diff --git a/src/subcommand/stats_main.cpp b/src/subcommand/stats_main.cpp index 6ee48b7c..15d06110 100644 --- a/src/subcommand/stats_main.cpp +++ b/src/subcommand/stats_main.cpp @@ -167,7 +167,7 @@ int main_stats(int argc, char** argv) { const uint64_t shift = number_bool_packing::unpack_number(graph.get_handle(graph.min_node_id())); - if (args::get(mean_links_length) || args::get(sum_of_path_node_distances) || _multiqc) { + if (args::get(mean_links_length) || args::get(sum_of_path_node_distances)) { if (number_bool_packing::unpack_number(graph.get_handle(graph.max_node_id())) - shift >= graph.get_node_count()){ std::cerr << "[odgi::stats] error: the node IDs are not compacted. Please run 'odgi sort' using -O, --optimize to optimize the graph." << std::endl; exit(1); @@ -371,7 +371,7 @@ int main_stats(int argc, char** argv) { // TODO clear all sets? } - if (args::get(mean_links_length) || args::get(sum_of_path_node_distances) || _multiqc) { + if (args::get(mean_links_length) || args::get(sum_of_path_node_distances)) { // This vector is needed for computing the metrics in 1D and for detecting gap-links std::vector position_map(graph.get_node_count() + 1); @@ -409,7 +409,7 @@ int main_stats(int argc, char** argv) { position_map[position_map.size() - 1] = len; } - if (args::get(mean_links_length) || _multiqc){ + if (args::get(mean_links_length)){ bool _dont_penalize_gap_links = args::get(dont_penalize_gap_links); uint64_t sum_all_node_space = 0; @@ -582,7 +582,7 @@ int main_stats(int argc, char** argv) { } } - if (args::get(sum_of_path_node_distances) || _multiqc){ + if (args::get(sum_of_path_node_distances)){ bool _penalize_diff_orientation = args::get(penalize_diff_orientation); uint64_t sum_all_path_node_dist_node_space = 0;