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Pull requests: opencb/cellbase

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Pull requests list

TASK-6565 Ensure the CellBase DB adaptors are updated to reflect the latest data releases
#700 opened Jul 19, 2024 by jtarraga Loading…
11
Include API-KEY for CADD scores
#699 opened Jul 18, 2024 by jtarraga Loading…
TASK-5388 - Add AlphaMissense predictions
#698 opened Jul 1, 2024 by jtarraga Loading…
TASK-5387 - Add Polygenic Scores (PGS)
#697 opened Jul 1, 2024 by jtarraga Loading…
TASK-5564 - Update data sources for CellBase 6.2
#696 opened Jul 1, 2024 by jtarraga Loading…
fix truncation of results in phased queries where checkAminoAcidChange=TRUE
#690 opened May 10, 2024 by julie-sullivan Loading…
Fix insertion with n consequence type
#672 opened Sep 25, 2023 by awab-ahmed Loading…
build(deps): bump jetty-server from 9.4.17.v20190418 to 9.4.51.v20230217 dependencies Pull requests that update a dependency file
#657 opened Jun 13, 2023 by dependabot bot Loading…
TASK-2528 Fix CellBase 5.2.x variant-annotation command: java.lang.NoClassDefFoundError: org/mortbay/util/ajax/JSON
#635 opened Dec 22, 2022 by jtarraga Loading…
1
TASK-2428 - Pycellbase cbtools not working for cellbase v5 bug client
#631 opened Nov 29, 2022 by dapregi • Draft
1
add an optional filter to VCF variant annotation
#630 opened Nov 21, 2022 by julie-sullivan Loading…
fix consequence types for CNVs with 2 copies
#629 opened Nov 21, 2022 by julie-sullivan Loading…
fix cnvpadding param. TEST FAILING
#628 opened Nov 16, 2022 by julie-sullivan Loading…
@julie-sullivan
MNVs - other variants considered as part of phased MNV annotation
#624 opened Nov 3, 2022 by julie-sullivan Loading…
@julie-sullivan
Remove ensembl compara and funcgen
#623 opened Nov 2, 2022 by julie-sullivan Loading…
@julie-sullivan
ClinVar - add associated scvIds, vcvIds, rcvIds to additional properties
#621 opened Oct 12, 2022 by julie-sullivan Loading…
chore: Add unit tests for HgvsCalculator
#609 opened Sep 6, 2022 by squinker Loading…
Add query retry to PyCellBase v5 enhancement
#562 opened Jul 6, 2021 by julie-sullivan Loading… v5.0.0
@julie-sullivan @dapregi
2
Intelligent avoid of files re-download
#405 opened Jun 24, 2019 by Lucioric2000 Loading… v5.0.0
@imedina @julie-sullivan
2
Feature improve tests
#368 opened Nov 28, 2017 by wbari Loading…
Feature cache
#357 opened Sep 7, 2017 by wbari Loading…
latest version of cellbaseR
#334 opened Apr 26, 2017 by melsiddieg Loading…
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