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Add CLI parameters: --add-network-file, --add-variant-file... #58

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jtarraga opened this issue Nov 26, 2020 · 0 comments
Open
2 tasks done

Add CLI parameters: --add-network-file, --add-variant-file... #58

jtarraga opened this issue Nov 26, 2020 · 0 comments

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@jtarraga
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jtarraga commented Nov 26, 2020

The admin commad line for buiding CSV files should support the following parameters:

  • --add-network-file , a JSON file containing a network according to the BioNetDB network data model.
  • --add-variant-file , to a file containing variants in JSON format, one variant per line.

For instance:
$ bionetdb-admin.sh build -i ~/download -o ~/build --add-network-file ~/test/clinical_analysis.network.json

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