Repositories list

• star-study

  Public
  Python

  •0•0•0•0•Updated Nov 15, 2024Nov 15, 2024

• Star-CDP

  Public
  Cell lineage tree estimation via Star Homoplasy parsimony; also applicable to Camin-Sokal parsimony with binary characters

  phylogenyparsimonycrispr-cas9+ 3cell-lineage-treestar-homoplasycamin-sokal

  C++

  •

  MIT License

  •0•0•0•0•Updated Oct 31, 2024Oct 31, 2024

• ck-phylo-workshop

  Public
  Coalescent Lab at 2024 Workshop on Phylogenomics @ Cesky Krumlov

  Python

  •0•1•0•0•Updated Oct 30, 2024Oct 30, 2024

• tree-qmc-study

  Public
  Shell

  •0•0•0•0•Updated Oct 17, 2024Oct 17, 2024

• TREE-QMC

  Public
  Species tree estimation from gene trees via weighted quartets

  phylogeneticsspecies-treesgene-trees+ 2quartetsweighted-quartets

  C++

  •

  MIT License

  •1•0•0•0•Updated Oct 1, 2024Oct 1, 2024

• wabi-star-study

  Public
  Python

  •0•0•0•0•Updated Jun 17, 2024Jun 17, 2024

• Dollo-CDP

  Public
  Phylogeny estimation from binary characters via Dollo parsimony

  charactersphylogenyparsimony+ 1dollo

  C++

  •

  MIT License

  •0•3•0•0•Updated Jun 13, 2024Jun 13, 2024

• TREE-QMC-v2

  Public archive
  Species tree estimation from gene trees via quartets

  phylogeneticsspecies-treesgene-trees+ 1quartets

  C++

  •

  MIT License

  •0•1•0•0•Updated Mar 21, 2024Mar 21, 2024

• TREE-QMC-v1

  Public archive
  Species tree estimation from gene trees via quartets

  C++

  •

  MIT License

  •0•3•0•0•Updated Jan 15, 2024Jan 15, 2024

• dollo-study

  Public
  Shell

  •0•0•0•0•Updated Oct 14, 2023Oct 14, 2023

• .github

  Public
  0•0•0•0•Updated Aug 20, 2023Aug 20, 2023