Repositories list

• MosaiC-All

  Public
  Pipeline to analyse Mosaicism

  Shell

  •1•3•0•0•Updated Aug 15, 2024Aug 15, 2024

• Structural-Variants

  Public
  Shell

  •1•0•0•0•Updated Apr 23, 2024Apr 23, 2024

• VariantAnnotationToolkit

  Public
  VATK! A collection of helper scripts to annotate and sort variants

  Shell

  •1•1•0•0•Updated Dec 6, 2023Dec 6, 2023

• longReads

  Public
  Scripts for working with long read sequencing data

  Shell

  •1•0•0•0•Updated Dec 5, 2023Dec 5, 2023

• sv-callers

  Public
  A user-friendly, portable and scalable workflow for detecting structural variants in whole genome sequence data

  Python

  •

  Apache License 2.0

  •35•0•0•0•Updated Jul 13, 2021Jul 13, 2021

• dbGaP_download

  Public
  Shell

  •0•0•0•0•Updated Nov 23, 2020Nov 23, 2020

• Meh

  Public
  Mark's utility scripts

  Shell

  •0•0•0•0•Updated Jan 17, 2020Jan 17, 2020

• RNA-seq

  Public
  R

  •0•0•0•0•Updated Aug 27, 2019Aug 27, 2019

• Somatic-mosaicism

  Public
  Shell

  •1•0•0•0•Updated Aug 21, 2019Aug 21, 2019

• miscellaneous

  Public
  💡

  Shell

  •1•0•0•0•Updated Aug 19, 2019Aug 19, 2019