From 70f86b4ec89fe20ff9fe30fd60340c57fe50b6b4 Mon Sep 17 00:00:00 2001
From: Ilya Flyamer <flyamer@gmail.com>
Date: Wed, 17 Mar 2021 18:36:58 +0000
Subject: [PATCH] Update Snakefile

---
 workflow/Snakefile | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/workflow/Snakefile b/workflow/Snakefile
index cb9ee35..9cebe54 100644
--- a/workflow/Snakefile
+++ b/workflow/Snakefile
@@ -904,7 +904,7 @@ rule make_saddles:
         mem_mb=8 * 1024,
         runtime=60,
     shell:
-        "cooltools compute-saddle -o {params.prefix} {params.args} {params.distargs} {input.cooler}::resolutions/{wildcards.resolution} {input.eigenvector} {input.expected}"
+        "cooltools compute-saddle -o {params.prefix} {params.args} {params.distargs} --n-bins {wildcards.bins} {input.cooler}::resolutions/{wildcards.resolution} {input.eigenvector} {input.expected}"
 
 
 rule make_expected: