main.yaml

name: Reproduction Materials

on:
  push:
    branches: ["main"]
  pull_request:
    branches: ["main"]
  workflow_dispatch:

jobs:
  build:
    name: Build
    runs-on: "ubuntu-latest"
    steps:
      - uses: "actions/checkout@v3"
      - name: Build Docker image.
        run: docker build -t gptools .
      - name: Verify notebooks are up to date.
        run: docker run --rm -v `pwd`:/workdir gptools pytest -v
      - name: Render the getting started notebook for Python.
        run: docker run --rm -v `pwd`:/workdir gptools cook exec getting_started:run
      - name: Render the getting started Rmarkdown for R.
        run: docker run --rm -v `pwd`:/workdir gptools cook exec getting_started_R:run
      - name: Generate figures (using ./in-docker.sh but we can't use `-it` in the Action).
        run: docker run --rm -e FAST=true -v `pwd`:/workdir gptools cook exec figures
      - name: Upload figures and reports as artifacts.
        uses: actions/upload-artifact@v3
        with:
          name: figures-reports
          path: |
            */*.html
            */*.pdf
            */*.png