Repositories list

• purrlab.github.io

  Public
  HTML

  •

  MIT License

  •0•0•0•0•Updated Nov 13, 2024Nov 13, 2024

• msc-microbleeds

  Public
  Repository containing results of my MSc thesis at ITU in collaboration with CEREBRIU company

  Jupyter Notebook

  •1•0•0•0•Updated Oct 23, 2024Oct 23, 2024

• Templates

  Public
  Templates of LaTex, PowerPoint, etc.

  0•0•0•0•Updated Aug 7, 2024Aug 7, 2024

• catchy

  Public
  CATchy if you can: how non-scientific factors contribute to citations of research

  Python

  •1•0•0•0•Updated Jun 24, 2024Jun 24, 2024

• msc-synthetic-chest

  Public
  Jupyter Notebook

  •2•0•0•0•Updated Jun 3, 2024Jun 3, 2024

• Bsc-Sign-Language-Recon

  Public
  sign-language-recognitionbsc-thesis

  Python

  •1•0•0•0•Updated May 15, 2024May 15, 2024

• Shortcuts-Problem-in-Medical-Image-Analysis

  Public
  BSc Project

  shortcutschest-xraysbsc-thesis

  Jupyter Notebook

  •2•0•0•0•Updated May 15, 2024May 15, 2024

• bsc-miccai-demographics

  Public
  This GitHub repository hosts the notebooks and tools developed as part of this thesis to automate the extraction, processing, and analysis of data from the MICCAI 2023 conference, aiding in the systematic review and providing a structured foundation for further research in this crucial area.

  Jupyter Notebook

  •1•0•0•0•Updated May 15, 2024May 15, 2024

• source-matters

  Public
  AMAI - MICCAI 2024 (oral) - Source Matters: Source Dataset Impact on Model Robustness in Medical Imaging

  Jupyter Notebook

  •

  MIT License

  •1•0•0•0•Updated Apr 8, 2024Apr 8, 2024

• itu_poster_template

  Public
  IT university of copenhagen template for poster in LaTeX

  templatelatexposter+ 1itu

  TeX

  •0•0•0•0•Updated Feb 10, 2024Feb 10, 2024

• Public_Medical_Datasets_References

  Public
  MIDL 2024 (oral) Pipeline to detect dataset presence in research papers

  Jupyter Notebook

  •1•0•0•0•Updated Feb 6, 2024Feb 6, 2024

• data-reuse-neuroimaging

  Public
  This repository contains the code for my thesis on open neuroimaging datasets and dataset re-use.

  msc-thesismeta-science

  Jupyter Notebook

  •1•0•0•0•Updated Dec 31, 2023Dec 31, 2023

• segmentation-microbleeds

  Public
  Repository containing results of my Research Project at ITU in collaboration with CEREBRIU company

  mrisegmentationresearch-project+ 1brain

  Jupyter Notebook

  •1•0•0•0•Updated Dec 14, 2023Dec 14, 2023

• chestxr-masking

  Public
  segmentationresearch-projectshortcuts+ 1chest-xrays

  Jupyter Notebook

  •4•0•0•0•Updated Dec 4, 2023Dec 4, 2023

• revisiting-transfer

  Public
  Transactions on Machine Learning Research (TMLR) - Revisiting Hidden Representations in Transfer Learning for Medical Imaging

  Python

  •

  MIT License

  •2•0•0•0•Updated Oct 19, 2023Oct 19, 2023

• chest-xrays-review

  Public
  msc-thesischest-xraysmeta-science+ 1systematic-review

  Jupyter Notebook

  •1•0•0•0•Updated Jun 1, 2023Jun 1, 2023

• chestxr-label-reliability

  Public
  annotationsmsc-thesischest-xrays+ 2chestxray14padchest-dataset

  Jupyter Notebook

  •4•0•0•0•Updated May 30, 2023May 30, 2023

• carbon-cost-kaggle

  Public
  Investigating the carbon cost of kaggle competitions

  kagglecarbon-footprintbsc-thesis+ 1meta-science

  Jupyter Notebook

  •

  MIT License

  •1•0•0•0•Updated May 15, 2023May 15, 2023

• selfsupervised-radimagenet

  Public
  research-projecttransfer-learningradimagenet

  Jupyter Notebook

  •1•0•0•0•Updated Mar 16, 2023Mar 16, 2023

• PublicDatasets-MIDL

  Public
  Research Project Repo on How Datasets are Cited @ PURRlab, ITU Copenhagen

  conferencescitationsresearch-project+ 2midlmeta-science

  Jupyter Notebook

  •1•0•0•0•Updated Dec 20, 2022Dec 20, 2022

• MICCAI-paper-analysis

  Public
  master-thesisconferencesmiccai+ 1meta-science

  Jupyter Notebook

  •2•0•0•0•Updated Dec 1, 2022Dec 1, 2022

• shortcuts-chest-xray

  Public
  Detecting Shortcuts in Medical Images - A Case Study in Chest X-rays - ISBI 2023

  shortcutschest-xraysisbi

  Python

  •1•0•0•0•Updated Nov 9, 2022Nov 9, 2022

• example-hpc-itu-mnist

  Public
  Digit recognition (MNIST) with PyTorch using the HPC cluster @ ITU.

  hpcstudent-project

  Python

  •1•0•0•0•Updated Aug 12, 2022Aug 12, 2022

• FuriganaDetection

  Public
  master-thesistextdetection+ 1furigana

  Python

  •1•0•0•0•Updated May 31, 2022May 31, 2022

• .github

  Public
  0•0•0•0•Updated May 25, 2022May 25, 2022

• cats-scans

  Public
  Cats or CAT Scans

  transfer-learningpretraining

  Python

  •2•0•0•0•Updated May 24, 2022May 24, 2022

• hiddenfeatures-mammogram

  Public
  shortcutsbsc-thesismammography

  Jupyter Notebook

  •1•0•0•0•Updated May 16, 2022May 16, 2022

• hiddenfeatures-chestxray

  Public
  Finding Hidden Features Responsible for Machine Learning Failures

  bsc-thesis

  Python

  •3•0•0•0•Updated May 15, 2022May 15, 2022

• hiddenfeatures-chestxray-model

  Public
  Forked from https://github.com/jfhealthcare/Chexpert

  shortcutschest-xraysbsc-thesis

  Python

  •1•0•0•0•Updated May 15, 2022May 15, 2022

• ml_med_imaging_failures

  Public
  Failures in machine learning for medical imaging

  HTML

  •6•0•0•0•Updated Feb 15, 2022Feb 15, 2022