logo" alt=""><h1>About the Logomark</h1>
+            
+      
+      <small class="dont-index">Source: <a href="https://github.com/patterninstitute/eunis.habitats/blob/main/vignettes/articles/logo.Rmd" class="external-link"><code>vignettes/articles/logo.Rmd</code></a></small>
+      <div class="d-none name"><code>logo.Rmd</code></div>
+    </div>
+
+    
+    
+<div class="section level2">
+<h2 id="original">Original<a class="anchor" aria-label="anchor" href="#original"></a>
+</h2>
+<p>Source: <a href="https://flora-on.pt/#/h2eJ7" class="external-link uri">https://flora-on.pt/#/h2eJ7</a>.</p>
+<p><img src="Aster-aragonensis-MPorto.jpg" alt="Aster aragonensis MPorto" width="500"></p>
+<p>The hex logo for this package is a derivative work based on this
+photograph of an <em>Aster aragonensis</em> flower by botanist <a href="https://github.com/miguel-porto" class="external-link">Miguel Porto</a>, sourced from <a href="https://flora-on.pt/" class="external-link">Flora-On</a>, and is licensed under the
+Creative Commons Attribution-NonCommercial 4.0 International License (<a href="https://creativecommons.org/licenses/by-nc/4.0/" class="external-link">CC BY-NC
+4.0</a>).</p>
+</div>
+<div class="section level2">
+<h2 id="logomark">Logomark<a class="anchor" aria-label="anchor" href="#logomark"></a>
+</h2>
+<p>Source: <a href="https://www.pattern.institute/eunis.habitats/logo.svg" class="uri">https://www.pattern.institute/eunis.habitats/logo.svg</a>.</p>
+<p><img src="https://www.pattern.institute/eunis.habitats/logo.svg" alt="eunis.habitats logo" width="500"></p>
+<p>The logomark is a cropped version of the original photograph, adapted
+to fit a hexagonal shape.</p>
+<p>This means you are free to share and adapt the logomark for
+non-commercial purposes as long as you give appropriate credit to the
+original creator, link to the license, and indicate if changes were
+made. It also implies you cannot use the material for commercial
+purposes, nor can you apply legal terms or technological measures that
+legally restrict others from doing anything the license permits.</p>
+</div>
+  </main><aside class="col-md-3"><nav id="toc" aria-label="Table of contents"><h2>On this page</h2>
+    </nav></aside>
+</div>
+
+
+
+    <footer><div class="pkgdown-footer-left">
+  <p>Developed by <a href="https://www.pattern.institute/team/rmagno" class="external-link">Ramiro Magno</a>, <a href="https://www.pattern.institute/" class="external-link">Pattern Institute</a>, <a href="https://www.ccmar.ualg.pt/" class="external-link"><img src="https://www.pattern.institute/eunis.habitats/reference/figures/ccmar-logotype.svg" height="24" alt="ccmar"></a>.</p>
+</div>
+
+<div class="pkgdown-footer-right">
+
+</div>
+
+    </footer>
+</div>
+
+
+
+
+
+  </body>
+</html>
diff --git a/index.html b/index.html
index eb63be3..7fedbf3 100644
--- a/index.html
+++ b/index.html
@@ -84,7 +84,7 @@ <h2 id="eunis-classifications">EUNIS classifications<a class="anchor" aria-label
 <li>EUNIS marine classification from 2022</li>
 <li>EUNIS terrestrial classification from 2021</li>
 </ol>
-<p>See <code>vignette("eunis-classification")</code> to learn more.</p>
+<p>See <a href="https://www.pattern.institute/eunis.habitats/articles/eunis-classification.html"><code>vignette("eunis-classification")</code></a> to learn more.</p>
 </div>
 <div class="section level2">
 <h2 id="crosswalks">Crosswalks<a class="anchor" aria-label="anchor" href="#crosswalks"></a>
@@ -95,7 +95,7 @@ <h2 id="crosswalks">Crosswalks<a class="anchor" aria-label="anchor" href="#cross
 <li>European Red List of Habitats</li>
 <li>Habitats Directive Annex I</li>
 </ul>
-<p>See <code>vignette("crosswalks")</code> for more details.</p>
+<p>See <a href="https://www.pattern.institute/eunis.habitats/articles/crosswalks.html"><code>vignette("crosswalks")</code></a> for more details.</p>
 </div>
 </div>
   </main><aside class="col-md-3"><div class="links">
@@ -104,7 +104,7 @@ <h2 data-toc-skip>Links</h2>
 <li><a href="https://cloud.r-project.org/package=eunis.habitats" class="external-link">View on CRAN</a></li>
 <li><a href="https://github.com/patterninstitute/eunis.habitats/" class="external-link">Browse source code</a></li>
 <li><a href="https://github.com/patterninstitute/eunis.habitats/issues" class="external-link">Report a bug</a></li>
-<li><a href="https://www.eea.europa.eu/data-and-maps/data/eunis-habitat-classification-1/" class="external-link">EUNIS habitat classification</a></li>
+<li><a href="articles/logo.html">About the logomark</a></li>
 </ul>
 </div>
 
diff --git a/pkgdown.yml b/pkgdown.yml
index 0c8cbfc..8f5e5da 100644
--- a/pkgdown.yml
+++ b/pkgdown.yml
@@ -4,7 +4,8 @@ pkgdown_sha: ~
 articles:
   articles/crosswalks: crosswalks.html
   articles/eunis-classification: eunis-classification.html
-last_built: 2024-08-06T16:00Z
+  articles/logo: logo.html
+last_built: 2024-08-06T17:36Z
 urls:
   reference: https://www.pattern.institute/eunis.habitats/reference
   article: https://www.pattern.institute/eunis.habitats/articles
diff --git a/search.json b/search.json
index 866adf8..5981c6d 100644
--- a/search.json
+++ b/search.json
@@ -1 +1 @@
-[{"path":[]},{"path":"https://www.pattern.institute/eunis.habitats/LICENSE.html","id":null,"dir":"","previous_headings":"","what":"CC0 1.0 Universal","title":"CC0 1.0 Universal","text":"CREATIVE COMMONS CORPORATION LAW FIRM PROVIDE LEGAL SERVICES. DISTRIBUTION DOCUMENT CREATE ATTORNEY-CLIENT RELATIONSHIP. CREATIVE COMMONS PROVIDES INFORMATION “-” BASIS. CREATIVE COMMONS MAKES WARRANTIES REGARDING USE DOCUMENT INFORMATION WORKS PROVIDED HEREUNDER, DISCLAIMS LIABILITY DAMAGES RESULTING USE DOCUMENT INFORMATION WORKS PROVIDED HEREUNDER.","code":""},{"path":"https://www.pattern.institute/eunis.habitats/LICENSE.html","id":"statement-of-purpose","dir":"","previous_headings":"","what":"Statement of Purpose","title":"CC0 1.0 Universal","text":"laws jurisdictions throughout world automatically confer exclusive Copyright Related Rights (defined ) upon creator subsequent owner(s) (, “owner”) original work authorship /database (, “Work”). Certain owners wish permanently relinquish rights Work purpose contributing commons creative, cultural scientific works (“Commons”) public can reliably without fear later claims infringement build upon, modify, incorporate works, reuse redistribute freely possible form whatsoever purposes, including without limitation commercial purposes. owners may contribute Commons promote ideal free culture production creative, cultural scientific works, gain reputation greater distribution Work part use efforts others. /purposes motivations, without expectation additional consideration compensation, person associating CC0 Work (“Affirmer”), extent owner Copyright Related Rights Work, voluntarily elects apply CC0 Work publicly distribute Work terms, knowledge Copyright Related Rights Work meaning intended legal effect CC0 rights. Copyright Related Rights. Work made available CC0 may protected copyright related neighboring rights (“Copyright Related Rights”). Copyright Related Rights include, limited , following: right reproduce, adapt, distribute, perform, display, communicate, translate Work; moral rights retained original author(s) /performer(s); publicity privacy rights pertaining person’s image likeness depicted Work; rights protecting unfair competition regards Work, subject limitations paragraph 4(), ; rights protecting extraction, dissemination, use reuse data Work; database rights (arising Directive 96/9/EC European Parliament Council 11 March 1996 legal protection databases, national implementation thereof, including amended successor version directive); similar, equivalent corresponding rights throughout world based applicable law treaty, national implementations thereof. Waiver. greatest extent permitted , contravention , applicable law, Affirmer hereby overtly, fully, permanently, irrevocably unconditionally waives, abandons, surrenders Affirmer’s Copyright Related Rights associated claims causes action, whether now known unknown (including existing well future claims causes action), Work () territories worldwide, (ii) maximum duration provided applicable law treaty (including future time extensions), (iii) current future medium number copies, (iv) purpose whatsoever, including without limitation commercial, advertising promotional purposes (“Waiver”). Affirmer makes Waiver benefit member public large detriment Affirmer’s heirs successors, fully intending Waiver shall subject revocation, rescission, cancellation, termination, legal equitable action disrupt quiet enjoyment Work public contemplated Affirmer’s express Statement Purpose. Public License Fallback. part Waiver reason judged legally invalid ineffective applicable law, Waiver shall preserved maximum extent permitted taking account Affirmer’s express Statement Purpose. addition, extent Waiver judged Affirmer hereby grants affected person royalty-free, non transferable, non sublicensable, non exclusive, irrevocable unconditional license exercise Affirmer’s Copyright Related Rights Work () territories worldwide, (ii) maximum duration provided applicable law treaty (including future time extensions), (iii) current future medium number copies, (iv) purpose whatsoever, including without limitation commercial, advertising promotional purposes (“License”). License shall deemed effective date CC0 applied Affirmer Work. part License reason judged legally invalid ineffective applicable law, partial invalidity ineffectiveness shall invalidate remainder License, case Affirmer hereby affirms () exercise remaining Copyright Related Rights Work (ii) assert associated claims causes action respect Work, either case contrary Affirmer’s express Statement Purpose. Limitations Disclaimers. trademark patent rights held Affirmer waived, abandoned, surrendered, licensed otherwise affected document. Affirmer offers Work -makes representations warranties kind concerning Work, express, implied, statutory otherwise, including without limitation warranties title, merchantability, fitness particular purpose, non infringement, absence latent defects, accuracy, present absence errors, whether discoverable, greatest extent permissible applicable law. Affirmer disclaims responsibility clearing rights persons may apply Work use thereof, including without limitation person’s Copyright Related Rights Work. , Affirmer disclaims responsibility obtaining necessary consents, permissions rights required use Work. Affirmer understands acknowledges Creative Commons party document duty obligation respect CC0 use Work.","code":""},{"path":"https://www.pattern.institute/eunis.habitats/SUPPORT.html","id":null,"dir":"","previous_headings":"","what":"Getting help","title":"Getting help","text":"Thank using eunis.habitats! GitHub account, please file issue question bug report. GitHub account, can contact Ramiro Magno, maintainer package rmagno@pattern.institute.","code":""},{"path":"https://www.pattern.institute/eunis.habitats/articles/crosswalks.html","id":"from-eunis-2012-to-eunis-marine-2022","dir":"Articles","previous_headings":"","what":"From EUNIS 2012 to EUNIS Marine 2022","title":"Crosswalk of Habitat Codes","text":"","code":"crosswalk(   code = c(\"A3.4\", \"A3.5\"),   from = \"EUNIS_2012\",   to = \"EUNIS_M_2022\",   unnest = TRUE ) #> # A tibble: 64 × 2 #>    eunis_2012_code eunis_m_2022_code #>    <chr>           <chr>             #>  1 A3.4            MA133             #>  2 A3.4            MA134             #>  3 A3.4            MA135             #>  4 A3.4            MA136             #>  5 A3.4            MA137             #>  6 A3.4            MB13              #>  7 A3.4            MB131             #>  8 A3.4            MB1311            #>  9 A3.4            MB1312            #> 10 A3.4            MB1313            #> # ℹ 54 more rows"},{"path":"https://www.pattern.institute/eunis.habitats/articles/crosswalks.html","id":"from-eunis-marine-2019-to-eunis-2012","dir":"Articles","previous_headings":"","what":"From EUNIS Marine 2019 to EUNIS 2012","title":"Crosswalk of Habitat Codes","text":"","code":"crosswalk(   code = c(\"MH152\", \"MH2331\"),   from = \"EUNIS_M_2019\",   to = \"EUNIS_2012\",   unnest = TRUE ) #> # A tibble: 2 × 2 #>   eunis_m_2019_code eunis_2012_code #>   <chr>             <chr>           #> 1 MH152             A7.12           #> 2 MH2331            A7.231"},{"path":"https://www.pattern.institute/eunis.habitats/articles/crosswalks.html","id":"from-eunis-marine-2022-to-the-european-red-list-of-habitats","dir":"Articles","previous_headings":"","what":"From EUNIS Marine 2022 to the European Red List of Habitats","title":"Crosswalk of Habitat Codes","text":"","code":"crosswalk(   code = c(\"MH152\", \"MH2331\", \"MA146\", \"MD55\"),   from = \"EUNIS_M_2022\",   to = \"RL\",   unnest = TRUE ) #> # A tibble: 4 × 2 #>   eunis_m_2022_code rl_code #>   <chr>             <chr>   #> 1 MH152             NA      #> 2 MH2331            NA      #> 3 MA146             A1.1xx  #> 4 MD55              A5.27"},{"path":"https://www.pattern.institute/eunis.habitats/articles/crosswalks.html","id":"one-to-many-mappings","dir":"Articles","previous_headings":"","what":"One to many mappings","title":"Crosswalk of Habitat Codes","text":"Note mappings one many, e.g. \"MA12\" EUNIS Marine 2019 maps following Habitats Directive Annex habitat codes: \"8330\", \"1160\", \"1170\" \"1130\". , default, column list-column. need use unnest = TRUE flatten table mappings convert list-column character vector column.","code":"crosswalk(   code = c(\"M\", \"MA1\", \"MA11\", \"MA12\"),   from = \"EUNIS_M_2019\",   to = \"Annex_I\" ) #> # A tibble: 4 × 2 #>   eunis_m_2019_code annex_i_code #>   <chr>             <list>       #> 1 M                 <chr [1]>    #> 2 MA1               <chr [1]>    #> 3 MA11              <chr [1]>    #> 4 MA12              <chr [4]> crosswalk(   code = c(\"M\", \"MA1\", \"MA11\", \"MA12\"),   from = \"EUNIS_M_2019\",   to = \"Annex_I\",   unnest = TRUE ) #> # A tibble: 7 × 2 #>   eunis_m_2019_code annex_i_code #>   <chr>             <chr>        #> 1 M                 NA           #> 2 MA1               NA           #> 3 MA11              NA           #> 4 MA12              8330         #> 5 MA12              1160         #> 6 MA12              1170         #> 7 MA12              1130"},{"path":"https://www.pattern.institute/eunis.habitats/articles/eunis-classification.html","id":"eunis-four-classifications","dir":"Articles","previous_headings":"","what":"EUNIS four classifications","title":"EUNIS Classification Systems","text":"eunis_habitats data set comprises four habitat classifications: EUNIS classification 2007, revised 2012. EUNIS marine classification 2019. EUNIS marine classification 2022. EUNIS terrestrial classification 2021. column classification distinguishes : example, access level 1 marine habitats classified according EUNIS revision 2022 (\"EUNIS_M_2022\"): list ice habitats (level 2):","code":"dplyr::distinct(eunis_habitats, classification) #> # A tibble: 4 × 1 #>   classification #>   <chr>          #> 1 EUNIS_2012     #> 2 EUNIS_M_2019   #> 3 EUNIS_M_2022   #> 4 EUNIS_T_2021 dplyr::filter(eunis_habitats, classification == \"EUNIS_M_2022\", level == 1L) #> # A tibble: 3 × 8 #>   classification section version group   level code  name            description #>   <chr>          <chr>   <chr>   <chr>   <int> <chr> <chr>           <chr>       #> 1 EUNIS_M_2022   marine  2022    benthic     1 M     Marine benthic… Marine ben… #> 2 EUNIS_M_2022   marine  2022    pelagic     1 MH    Pelagic water … The water … #> 3 EUNIS_M_2022   marine  2022    ice         1 MJ    Ice-associated… Sea ice, i… dplyr::filter(eunis_habitats,               classification == \"EUNIS_M_2022\",               group == \"ice\",               level == 2L) |>   dplyr::select(\"code\", \"name\") #> # A tibble: 4 × 2 #>   code  name              #>   <chr> <chr>             #> 1 MJ1   Sea ice           #> 2 MJ2   Freshwater ice    #> 3 MJ3   Brine channels    #> 4 MJ4   Under-ice habitat"},{"path":"https://www.pattern.institute/eunis.habitats/authors.html","id":null,"dir":"","previous_headings":"","what":"Authors","title":"Authors and Citation","text":"Ramiro Magno. Author, maintainer. Pedro Monteiro. Contributor. Luís Bentes. Contributor. Pattern Institute. Copyright holder, funder. . Funder.","code":""},{"path":"https://www.pattern.institute/eunis.habitats/authors.html","id":"citation","dir":"","previous_headings":"","what":"Citation","title":"Authors and Citation","text":"Magno R (2024). eunis.habitats: EUNIS Habitat Classification. R package version 0.1.0, https://www.pattern.institute/eunis.habitats/, https://github.com/patterninstitute/eunis.habitats.","code":"@Manual{,   title = {eunis.habitats: EUNIS Habitat Classification},   author = {Ramiro Magno},   year = {2024},   note = {R package version 0.1.0, https://www.pattern.institute/eunis.habitats/},   url = {https://github.com/patterninstitute/eunis.habitats}, }"},{"path":"https://www.pattern.institute/eunis.habitats/index.html","id":"eunishabitats-","dir":"","previous_headings":"","what":"EUNIS Habitat Classification","title":"EUNIS Habitat Classification","text":"eunis.habitats R data package provides EUNIS habitat classification tidy format.","code":""},{"path":"https://www.pattern.institute/eunis.habitats/index.html","id":"installation","dir":"","previous_headings":"","what":"Installation","title":"EUNIS Habitat Classification","text":"Install CRAN:","code":"install.packages(\"eunis.habitats\")"},{"path":"https://www.pattern.institute/eunis.habitats/index.html","id":"eunis-classifications","dir":"","previous_headings":"","what":"EUNIS classifications","title":"EUNIS Habitat Classification","text":"data set eunis_habitats provides four EUNIS classifications: EUNIS classification 2007, revised 2012. EUNIS marine classification 2019 EUNIS marine classification 2022 EUNIS terrestrial classification 2021 See vignette(\"eunis-classification\") learn .","code":""},{"path":"https://www.pattern.institute/eunis.habitats/index.html","id":"crosswalks","dir":"","previous_headings":"","what":"Crosswalks","title":"EUNIS Habitat Classification","text":"Use helper crosswalk() map habitat codes across classification systems: EUNIS habitat classifications European Red List Habitats Habitats Directive Annex See vignette(\"crosswalks\") details.","code":""},{"path":"https://www.pattern.institute/eunis.habitats/reference/crosswalk.html","id":null,"dir":"Reference","previous_headings":"","what":"Convert habitat codes — crosswalk","title":"Convert habitat codes — crosswalk","text":"Convert (crosswalk) habitat codes , , following habitat classification systems: EUNIS habitat classification: \"EUNIS_2012\", \"EUNIS_M_2019\", \"EUNIS_M_2022\" \"EUNIS_T_2021\". See eunis_habitats habitat codes, names descriptions. European Red List Habitats: \"RL\". Habitats Directive Annex : \"Annex_I\". Note pairwise combinations available. possibilities originally provided EUNIS raw data.","code":""},{"path":"https://www.pattern.institute/eunis.habitats/reference/crosswalk.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Convert habitat codes — crosswalk","text":"","code":"crosswalk(code, from, to, unnest = FALSE)"},{"path":"https://www.pattern.institute/eunis.habitats/reference/crosswalk.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Convert habitat codes — crosswalk","text":"code character vector habitat codes. values existing codes classification system indicated parameter. source classification system. one : \"EUNIS_2012\", \"EUNIS_M_2019\", \"EUNIS_M_2022\", \"EUNIS_T_2021\", \"RL\" \"Annex_I\". target classification system. Also, one options indicated parameter description. unnest Whether unnest \"\" column output. Note unnest number rows output (potentially) greater number habitat codes provided parameter code, meaning one--many crosswalks one row .","code":""},{"path":"https://www.pattern.institute/eunis.habitats/reference/crosswalk.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Convert habitat codes — crosswalk","text":"tibble two variables codes, respectively. actual column names vary according specific crosswalk queried, see Examples.","code":""},{"path":"https://www.pattern.institute/eunis.habitats/reference/crosswalk.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Convert habitat codes — crosswalk","text":"","code":"# From EUNIS 2012 to EUNIS Marine 2022 crosswalk(   code = c(\"A3.4\", \"A3.5\"),   from = \"EUNIS_2012\",   to = \"EUNIS_M_2022\",   unnest = TRUE ) #> # A tibble: 64 × 2 #>    eunis_2012_code eunis_m_2022_code #>    <chr>           <chr>             #>  1 A3.4            MA133             #>  2 A3.4            MA134             #>  3 A3.4            MA135             #>  4 A3.4            MA136             #>  5 A3.4            MA137             #>  6 A3.4            MB13              #>  7 A3.4            MB131             #>  8 A3.4            MB1311            #>  9 A3.4            MB1312            #> 10 A3.4            MB1313            #> # ℹ 54 more rows  # From EUNIS Marine 2019 to EUNIS 2012 crosswalk( code = c(\"MH152\", \"MH2331\"), from = \"EUNIS_M_2019\", to = \"EUNIS_2012\", unnest = TRUE ) #> # A tibble: 2 × 2 #>   eunis_m_2019_code eunis_2012_code #>   <chr>             <chr>           #> 1 MH152             A7.12           #> 2 MH2331            A7.231           # From EUNIS Marine 2022 to Red List crosswalk( code = c(\"MH152\", \"MH2331\", \"MA146\", \"MD55\"), from = \"EUNIS_M_2022\", to = \"RL\", unnest = TRUE ) #> # A tibble: 4 × 2 #>   eunis_m_2022_code rl_code #>   <chr>             <chr>   #> 1 MH152             NA      #> 2 MH2331            NA      #> 3 MA146             A1.1xx  #> 4 MD55              A5.27    # From EUNIS Marine 2019 to Annex I crosswalk( code = c(\"M\", \"MA1\", \"MA11\", \"MA12\"), from = \"EUNIS_M_2019\", to = \"Annex_I\", unnest = TRUE ) #> # A tibble: 7 × 2 #>   eunis_m_2019_code annex_i_code #>   <chr>             <chr>        #> 1 M                 NA           #> 2 MA1               NA           #> 3 MA11              NA           #> 4 MA12              8330         #> 5 MA12              1160         #> 6 MA12              1170         #> 7 MA12              1130          # From Annex I to EUNIS Marine 2019 crosswalk( code = c(\"8330\", \"1160\"), from = \"Annex_I\", to = \"EUNIS_M_2019\", unnest = TRUE ) #> # A tibble: 966 × 2 #>    annex_i_code eunis_m_2019_code #>    <chr>        <chr>             #>  1 8330         MA12              #>  2 8330         MA127             #>  3 8330         MA1271            #>  4 8330         MA1272            #>  5 8330         MA1273            #>  6 8330         MA1274            #>  7 8330         MA1275            #>  8 8330         MA1276            #>  9 8330         MA12761           #> 10 8330         MA1277            #> # ℹ 956 more rows  # From EUNIS Terrestrial 2021 to Annex I crosswalk( code = c(\"U51\", \"U72\", \"Q25\"), from = \"EUNIS_T_2021\", to = \"Annex_I\", unnest = TRUE ) #> # A tibble: 6 × 2 #>   eunis_t_2021_code annex_i_code #>   <chr>             <chr>        #> 1 U72               3250         #> 2 U72               3280         #> 3 U72               3290         #> 4 Q25               7140         #> 5 Q25               7130         #> 6 U51               NA            # From Annex I to EUNIS Terrestrial 2021 crosswalk(   code = c(\"91E0\", \"92A0\", \"9030\"),   from = \"Annex_I\",   to = \"EUNIS_T_2021\", unnest = TRUE   ) #> # A tibble: 6 × 2 #>   annex_i_code eunis_t_2021_code #>   <chr>        <chr>             #> 1 92A0         T11               #> 2 92A0         T14               #> 3 9030         T12               #> 4 9030         T1C               #> 5 91E0         T11               #> 6 91E0         T12"},{"path":"https://www.pattern.institute/eunis.habitats/reference/eunis.habitats-package.html","id":null,"dir":"Reference","previous_headings":"","what":"eunis.habitats: EUNIS Habitat Classification — eunis.habitats-package","title":"eunis.habitats: EUNIS Habitat Classification — eunis.habitats-package","text":"EUNIS habitat classification comprehensive pan-European system habitat identification https://www.eea.europa.eu/data--maps/data/eunis-habitat-classification-1. R data package providing EUNIS classification system. classification hierarchical covers types habitats natural artificial, terrestrial freshwater marine. habitat types identified specific codes, names descriptions come schema crosswalks habitat typologies.","code":""},{"path":[]},{"path":"https://www.pattern.institute/eunis.habitats/reference/eunis.habitats-package.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"eunis.habitats: EUNIS Habitat Classification — eunis.habitats-package","text":"Maintainer: Ramiro Magno rmagno@pattern.institute (ORCID) contributors: Pedro Monteiro pmontei@ualg.pt (ORCID) [contributor] Luís Bentes lbentes@ualg.pt (ORCID) [contributor] Pattern Institute [copyright holder, funder] CCMAR [funder]","code":""},{"path":"https://www.pattern.institute/eunis.habitats/reference/eunis_habitats.html","id":null,"dir":"Reference","previous_headings":"","what":"EUNIS Habitats — eunis_habitats","title":"EUNIS Habitats — eunis_habitats","text":"data set EUNIS habitats. row habitat. EUNIS habitat classification comprehensive pan-European system habitat identification. classification hierarchical covers types habitats natural artificial, terrestrial freshwater marine. habitat types identified specific codes, names descriptions come cross-walks habitat typologies. See crosswalk() mapping habitat classification systems.","code":""},{"path":"https://www.pattern.institute/eunis.habitats/reference/eunis_habitats.html","id":"format","dir":"Reference","previous_headings":"","what":"Format","title":"EUNIS Habitats — eunis_habitats","text":"tibble eight variables: classification Classification identifier. Identifies one four habitat classifications. section Component EUNIS classification: \"marine\" \"terrestrial\". version Classification version. group Habitat group. level Habitat level. code Habitat code. name Habitat name. description Habitat description.","code":""},{"path":"https://www.pattern.institute/eunis.habitats/reference/eunis_habitats.html","id":"source","dir":"Reference","previous_headings":"","what":"Source","title":"EUNIS Habitats — eunis_habitats","text":"https://www.eea.europa.eu/data--maps/data/eunis-habitat-classification-1","code":""},{"path":[]},{"path":"https://www.pattern.institute/eunis.habitats/reference/eunis_habitats.html","id":"eunis-","dir":"Reference","previous_headings":"","what":"EUNIS 2012","title":"EUNIS Habitats — eunis_habitats","text":"full list EUNIS habitats 2012: codes, scientific names revised descriptions. habitat descriptions EUNIS classification 2007 revised 2012. 2007 habitat types changed 2012 description revision mostly replaced Palaearctic UK Marine habitat classification codes used habitat descriptions levels 5 EUNIS classification equivalents. 2019 classification amended include two new habitats revised Resolution 4 Bern Convention adopted 38th Standing Committee meeting, November 2018. two habitats G3.4G Pinus sylvestris forest chalk steppe zone X36 Depressions (pody) Steppe zone.","code":""},{"path":"https://www.pattern.institute/eunis.habitats/reference/eunis_habitats.html","id":"eunis-marine-","dir":"Reference","previous_headings":"","what":"EUNIS Marine 2019","title":"EUNIS Habitats — eunis_habitats","text":"revision EUNIS marine habitat classification published 2019. June 2021 classification complemented crosswalks Habitats Directive Annex European Red List Habitats. updated version published March 2022. Users change 2022 version earliest convenience.","code":""},{"path":"https://www.pattern.institute/eunis.habitats/reference/eunis_habitats.html","id":"eunis-marine--1","dir":"Reference","previous_headings":"","what":"EUNIS Marine 2022","title":"EUNIS Habitats — eunis_habitats","text":"review marine component EUNIS habitat classification initiated 2014. Marine benthic habitats, marine pelagic marine ice associated habitats separated three distinct groups, separate classification structure. first major division benthic marine part EUNIS classification based major biological zones (related depth) substrate type. Level 3 classification reflects main biogeographical regions Europe’s seas based distinct combinations salinity temperature regimes (Arctic, Baltic, Atlantic, Mediterranean Black Sea). first review published 2019 update version concerning mostly Atlantic regional sea available since March 2022. Crosswalks Habitats Directive Annex European Red List Habitats available crosswalks EUNIS marine habitats version 2012 regional seas apart Atlantic need revisited.","code":""},{"path":"https://www.pattern.institute/eunis.habitats/reference/eunis_habitats.html","id":"eunis-terrestrial-","dir":"Reference","previous_headings":"","what":"EUNIS Terrestrial 2021","title":"EUNIS Habitats — eunis_habitats","text":"review terrestrial component EUNIS habitat classification initiated 2015. review concerns groups coastal habitats, grasslands, heathland, forest, sparsely vegetated vegetated man-made habitats. review updated January 2023 corrections existing groups inclusion wetlands additional crosslinks. remaining groups revised published later stage. classification includes cross-walks level 3 Habitats Directive Annex , European Red List Habitats, Bern Convention Resolution 4 habitats, MAES IUCN ecosystems, Corine Land Cover classes Euroveg Checklist 2016 Syntaxa. groups forest heathland include also crosswalks earlier revision groups published 2017. Habitats level 3 complemented lists characteristic species identified EVA database.","code":""},{"path":"https://www.pattern.institute/eunis.habitats/reference/eunis_habitats.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"EUNIS Habitats — eunis_habitats","text":"","code":"# EUNIS 2012 subset(eunis_habitats, classification == \"EUNIS_2012\") #> # A tibble: 5,285 × 8 #>    classification section version group level code    name           description #>    <chr>          <chr>   <chr>   <chr> <int> <chr>   <chr>          <chr>       #>  1 EUNIS_2012     NA      2012    NA        1 A       Marine habita… \"Marine ha… #>  2 EUNIS_2012     NA      2012    NA        2 A1      Littoral rock… \"Littoral … #>  3 EUNIS_2012     NA      2012    NA        3 A1.1    High energy l… \"Extremely… #>  4 EUNIS_2012     NA      2012    NA        4 A1.11   Mussel and/or… \"Communiti… #>  5 EUNIS_2012     NA      2012    NA        5 A1.111  [Mytilus edul… \"On very e… #>  6 EUNIS_2012     NA      2012    NA        5 A1.112  [Chthamalus] … \"Very expo… #>  7 EUNIS_2012     NA      2012    NA        6 A1.1121 [Chthamalus m… \"Very expo… #>  8 EUNIS_2012     NA      2012    NA        6 A1.1122 [Chthamalus] … \"Areas of … #>  9 EUNIS_2012     NA      2012    NA        5 A1.113  [Semibalanus … \"Exposed t… #> 10 EUNIS_2012     NA      2012    NA        6 A1.1131 [Semibalanus … \"Very expo… #> # ℹ 5,275 more rows  # EUNIS Marine 2019 subset(eunis_habitats, classification == \"EUNIS_M_2019\") #> # A tibble: 1,939 × 8 #>    classification section version group   level code    name         description #>    <chr>          <chr>   <chr>   <chr>   <int> <chr>   <chr>        <chr>       #>  1 EUNIS_M_2019   marine  2019    benthic     1 M       Marine bent… \"Marine be… #>  2 EUNIS_M_2019   marine  2019    benthic     2 MA1     Littoral ro… \"Littoral … #>  3 EUNIS_M_2019   marine  2019    benthic     3 MA11    Arctic litt… \"Arctic li… #>  4 EUNIS_M_2019   marine  2019    benthic     3 MA12    Atlantic li… \"Atlantic … #>  5 EUNIS_M_2019   marine  2019    benthic     4 MA121   Lichens or … \"Lichen co… #>  6 EUNIS_M_2019   marine  2019    benthic     5 MA1211  Yellow and … \"Vertical … #>  7 EUNIS_M_2019   marine  2019    benthic     5 MA1212  Prasiola st… \"Exposed t… #>  8 EUNIS_M_2019   marine  2019    benthic     5 MA1213  Verrucaria … \"Bedrock o… #>  9 EUNIS_M_2019   marine  2019    benthic     6 MA12131 Verrucaria … \"The litto… #> 10 EUNIS_M_2019   marine  2019    benthic     6 MA12132 Verrucaria … \"Upper lit… #> # ℹ 1,929 more rows  # EUNIS Marine 2022 subset(eunis_habitats, classification == \"EUNIS_M_2022\") #> # A tibble: 1,942 × 8 #>    classification section version group   level code    name         description #>    <chr>          <chr>   <chr>   <chr>   <int> <chr>   <chr>        <chr>       #>  1 EUNIS_M_2022   marine  2022    benthic     1 M       Marine bent… \"Marine be… #>  2 EUNIS_M_2022   marine  2022    benthic     2 MA1     Littoral ro… \"Littoral … #>  3 EUNIS_M_2022   marine  2022    benthic     3 MA11    Arctic litt… \"Arctic li… #>  4 EUNIS_M_2022   marine  2022    benthic     3 MA12    Atlantic li… \"Atlantic … #>  5 EUNIS_M_2022   marine  2022    benthic     4 MA121   Lichens or … \"Lichen co… #>  6 EUNIS_M_2022   marine  2022    benthic     5 MA1211  Yellow and … \"Vertical … #>  7 EUNIS_M_2022   marine  2022    benthic     5 MA1212  Prasiola st… \"Exposed t… #>  8 EUNIS_M_2022   marine  2022    benthic     5 MA1213  Verrucaria … \"Bedrock o… #>  9 EUNIS_M_2022   marine  2022    benthic     6 MA12131 Verrucaria … \"The litto… #> 10 EUNIS_M_2022   marine  2022    benthic     6 MA12132 Verrucaria … \"Upper lit… #> # ℹ 1,932 more rows  # EUNIS Terrestrial 2021 subset(eunis_habitats, classification == \"EUNIS_T_2021\") #> # A tibble: 3,949 × 8 #>    classification section     version group   level code  name       description #>    <chr>          <chr>       <chr>   <chr>   <int> <chr> <chr>      <chr>       #>  1 EUNIS_T_2021   terrestrial 2021_1  coastal     1 N     Coastal h… Coastal ha… #>  2 EUNIS_T_2021   terrestrial 2021_1  coastal     2 N1    Coastal d… Sand-cover… #>  3 EUNIS_T_2021   terrestrial 2021_1  coastal     3 N11   Atlantic,… Atlantic, … #>  4 EUNIS_T_2021   terrestrial 2021_1  coastal     4 N111  Boreo-Arc… Annual com… #>  5 EUNIS_T_2021   terrestrial 2021_1  coastal     4 N112  Middle Eu… Annual hal… #>  6 EUNIS_T_2021   terrestrial 2021_1  coastal     5 N1121 Baltic sa… Annual dri… #>  7 EUNIS_T_2021   terrestrial 2021_1  coastal     4 N113  Unvegetat… Sandy beac… #>  8 EUNIS_T_2021   terrestrial 2021_1  coastal     5 N1131 Baltic un… No descrip… #>  9 EUNIS_T_2021   terrestrial 2021_1  coastal     5 N1132 Baltic un… No descrip… #> 10 EUNIS_T_2021   terrestrial 2021_1  coastal     4 N114  Biocenosi… Area corre… #> # ℹ 3,939 more rows"},{"path":"https://www.pattern.institute/eunis.habitats/news/index.html","id":"eunishabitats-010","dir":"Changelog","previous_headings":"","what":"eunis.habitats 0.1.0","title":"eunis.habitats 0.1.0","text":"CRAN release: 2023-07-11 Added NEWS.md file track changes package.","code":""}]
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GitHub account, can contact Ramiro Magno, maintainer package rmagno@pattern.institute.","code":""},{"path":"https://www.pattern.institute/eunis.habitats/articles/crosswalks.html","id":"from-eunis-2012-to-eunis-marine-2022","dir":"Articles","previous_headings":"","what":"From EUNIS 2012 to EUNIS Marine 2022","title":"Crosswalk of Habitat Codes","text":"","code":"crosswalk(   code = c(\"A3.4\", \"A3.5\"),   from = \"EUNIS_2012\",   to = \"EUNIS_M_2022\",   unnest = TRUE ) #> # A tibble: 64 × 2 #>    eunis_2012_code eunis_m_2022_code #>    <chr>           <chr>             #>  1 A3.4            MA133             #>  2 A3.4            MA134             #>  3 A3.4            MA135             #>  4 A3.4            MA136             #>  5 A3.4            MA137             #>  6 A3.4            MB13              #>  7 A3.4            MB131             #>  8 A3.4            MB1311            #>  9 A3.4            MB1312            #> 10 A3.4            MB1313            #> # ℹ 54 more rows"},{"path":"https://www.pattern.institute/eunis.habitats/articles/crosswalks.html","id":"from-eunis-marine-2019-to-eunis-2012","dir":"Articles","previous_headings":"","what":"From EUNIS Marine 2019 to EUNIS 2012","title":"Crosswalk of Habitat Codes","text":"","code":"crosswalk(   code = c(\"MH152\", \"MH2331\"),   from = \"EUNIS_M_2019\",   to = \"EUNIS_2012\",   unnest = TRUE ) #> # A tibble: 2 × 2 #>   eunis_m_2019_code eunis_2012_code #>   <chr>             <chr>           #> 1 MH152             A7.12           #> 2 MH2331            A7.231"},{"path":"https://www.pattern.institute/eunis.habitats/articles/crosswalks.html","id":"from-eunis-marine-2022-to-the-european-red-list-of-habitats","dir":"Articles","previous_headings":"","what":"From EUNIS Marine 2022 to the European Red List of Habitats","title":"Crosswalk of Habitat Codes","text":"","code":"crosswalk(   code = c(\"MH152\", \"MH2331\", \"MA146\", \"MD55\"),   from = \"EUNIS_M_2022\",   to = \"RL\",   unnest = TRUE ) #> # A tibble: 4 × 2 #>   eunis_m_2022_code rl_code #>   <chr>             <chr>   #> 1 MH152             NA      #> 2 MH2331            NA      #> 3 MA146             A1.1xx  #> 4 MD55              A5.27"},{"path":"https://www.pattern.institute/eunis.habitats/articles/crosswalks.html","id":"one-to-many-mappings","dir":"Articles","previous_headings":"","what":"One to many mappings","title":"Crosswalk of Habitat Codes","text":"Note mappings one many, e.g. \"MA12\" EUNIS Marine 2019 maps following Habitats Directive Annex habitat codes: \"8330\", \"1160\", \"1170\" \"1130\". , default, column list-column. need use unnest = TRUE flatten table mappings convert list-column character vector column.","code":"crosswalk(   code = c(\"M\", \"MA1\", \"MA11\", \"MA12\"),   from = \"EUNIS_M_2019\",   to = \"Annex_I\" ) #> # A tibble: 4 × 2 #>   eunis_m_2019_code annex_i_code #>   <chr>             <list>       #> 1 M                 <chr [1]>    #> 2 MA1               <chr [1]>    #> 3 MA11              <chr [1]>    #> 4 MA12              <chr [4]> crosswalk(   code = c(\"M\", \"MA1\", \"MA11\", \"MA12\"),   from = \"EUNIS_M_2019\",   to = \"Annex_I\",   unnest = TRUE ) #> # A tibble: 7 × 2 #>   eunis_m_2019_code annex_i_code #>   <chr>             <chr>        #> 1 M                 NA           #> 2 MA1               NA           #> 3 MA11              NA           #> 4 MA12              8330         #> 5 MA12              1160         #> 6 MA12              1170         #> 7 MA12              1130"},{"path":"https://www.pattern.institute/eunis.habitats/articles/eunis-classification.html","id":"eunis-four-classifications","dir":"Articles","previous_headings":"","what":"EUNIS four classifications","title":"EUNIS Classification Systems","text":"eunis_habitats data set comprises four habitat classifications: EUNIS classification 2007, revised 2012. EUNIS marine classification 2019. EUNIS marine classification 2022. EUNIS terrestrial classification 2021. column classification distinguishes : example, access level 1 marine habitats classified according EUNIS revision 2022 (\"EUNIS_M_2022\"): list ice habitats (level 2):","code":"dplyr::distinct(eunis_habitats, classification) #> # A tibble: 4 × 1 #>   classification #>   <chr>          #> 1 EUNIS_2012     #> 2 EUNIS_M_2019   #> 3 EUNIS_M_2022   #> 4 EUNIS_T_2021 dplyr::filter(eunis_habitats, classification == \"EUNIS_M_2022\", level == 1L) #> # A tibble: 3 × 8 #>   classification section version group   level code  name            description #>   <chr>          <chr>   <chr>   <chr>   <int> <chr> <chr>           <chr>       #> 1 EUNIS_M_2022   marine  2022    benthic     1 M     Marine benthic… Marine ben… #> 2 EUNIS_M_2022   marine  2022    pelagic     1 MH    Pelagic water … The water … #> 3 EUNIS_M_2022   marine  2022    ice         1 MJ    Ice-associated… Sea ice, i… dplyr::filter(eunis_habitats,               classification == \"EUNIS_M_2022\",               group == \"ice\",               level == 2L) |>   dplyr::select(\"code\", \"name\") #> # A tibble: 4 × 2 #>   code  name              #>   <chr> <chr>             #> 1 MJ1   Sea ice           #> 2 MJ2   Freshwater ice    #> 3 MJ3   Brine channels    #> 4 MJ4   Under-ice habitat"},{"path":"https://www.pattern.institute/eunis.habitats/articles/logo.html","id":"original","dir":"Articles","previous_headings":"","what":"Original","title":"About the Logomark","text":"Source: https://flora-.pt/#/h2eJ7.  hex logo package derivative work based photograph Aster aragonensis flower botanist Miguel Porto, sourced Flora-, licensed Creative Commons Attribution-NonCommercial 4.0 International License (CC -NC 4.0).","code":""},{"path":"https://www.pattern.institute/eunis.habitats/articles/logo.html","id":"logomark","dir":"Articles","previous_headings":"","what":"Logomark","title":"About the Logomark","text":"Source: https://www.pattern.institute/eunis.habitats/logo.svg.  logomark cropped version original photograph, adapted fit hexagonal shape. means free share adapt logomark non-commercial purposes long give appropriate credit original creator, link license, indicate changes made. also implies use material commercial purposes, can apply legal terms technological measures legally restrict others anything license permits.","code":""},{"path":"https://www.pattern.institute/eunis.habitats/authors.html","id":null,"dir":"","previous_headings":"","what":"Authors","title":"Authors and Citation","text":"Ramiro Magno. Author, maintainer. Pedro Monteiro. Contributor. Luís Bentes. Contributor. Pattern Institute. Copyright holder, funder. . Funder.","code":""},{"path":"https://www.pattern.institute/eunis.habitats/authors.html","id":"citation","dir":"","previous_headings":"","what":"Citation","title":"Authors and Citation","text":"Magno R (2024). eunis.habitats: EUNIS Habitat Classification. R package version 0.1.0, https://www.pattern.institute/eunis.habitats/, https://github.com/patterninstitute/eunis.habitats.","code":"@Manual{,   title = {eunis.habitats: EUNIS Habitat Classification},   author = {Ramiro Magno},   year = {2024},   note = {R package version 0.1.0, https://www.pattern.institute/eunis.habitats/},   url = {https://github.com/patterninstitute/eunis.habitats}, }"},{"path":"https://www.pattern.institute/eunis.habitats/index.html","id":"eunishabitats-","dir":"","previous_headings":"","what":"EUNIS Habitat Classification","title":"EUNIS Habitat Classification","text":"eunis.habitats R data package provides EUNIS habitat classification tidy format.","code":""},{"path":"https://www.pattern.institute/eunis.habitats/index.html","id":"installation","dir":"","previous_headings":"","what":"Installation","title":"EUNIS Habitat Classification","text":"Install CRAN:","code":"install.packages(\"eunis.habitats\")"},{"path":"https://www.pattern.institute/eunis.habitats/index.html","id":"eunis-classifications","dir":"","previous_headings":"","what":"EUNIS classifications","title":"EUNIS Habitat Classification","text":"data set eunis_habitats provides four EUNIS classifications: EUNIS classification 2007, revised 2012. EUNIS marine classification 2019 EUNIS marine classification 2022 EUNIS terrestrial classification 2021 See vignette(\"eunis-classification\") learn .","code":""},{"path":"https://www.pattern.institute/eunis.habitats/index.html","id":"crosswalks","dir":"","previous_headings":"","what":"Crosswalks","title":"EUNIS Habitat Classification","text":"Use helper crosswalk() map habitat codes across classification systems: EUNIS habitat classifications European Red List Habitats Habitats Directive Annex See vignette(\"crosswalks\") details.","code":""},{"path":"https://www.pattern.institute/eunis.habitats/reference/crosswalk.html","id":null,"dir":"Reference","previous_headings":"","what":"Convert habitat codes — crosswalk","title":"Convert habitat codes — crosswalk","text":"Convert (crosswalk) habitat codes , , following habitat classification systems: EUNIS habitat classification: \"EUNIS_2012\", \"EUNIS_M_2019\", \"EUNIS_M_2022\" \"EUNIS_T_2021\". See eunis_habitats habitat codes, names descriptions. European Red List Habitats: \"RL\". Habitats Directive Annex : \"Annex_I\". Note pairwise combinations available. possibilities originally provided EUNIS raw data.","code":""},{"path":"https://www.pattern.institute/eunis.habitats/reference/crosswalk.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Convert habitat codes — crosswalk","text":"","code":"crosswalk(code, from, to, unnest = FALSE)"},{"path":"https://www.pattern.institute/eunis.habitats/reference/crosswalk.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Convert habitat codes — crosswalk","text":"code character vector habitat codes. values existing codes classification system indicated parameter. source classification system. one : \"EUNIS_2012\", \"EUNIS_M_2019\", \"EUNIS_M_2022\", \"EUNIS_T_2021\", \"RL\" \"Annex_I\". target classification system. Also, one options indicated parameter description. unnest Whether unnest \"\" column output. Note unnest number rows output (potentially) greater number habitat codes provided parameter code, meaning one--many crosswalks one row .","code":""},{"path":"https://www.pattern.institute/eunis.habitats/reference/crosswalk.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Convert habitat codes — crosswalk","text":"tibble two variables codes, respectively. actual column names vary according specific crosswalk queried, see Examples.","code":""},{"path":"https://www.pattern.institute/eunis.habitats/reference/crosswalk.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Convert habitat codes — crosswalk","text":"","code":"# From EUNIS 2012 to EUNIS Marine 2022 crosswalk(   code = c(\"A3.4\", \"A3.5\"),   from = \"EUNIS_2012\",   to = \"EUNIS_M_2022\",   unnest = TRUE ) #> # A tibble: 64 × 2 #>    eunis_2012_code eunis_m_2022_code #>    <chr>           <chr>             #>  1 A3.4            MA133             #>  2 A3.4            MA134             #>  3 A3.4            MA135             #>  4 A3.4            MA136             #>  5 A3.4            MA137             #>  6 A3.4            MB13              #>  7 A3.4            MB131             #>  8 A3.4            MB1311            #>  9 A3.4            MB1312            #> 10 A3.4            MB1313            #> # ℹ 54 more rows  # From EUNIS Marine 2019 to EUNIS 2012 crosswalk( code = c(\"MH152\", \"MH2331\"), from = \"EUNIS_M_2019\", to = \"EUNIS_2012\", unnest = TRUE ) #> # A tibble: 2 × 2 #>   eunis_m_2019_code eunis_2012_code #>   <chr>             <chr>           #> 1 MH152             A7.12           #> 2 MH2331            A7.231           # From EUNIS Marine 2022 to Red List crosswalk( code = c(\"MH152\", \"MH2331\", \"MA146\", \"MD55\"), from = \"EUNIS_M_2022\", to = \"RL\", unnest = TRUE ) #> # A tibble: 4 × 2 #>   eunis_m_2022_code rl_code #>   <chr>             <chr>   #> 1 MH152             NA      #> 2 MH2331            NA      #> 3 MA146             A1.1xx  #> 4 MD55              A5.27    # From EUNIS Marine 2019 to Annex I crosswalk( code = c(\"M\", \"MA1\", \"MA11\", \"MA12\"), from = \"EUNIS_M_2019\", to = \"Annex_I\", unnest = TRUE ) #> # A tibble: 7 × 2 #>   eunis_m_2019_code annex_i_code #>   <chr>             <chr>        #> 1 M                 NA           #> 2 MA1               NA           #> 3 MA11              NA           #> 4 MA12              8330         #> 5 MA12              1160         #> 6 MA12              1170         #> 7 MA12              1130          # From Annex I to EUNIS Marine 2019 crosswalk( code = c(\"8330\", \"1160\"), from = \"Annex_I\", to = \"EUNIS_M_2019\", unnest = TRUE ) #> # A tibble: 966 × 2 #>    annex_i_code eunis_m_2019_code #>    <chr>        <chr>             #>  1 8330         MA12              #>  2 8330         MA127             #>  3 8330         MA1271            #>  4 8330         MA1272            #>  5 8330         MA1273            #>  6 8330         MA1274            #>  7 8330         MA1275            #>  8 8330         MA1276            #>  9 8330         MA12761           #> 10 8330         MA1277            #> # ℹ 956 more rows  # From EUNIS Terrestrial 2021 to Annex I crosswalk( code = c(\"U51\", \"U72\", \"Q25\"), from = \"EUNIS_T_2021\", to = \"Annex_I\", unnest = TRUE ) #> # A tibble: 6 × 2 #>   eunis_t_2021_code annex_i_code #>   <chr>             <chr>        #> 1 U72               3250         #> 2 U72               3280         #> 3 U72               3290         #> 4 Q25               7140         #> 5 Q25               7130         #> 6 U51               NA            # From Annex I to EUNIS Terrestrial 2021 crosswalk(   code = c(\"91E0\", \"92A0\", \"9030\"),   from = \"Annex_I\",   to = \"EUNIS_T_2021\", unnest = TRUE   ) #> # A tibble: 6 × 2 #>   annex_i_code eunis_t_2021_code #>   <chr>        <chr>             #> 1 92A0         T11               #> 2 92A0         T14               #> 3 9030         T12               #> 4 9030         T1C               #> 5 91E0         T11               #> 6 91E0         T12"},{"path":"https://www.pattern.institute/eunis.habitats/reference/eunis.habitats-package.html","id":null,"dir":"Reference","previous_headings":"","what":"eunis.habitats: EUNIS Habitat Classification — eunis.habitats-package","title":"eunis.habitats: EUNIS Habitat Classification — eunis.habitats-package","text":"EUNIS habitat classification comprehensive pan-European system habitat identification https://www.eea.europa.eu/data--maps/data/eunis-habitat-classification-1. R data package providing EUNIS classification system. classification hierarchical covers types habitats natural artificial, terrestrial freshwater marine. habitat types identified specific codes, names descriptions come schema crosswalks habitat typologies.","code":""},{"path":[]},{"path":"https://www.pattern.institute/eunis.habitats/reference/eunis.habitats-package.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"eunis.habitats: EUNIS Habitat Classification — eunis.habitats-package","text":"Maintainer: Ramiro Magno rmagno@pattern.institute (ORCID) contributors: Pedro Monteiro pmontei@ualg.pt (ORCID) [contributor] Luís Bentes lbentes@ualg.pt (ORCID) [contributor] Pattern Institute [copyright holder, funder] CCMAR [funder]","code":""},{"path":"https://www.pattern.institute/eunis.habitats/reference/eunis_habitats.html","id":null,"dir":"Reference","previous_headings":"","what":"EUNIS Habitats — eunis_habitats","title":"EUNIS Habitats — eunis_habitats","text":"data set EUNIS habitats. row habitat. EUNIS habitat classification comprehensive pan-European system habitat identification. classification hierarchical covers types habitats natural artificial, terrestrial freshwater marine. habitat types identified specific codes, names descriptions come cross-walks habitat typologies. See crosswalk() mapping habitat classification systems.","code":""},{"path":"https://www.pattern.institute/eunis.habitats/reference/eunis_habitats.html","id":"format","dir":"Reference","previous_headings":"","what":"Format","title":"EUNIS Habitats — eunis_habitats","text":"tibble eight variables: classification Classification identifier. Identifies one four habitat classifications. section Component EUNIS classification: \"marine\" \"terrestrial\". version Classification version. group Habitat group. level Habitat level. code Habitat code. name Habitat name. description Habitat description.","code":""},{"path":"https://www.pattern.institute/eunis.habitats/reference/eunis_habitats.html","id":"source","dir":"Reference","previous_headings":"","what":"Source","title":"EUNIS Habitats — eunis_habitats","text":"https://www.eea.europa.eu/data--maps/data/eunis-habitat-classification-1","code":""},{"path":[]},{"path":"https://www.pattern.institute/eunis.habitats/reference/eunis_habitats.html","id":"eunis-","dir":"Reference","previous_headings":"","what":"EUNIS 2012","title":"EUNIS Habitats — eunis_habitats","text":"full list EUNIS habitats 2012: codes, scientific names revised descriptions. habitat descriptions EUNIS classification 2007 revised 2012. 2007 habitat types changed 2012 description revision mostly replaced Palaearctic UK Marine habitat classification codes used habitat descriptions levels 5 EUNIS classification equivalents. 2019 classification amended include two new habitats revised Resolution 4 Bern Convention adopted 38th Standing Committee meeting, November 2018. two habitats G3.4G Pinus sylvestris forest chalk steppe zone X36 Depressions (pody) Steppe zone.","code":""},{"path":"https://www.pattern.institute/eunis.habitats/reference/eunis_habitats.html","id":"eunis-marine-","dir":"Reference","previous_headings":"","what":"EUNIS Marine 2019","title":"EUNIS Habitats — eunis_habitats","text":"revision EUNIS marine habitat classification published 2019. June 2021 classification complemented crosswalks Habitats Directive Annex European Red List Habitats. updated version published March 2022. Users change 2022 version earliest convenience.","code":""},{"path":"https://www.pattern.institute/eunis.habitats/reference/eunis_habitats.html","id":"eunis-marine--1","dir":"Reference","previous_headings":"","what":"EUNIS Marine 2022","title":"EUNIS Habitats — eunis_habitats","text":"review marine component EUNIS habitat classification initiated 2014. Marine benthic habitats, marine pelagic marine ice associated habitats separated three distinct groups, separate classification structure. first major division benthic marine part EUNIS classification based major biological zones (related depth) substrate type. Level 3 classification reflects main biogeographical regions Europe’s seas based distinct combinations salinity temperature regimes (Arctic, Baltic, Atlantic, Mediterranean Black Sea). first review published 2019 update version concerning mostly Atlantic regional sea available since March 2022. Crosswalks Habitats Directive Annex European Red List Habitats available crosswalks EUNIS marine habitats version 2012 regional seas apart Atlantic need revisited.","code":""},{"path":"https://www.pattern.institute/eunis.habitats/reference/eunis_habitats.html","id":"eunis-terrestrial-","dir":"Reference","previous_headings":"","what":"EUNIS Terrestrial 2021","title":"EUNIS Habitats — eunis_habitats","text":"review terrestrial component EUNIS habitat classification initiated 2015. review concerns groups coastal habitats, grasslands, heathland, forest, sparsely vegetated vegetated man-made habitats. review updated January 2023 corrections existing groups inclusion wetlands additional crosslinks. remaining groups revised published later stage. classification includes cross-walks level 3 Habitats Directive Annex , European Red List Habitats, Bern Convention Resolution 4 habitats, MAES IUCN ecosystems, Corine Land Cover classes Euroveg Checklist 2016 Syntaxa. groups forest heathland include also crosswalks earlier revision groups published 2017. Habitats level 3 complemented lists characteristic species identified EVA database.","code":""},{"path":"https://www.pattern.institute/eunis.habitats/reference/eunis_habitats.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"EUNIS Habitats — eunis_habitats","text":"","code":"# EUNIS 2012 subset(eunis_habitats, classification == \"EUNIS_2012\") #> # A tibble: 5,285 × 8 #>    classification section version group level code    name           description #>    <chr>          <chr>   <chr>   <chr> <int> <chr>   <chr>          <chr>       #>  1 EUNIS_2012     NA      2012    NA        1 A       Marine habita… \"Marine ha… #>  2 EUNIS_2012     NA      2012    NA        2 A1      Littoral rock… \"Littoral … #>  3 EUNIS_2012     NA      2012    NA        3 A1.1    High energy l… \"Extremely… #>  4 EUNIS_2012     NA      2012    NA        4 A1.11   Mussel and/or… \"Communiti… #>  5 EUNIS_2012     NA      2012    NA        5 A1.111  [Mytilus edul… \"On very e… #>  6 EUNIS_2012     NA      2012    NA        5 A1.112  [Chthamalus] … \"Very expo… #>  7 EUNIS_2012     NA      2012    NA        6 A1.1121 [Chthamalus m… \"Very expo… #>  8 EUNIS_2012     NA      2012    NA        6 A1.1122 [Chthamalus] … \"Areas of … #>  9 EUNIS_2012     NA      2012    NA        5 A1.113  [Semibalanus … \"Exposed t… #> 10 EUNIS_2012     NA      2012    NA        6 A1.1131 [Semibalanus … \"Very expo… #> # ℹ 5,275 more rows  # EUNIS Marine 2019 subset(eunis_habitats, classification == \"EUNIS_M_2019\") #> # A tibble: 1,939 × 8 #>    classification section version group   level code    name         description #>    <chr>          <chr>   <chr>   <chr>   <int> <chr>   <chr>        <chr>       #>  1 EUNIS_M_2019   marine  2019    benthic     1 M       Marine bent… \"Marine be… #>  2 EUNIS_M_2019   marine  2019    benthic     2 MA1     Littoral ro… \"Littoral … #>  3 EUNIS_M_2019   marine  2019    benthic     3 MA11    Arctic litt… \"Arctic li… #>  4 EUNIS_M_2019   marine  2019    benthic     3 MA12    Atlantic li… \"Atlantic … #>  5 EUNIS_M_2019   marine  2019    benthic     4 MA121   Lichens or … \"Lichen co… #>  6 EUNIS_M_2019   marine  2019    benthic     5 MA1211  Yellow and … \"Vertical … #>  7 EUNIS_M_2019   marine  2019    benthic     5 MA1212  Prasiola st… \"Exposed t… #>  8 EUNIS_M_2019   marine  2019    benthic     5 MA1213  Verrucaria … \"Bedrock o… #>  9 EUNIS_M_2019   marine  2019    benthic     6 MA12131 Verrucaria … \"The litto… #> 10 EUNIS_M_2019   marine  2019    benthic     6 MA12132 Verrucaria … \"Upper lit… #> # ℹ 1,929 more rows  # EUNIS Marine 2022 subset(eunis_habitats, classification == \"EUNIS_M_2022\") #> # A tibble: 1,942 × 8 #>    classification section version group   level code    name         description #>    <chr>          <chr>   <chr>   <chr>   <int> <chr>   <chr>        <chr>       #>  1 EUNIS_M_2022   marine  2022    benthic     1 M       Marine bent… \"Marine be… #>  2 EUNIS_M_2022   marine  2022    benthic     2 MA1     Littoral ro… \"Littoral … #>  3 EUNIS_M_2022   marine  2022    benthic     3 MA11    Arctic litt… \"Arctic li… #>  4 EUNIS_M_2022   marine  2022    benthic     3 MA12    Atlantic li… \"Atlantic … #>  5 EUNIS_M_2022   marine  2022    benthic     4 MA121   Lichens or … \"Lichen co… #>  6 EUNIS_M_2022   marine  2022    benthic     5 MA1211  Yellow and … \"Vertical … #>  7 EUNIS_M_2022   marine  2022    benthic     5 MA1212  Prasiola st… \"Exposed t… #>  8 EUNIS_M_2022   marine  2022    benthic     5 MA1213  Verrucaria … \"Bedrock o… #>  9 EUNIS_M_2022   marine  2022    benthic     6 MA12131 Verrucaria … \"The litto… #> 10 EUNIS_M_2022   marine  2022    benthic     6 MA12132 Verrucaria … \"Upper lit… #> # ℹ 1,932 more rows  # EUNIS Terrestrial 2021 subset(eunis_habitats, classification == \"EUNIS_T_2021\") #> # A tibble: 3,949 × 8 #>    classification section     version group   level code  name       description #>    <chr>          <chr>       <chr>   <chr>   <int> <chr> <chr>      <chr>       #>  1 EUNIS_T_2021   terrestrial 2021_1  coastal     1 N     Coastal h… Coastal ha… #>  2 EUNIS_T_2021   terrestrial 2021_1  coastal     2 N1    Coastal d… Sand-cover… #>  3 EUNIS_T_2021   terrestrial 2021_1  coastal     3 N11   Atlantic,… Atlantic, … #>  4 EUNIS_T_2021   terrestrial 2021_1  coastal     4 N111  Boreo-Arc… Annual com… #>  5 EUNIS_T_2021   terrestrial 2021_1  coastal     4 N112  Middle Eu… Annual hal… #>  6 EUNIS_T_2021   terrestrial 2021_1  coastal     5 N1121 Baltic sa… Annual dri… #>  7 EUNIS_T_2021   terrestrial 2021_1  coastal     4 N113  Unvegetat… Sandy beac… #>  8 EUNIS_T_2021   terrestrial 2021_1  coastal     5 N1131 Baltic un… No descrip… #>  9 EUNIS_T_2021   terrestrial 2021_1  coastal     5 N1132 Baltic un… No descrip… #> 10 EUNIS_T_2021   terrestrial 2021_1  coastal     4 N114  Biocenosi… Area corre… #> # ℹ 3,939 more rows"},{"path":"https://www.pattern.institute/eunis.habitats/news/index.html","id":"eunishabitats-010","dir":"Changelog","previous_headings":"","what":"eunis.habitats 0.1.0","title":"eunis.habitats 0.1.0","text":"CRAN release: 2023-07-11 Added NEWS.md file track changes package.","code":""}]
diff --git a/sitemap.xml b/sitemap.xml
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+++ b/sitemap.xml
@@ -5,6 +5,7 @@
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 <url><loc>https://www.pattern.institute/eunis.habitats/articles/index.html</loc></url>
+<url><loc>https://www.pattern.institute/eunis.habitats/articles/logo.html</loc></url>
 <url><loc>https://www.pattern.institute/eunis.habitats/authors.html</loc></url>
 <url><loc>https://www.pattern.institute/eunis.habitats/index.html</loc></url>
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