From ab50df7c359e724904acffbe78510cc638f2524b Mon Sep 17 00:00:00 2001 From: Gregory Owens <5419829+owensgl@users.noreply.github.com> Date: Mon, 4 Mar 2024 19:32:37 -0800 Subject: [PATCH] Update lab_8.md --- labs/lab_8.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/labs/lab_8.md b/labs/lab_8.md index aa06dee57..b12fd471e 100644 --- a/labs/lab_8.md +++ b/labs/lab_8.md @@ -303,7 +303,7 @@ bcftools query -l chinook.g5.m2.c5.d5.20miss.subsample.vcf.gz | grep Chilcotin > ``` Now we next calculate Weir and Cockerhams FST from our vcf ``` -vcftools --gzvcf chinook.g5.m2.c5.d5.20miss.subsample.vcf.gz${VCF} \ +vcftools --gzvcf chinook.g5.m2.c5.d5.20miss.subsample.vcf.gz \ --weir-fst-pop chilko.txt \ --weir-fst-pop chilcotin.txt \ --out chinook.g5.m2.c5.d5.20miss.subsample