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For some SL peaks, the peak is exactly at the 1st base of the CDS, so that it overlaps the start of CDS. There needs to be a better way to handle this, for example, by extending the transcript by one base upstream.
When sanitizing using AGAT, the UTR is considered supernumerary and gets removed.
The text was updated successfully, but these errors were encountered:
For some SL peaks, the peak is exactly at the 1st base of the CDS, so that it overlaps the start of CDS. There needs to be a better way to handle this, for example, by extending the transcript by one base upstream.
When sanitizing using AGAT, the UTR is considered supernumerary and gets removed.
The text was updated successfully, but these errors were encountered: