From c6f49a7f3e683ed9b0fdfe23821886277958e031 Mon Sep 17 00:00:00 2001 From: bparks13 Date: Fri, 8 Mar 2024 21:01:08 -0500 Subject: [PATCH 1/3] Update Pipfile.lock --- Pipfile.lock | 167 ++++++++++++++++++++++++--------------------------- 1 file changed, 78 insertions(+), 89 deletions(-) diff --git a/Pipfile.lock b/Pipfile.lock index 17eb5289..f744fe17 100644 --- a/Pipfile.lock +++ b/Pipfile.lock @@ -1,7 +1,7 @@ { "_meta": { "hash": { - "sha256": "31297006269e25e464d259aa24cc8e14b64a759b4bfb027cf917dbcade68fa42" + "sha256": "f9a71382569b84588c66f5030041b9029792f0314fb8b27f0de2500719a15172" }, "pipfile-spec": 6, "requires": {}, @@ -53,14 +53,6 @@ "markers": "python_full_version >= '3.6.0'", "version": "==4.12.3" }, - "breathe": { - "hashes": [ - "sha256:5165541c3c67b6c7adde8b3ecfe895c6f7844783c4076b6d8d287e4f33d62386", - "sha256:52c581f42ca4310737f9e435e3851c3d1f15446205a85fbc272f1f97ed74f5be" - ], - "index": "pypi", - "version": "==4.35.0" - }, "cairocffi": { "hashes": [ "sha256:78e6bbe47357640c453d0be929fa49cd05cce2e1286f3d2a1ca9cbda7efdb8b7", @@ -79,11 +71,11 @@ }, "certifi": { "hashes": [ - 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"sphinx-csharp": { - "git": "https://github.com/rogerbarton/sphinx-csharp.git", - "ref": "1e4cf5d2cca28424ec836ed1989fd0f24b3e7172" - }, "sphinxcontrib-applehelp": { "hashes": [ "sha256:c40a4f96f3776c4393d933412053962fac2b84f4c99a7982ba42e09576a70619", @@ -679,19 +668,19 @@ }, "typing-extensions": { "hashes": [ - "sha256:23478f88c37f27d76ac8aee6c905017a143b0b1b886c3c9f66bc2fd94f9f5783", - "sha256:af72aea155e91adfc61c3ae9e0e342dbc0cba726d6cba4b6c72c1f34e47291cd" + "sha256:69b1a937c3a517342112fb4c6df7e72fc39a38e7891a5730ed4985b5214b5475", + "sha256:b0abd7c89e8fb96f98db18d86106ff1d90ab692004eb746cf6eda2682f91b3cb" ], "markers": "python_version >= '3.8'", - "version": "==4.9.0" + "version": "==4.10.0" }, "urllib3": { "hashes": [ - "sha256:55901e917a5896a349ff771be919f8bd99aff50b79fe58fec595eb37bbc56bb3", - "sha256:df7aa8afb0148fa78488e7899b2c59b5f4ffcfa82e6c54ccb9dd37c1d7b52d54" + "sha256:450b20ec296a467077128bff42b73080516e71b56ff59a60a02bef2232c4fa9d", + "sha256:d0570876c61ab9e520d776c38acbbb5b05a776d3f9ff98a5c8fd5162a444cf19" ], "markers": "python_version >= '3.8'", - "version": "==2.1.0" + "version": "==2.2.1" }, "wavedrom": { "hashes": [ From 4fd0e93c6628ffd5a320245a31364e8e4659da78 Mon Sep 17 00:00:00 2001 From: bparks13 Date: Fri, 8 Mar 2024 16:05:40 -0500 Subject: [PATCH 2/3] Remove breathe and sphinx_csharp references --- source/conf.py | 4 ---- 1 file changed, 4 deletions(-) diff --git a/source/conf.py b/source/conf.py index a2fbaeb6..21a7a1b6 100644 --- a/source/conf.py +++ b/source/conf.py @@ -43,8 +43,6 @@ 'sphinx.ext.githubpages', 'sphinx.ext.graphviz', 'sphinxcontrib.wavedrom', - 'breathe', - 'sphinx_csharp', ] # Add any paths that contain templates here, relative to this directory. @@ -71,8 +69,6 @@ # todo configuration todo_include_todos = True -# Breathe Configuration - # -- Options for HTML output ------------------------------------------------- # The theme to use for HTML and HTML Help pages. See the documentation for From b2c49dd3e0d4a3b84538469ec32d2575b1d31372 Mon Sep 17 00:00:00 2001 From: bparks13 Date: Fri, 8 Mar 2024 17:01:14 -0500 Subject: [PATCH 3/3] Use workflow-zip template --- .../Bonsai.ONIX/Bonsai Examples/HeadstageNP1e.rst | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/source/Software Guide/Bonsai.ONIX/Bonsai Examples/HeadstageNP1e.rst b/source/Software Guide/Bonsai.ONIX/Bonsai Examples/HeadstageNP1e.rst index 4a651a25..fa7f99bc 100644 --- a/source/Software Guide/Bonsai.ONIX/Bonsai Examples/HeadstageNP1e.rst +++ b/source/Software Guide/Bonsai.ONIX/Bonsai Examples/HeadstageNP1e.rst @@ -12,7 +12,7 @@ level contains acquisition code for a different sensor on the headstage. A probe .. raw:: html {% with static_path = '../../../_static', name = 'HeadstageNeuropixelsV1e' %} - {% include 'workflow.html' %} + {% include 'workflow-zip.html' %} {% endwith %}