From 490fdc981d3c146f2282149aab3cc85a91b2e8ee Mon Sep 17 00:00:00 2001 From: Arwa Ibrahim <97462656+ar-ibrahim@users.noreply.github.com> Date: Thu, 17 Oct 2024 13:57:41 +0100 Subject: [PATCH 1/2] Added new response-to term --- src/ontology/imports/merged_import.owl | 2884 ++++++----------- .../response_to_chemical_stimulus_trait.tsv | 1 + src/patterns/definitions.owl | 120 +- 3 files changed, 969 insertions(+), 2036 deletions(-) diff --git a/src/ontology/imports/merged_import.owl b/src/ontology/imports/merged_import.owl index c74ba0ab..d04fbef3 100644 --- a/src/ontology/imports/merged_import.owl +++ b/src/ontology/imports/merged_import.owl @@ -7,8 +7,8 @@ Prefix(rdfs:=) Ontology( - -Annotation(owl:versionInfo "2024-09-11") + +Annotation(owl:versionInfo "2024-10-17") Declaration(Class()) Declaration(Class()) @@ -33,10 +33,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -61,7 +59,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -76,7 +73,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -239,7 +235,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -247,8 +242,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -277,6 +270,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -307,6 +301,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -319,15 +314,12 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -399,6 +391,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -414,7 +407,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -438,7 +430,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -577,7 +568,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -595,8 +585,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -637,7 +625,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -673,7 +660,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -707,7 +693,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1116,7 +1101,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1230,7 +1214,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1302,10 +1285,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1378,6 +1357,10 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1400,10 +1383,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1706,7 +1685,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1846,13 +1824,11 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1877,8 +1853,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1975,8 +1951,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1990,7 +1964,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2197,7 +2170,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2213,6 +2185,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2318,7 +2291,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2377,7 +2349,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2621,7 +2592,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2641,12 +2611,11 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2658,6 +2627,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2666,7 +2636,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2700,7 +2669,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2823,8 +2791,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3123,6 +3089,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3150,7 +3117,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3314,7 +3280,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3449,6 +3414,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3698,6 +3664,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3883,6 +3850,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4519,7 +4487,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4658,6 +4625,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4725,7 +4693,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5223,6 +5190,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5231,6 +5200,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -6246,19 +6217,15 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -6270,7 +6237,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -6295,6 +6261,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -6379,7 +6346,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -6396,7 +6362,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -6451,8 +6416,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -6503,7 +6466,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -6638,20 +6600,15 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -7121,7 +7078,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -7179,6 +7135,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -7216,7 +7173,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -7314,14 +7270,10 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -7425,7 +7377,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -7439,7 +7390,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -7452,7 +7402,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -7491,8 +7440,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -7849,7 +7796,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -7859,6 +7805,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -7969,8 +7916,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -8046,7 +7991,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -8162,8 +8106,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -8182,7 +8124,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -8291,8 +8232,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -8339,7 +8278,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -8354,7 +8292,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -8373,9 +8310,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -8400,7 +8334,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -8977,7 +8910,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -9224,7 +9156,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -9718,6 +9649,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -9779,20 +9711,10 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -9851,7 +9773,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -9861,7 +9782,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -9890,8 +9811,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -10529,7 +10448,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -10579,9 +10497,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -10602,10 +10517,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -10998,10 +10911,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -11355,7 +11266,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -12327,7 +12237,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -12350,7 +12259,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -12383,7 +12291,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -13104,9 +13011,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -13331,7 +13236,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -13368,8 +13272,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -13382,7 +13284,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -13444,9 +13345,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -13532,7 +13431,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -14168,10 +14066,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -14463,7 +14359,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -14747,7 +14642,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -14826,6 +14720,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -14896,7 +14791,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -14959,7 +14853,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -15006,6 +14899,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -15022,7 +14917,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -15042,8 +14936,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -15384,9 +15276,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -15547,7 +15436,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -15564,7 +15452,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -15637,9 +15524,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -15672,7 +15557,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -15729,8 +15613,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -15795,7 +15677,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -15824,7 +15705,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -15860,7 +15740,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -15897,7 +15776,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -15912,8 +15790,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -16060,7 +15936,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -16075,7 +15950,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -16228,13 +16102,12 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -16297,9 +16170,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -16325,7 +16195,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -16553,8 +16423,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -16587,7 +16455,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -16658,7 +16525,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -16922,7 +16788,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -18412,6 +18277,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -19474,7 +19340,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -20729,8 +20594,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -21386,7 +21249,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -21459,7 +21321,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -22342,7 +22203,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -23635,7 +23495,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -24989,6 +24848,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -25362,6 +25222,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -25606,6 +25467,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -34605,6 +34467,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -55380,7 +55243,7 @@ AnnotationAssertion(rdfs:label "caus SubObjectPropertyOf( ) SubObjectPropertyOf( ) -# Object Property: (disease disrupts) +# Object Property: (disease causes disruption of) AnnotationAssertion( "A relationship between a disease and a process where the disease process disrupts the execution of the process.") AnnotationAssertion(rdfs:label "disease causes disruption of") @@ -55949,13 +55812,6 @@ AnnotationAssertion(rdfs:label "1-a SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (2,3-dihydroxy-3-methylbutanoate) - -AnnotationAssertion(rdfs:label "2,3-dihydroxy-3-methylbutanoate") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (erlotinib) AnnotationAssertion( "A quinazoline compound having a (3-ethynylphenyl)amino group at the 4-position and two 2-methoxyethoxy groups at the 6- and 7-positions.") @@ -55975,19 +55831,6 @@ AnnotationAssertion(rdfs:label "2-a SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (3-methyl-2-oxobutanoate) - -AnnotationAssertion( "A 2-oxo monocarboxylic acid anion that is the conjugate base of 3-methyl-2-oxobutanoic acid, arising from deprotonation of the carboxy group.") -AnnotationAssertion(rdfs:label "3-methyl-2-oxobutanoate") -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (efavirenz) AnnotationAssertion( "1,4-Dihydro-2H-3,1-benzoxazin-2-one substituted at the 4 position by cyclopropylethynyl and trifluoromethyl groups (S configuration) and at the 6 position by chlorine. A non-nucleoside reverse transcriptase inhibitor with activity against HIV, it is used with other antiretrovirals for combination therapy of HIV infection.") @@ -56170,15 +56013,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (2-hydroxy-3-methyl-2-butenoic acid) - -AnnotationAssertion( "An alpha,beta-unsaturated monocarboxylic acid that is 3-methylbut-2-enoic acid in which the hydrogen at position 2 has been replaced by a hydroxy group.") -AnnotationAssertion(rdfs:label "2-hydroxy-3-methyl-2-butenoic acid") -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (1-phenylpropan-2-amine) AnnotationAssertion( "A primary amine that is isopropylamine in which a hydrogen attached to one of the methyl groups has been replaced by a phenyl group.") @@ -56276,13 +56110,6 @@ AnnotationAssertion( "lysophosphatidic acid") SubClassOf( ) -# Class: (aspartate) - -AnnotationAssertion(rdfs:label "aspartate") -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (octadec-9-enoate) AnnotationAssertion( "An octadecenoate in which the double bond is at C-9.") @@ -57543,20 +57370,6 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (D-alanine) - -AnnotationAssertion( "The D-enantiomer of alanine.") -AnnotationAssertion(rdfs:label "D-alanine") -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (Cer(d40:2)) AnnotationAssertion(rdfs:label "Cer(d40:2)") @@ -57622,21 +57435,6 @@ AnnotationAssertion( "cyclobutanes") SubClassOf( ) -# Class: ((R)-2,3-dihydroxy-3-methylbutanoic acid) - -AnnotationAssertion(rdfs:label "(R)-2,3-dihydroxy-3-methylbutanoic acid") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (2,3-dihydroxy-3-methylbutanoic acid) - -AnnotationAssertion( "A dihydroxy monocarboxylic acid that is isovaleric acid which is substituted by hydroxy groups at positions 2 and 3.") -AnnotationAssertion(rdfs:label "2,3-dihydroxy-3-methylbutanoic acid") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (aldose) AnnotationAssertion( "Aldehydic parent sugars (polyhydroxy aldehydes H[CH(OH)]nC(=O)H, n >= 2) and their intramolecular hemiacetals.") @@ -57939,6 +57737,16 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (4-hydroxyphenylpyruvic acid) + +AnnotationAssertion( "A 2-oxo monocarboxylic acid that is pyruvic acid in which one of the methyl hydrogens is substituted by a 4-hydroxyphenyl group.") +AnnotationAssertion(rdfs:label "4-hydroxyphenylpyruvic acid") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (ethanolamine) AnnotationAssertion( "A member of the class of ethanolamines that is ethane with an amino substituent at C-1 and a hydroxy substituent at C-2, making it both a primary amine and a primary alcohol.") @@ -58294,6 +58102,18 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (D-tryptophan) + +AnnotationAssertion( "The D-enantiomer of tryptophan.") +AnnotationAssertion(rdfs:label "D-tryptophan") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (alpha-D-ribose 1-phosphate) AnnotationAssertion( "The 1-phospho derivative of alpha-D-ribose.") @@ -58425,37 +58245,6 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (L-valine) - -AnnotationAssertion( "The L-enantiomer of valine.") -AnnotationAssertion(rdfs:label "L-valine") -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (2-acetyllactic acid) - -AnnotationAssertion( "A derivative of butyric acid having methyl, hydroxy and oxo substituents at the 2-, 2- and 3-positions respectively.") -AnnotationAssertion(rdfs:label "2-acetyllactic acid") -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (alanine) AnnotationAssertion( "An alpha-amino acid that consists of propionic acid bearing an amino substituent at position 2.") @@ -58538,18 +58327,6 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (3-methyl-2-oxobutanoic acid) - -AnnotationAssertion( "A 2-oxo monocarboxylic acid that is the 2-oxo derivative of isovaleric acid.") -AnnotationAssertion(rdfs:label "3-methyl-2-oxobutanoic acid") -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (protein polypeptide chain) AnnotationAssertion( "A naturally occurring polypeptide synthesized at the ribosome.") @@ -59090,6 +58867,27 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (L-tryptophan) + +AnnotationAssertion( "The L-enantiomer of tryptophan.") +AnnotationAssertion(rdfs:label "L-tryptophan") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (mycophenolic acid) AnnotationAssertion( "A member of the class of 2-benzofurans that is 2-benzofuran-1(3H)-one which is substituted at positions 4, 5, 6, and 7 by methyl, methoxy, (2E)-5-carboxy-3-methylpent-2-en-1-yl, and hydroxy groups, respectively. It is an antibiotic produced by Penicillium brevi-compactum, P. stoloniferum, P. echinulatum and related species. An immunosuppressant, it is widely used (partiularly as its sodium salt and as the 2-(morpholin-4-yl)ethyl ester prodrug, mycophenolate mofetil) to prevent tissue rejection following organ transplants and for the treatment of certain autoimmune diseases.") @@ -59263,21 +59061,6 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (L-alanine) - -AnnotationAssertion( "The L-enantiomer of alanine.") -AnnotationAssertion(rdfs:label "L-alanine") -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (D-ribose) AnnotationAssertion( "A ribose in which the chiral carbon atom furthest away from the aldehyde group (C4') has the same configuration as in D-glyceraldehyde.") @@ -59531,14 +59314,6 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (2-butenoic acid) - -AnnotationAssertion( "A butenoic acid having the double bond at position C-2.") -AnnotationAssertion(rdfs:label "2-butenoic acid") -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (3beta-hydroxy-Delta(5)-steroid) AnnotationAssertion( "Any 3beta-hydroxy-steroid that contains a double bond between positions 5 and 6.") @@ -60858,14 +60633,6 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: ((2S)-2-hydroxy-2-methyl-3-oxobutanoic acid) - -AnnotationAssertion(rdfs:label "(2S)-2-hydroxy-2-methyl-3-oxobutanoic acid") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (superoxide) AnnotationAssertion(rdfs:label "superoxide") @@ -60985,20 +60752,6 @@ AnnotationAssertion(rdfs:label "1-p SubClassOf( ) SubClassOf( ) -# Class: (branched-chain keto acid) - -AnnotationAssertion( "An oxo carboxylic acid in which the parent hydrocarbon chain has one or more alkyl substituents. Derivatives formed from the first step in the metabolism of branched-chain amino acids and can provide important information on animal health and disease.") -AnnotationAssertion(rdfs:label "branched-chain keto acid") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (branched-chain keto acid anion) - -AnnotationAssertion( "An oxo carboxylic acid anion that is the conjugate base of branched-chain keto acid resulting from the deprotonation of the carboxy group.") -AnnotationAssertion(rdfs:label "branched-chain keto acid anion") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (12-HETE) AnnotationAssertion( "A HETE that is icosa-5,8,10,14-tetraenoic acid substituted by a hydroxy group at position 12. It is a metabolite of arachidonic acid.") @@ -61265,13 +61018,6 @@ AnnotationAssertion( "acyl group") SubClassOf( ) -# Class: (adenosine bisphosphate) - -AnnotationAssertion(rdfs:label "adenosine bisphosphate") -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) - # Class: (adenosine phosphate) AnnotationAssertion(rdfs:label "adenosine phosphate") @@ -61514,18 +61260,6 @@ AnnotationAssertion(rdfs:label "asp SubClassOf( ) SubClassOf( ) -# Class: (aspartic acid) - -AnnotationAssertion( "An alpha-amino acid that consists of succinic acid bearing a single alpha-amino substituent") -AnnotationAssertion(rdfs:label "aspartic acid") -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (auxin) AnnotationAssertion( "Any of a group of compounds, both naturally occurring and synthetic, that induce cell elongation in plant stems (from Greek alphaupsilonxialphanuomega, \"to grow\").") @@ -61743,14 +61477,6 @@ AnnotationAssertion(rdfs:label "but SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (butenoic acid) - -AnnotationAssertion( "Any C4, straight-chain fatty acid containing one double bond.") -AnnotationAssertion(rdfs:label "butenoic acid") -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) - # Class: (long-chain fatty acyl-L-carnitine) AnnotationAssertion(rdfs:label "long-chain fatty acyl-L-carnitine") @@ -64457,17 +64183,6 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (D-valine) - -AnnotationAssertion( "The D-enantiomer of valine.") -AnnotationAssertion(rdfs:label "D-valine") -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (zeaxanthin) AnnotationAssertion(rdfs:label "zeaxanthin") @@ -65512,15 +65227,6 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (aspartate(2-)) - -AnnotationAssertion( "A C4-dicarboxylate that is the dianion obtained by the deprotonation of both the carboxy groups of aspartic acid.") -AnnotationAssertion(rdfs:label "aspartate(2-)") -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (D-serine residue) AnnotationAssertion(rdfs:label "D-serine residue") @@ -66167,43 +65873,6 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (L-alaninate) - -AnnotationAssertion( "The L-enantiomer of alaninate.") -AnnotationAssertion(rdfs:label "L-alaninate") -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (L-alaninium) - -AnnotationAssertion( "The L-enantiomer of alaninium.") -AnnotationAssertion(rdfs:label "L-alaninium") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (D-alaninate) - -AnnotationAssertion( "The D-enantiomer of alaninate.") -AnnotationAssertion(rdfs:label "D-alaninate") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (D-alaninium) - -AnnotationAssertion( "An alaninium that is the conjugate acid of D-alanine.") -AnnotationAssertion(rdfs:label "D-alaninium") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (alaninate) AnnotationAssertion( "An alpha-amino-acid anion that is the conjugate base of alanine, arising from deprotonation of the carboxy group.") @@ -66829,6 +66498,45 @@ AnnotationAssertion(rdfs:label "arg SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (L-tryptophanate) + +AnnotationAssertion( "The L-enantiomer of tryptophanate.") +AnnotationAssertion(rdfs:label "L-tryptophanate") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (L-tryptophanium) + +AnnotationAssertion( "The L-enantiomer of tryptophanium.") +AnnotationAssertion(rdfs:label "L-tryptophanium") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (D-tryptophanate) + +AnnotationAssertion( "The D-enantiomer of tryptophanate.") +AnnotationAssertion(rdfs:label "D-tryptophanate") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (D-tryptophanium) + +AnnotationAssertion( "The D-enantiomer of tryptophanium.") +AnnotationAssertion(rdfs:label "D-tryptophanium") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (tryptophanate) AnnotationAssertion( "An alpha-amino-acid anion that is the conjugate base of tryptophan, arising from deprotonation of the carboxy group.") @@ -67006,43 +66714,6 @@ AnnotationAssertion(rdfs:label "ser SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (L-valinate) - -AnnotationAssertion( "The L-enantiomer of valinate.") -AnnotationAssertion(rdfs:label "L-valinate") -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (L-valinium) - -AnnotationAssertion( "The L-enantiomer of valinium.") -AnnotationAssertion(rdfs:label "L-valinium") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (D-valinate) - -AnnotationAssertion( "The D-enantiomer of valinate.") -AnnotationAssertion(rdfs:label "D-valinate") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (D-valinium) - -AnnotationAssertion( "The D-enantiomer of valinium.") -AnnotationAssertion(rdfs:label "D-valinium") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (valinate) AnnotationAssertion(rdfs:label "valinate") @@ -69061,15 +68732,6 @@ AnnotationAssertion( "monosaccharide") SubClassOf( ) -# Class: (aspartate(1-)) - -AnnotationAssertion( "An alpha-amino-acid anion that is the conjugate base of aspartic acid.") -AnnotationAssertion(rdfs:label "aspartate(1-)") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (cephalotaxine) AnnotationAssertion( "A benzazepine alkaloid isolated from Cephalotaxus harringtonia.") @@ -69980,13 +69642,6 @@ AnnotationAssertion( "dihydroxy monocarboxylic acid") SubClassOf( ) -# Class: (3-oxo monocarboxylic acid anion) - -AnnotationAssertion( "An oxo monocarboxylic acid anion having the oxo group located at the 3-position (R = H or organyl group).") -AnnotationAssertion(rdfs:label "3-oxo monocarboxylic acid anion") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (4-oxo monocarboxylic acid anion) AnnotationAssertion(rdfs:label "4-oxo monocarboxylic acid anion") @@ -70025,12 +69680,6 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (butenoate) - -AnnotationAssertion(rdfs:label "butenoate") -SubClassOf( ) -SubClassOf( ) - # Class: (icosatetraenoic acid) AnnotationAssertion( "A 20-carbon, polyunsaturated fatty acid having four double bonds at unspecified positions.") @@ -70194,6 +69843,16 @@ AnnotationAssertion(rdfs:label "5be SubClassOf( ) SubClassOf( ) +# Class: (3-(4-hydroxyphenyl)pyruvate) + +AnnotationAssertion( "A 2-oxo monocarboxylic acid anion obtained by removal of a proton from the carboxylic acid group of 3-(4-hydroxyphenyl)pyruvic acid.") +AnnotationAssertion(rdfs:label "3-(4-hydroxyphenyl)pyruvate") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (5beta-cholanic acids) AnnotationAssertion( "Members of the class of cholanic acids based on a 5beta-cholane skeleton.") @@ -70202,13 +69861,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (but-2-enoate) - -AnnotationAssertion( "The conjugate base of but-2-enoic acid.") -AnnotationAssertion(rdfs:label "but-2-enoate") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (HETE) AnnotationAssertion( "Any monohydroxylated icosanoid having four double bonds.") @@ -70823,22 +70475,6 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (nucleoside bisphosphate) - -AnnotationAssertion(rdfs:label "nucleoside bisphosphate") -SubClassOf( ) - -# Class: (3-methylbut-2-enoic acid) - -AnnotationAssertion( "A methyl-branched fatty acid that is but-2-enoic acid bearing a methyl substituent at position 3.") -AnnotationAssertion(rdfs:label "3-methylbut-2-enoic acid") -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (organobromine compound) AnnotationAssertion( "A compound containing at least one carbon-bromine bond.") @@ -70929,11 +70565,6 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (adenosine 3',5'-bisphosphate) - -AnnotationAssertion(rdfs:label "adenosine 3',5'-bisphosphate") -SubClassOf( ) - # Class: (elemental sodium) AnnotationAssertion(rdfs:label "elemental sodium") @@ -72322,12 +71953,6 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (carboxymethyl group) - -AnnotationAssertion(rdfs:label "carboxymethyl group") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (fluoroform) AnnotationAssertion(rdfs:label "fluoroform") @@ -72473,6 +72098,17 @@ AnnotationAssertion(rdfs:label "(R) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (gabapentin) + +AnnotationAssertion( "A gamma-amino acid that is cyclohexane substituted at position 1 by aminomethyl and carboxymethyl groups. Used for treatment of neuropathic pain and restless legs syndrome.") +AnnotationAssertion(rdfs:label "gabapentin") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (25-hydroxycholesterol) AnnotationAssertion(rdfs:label "25-hydroxycholesterol") @@ -73291,12 +72927,6 @@ AnnotationAssertion(rdfs:label "ste SubClassOf( ) SubClassOf( ) -# Class: (3-oxo monocarboxylic acid) - -AnnotationAssertion(rdfs:label "3-oxo monocarboxylic acid") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (cyclic polypyrrole) AnnotationAssertion(rdfs:label "cyclic polypyrrole") @@ -73673,13 +73303,6 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: ((R)-2,3-dihydroxy-3-methylbutanoate) - -AnnotationAssertion(rdfs:label "(R)-2,3-dihydroxy-3-methylbutanoate") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (beta-amino-acid anion) AnnotationAssertion(rdfs:label "beta-amino-acid anion") @@ -75293,13 +74916,6 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (D-alanine zwitterion) - -AnnotationAssertion( "Zwitterionic form of D-alanine.") -AnnotationAssertion(rdfs:label "D-alanine zwitterion") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (L-leucine zwitterion) AnnotationAssertion( "Zwitterionic form of L-leucine.") @@ -75462,6 +75078,13 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (D-tryptophan zwitterion) + +AnnotationAssertion( "Zwitterionic form of D-tryptophan having an anionic carboxy group and a protonated alpha-amino group; major species at pH 7.3.") +AnnotationAssertion(rdfs:label "D-tryptophan zwitterion") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (alpha-D-ribose 1-phosphate(2-)) AnnotationAssertion( "Dianion of alpha-D-ribose 1-phosphate arising from deprotonation of both phosphate OH groups; major species at pH 7.3.") @@ -75498,22 +75121,6 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (L-valine zwitterion) - -AnnotationAssertion( "An L-alpha-amino acid zwitterion obtained by transfer of a proton from the carboxy to the amino group of L-valine; major species at pH 7.3.") -AnnotationAssertion(rdfs:label "L-valine zwitterion") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (2-acetyllactate) - -AnnotationAssertion( "The conjugate base of 2-acetyllactic acid; major species at pH 7.3.") -AnnotationAssertion(rdfs:label "2-acetyllactate") -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (hydrochlorothiazide) AnnotationAssertion( "A benzothiadiazine that is 3,4-dihydro-2H-1,2,4-benzothiadiazine 1,1-dioxide substituted by a chloro group at position 6 and a sulfonamide at 7. It is diuretic used for the treatment of hypertension and congestive heart failure.") @@ -75617,6 +75224,14 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (L-tryptophan zwitterion) + +AnnotationAssertion( "An L-alpha-amino acid zwitterion obtained by transfer of a proton from the carboxy to the amino group of L-tryptophan; major species at pH 7.3.") +AnnotationAssertion(rdfs:label "L-tryptophan zwitterion") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (glutathionate(1-)) AnnotationAssertion( "A peptide anion obtained by deprotonation of both carboxy groups and protonation of the glutamyl amino group of glutathione; major species at pH 7.3.") @@ -75683,13 +75298,6 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (L-alanine zwitterion) - -AnnotationAssertion( "Zwitterionic form of L-alanine arising from transfer of a proton from the carboxy to the amino group; major species at pH 7.3.") -AnnotationAssertion(rdfs:label "L-alanine zwitterion") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (bilirubin(2-)) AnnotationAssertion( "A dicarboxylic acid dianion obtained by deprotonation of the two carboxy groups of bilirubin; major species at pH 7.3.") @@ -75970,13 +75578,6 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: ((2S)-2-hydroxy-2-methyl-3-oxobutanoate) - -AnnotationAssertion( "conjugate base of (2S)-2-hydroxy-2-methyl-3-oxobutanoic acid.") -AnnotationAssertion(rdfs:label "(2S)-2-hydroxy-2-methyl-3-oxobutanoate") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (N-acetyl-D-amino acid anion) AnnotationAssertion( "The conjugate base of an N-acetyl-D-amino acid.") @@ -76832,19 +76433,6 @@ AnnotationAssertion(rdfs:label "oxy SubClassOf( ) SubClassOf( ) -# Class: (purine nucleoside bisphosphate) - -AnnotationAssertion( "A nucleoside bisphosphate that has a purine nucleobase.") -AnnotationAssertion(rdfs:label "purine nucleoside bisphosphate") -SubClassOf( ) -SubClassOf( ) - -# Class: (ribonucleoside bisphosphate) - -AnnotationAssertion( "A nucleoside bisphosphate where sugar of the nucleoside is ribose.") -AnnotationAssertion(rdfs:label "ribonucleoside bisphosphate") -SubClassOf( ) - # Class: (pyrimidine nucleotide-sugar) AnnotationAssertion( "A nucleotide-sugar whose nucleobase is a pyrimidine.") @@ -79287,13 +78875,6 @@ AnnotationAssertion(rdfs:label "Ile SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (D-valine zwitterion) - -AnnotationAssertion( "A D-alpha-amino acid zwitterion that is D-valine in which a proton has been transferred from the carboxy group to the amino group. It is the major species at pH 7.3.") -AnnotationAssertion(rdfs:label "D-valine zwitterion") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (Ala-Leu zwitterion) AnnotationAssertion( "A peptide zwitterion obtained by transfer of a proton from the carboxy to the amino terminus of Ala-Leu.") @@ -80404,12 +79985,6 @@ AnnotationAssertion( "human metabolite") SubClassOf( ) -# Class: (EC 4.3.1.15 (diaminopropionate ammonia-lyase) inhibitor) - -AnnotationAssertion( "An EC 4.3.1.* (ammonia-lyase) inhibitor that interferes with the action of diaminopropionate ammonia-lyase (EC 4.3.1.15).") -AnnotationAssertion(rdfs:label "EC 4.3.1.15 (diaminopropionate ammonia-lyase) inhibitor") -SubClassOf( ) - # Class: (EC 3.5.1.4 (amidase) inhibitor) AnnotationAssertion( "An EC 3.5.1.* (non-peptide linear amide C-N hydrolase) inhibitor that interferes with the action of amidase (EC 3.5.1.4).") @@ -82059,7 +81634,7 @@ SubClassOf( ObjectSomeValuesFrom( "The definition of cell is intended to represent all cells, and thus a cell is defined as a material entity and not an anatomical structure, which implies that it is part of an organism (or the entirety of one).") AnnotationAssertion(rdfs:label "cell") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) @@ -82121,6 +81696,7 @@ AnnotationAssertion(rdfs:label "sper EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -82131,6 +81707,7 @@ SubClassOf( ObjectSomeValuesFrom( "sperm") SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -82146,6 +81723,7 @@ SubClassOf( ObjectSomeValuesFrom( "female germ cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -82161,9 +81739,8 @@ SubClassOf( "oocyte") SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (oogonial cell) @@ -82202,6 +81779,7 @@ SubClassOf( ObjectSomeValuesFrom( "glioblast") SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neuroblast (sensu Vertebrata)) @@ -82209,13 +81787,14 @@ SubClassOf( ObjectSomeValuesFrom( "neuroblast (sensu Vertebrata)") SubClassOf( ) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (stem cell) AnnotationAssertion(rdfs:comment "This term applies to metazoan. For plant stem cells, consider using PO:0004011 ‘initial cell’ or its parent PO:0004010 ‘meristematic cell’.") AnnotationAssertion(rdfs:label "stem cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -82276,6 +81855,7 @@ AnnotationAssertion(rdfs:label "mono EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -82399,19 +81979,24 @@ SubClassOf( ObjectSomeValuesFrom( "ciliated cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ependymal cell) AnnotationAssertion(rdfs:label "ependymal cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelial cell) AnnotationAssertion(rdfs:label "epithelial cell") -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) @@ -82440,7 +82025,6 @@ AnnotationAssertion(rdfs:label "bloo EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (non-branched duct epithelial cell) @@ -82456,7 +82040,9 @@ SubClassOf( (squamous epithelial cell) AnnotationAssertion(rdfs:label "squamous epithelial cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesothelial cell) @@ -82464,6 +82050,7 @@ AnnotationAssertion(rdfs:label "meso SubClassOf( ) SubClassOf( ) SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (stratified epithelial cell) @@ -82476,7 +82063,7 @@ SubClassOf( ObjectSomeValuesFrom( "circulating cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (blood cell) @@ -82515,6 +82102,7 @@ AnnotationAssertion(rdfs:comment "Ma AnnotationAssertion(rdfs:label "Kupffer cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -82530,6 +82118,7 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -82546,6 +82135,7 @@ AnnotationAssertion(rdfs:label "gran EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -82569,6 +82159,7 @@ AnnotationAssertion(rdfs:label "mast EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -82666,6 +82257,7 @@ AnnotationAssertion(rdfs:comment "Fr AnnotationAssertion(rdfs:label "endothelial cell") SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (CNS neuron (sensu Vertebrata)) @@ -82714,8 +82306,7 @@ SubClassOf( ObjectSomeValuesFrom( "neuron associated cell (sensu Vertebrata)") SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (glial cell) @@ -82751,6 +82342,7 @@ AnnotationAssertion(rdfs:label "micr EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -82837,6 +82429,7 @@ AnnotationAssertion(rdfs:label "mela EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -82864,6 +82457,7 @@ SubClassOf( ObjectSomeValuesFrom( "exocrine cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (glycosaminoglycan secreting cell) @@ -82924,6 +82518,7 @@ SubClassOf( ObjectSomeValuesFrom( "endocrine cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) @@ -82960,6 +82555,7 @@ AnnotationAssertion(rdfs:label "insu EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (type B pancreatic cell) @@ -83040,6 +82636,7 @@ SubClassOf( ObjectSomeValuesFrom( "progesterone secreting cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (estradiol secreting cell) @@ -83084,6 +82681,7 @@ SubClassOf( "muscle cell") SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -83091,7 +82689,7 @@ SubClassOf( ObjectSomeValuesFrom( "cell of skeletal muscle") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (slow muscle cell) @@ -83118,7 +82716,7 @@ SubClassOf( ObjectSomeValuesFrom( "A cell that is capable of detection of a stimulus involved in sensory perception.") AnnotationAssertion(rdfs:label "sensory receptor cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -83184,9 +82782,10 @@ SubClassOf( ObjectSomeValuesFrom( (photoreceptor cell) AnnotationAssertion(rdfs:label "photoreceptor cell") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (electrically active cell) @@ -83242,18 +82841,21 @@ SubClassOf( ObjectSomeValuesFrom( (ectodermal cell) AnnotationAssertion(rdfs:label "ectodermal cell") +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesodermal cell) AnnotationAssertion(rdfs:label "mesodermal cell") +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endodermal cell) AnnotationAssertion(rdfs:label "endodermal cell") +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -83269,6 +82871,7 @@ DisjointClasses( "single nucleate cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -83276,6 +82879,7 @@ SubClassOf( ObjectSomeValuesFrom( "multinucleate cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -83350,8 +82954,18 @@ SubClassOf( ObjectSomeValuesFrom( (stratified squamous epithelial cell) AnnotationAssertion(rdfs:label "stratified squamous epithelial cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (stratified cuboidal epithelial cell) + +AnnotationAssertion(rdfs:label "stratified cuboidal epithelial cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (Merkel cell) @@ -83369,21 +82983,22 @@ SubClassOf( (eukaryotic cell) AnnotationAssertion(rdfs:label "eukaryotic cell") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (Eumycetozoan cell) AnnotationAssertion(rdfs:label "Eumycetozoan cell") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (eye photoreceptor cell) AnnotationAssertion(rdfs:label "eye photoreceptor cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -83465,8 +83080,9 @@ SubClassOf( ObjectSomeValuesFrom( (pulmonary alveolar epithelial cell) AnnotationAssertion(rdfs:label "pulmonary alveolar epithelial cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lysozyme secreting cell) @@ -83540,6 +83156,7 @@ SubClassOf( ObjectSomeValuesFrom( "scleral cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -83549,6 +83166,7 @@ SubClassOf( ObjectSomeValuesFrom( "choroidal cell of the eye") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -83557,7 +83175,7 @@ SubClassOf( ObjectSomeValuesFrom( "extraembryonic cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trophoblast cell) @@ -83620,11 +83238,11 @@ SubClassOf( ObjectSomeValuesFrom( (animal zygote) AnnotationAssertion(rdfs:label "animal zygote") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (tracheoblast) @@ -83647,7 +83265,7 @@ AnnotationAssertion(rdfs:label "hemo SubClassOf( ) SubClassOf( ) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tendon cell) @@ -83756,8 +83374,7 @@ SubClassOf( ObjectSomeValuesFrom( "follicle stem cell (sensu Arthropoda)") SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (follicular dendritic cell) @@ -83803,6 +83420,7 @@ AnnotationAssertion(rdfs:label "dend EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -83892,10 +83510,9 @@ SubClassOf( ObjectSomeValuesFrom( "A somatic epithelial cell of the insect egg chamber.") AnnotationAssertion(rdfs:label "follicle cell of egg chamber") SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (connective tissue type mast cell) @@ -83945,7 +83562,7 @@ SubClassOf( "granulosa cell") SubClassOf( ) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (type D enteroendocrine cell) @@ -84025,6 +83642,7 @@ SubClassOf( ObjectSomeValuesFrom( "macrophage derived foam cell") SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -84033,21 +83651,21 @@ SubClassOf( ObjectSomeValuesFrom( "phagocyte (sensu Vertebrata)") SubClassOf( ) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (fungal cell) AnnotationAssertion(rdfs:label "fungal cell") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (syncytiotrophoblast cell) AnnotationAssertion(rdfs:label "syncytiotrophoblast cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (afferent neuron) @@ -84121,6 +83739,7 @@ AnnotationAssertion(rdfs:label "proe EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -84143,6 +83762,7 @@ SubClassOf( ObjectSomeValuesFrom( "basophilic erythroblast") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -84152,6 +83772,7 @@ SubClassOf( ObjectSomeValuesFrom( "polychromatophilic erythroblast") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -84212,6 +83833,7 @@ SubClassOf( ) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -84225,6 +83847,7 @@ SubClassOf( ObjectSomeValuesFrom( "reticulocyte") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -84247,6 +83870,7 @@ AnnotationAssertion(rdfs:label "prom EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -84276,6 +83900,7 @@ AnnotationAssertion(rdfs:label "angi EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -84306,6 +83931,7 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -84344,6 +83970,7 @@ AnnotationAssertion(rdfs:comment "Ma AnnotationAssertion(rdfs:label "peritoneal macrophage") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -84361,6 +83988,7 @@ AnnotationAssertion(rdfs:label "alve EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -84453,6 +84081,7 @@ AnnotationAssertion(rdfs:label "eosi EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -84483,6 +84112,7 @@ AnnotationAssertion(rdfs:label "baso EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -84578,6 +84208,7 @@ AnnotationAssertion(rdfs:label "hepa EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -84715,6 +84346,7 @@ SubClassOf( ObjectSomeValuesFrom( "primary spermatocyte") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -84723,6 +84355,7 @@ SubClassOf( ObjectSomeValuesFrom( "secondary spermatocyte") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -84765,7 +84398,7 @@ SubClassOf( (gut absorptive cell) AnnotationAssertion(rdfs:label "gut absorptive cell") -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (glutamatergic neuron) @@ -84783,6 +84416,7 @@ AnnotationAssertion(rdfs:label "musc EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -84794,6 +84428,15 @@ AnnotationAssertion(rdfs:label "radi SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (cerebrospinal fluid secreting cell) + +AnnotationAssertion(rdfs:label "cerebrospinal fluid secreting cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (stellate interneuron) AnnotationAssertion(rdfs:label "stellate interneuron") @@ -84831,11 +84474,12 @@ SubClassOf( (choroid plexus epithelial cell) AnnotationAssertion(rdfs:label "choroid plexus epithelial cell") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (leptomeningeal cell) @@ -84894,7 +84538,7 @@ SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -84940,13 +84584,10 @@ SubClassOf( (rod bipolar cell) AnnotationAssertion(rdfs:label "rod bipolar cell") -SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (cone retinal bipolar cell) @@ -84970,6 +84611,7 @@ SubClassOf( ObjectSomeValuesFrom( "myeloid cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -85063,6 +84705,7 @@ AnnotationAssertion(rdfs:label "mult EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (multinuclear odontoclast) @@ -85126,6 +84769,7 @@ AnnotationAssertion(rdfs:comment "Pl AnnotationAssertion(rdfs:label "plasma cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -85162,6 +84806,7 @@ SubClassOf( ObjectSomeValuesFrom( "alpha-beta T cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) @@ -85238,6 +84883,7 @@ AnnotationAssertion(rdfs:comment "No AnnotationAssertion(rdfs:label "gamma-delta T cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (immature gamma-delta T cell) @@ -85286,6 +84932,7 @@ AnnotationAssertion(rdfs:comment "No AnnotationAssertion(rdfs:label "immature single positive thymocyte") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -85300,6 +84947,7 @@ AnnotationAssertion(rdfs:comment "No AnnotationAssertion(rdfs:label "DN2 thymocyte") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -85310,6 +84958,7 @@ AnnotationAssertion(rdfs:comment "Th AnnotationAssertion(rdfs:label "DN3 thymocyte") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -85321,6 +84970,7 @@ AnnotationAssertion(rdfs:comment "No AnnotationAssertion(rdfs:label "DN4 thymocyte") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -85477,6 +85127,7 @@ AnnotationAssertion(rdfs:comment "Mo AnnotationAssertion(rdfs:label "pro-NK cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -85491,6 +85142,7 @@ AnnotationAssertion(rdfs:comment "Hu AnnotationAssertion(rdfs:label "pro-B cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -85530,6 +85182,7 @@ AnnotationAssertion(rdfs:label "mast EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -85591,7 +85244,9 @@ AnnotationAssertion(rdfs:comment "Ma AnnotationAssertion(rdfs:label "hematopoietic multipotent progenitor cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -85737,6 +85392,7 @@ AnnotationAssertion(rdfs:comment "Ma AnnotationAssertion(rdfs:label "classical monocyte") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -85750,6 +85406,7 @@ AnnotationAssertion(rdfs:comment "Ma AnnotationAssertion(rdfs:label "elicited macrophage") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -85789,6 +85446,7 @@ AnnotationAssertion(rdfs:comment "Ma AnnotationAssertion(rdfs:label "lymph node macrophage") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -85824,6 +85482,7 @@ AnnotationAssertion(rdfs:comment "Ma AnnotationAssertion(rdfs:label "splenic marginal zone macrophage") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -85837,6 +85496,7 @@ AnnotationAssertion(rdfs:comment "Ma AnnotationAssertion(rdfs:label "splenic metallophillic macrophage") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -85849,6 +85509,7 @@ AnnotationAssertion(rdfs:comment "Ma AnnotationAssertion(rdfs:label "splenic red pulp macrophage") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -85865,6 +85526,7 @@ AnnotationAssertion(rdfs:comment "Ma AnnotationAssertion(rdfs:label "splenic white pulp macrophage") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -85883,6 +85545,7 @@ AnnotationAssertion(rdfs:label "peri EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -85926,6 +85589,7 @@ AnnotationAssertion(rdfs:comment "Ma AnnotationAssertion(rdfs:label "myeloid suppressor cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -85948,6 +85612,7 @@ SubClassOf( ObjectSomeValuesFrom( "DN1 thymic pro-T cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -86338,6 +86003,7 @@ AnnotationAssertion(rdfs:comment "Th AnnotationAssertion(rdfs:label "pre-natural killer cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -86348,6 +86014,7 @@ AnnotationAssertion(rdfs:comment "Th AnnotationAssertion(rdfs:label "CD16-positive, CD56-dim natural killer cell, human") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -86910,6 +86577,7 @@ AnnotationAssertion(rdfs:comment "Ce AnnotationAssertion(rdfs:label "Kit and Sca1-positive hematopoietic stem cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -86966,6 +86634,7 @@ AnnotationAssertion(rdfs:label "CD34 EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -86981,6 +86650,7 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -87006,6 +86676,7 @@ AnnotationAssertion(rdfs:comment "Ce AnnotationAssertion(rdfs:label "CD34-positive, CD38-negative hematopoietic stem cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -87022,6 +86693,7 @@ AnnotationAssertion(rdfs:label "Kit- EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -87053,6 +86725,7 @@ AnnotationAssertion(rdfs:label "CD7- EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -87064,6 +86737,7 @@ AnnotationAssertion(rdfs:comment "Th AnnotationAssertion(rdfs:label "CD7-positive lymphoid progenitor cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -87076,6 +86750,7 @@ AnnotationAssertion(rdfs:label "comm EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -87128,7 +86803,7 @@ SubClassOf( "bone cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (non-terminally differentiated osteoblast) @@ -87220,6 +86895,7 @@ AnnotationAssertion(rdfs:comment "Th AnnotationAssertion(rdfs:label "CD14-positive monocyte") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -87267,6 +86943,7 @@ AnnotationAssertion(rdfs:label "comm EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -87344,6 +87021,7 @@ SubClassOf( ObjectSomeValuesFrom( "erythroid progenitor cell, mammalian") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -87383,6 +87061,7 @@ SubClassOf( ObjectSomeValuesFrom( "group 3 innate lymphoid cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (CD34-negative, CD117-positive innate lymphoid cell, human) @@ -87390,6 +87069,7 @@ SubClassOf( ObjectSomeValuesFrom( "CD34-negative, CD117-positive innate lymphoid cell, human") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -87407,6 +87087,7 @@ SubClassOf( ObjectSomeValuesFrom( "CD34-positive, CD56-positive, CD117-positive common innate lymphoid precursor, human") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -87446,6 +87127,7 @@ AnnotationAssertion(rdfs:comment "Ty AnnotationAssertion(rdfs:label "lymphocyte of B lineage, CD19-positive") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -87453,7 +87135,7 @@ SubClassOf( ObjectSomeValuesFrom( (B cell, CD19-positive) AnnotationAssertion(rdfs:label "B cell, CD19-positive") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -87467,12 +87149,12 @@ SubClassOf( ObjectSomeValuesFrom( (CD8-positive, alpha-beta memory T cell, CD45RO-positive) AnnotationAssertion(rdfs:label "CD8-positive, alpha-beta memory T cell, CD45RO-positive") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -87480,12 +87162,12 @@ SubClassOf( ObjectSomeValuesFrom( (CD4-positive, alpha-beta memory T cell, CD45RO-positive) AnnotationAssertion(rdfs:label "CD4-positive, alpha-beta memory T cell, CD45RO-positive") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -87558,6 +87240,7 @@ AnnotationAssertion(rdfs:comment "Ma AnnotationAssertion(rdfs:label "CD34-positive, CD38-positive megakaryocyte erythroid progenitor cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -87569,6 +87252,7 @@ AnnotationAssertion(rdfs:comment "Ma AnnotationAssertion(rdfs:label "Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -87613,6 +87297,7 @@ AnnotationAssertion(rdfs:label "pre- EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -87637,6 +87322,7 @@ AnnotationAssertion(rdfs:comment "Ma AnnotationAssertion(rdfs:label "Kit-positive macrophage dendritic cell progenitor") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -87705,6 +87391,7 @@ AnnotationAssertion(rdfs:comment "Ce AnnotationAssertion(rdfs:label "Kit-negative, Ly-76 high orthochromatophilic erythroblasts") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -87718,6 +87405,7 @@ AnnotationAssertion(rdfs:comment "Ma AnnotationAssertion(rdfs:label "CD71-negative, GlyA-positive orthochromatic erythroblast") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -87746,6 +87434,7 @@ AnnotationAssertion(rdfs:comment "Ma AnnotationAssertion(rdfs:label "GlyA-positive erythrocyte") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -87755,6 +87444,7 @@ AnnotationAssertion(rdfs:comment "Ma AnnotationAssertion(rdfs:label "Ly-76 high positive erythrocyte") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -87764,6 +87454,7 @@ AnnotationAssertion(rdfs:comment "Ma AnnotationAssertion(rdfs:label "CD34-positive, CD41-positive, CD42-positive megakaryocyte progenitor cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -87775,6 +87466,7 @@ AnnotationAssertion(rdfs:comment "Ma AnnotationAssertion(rdfs:label "Kit-positive megakaryocyte progenitor cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -87790,6 +87482,7 @@ AnnotationAssertion(rdfs:comment "Ma AnnotationAssertion(rdfs:label "CD34-positive, CD41-positive, CD42-negative megakaryocyte progenitor cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -87801,6 +87494,7 @@ AnnotationAssertion(rdfs:comment "Ma AnnotationAssertion(rdfs:label "CD34-negative, CD41-positive, CD42-positive megakaryocyte cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -87812,6 +87506,7 @@ AnnotationAssertion(rdfs:comment "Ma AnnotationAssertion(rdfs:label "CD9-positive, CD41-positive megakaryocyte cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -87823,6 +87518,7 @@ AnnotationAssertion(rdfs:label "baso EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -87858,6 +87554,7 @@ SubClassOf( ObjectSomeValuesFrom( "hematopoietic lineage restricted progenitor cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -87869,6 +87566,7 @@ AnnotationAssertion(rdfs:comment "Th AnnotationAssertion(rdfs:label "hematopoietic oligopotent progenitor cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -88661,7 +88359,6 @@ AnnotationAssertion(rdfs:label "cili SubClassOf( ) SubClassOf( ) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (dental pulp cell) @@ -88692,6 +88389,7 @@ SubClassOf( ObjectSomeValuesFrom( "corneocyte") SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -88765,6 +88463,8 @@ SubClassOf( ObjectSomeValuesFrom( "follicular cell of ovary") SubClassOf( ) SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (folliculostellate cell of pars distalis of adenohypophysis) @@ -88832,6 +88532,7 @@ AnnotationAssertion(rdfs:label "glom EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -89291,14 +88992,14 @@ SubClassOf( ObjectSomeValuesFrom( "neural cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (connective tissue cell) AnnotationAssertion(rdfs:label "connective tissue cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (embryonic cell (metazoa)) @@ -89360,7 +89061,7 @@ SubClassOf( (ciliated cell of the bronchus) AnnotationAssertion(rdfs:label "ciliated cell of the bronchus") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -89392,6 +89093,7 @@ AnnotationAssertion(rdfs:comment "Hu AnnotationAssertion(rdfs:label "CD56-positive, CD161-positive immature natural killer cell, human") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -89417,6 +89119,7 @@ SubClassOf( "decidual natural killer cell, human") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -89428,6 +89131,7 @@ AnnotationAssertion(rdfs:comment "Hu AnnotationAssertion(rdfs:label "CD56-negative, CD161-positive immature natural killer cell, human") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -89441,6 +89145,7 @@ AnnotationAssertion(rdfs:comment "Ma AnnotationAssertion(rdfs:label "CD27-low, CD11b-low immature natural killer cell, mouse") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -89454,6 +89159,7 @@ SubClassOf( ObjectSomeValuesFrom( "Dx5-negative, NK1.1-positive immature natural killer cell, mouse") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -89463,6 +89169,7 @@ SubClassOf( ObjectSomeValuesFrom( "CD27-high, CD11b-high natural killer cell, mouse") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -89473,6 +89180,7 @@ SubClassOf( ObjectSomeValuesFrom( "CD27-low, CD11b-high natural killer cell, mouse") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -89483,6 +89191,7 @@ SubClassOf( ObjectSomeValuesFrom( "CD27-high, CD11b-low natural killer cell, mouse") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -89512,6 +89221,7 @@ SubClassOf( ObjectSomeValuesFrom( "fetal liver hematopoietic progenitor cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -89527,6 +89237,7 @@ SubClassOf( ObjectSomeValuesFrom( "yolk sac hematopoietic stem cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -89540,6 +89251,7 @@ SubClassOf( ObjectSomeValuesFrom( "primitive red blood cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -89559,6 +89271,7 @@ SubClassOf( ObjectSomeValuesFrom( "fetal derived definitive erythrocyte") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -89583,6 +89296,7 @@ SubClassOf( ObjectSomeValuesFrom( "primitive erythroid progenitor") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -89646,8 +89360,8 @@ SubClassOf( "myotube") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ear hair cell) @@ -89661,9 +89375,10 @@ SubClassOf( ObjectSomeValuesFrom( (Schwann cell precursor) AnnotationAssertion(rdfs:label "Schwann cell precursor") -SubClassOf( ) SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (immature Schwann cell) @@ -89780,6 +89495,7 @@ SubClassOf( ObjectSomeValuesFrom( "mature T cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -89828,6 +89544,7 @@ AnnotationAssertion(rdfs:comment "ET AnnotationAssertion(rdfs:label "early T lineage precursor") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -89952,6 +89669,7 @@ AnnotationAssertion(rdfs:comment "No AnnotationAssertion(rdfs:label "NK1.1-positive natural killer cell, mouse") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -90101,6 +89819,7 @@ AnnotationAssertion(rdfs:label "bone EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -90112,6 +89831,7 @@ SubClassOf( ObjectSomeValuesFrom( "adipose macrophage") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -90239,7 +89959,7 @@ SubClassOf( ObjectSomeValuesFrom( "From Onard of the FMA: Cardiac muscle cell or cardiac myocyte is a striated muscle cell. Cardiocyte on the other hand is any cell in the heart which includes cells other than muscle cells (e.g. endothelial cell of endocardium). Unless there is a consensus among anatomists that cardiocytes refer only to muscle cells, we will treat them as a general class of cells in the heart.") AnnotationAssertion(rdfs:label "cardiocyte") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (fetal cardiomyocyte) @@ -90303,6 +90023,7 @@ SubClassOf( ObjectSomeValuesFrom( (renal filtration cell) AnnotationAssertion(rdfs:label "renal filtration cell") +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -90408,12 +90129,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (embryonic blood vessel endothelial progenitor cell) - -AnnotationAssertion(rdfs:comment "See CL:0002619.") -AnnotationAssertion(rdfs:label "embryonic blood vessel endothelial progenitor cell") -SubClassOf( ) - # Class: (fibroblast of the aortic adventitia) AnnotationAssertion(rdfs:label "fibroblast of the aortic adventitia") @@ -90497,7 +90212,7 @@ SubClassOf( ObjectSomeValuesFrom( "hair follicle cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inner root sheath cell) @@ -90877,7 +90592,7 @@ SubClassOf( ObjectSomeValuesFrom( "gingival epithelial cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (prostate stromal cell) @@ -91059,6 +90774,7 @@ SubClassOf( "natural helper lymphocyte") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -91122,7 +90838,11 @@ SubClassOf( (multi-ciliated epithelial cell) AnnotationAssertion(rdfs:label "multi-ciliated epithelial cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (auditory epithelial supporting cell) @@ -91181,6 +90901,7 @@ AnnotationAssertion(rdfs:comment "un AnnotationAssertion(rdfs:label "preameloblast") SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -91195,6 +90916,7 @@ SubClassOf( "precementoblast") SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (preodontoblast) @@ -91298,6 +91020,7 @@ SubClassOf( "A non-polarised cell precursor cell that is part of some mesenchyme, is associated with the cell matrix but is not connected to other cells and is capable of migration.") AnnotationAssertion(rdfs:label "mesenchymal cell") SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -91410,6 +91133,13 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (salivary gland cell) + +AnnotationAssertion( "Any cell in a salivary gland.") +AnnotationAssertion(rdfs:label "salivary gland cell") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (enteroendocrine cell of small intestine) AnnotationAssertion(rdfs:label "enteroendocrine cell of small intestine") @@ -91449,6 +91179,7 @@ SubClassOf( ObjectSomeValuesFrom( "Peyer's patch follicular dendritic cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -91907,15 +91638,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (epithelial cell of alveolus of lung) - -AnnotationAssertion( "An epithelial cell that is part_of a alveolus of lung.") -AnnotationAssertion(rdfs:comment "May be merged with pneumocyte in future") -AnnotationAssertion(rdfs:label "epithelial cell of alveolus of lung") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (mononuclear cell of bone marrow) AnnotationAssertion( "A mononuclear cell that is part_of a bone marrow.") @@ -92107,6 +91829,7 @@ AnnotationAssertion(rdfs:comment "Ma AnnotationAssertion(rdfs:label "CD25+ mast cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -92122,6 +91845,7 @@ SubClassOf( ObjectSomeValuesFrom( "progenitor cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -92260,6 +91984,7 @@ SubClassOf( "Any serous secreting cell that is part of the tracheobronchial epithelium.") AnnotationAssertion(rdfs:label "tracheobronchial serous cell"@en) EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -92429,15 +92154,17 @@ SubClassOf( ObjectSomeValuesFrom( (lung ciliated cell) AnnotationAssertion(rdfs:label "lung ciliated cell") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (lung secretory cell) AnnotationAssertion(rdfs:label "lung secretory cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trophectodermal cell) @@ -92753,9 +92480,9 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) -# Class: (enterocyte of colon) +# Class: (colonocyte) -AnnotationAssertion(rdfs:label "enterocyte of colon") +AnnotationAssertion(rdfs:label "colonocyte") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -93094,6 +92821,7 @@ SubClassOf( ObjectSomeValuesFrom( "parietal epithelial cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -93268,7 +92996,7 @@ SubClassOf( ObjectSomeValuesFrom( "A cell that is part of a kidney.") AnnotationAssertion(rdfs:label "kidney cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (kidney interstitial cell) @@ -93357,14 +93085,14 @@ SubClassOf( ObjectSomeValuesFrom( "lower urinary tract cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ureteral cell) AnnotationAssertion(rdfs:label "ureteral cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (kidney nerve cell) @@ -94247,6 +93975,7 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (seminal vesicle glandular cell) @@ -94475,14 +94204,14 @@ SubClassOf( ObjectSomeValuesFrom( "inner cell mass cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sebaceous gland cell) AnnotationAssertion(rdfs:label "sebaceous gland cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cardiac septum cell) @@ -95000,17 +94729,15 @@ SubClassOf( ObjectSomeValuesFrom( (sst GABAergic cortical interneuron) AnnotationAssertion(rdfs:label "sst GABAergic cortical interneuron") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pvalb GABAergic cortical interneuron) AnnotationAssertion(rdfs:label "pvalb GABAergic cortical interneuron") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lateral ganglionic eminence derived neuron) @@ -95054,9 +94781,9 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (caudal ganglionic eminence derived interneuron) +# Class: (caudal ganglionic eminence derived cortical interneuron) -AnnotationAssertion(rdfs:label "caudal ganglionic eminence derived interneuron") +AnnotationAssertion(rdfs:label "caudal ganglionic eminence derived cortical interneuron") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -95251,7 +94978,6 @@ SubClassOf( (glycinergic amacrine cell) -AnnotationAssertion(Annotation( "https://doi.org/10.1016/j.cell.2020.08.013") "An amacrine cell that uses glycine as a neurotransmitter.") AnnotationAssertion(rdfs:label "glycinergic amacrine cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -95268,7 +94994,7 @@ SubClassOf( "interstitial cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (valve interstitial cell) @@ -95315,6 +95041,7 @@ SubClassOf( ObjectSomeValuesFrom( "TCR-positive macrophage") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ureteric bud cell) @@ -95536,9 +95263,10 @@ SubClassOf( ObjectSomeValuesFrom( (pre-granulosa cell) AnnotationAssertion(rdfs:label "pre-granulosa cell") +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (cycling B cell) @@ -95656,6 +95384,21 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (squamous granulosa cell) + +AnnotationAssertion(rdfs:label "squamous granulosa cell") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cuboidal granulosa cell) + +AnnotationAssertion(rdfs:label "cuboidal granulosa cell") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (enteroglial cell) AnnotationAssertion(rdfs:label "enteroglial cell") @@ -95714,6 +95457,22 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (syncytial cell) + +AnnotationAssertion(rdfs:label "syncytial cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (intestinal villus capillary endothelial cell) + +AnnotationAssertion(rdfs:label "intestinal villus capillary endothelial cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (mitochondrion inheritance) AnnotationAssertion(rdfs:label "mitochondrion inheritance") @@ -95787,7 +95546,6 @@ AnnotationAssertion(rdfs:label "urea EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (citrulline metabolic process) @@ -95849,7 +95607,6 @@ AnnotationAssertion(rdfs:label "sulf EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (sulfur amino acid biosynthetic process) @@ -95858,7 +95615,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (sulfur amino acid catabolic process) @@ -95867,7 +95623,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (sulfur amino acid transmembrane transporter activity) @@ -95933,7 +95688,6 @@ SubClassOf( "tryptophan biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) @@ -96065,12 +95819,12 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (sulfite transport) +# Class: (sulfite transmembrane transport) -AnnotationAssertion(rdfs:label "sulfite transport") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +AnnotationAssertion(rdfs:label "sulfite transmembrane transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) # Class: (sulfite transmembrane transporter activity) @@ -96097,8 +95851,6 @@ SubClassOf( ObjectSomeValuesFrom( "autophagy of mitochondrion") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) -SubClassOf( ) # Class: (proteasome complex) @@ -96196,7 +95948,7 @@ SubClassOf( "Chromosomes include parts that are not part of the chromatin. Examples include the kinetochore.") AnnotationAssertion(rdfs:label "chromatin") -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (nucleosome) @@ -97760,7 +97512,6 @@ SubClassOf( ObjectSomeValuesFrom( (positive regulation of protein phosphorylation) -AnnotationAssertion(rdfs:comment "Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.") AnnotationAssertion(rdfs:label "positive regulation of protein phosphorylation") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -99788,9 +99539,9 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) -# Class: (arachidonic acid metabolite production involved in inflammatory response) +# Class: (arachidonate metabolite production involved in inflammatory response) -AnnotationAssertion(rdfs:label "arachidonic acid metabolite production involved in inflammatory response") +AnnotationAssertion(rdfs:label "arachidonate metabolite production involved in inflammatory response") SubClassOf( ) # Class: (prostaglandin production involved in inflammatory response) @@ -101752,7 +101503,6 @@ AnnotationAssertion(rdfs:label "brad EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (regionalization) @@ -103202,7 +102952,7 @@ SubClassOf( "chromatin binding") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) # Class: (double-stranded DNA binding) @@ -103267,15 +103017,6 @@ SubClassOf( ObjectSomeValuesFrom( "catalytic activity") SubClassOf( ) -# Class: (4-aminobutyrate transaminase activity) - -AnnotationAssertion(rdfs:label "4-aminobutyrate transaminase activity") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (5-aminolevulinate synthase activity) AnnotationAssertion(rdfs:label "5-aminolevulinate synthase activity") @@ -103287,16 +103028,6 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (acetolactate synthase activity) - -AnnotationAssertion(rdfs:comment "Note that this function was formerly EC:4.1.3.18.") -AnnotationAssertion(rdfs:label "acetolactate synthase activity") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (acetylcholinesterase activity) AnnotationAssertion(rdfs:label "acetylcholinesterase activity") @@ -103323,11 +103054,6 @@ SubClassOf( ObjectSomeValuesFrom( "alkaline phosphatase activity") SubClassOf( ) -# Class: (branched-chain-amino-acid transaminase activity) - -AnnotationAssertion(rdfs:label "branched-chain-amino-acid transaminase activity") -SubClassOf( ) - # Class: (carnitine O-palmitoyltransferase activity) AnnotationAssertion(rdfs:label "carnitine O-palmitoyltransferase activity") @@ -103376,14 +103102,6 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (dihydroxy-acid dehydratase activity) - -AnnotationAssertion(rdfs:label "dihydroxy-acid dehydratase activity") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (endopeptidase activity) AnnotationAssertion(rdfs:label "endopeptidase activity") @@ -103458,7 +103176,6 @@ SubClassOf( ObjectSomeValuesFrom( (hydroxymethylbilane synthase activity) -AnnotationAssertion(rdfs:comment "Note that this function was formerly EC:4.3.1.8.") AnnotationAssertion(rdfs:label "hydroxymethylbilane synthase activity") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -103476,16 +103193,6 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (ketol-acid reductoisomerase activity) - -AnnotationAssertion(rdfs:label "ketol-acid reductoisomerase activity") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (lipoprotein lipase activity) AnnotationAssertion(rdfs:label "lipoprotein lipase activity") @@ -103681,17 +103388,25 @@ AnnotationAssertion(rdfs:label "pyru SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (triglyceride lipase activity) +# Class: (triacylglycerol lipase activity) -AnnotationAssertion(rdfs:label "triglyceride lipase activity") +AnnotationAssertion(rdfs:label "triacylglycerol lipase activity") SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (L-tyrosine-2-oxoglutarate transaminase activity) + +AnnotationAssertion(rdfs:label "L-tyrosine-2-oxoglutarate transaminase activity") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (xanthine dehydrogenase activity) AnnotationAssertion(rdfs:label "xanthine dehydrogenase activity") @@ -104299,16 +104014,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (L-valine transmembrane transporter activity) - -AnnotationAssertion(rdfs:label "L-valine transmembrane transporter activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (creatine transmembrane transporter activity) AnnotationAssertion(rdfs:label "creatine transmembrane transporter activity") @@ -104377,6 +104082,7 @@ SubClassOf( ObjectSomeValuesFrom( "nucleotide-sugar transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) SubClassOf( ) @@ -104433,13 +104139,6 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (glucose transmembrane transporter activity) - -AnnotationAssertion(rdfs:label "glucose transmembrane transporter activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (taurine transmembrane transporter activity) AnnotationAssertion(rdfs:label "taurine transmembrane transporter activity") @@ -104492,7 +104191,6 @@ SubClassOf( (binding) -AnnotationAssertion(rdfs:comment "Note that this term is in the subset of terms that should not be used for direct, manual gene product annotation. Please choose a more specific child term, or request a new one if no suitable term is available. For ligands that bind to signal transducing receptors, consider the molecular function term 'receptor binding ; GO:0005102' and its children.") AnnotationAssertion(rdfs:label "binding") SubClassOf( ) @@ -104813,22 +104511,6 @@ AnnotationAssertion(rdfs:label "mito SubClassOf( ) SubClassOf( ) -# Class: (mitochondrial respirasome) - -AnnotationAssertion(rdfs:label "mitochondrial respirasome") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - -# Class: (mitochondrial proton-transporting ATP synthase complex) - -AnnotationAssertion(rdfs:label "mitochondrial proton-transporting ATP synthase complex") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (mitochondrial matrix) AnnotationAssertion(rdfs:label "mitochondrial matrix") @@ -105219,14 +104901,6 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (acetolactate synthase complex) - -AnnotationAssertion(rdfs:comment "See also the molecular function term 'acetolactate synthase activity ; GO:0003984'.") -AnnotationAssertion(rdfs:label "acetolactate synthase complex") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (carbohydrate metabolic process) AnnotationAssertion(rdfs:label "carbohydrate metabolic process") @@ -105374,7 +105048,6 @@ AnnotationAssertion(rdfs:label "amin EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (aminoglycan biosynthetic process) @@ -105383,7 +105056,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (glycosaminoglycan biosynthetic process) @@ -105399,7 +105071,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (glycosaminoglycan catabolic process) @@ -105445,7 +105116,6 @@ SubClassOf( "UDP-N-acetylglucosamine metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) # Class: (UDP-N-acetylglucosamine biosynthetic process) @@ -105912,7 +105582,7 @@ SubClassOf( "chromatin organization") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) # Class: (nucleosome assembly) @@ -106019,7 +105689,6 @@ AnnotationAssertion(rdfs:label "tran EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -106177,13 +105846,6 @@ AnnotationAssertion(rdfs:label "argi EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -# Class: (arginine biosynthetic process) - -AnnotationAssertion(rdfs:label "arginine biosynthetic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - # Class: (arginine catabolic process) AnnotationAssertion(rdfs:label "arginine catabolic process") @@ -106212,29 +105874,6 @@ SubClassOf( ) SubClassOf( ) -# Class: (aspartate metabolic process) - -AnnotationAssertion(rdfs:label "aspartate metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - -# Class: (aspartate biosynthetic process) - -AnnotationAssertion(rdfs:label "aspartate biosynthetic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) - -# Class: (aspartate catabolic process) - -AnnotationAssertion(rdfs:label "aspartate catabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) - # Class: (cysteine metabolic process) AnnotationAssertion(rdfs:label "cysteine metabolic process") @@ -106272,22 +105911,21 @@ SubClassOf( ) SubClassOf( ) -# Class: (glutamate catabolic process via 2-oxoglutarate) - -AnnotationAssertion(rdfs:label "glutamate catabolic process via 2-oxoglutarate") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - -# Class: (glutamate decarboxylation to succinate) +# Class: (gamma-aminobutyrate shunt) AnnotationAssertion(rdfs:comment "Note that the third step in this pathway (conversion of succinate semialdehyde to succinate) can be catalyzed by NAD-dependent or NADP-dependent succinate semialdehyde dehydrogenase (EC:1.2.1.24 and EC:1.2.1.79, respectively).") -AnnotationAssertion(rdfs:label "glutamate decarboxylation to succinate") +AnnotationAssertion(rdfs:label "gamma-aminobutyrate shunt") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +DisjointClasses( ObjectSomeValuesFrom( )) +DisjointClasses( ObjectSomeValuesFrom( )) # Class: (glutamine metabolic process) @@ -106476,16 +106114,16 @@ SubClassOf( (tryptophan metabolic process) AnnotationAssertion(rdfs:label "tryptophan metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) # Class: (tryptophan catabolic process) AnnotationAssertion(rdfs:label "tryptophan catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) @@ -106533,7 +106171,6 @@ SubClassOf( "cellular modified amino acid metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) # Class: (biogenic amine metabolic process) @@ -106618,8 +106255,10 @@ SubClassOf( "serotonin biosynthetic process from tryptophan") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) +SubClassOf( ) SubClassOf( ) +SubClassOf( ) # Class: (thyroid hormone generation) @@ -106820,11 +106459,10 @@ SubClassOf( "acyl-CoA metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ) +SubClassOf( ) # Class: (neutral lipid metabolic process) @@ -106897,7 +106535,6 @@ AnnotationAssertion(rdfs:label "phos EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (phosphatidylinositol biosynthetic process) @@ -106924,7 +106561,6 @@ SubClassOf( "sphingolipid metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) # Class: (sphingosine metabolic process) @@ -107823,7 +107459,6 @@ SubClassOf( (response to stress) -AnnotationAssertion(rdfs:comment "Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.") AnnotationAssertion(rdfs:label "response to stress") SubClassOf( ) @@ -108586,7 +108221,16 @@ SubClassOf( "gamete generation") SubClassOf( ) SubClassOf( ) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +DisjointClasses( ObjectSomeValuesFrom( )) +DisjointClasses( ObjectSomeValuesFrom( )) +DisjointClasses( ObjectSomeValuesFrom( )) # Class: (germ cell development) @@ -109032,7 +108676,7 @@ SubClassOf( "skeletal muscle tissue development") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (neuromuscular junction development) @@ -109364,6 +109008,8 @@ AnnotationAssertion(rdfs:label "axo- EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectAllValuesFrom( )) # Class: (anterograde axonal transport) @@ -109600,13 +109246,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) -# Class: (sulfate transport) - -AnnotationAssertion(rdfs:label "sulfate transport") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - # Class: (regulation of G protein-coupled receptor signaling pathway) AnnotationAssertion(rdfs:label "regulation of G protein-coupled receptor signaling pathway") @@ -109915,8 +109554,9 @@ SubClassOf( ObjectSomeValuesFrom( "acetyl-CoA transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -110033,6 +109673,15 @@ SubClassOf( "S-adenosylmethionine-dependent methyltransferase activity") SubClassOf( ) +# Class: (aromatic-amino-acid transaminase activity) + +AnnotationAssertion(rdfs:label "aromatic-amino-acid transaminase activity") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (DNA-methyltransferase activity) AnnotationAssertion(rdfs:label "DNA-methyltransferase activity") @@ -110048,7 +109697,6 @@ AnnotationAssertion(rdfs:label "glyc EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (catabolic process) @@ -110168,7 +109816,6 @@ AnnotationAssertion(rdfs:label "arom EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (aromatic amino acid family biosynthetic process) @@ -110176,7 +109823,6 @@ AnnotationAssertion(rdfs:label "arom EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (aromatic amino acid family catabolic process) @@ -110184,7 +109830,6 @@ AnnotationAssertion(rdfs:label "arom EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (pyruvate family amino acid metabolic process) @@ -110215,7 +109860,6 @@ AnnotationAssertion(rdfs:label "bran EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (branched-chain amino acid biosynthetic process) @@ -110223,7 +109867,6 @@ AnnotationAssertion(rdfs:label "bran EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (branched-chain amino acid catabolic process) @@ -110232,7 +109875,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (glutamine family amino acid biosynthetic process) @@ -110310,18 +109952,6 @@ SubClassOf( ) SubClassOf( ) -# Class: (valine biosynthetic process) - -AnnotationAssertion(rdfs:label "valine biosynthetic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (glycoprotein metabolic process) AnnotationAssertion(rdfs:label "glycoprotein metabolic process") @@ -110336,7 +109966,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (vitamin biosynthetic process) @@ -110357,7 +109986,6 @@ SubClassOf( "nucleobase metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) # Class: (purine nucleobase biosynthetic process) @@ -110379,7 +110007,6 @@ SubClassOf( "nucleoside metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) # Class: (nucleotide metabolic process) @@ -110538,7 +110165,6 @@ AnnotationAssertion(rdfs:label "nucl EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ) # Class: (nucleoside catabolic process) @@ -110547,7 +110173,6 @@ AnnotationAssertion(rdfs:label "nucl EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ) # Class: (nucleotide biosynthetic process) @@ -110700,6 +110325,7 @@ SubClassOf( "nucleotide-sugar metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) SubClassOf( ) @@ -110708,8 +110334,8 @@ SubClassOf( "nucleotide-sugar biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) # Class: (nucleotide-sugar catabolic process) @@ -110718,6 +110344,7 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) SubClassOf( ) +SubClassOf( ) # Class: (thiamine biosynthetic process) @@ -110831,7 +110458,7 @@ SubClassOf( "amine metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) # Class: (amine biosynthetic process) @@ -110839,14 +110466,13 @@ AnnotationAssertion(rdfs:label "amin EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (amine catabolic process) AnnotationAssertion(rdfs:label "amine catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (oligosaccharide metabolic process) @@ -111022,31 +110648,6 @@ AnnotationAssertion(rdfs:label "plas SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (chloroplast stromal thylakoid) - -AnnotationAssertion(rdfs:label "chloroplast stromal thylakoid") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectAllValuesFrom( )) - -# Class: (chloroplast thylakoid) - -AnnotationAssertion(rdfs:label "chloroplast thylakoid") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (chloroplast thylakoid membrane) - -AnnotationAssertion(rdfs:label "chloroplast thylakoid membrane") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (plastid) AnnotationAssertion(rdfs:label "plastid") @@ -111087,15 +110688,6 @@ AnnotationAssertion(rdfs:label "chlo SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (thylakoid) - -AnnotationAssertion(rdfs:comment "A thylakoid is not considered an organelle, but some thylakoids are part of organelles.") -AnnotationAssertion(rdfs:label "thylakoid") -SubClassOf( ) -SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) -SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) -DisjointClasses( ObjectSomeValuesFrom( )) - # Class: (detection of external stimulus) AnnotationAssertion(rdfs:label "detection of external stimulus") @@ -111454,7 +111046,7 @@ SubClassOf( "alkaloid metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) # Class: (alkaloid biosynthetic process) @@ -111462,7 +111054,6 @@ AnnotationAssertion(rdfs:label "alka EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (alkaloid catabolic process) @@ -111470,7 +111061,6 @@ AnnotationAssertion(rdfs:label "alka EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (unidimensional cell growth) @@ -111845,13 +111435,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) -# Class: (thylakoid membrane organization) - -AnnotationAssertion(rdfs:comment "See also the cellular component term 'thylakoid membrane ; GO:0042651'.") -AnnotationAssertion(rdfs:label "thylakoid membrane organization") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) - # Class: (meiotic chromosome condensation) AnnotationAssertion(rdfs:label "meiotic chromosome condensation") @@ -111938,13 +111521,6 @@ AnnotationAssertion(rdfs:label "xyle EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -# Class: (regulation of photosynthesis) - -AnnotationAssertion(rdfs:label "regulation of photosynthesis") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (arginine catabolic process to proline via ornithine) AnnotationAssertion(rdfs:label "arginine catabolic process to proline via ornithine") @@ -112027,19 +111603,11 @@ SubClassOf( "response to proline") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) -# Class: (response to organonitrogen compound) - -AnnotationAssertion(rdfs:comment "Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.") -AnnotationAssertion(rdfs:label "response to organonitrogen compound") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - # Class: (endomembrane system organization) AnnotationAssertion(rdfs:label "endomembrane system organization") @@ -112050,10 +111618,10 @@ SubClassOf( "response to vitamin B1") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) +SubClassOf( ) # Class: (regulation of hydrogen peroxide metabolic process) @@ -112329,26 +111897,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (thylakoid membrane disassembly) - -AnnotationAssertion(rdfs:label "thylakoid membrane disassembly") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) -SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) -DisjointClasses( ObjectSomeValuesFrom( )) - -# Class: (regulation of thylakoid membrane disassembly) - -AnnotationAssertion(rdfs:label "regulation of thylakoid membrane disassembly") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) -SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) -SubClassOf( ObjectSomeValuesFrom( )) -DisjointClasses( ObjectSomeValuesFrom( )) - # Class: (regulation of membrane disassembly) AnnotationAssertion(rdfs:label "regulation of membrane disassembly") @@ -112477,7 +112025,7 @@ SubClassOf( "regulation of endothelial cell migration") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (positive regulation of endothelial cell migration) @@ -112485,7 +112033,7 @@ SubClassOf( ObjectSomeValuesFrom( "positive regulation of endothelial cell migration") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (negative regulation of endothelial cell migration) @@ -112493,7 +112041,7 @@ SubClassOf( ObjectSomeValuesFrom( "negative regulation of endothelial cell migration") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (positive regulation of macromolecule metabolic process) @@ -113182,8 +112730,8 @@ SubClassOf( ObjectSomeValuesFrom( "bradykinin catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (calcitonin catabolic process) @@ -113192,7 +112740,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (regulation of hormone levels) @@ -113231,24 +112778,24 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (regulation of glucose transmembrane transport) +# Class: (regulation of D-glucose transmembrane transport) -AnnotationAssertion(rdfs:label "regulation of glucose transmembrane transport") +AnnotationAssertion(rdfs:label "regulation of D-glucose transmembrane transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (positive regulation of glucose transmembrane transport) +# Class: (positive regulation of D-glucose transmembrane transport) -AnnotationAssertion(rdfs:label "positive regulation of glucose transmembrane transport") +AnnotationAssertion(rdfs:label "positive regulation of D-glucose transmembrane transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (negative regulation of glucose transmembrane transport) +# Class: (negative regulation of D-glucose transmembrane transport) -AnnotationAssertion(rdfs:label "negative regulation of glucose transmembrane transport") +AnnotationAssertion(rdfs:label "negative regulation of D-glucose transmembrane transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -114225,14 +113772,14 @@ SubClassOf( "response to purine-containing compound") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) # Class: (response to amine) AnnotationAssertion(rdfs:label "response to amine") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) # Class: (intercalated disc) @@ -114278,7 +113825,6 @@ SubClassOf( "regulation of extraocular skeletal muscle development") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -114287,7 +113833,6 @@ SubClassOf( ObjectSomeValuesFrom( "negative regulation of extraocular skeletal muscle development") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -114296,7 +113841,6 @@ SubClassOf( ObjectSomeValuesFrom( "positive regulation of extraocular skeletal muscle development") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -114682,7 +114226,7 @@ SubClassOf( "myotube cell development") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myotube cell development involved in skeletal muscle regeneration) @@ -115092,14 +114636,6 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (L-alanine transmembrane transporter activity) - -AnnotationAssertion(rdfs:label "L-alanine transmembrane transporter activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (gamma-aminobutyric acid transmembrane transporter activity) AnnotationAssertion(rdfs:label "gamma-aminobutyric acid transmembrane transporter activity") @@ -115178,6 +114714,15 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (L-tryptophan transmembrane transporter activity) + +AnnotationAssertion(rdfs:label "L-tryptophan transmembrane transporter activity") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (polyamine transmembrane transporter activity) AnnotationAssertion(rdfs:label "polyamine transmembrane transporter activity") @@ -115307,7 +114852,10 @@ SubClassOf( ObjectSomeValuesFrom( "coenzyme A transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (L-ascorbic acid transmembrane transporter activity) @@ -115875,6 +115423,7 @@ SubClassOf( ObjectSomeValuesFrom( "nucleotide-sugar transmembrane transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) @@ -115937,22 +115486,6 @@ SubClassOf( ) SubClassOf( ) -# Class: (L-alanine transport) - -AnnotationAssertion(rdfs:label "L-alanine transport") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - -# Class: (aspartate transmembrane transport) - -AnnotationAssertion(rdfs:label "aspartate transmembrane transport") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) - # Class: (gamma-aminobutyric acid transport) AnnotationAssertion(rdfs:comment "See also the biological process term 'neurotransmitter transport ; GO:0006836'.") @@ -116292,8 +115825,10 @@ SubClassOf( "coenzyme A transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) -SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) # Class: (creatine transmembrane transport) @@ -116400,9 +115935,9 @@ SubClassOf( "fatty-acyl-CoA transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ) # Class: (sterol transport) @@ -116435,27 +115970,29 @@ SubClassOf( ObjectSomeValuesFrom( "coenzyme A metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) # Class: (coenzyme A biosynthetic process) AnnotationAssertion(rdfs:label "coenzyme A biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) -SubClassOf( ) -SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) # Class: (coenzyme A catabolic process) AnnotationAssertion(rdfs:label "coenzyme A catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) -SubClassOf( ) -SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) # Class: (formate metabolic process) @@ -116496,17 +116033,6 @@ SubClassOf( "energy derivation by oxidation of reduced inorganic compounds") SubClassOf( ) -# Class: (photosynthesis) - -AnnotationAssertion(rdfs:label "photosynthesis") -SubClassOf( ) -SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) -SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) -SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) -SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) -DisjointClasses( ObjectSomeValuesFrom( )) -DisjointClasses( ObjectSomeValuesFrom( )) - # Class: (energy derivation by oxidation of organic compounds) AnnotationAssertion(rdfs:label "energy derivation by oxidation of organic compounds") @@ -116997,7 +116523,7 @@ SubClassOf( (lipase activity) AnnotationAssertion(rdfs:label "lipase activity") -SubClassOf( ) +SubClassOf( ) # Class: (kinase activity) @@ -117299,16 +116825,6 @@ SubClassOf( ObjectAllValuesFrom( "nuclear speck") SubClassOf( ) -# Class: (oxidoreductase activity, acting on CH-OH group of donors) - -AnnotationAssertion(rdfs:label "oxidoreductase activity, acting on CH-OH group of donors") -SubClassOf( ) - -# Class: (oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor) - -AnnotationAssertion(rdfs:label "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor") -SubClassOf( ) - # Class: (oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor) AnnotationAssertion(rdfs:label "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor") @@ -117401,11 +116917,6 @@ SubClassOf( "carboxyl- or carbamoyltransferase activity") SubClassOf( ) -# Class: (transketolase or transaldolase activity) - -AnnotationAssertion(rdfs:label "transketolase or transaldolase activity") -SubClassOf( ) - # Class: (acyltransferase activity) AnnotationAssertion(rdfs:label "acyltransferase activity") @@ -117620,6 +117131,15 @@ SubClassOf( "nuclear receptor binding") SubClassOf( ) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +DisjointClasses( ObjectSomeValuesFrom( )) +DisjointClasses( ObjectSomeValuesFrom( )) +DisjointClasses( ObjectSomeValuesFrom( )) # Class: (antibiotic metabolic process) @@ -117720,6 +117240,15 @@ SubClassOf( "stem cell division") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +DisjointClasses( ObjectSomeValuesFrom( )) +DisjointClasses( ObjectSomeValuesFrom( )) +DisjointClasses( ObjectSomeValuesFrom( )) # Class: (negative regulation of translation) @@ -118098,20 +117627,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) -# Class: (L-alanine biosynthetic process from pyruvate) - -AnnotationAssertion(rdfs:label "L-alanine biosynthetic process from pyruvate") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - -# Class: (L-alanine biosynthetic process via ornithine) - -AnnotationAssertion(rdfs:label "L-alanine biosynthetic process via ornithine") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - # Class: (tyrosine biosynthetic process, by oxidation of phenylalanine) AnnotationAssertion(rdfs:label "tyrosine biosynthetic process, by oxidation of phenylalanine") @@ -118205,8 +117720,10 @@ SubClassOf( "nicotinate nucleotide biosynthetic process from tryptophan") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) +SubClassOf( ) SubClassOf( ) +SubClassOf( ) # Class: (nicotinate nucleotide biosynthetic process) @@ -118252,9 +117769,9 @@ SubClassOf( ) SubClassOf( ) -# Class: (arachidonic acid metabolic process) +# Class: (arachidonate metabolic process) -AnnotationAssertion(rdfs:label "arachidonic acid metabolic process") +AnnotationAssertion(rdfs:label "arachidonate metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -118444,15 +117961,6 @@ SubClassOf( ) SubClassOf( ) -# Class: (glutamine catabolic process to fumarate) - -AnnotationAssertion(rdfs:label "glutamine catabolic process to fumarate") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (glycine catabolic process to creatine) AnnotationAssertion(rdfs:label "glycine catabolic process to creatine") @@ -118563,13 +118071,6 @@ SubClassOf( ) SubClassOf( ) -# Class: (beta-alanine catabolic process to L-alanine) - -AnnotationAssertion(rdfs:label "beta-alanine catabolic process to L-alanine") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - # Class: (arginine catabolic process to proline) AnnotationAssertion(rdfs:label "arginine catabolic process to proline") @@ -118621,14 +118122,12 @@ AnnotationAssertion(rdfs:label "taur EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (taurine metabolic process) AnnotationAssertion(rdfs:label "taurine metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) # Class: (oxalate transmembrane transporter activity) @@ -118650,7 +118149,6 @@ AnnotationAssertion(rdfs:label "prot EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (propionate metabolic process) @@ -118700,29 +118198,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) -# Class: (glutamate catabolic process to succinate via succinate semialdehyde) - -AnnotationAssertion(rdfs:comment "While mammals only have 2-oxoglutarate-dependent GABA-transaminase, both 2-oxoglutarate-dependent and pyruvate-dependent GABA-transaminase activities have been detected in plants.") -AnnotationAssertion(rdfs:label "glutamate catabolic process to succinate via succinate semialdehyde") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (glutamate catabolic process to aspartate) - -AnnotationAssertion(rdfs:label "glutamate catabolic process to aspartate") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - -# Class: (glutamate catabolic process to 2-oxoglutarate) - -AnnotationAssertion(rdfs:label "glutamate catabolic process to 2-oxoglutarate") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) - # Class: (glutamate catabolic process to oxaloacetate) AnnotationAssertion(rdfs:label "glutamate catabolic process to oxaloacetate") @@ -118810,7 +118285,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (urate catabolic process) @@ -118903,14 +118377,6 @@ AnnotationAssertion(rdfs:label "nitr EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -# Class: (anaerobic L-alanine catabolic process) - -AnnotationAssertion(rdfs:label "anaerobic L-alanine catabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) - # Class: (anaerobic glycine catabolic process) AnnotationAssertion(rdfs:label "anaerobic glycine catabolic process") @@ -119152,8 +118618,14 @@ SubClassOf( "growth factor binding") SubClassOf( ) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +DisjointClasses( ObjectSomeValuesFrom( )) +DisjointClasses( ObjectSomeValuesFrom( )) DisjointClasses( ObjectSomeValuesFrom( )) # Class: (isoprenoid binding) @@ -121162,7 +120634,7 @@ SubClassOf( ObjectSomeValuesFrom( "olfactory bulb interneuron differentiation") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (olfactory bulb interneuron fate commitment) @@ -121176,6 +120648,7 @@ SubClassOf( ObjectSomeValuesFrom( "olfactory bulb interneuron development") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -122139,7 +121612,6 @@ AnnotationAssertion(rdfs:label "sphi EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (sphingolipid catabolic process) @@ -122147,7 +121619,6 @@ AnnotationAssertion(rdfs:label "sphi EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (protein import into mitochondrial matrix) @@ -122186,7 +121657,6 @@ AnnotationAssertion(rdfs:label "prot EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (proteoglycan biosynthetic process) @@ -123035,14 +122505,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) -# Class: (D-alanine biosynthetic process) - -AnnotationAssertion(rdfs:label "D-alanine biosynthetic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) - # Class: (polyketide metabolic process) AnnotationAssertion(rdfs:label "polyketide metabolic process") @@ -123105,7 +122567,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (peptide antibiotic biosynthetic process) @@ -123115,7 +122576,6 @@ SubClassOf( ) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (peptide antibiotic catabolic process) @@ -123124,7 +122584,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (regulation of vitamin metabolic process) @@ -124367,8 +123826,8 @@ SubClassOf( ObjectSomeValuesFrom( "response to methotrexate") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (M band) @@ -124395,6 +123854,7 @@ SubClassOf( "nucleosome binding") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) # Class: (protein-containing complex localization) @@ -124888,13 +124348,6 @@ AnnotationAssertion(rdfs:label "memb SubClassOf( ) DisjointClasses( ) -# Class: (plastid thylakoid) - -AnnotationAssertion(rdfs:label "plastid thylakoid") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (nuclear lumen) AnnotationAssertion(rdfs:label "nuclear lumen") @@ -125151,7 +124604,7 @@ SubClassOf( ObjectSomeValuesFrom( (4-aminobutyrate transaminase complex) AnnotationAssertion(rdfs:label "4-aminobutyrate transaminase complex") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -126486,7 +125939,6 @@ AnnotationAssertion(rdfs:label "hepa EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (type I interferon production) @@ -126618,7 +126070,6 @@ AnnotationAssertion(rdfs:label "lymp EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (regulation of chemokine production) @@ -128028,15 +127479,15 @@ SubClassOf( ObjectSomeValuesFrom( "tetrapyrrole metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) # Class: (tetrapyrrole biosynthetic process) AnnotationAssertion(rdfs:label "tetrapyrrole biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (tetrapyrrole catabolic process) @@ -128044,7 +127495,6 @@ AnnotationAssertion(rdfs:label "tetr EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (sarcoplasmic reticulum membrane) @@ -128714,6 +128164,12 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) +# Class: (cerebrospinal fluid secretion) + +AnnotationAssertion(rdfs:label "cerebrospinal fluid secretion") +SubClassOf( ) +SubClassOf( ) + # Class: (Leydig cell differentiation) AnnotationAssertion(rdfs:label "Leydig cell differentiation") @@ -128891,7 +128347,6 @@ SubClassOf( (cellular response to stress) -AnnotationAssertion(rdfs:comment "Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.") AnnotationAssertion(rdfs:label "cellular response to stress") SubClassOf( ) SubClassOf( ) @@ -128941,9 +128396,9 @@ SubClassOf( "response to cobalamin") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (response to L-ascorbic acid) @@ -129046,9 +128501,10 @@ SubClassOf( (chloroplast proton-transporting ATP synthase complex assembly) AnnotationAssertion(rdfs:label "chloroplast proton-transporting ATP synthase complex assembly") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectAllValuesFrom( )) @@ -129057,17 +128513,18 @@ SubClassOf( ObjectAllValuesFrom( "mitochondrial proton-transporting ATP synthase complex assembly") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectAllValuesFrom( )) # Class: (plasma membrane proton-transporting ATP synthase complex assembly) AnnotationAssertion(rdfs:label "plasma membrane proton-transporting ATP synthase complex assembly") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (negative regulation of kinase activity) @@ -129160,37 +128617,6 @@ AnnotationAssertion(rdfs:label "resp EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -# Class: (nucleoside bisphosphate metabolic process) - -AnnotationAssertion(rdfs:label "nucleoside bisphosphate metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) - -# Class: (nucleoside bisphosphate biosynthetic process) - -AnnotationAssertion(rdfs:label "nucleoside bisphosphate biosynthetic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - -# Class: (nucleoside bisphosphate catabolic process) - -AnnotationAssertion(rdfs:label "nucleoside bisphosphate catabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - -# Class: (ribonucleoside bisphosphate metabolic process) - -AnnotationAssertion(rdfs:label "ribonucleoside bisphosphate metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) - -# Class: (hormone-sensitive lipase activity) - -AnnotationAssertion(rdfs:label "hormone-sensitive lipase activity") -SubClassOf( ) - # Class: (response to methanol) AnnotationAssertion(rdfs:label "response to methanol") @@ -129216,43 +128642,6 @@ AnnotationAssertion(rdfs:label "resp EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -# Class: (ribonucleoside bisphosphate biosynthetic process) - -AnnotationAssertion(rdfs:label "ribonucleoside bisphosphate biosynthetic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - -# Class: (ribonucleoside bisphosphate catabolic process) - -AnnotationAssertion(rdfs:label "ribonucleoside bisphosphate catabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - -# Class: (purine nucleoside bisphosphate metabolic process) - -AnnotationAssertion(rdfs:label "purine nucleoside bisphosphate metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - -# Class: (purine nucleoside bisphosphate biosynthetic process) - -AnnotationAssertion(rdfs:label "purine nucleoside bisphosphate biosynthetic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) - -# Class: (purine nucleoside bisphosphate catabolic process) - -AnnotationAssertion(rdfs:label "purine nucleoside bisphosphate catabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) - # Class: (protein localization to Golgi apparatus) AnnotationAssertion(rdfs:label "protein localization to Golgi apparatus") @@ -129576,7 +128965,6 @@ SubClassOf( ObjectSomeValuesFrom( "kynurenic acid metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) # Class: (kynurenic acid biosynthetic process) @@ -129584,7 +128972,6 @@ AnnotationAssertion(rdfs:label "kynu EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (response to monosaccharide) @@ -129687,19 +129074,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (photosynthetic membrane) - -AnnotationAssertion(rdfs:label "photosynthetic membrane") -SubClassOf( ) -SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) -SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) -SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) -SubClassOf( ObjectSomeValuesFrom( )) -DisjointClasses( ObjectSomeValuesFrom( )) -DisjointClasses( ObjectSomeValuesFrom( )) - # Class: (plasma lipoprotein particle) AnnotationAssertion(rdfs:label "plasma lipoprotein particle") @@ -129757,14 +129131,14 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (4-aminobutyrate:pyruvate transaminase activity) +# Class: (4-aminobutyrate:2-oxoglutarate transaminase activity) -AnnotationAssertion(rdfs:label "4-aminobutyrate:pyruvate transaminase activity") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion(rdfs:label "4-aminobutyrate:2-oxoglutarate transaminase activity") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (lipid droplet organization) @@ -129965,18 +129339,6 @@ SubClassOf( ) SubClassOf( ) -# Class: ('de novo' NAD biosynthetic process) - -AnnotationAssertion(rdfs:label "'de novo' NAD biosynthetic process") -SubClassOf( ) - -# Class: ('de novo' NAD biosynthetic process from aspartate) - -AnnotationAssertion(rdfs:label "'de novo' NAD biosynthetic process from aspartate") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - # Class: (retinol transmembrane transporter activity) AnnotationAssertion(rdfs:label "retinol transmembrane transporter activity") @@ -130020,7 +129382,6 @@ AnnotationAssertion(rdfs:label "phos EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (mitochondrion migration along actin filament) @@ -130079,9 +129440,9 @@ SubClassOf( ) SubClassOf( ) -# Class: (chemotaxis to arachidonic acid) +# Class: (chemotaxis to arachidonate) -AnnotationAssertion(rdfs:label "chemotaxis to arachidonic acid") +AnnotationAssertion(rdfs:label "chemotaxis to arachidonate") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -130148,6 +129509,7 @@ SubClassOf( ObjectSomeValuesFrom( "nucleosome organization") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) # Class: (iron ion transmembrane transport) @@ -130279,8 +129641,8 @@ SubClassOf( "response to histamine") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) # Class: (response to endoplasmic reticulum stress) @@ -130804,7 +130166,7 @@ AnnotationAssertion(rdfs:comment "No AnnotationAssertion(rdfs:label "acetyl-CoA transmembrane transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) # Class: (coenzyme A transmembrane transport) @@ -130812,7 +130174,7 @@ AnnotationAssertion(rdfs:comment "No AnnotationAssertion(rdfs:label "coenzyme A transmembrane transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) # Class: (heme transmembrane transport) @@ -132087,6 +131449,15 @@ SubClassOf( "glomerular endothelium fenestra") SubClassOf( ) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +DisjointClasses( ObjectSomeValuesFrom( )) +DisjointClasses( ObjectSomeValuesFrom( )) +DisjointClasses( ObjectSomeValuesFrom( )) # Class: (fucosylation) @@ -132146,11 +131517,10 @@ SubClassOf( "fatty-acyl-CoA catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ) +SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (long-chain fatty-acyl-CoA catabolic process) @@ -132287,8 +131657,8 @@ SubClassOf( "Note that this term is in the subset of terms that should not be used for direct manual annotation of gene products. It was created to be used for cross-referencing by other ontologies. Direct annotations to this term may be amended during annotation QC.") AnnotationAssertion(rdfs:label "response to gemcitabine") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (response to statin) @@ -132303,8 +131673,8 @@ SubClassOf( "Note that this term is in the subset of terms that should not be used for direct manual annotation of gene products. It was created to be used for cross-referencing by other ontologies. Direct annotations to this term may be amended during annotation QC.") AnnotationAssertion(rdfs:label "response to lapatinib") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (response to 5-fluorouracil) @@ -132329,8 +131699,8 @@ SubClassOf( "Note that this term is in the subset of terms that should not be used for direct manual annotation of gene products. It was created to be used for cross-referencing by other ontologies. Direct annotations to this term may be amended during annotation QC.") AnnotationAssertion(rdfs:label "response to ximelagatran") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (response to decreased oxygen levels) @@ -132442,8 +131812,8 @@ SubClassOf( "cellular response to L-cysteine") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (sodium ion export across plasma membrane) @@ -132559,9 +131929,9 @@ SubClassOf( "ER-associated protein degradation (ERAD) pathways target misfolded ER lumenal proteins (ERAD-L), ER membrane proteins (ERAD-M), and ER proteins with misfolded cytosolic domains (ERAD-C) by recognizing aberrant proteins, retrotranslocating these substrates to the cytosol, followed by substrate ubiquitination and proteosomal-mediated degradation. In contrast the stress-induced homeostatically regulated protein degradation (SHRED) pathway (GO:0120174), although inducible by stress, targets diverse ER membrane, and cytosolic proteins as well as numerous other native proteins in the absence of stress. Stress results in the protease-mediated (Nma111p) generation of a Roq1p cleavage product that then binds to the type-1 active site of Ubr1p, altering its substrate specificity, and leading to the proteasome-mediated degradation of both misfolded and native proteins. Although the SHRED pathway may contain some components in common with ERAD pathways (GO:0036503), such as UBR1, RAD6 and CDC48, other ERAD components, such as HRD1 and DOA10, do not appear to be involved, and as such these pathways are currently considered to be distinct.") AnnotationAssertion(rdfs:label "ERAD pathway") SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ) +SubClassOf( ) # Class: (Golgi membrane fusion) @@ -133023,7 +132393,7 @@ SubClassOf( "intracellular acyl-CoA homeostasis") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) # Class: (regulation of dopamine metabolic process) @@ -133274,7 +132644,6 @@ AnnotationAssertion(rdfs:label "lipo EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (lipoprotein catabolic process) @@ -133425,7 +132794,7 @@ SubClassOf( "cellular modified amino acid catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) # Class: (response to cocaine) @@ -133755,7 +133124,7 @@ SubClassOf( "cellular modified amino acid biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) # Class: (biogenic amine biosynthetic process) @@ -133788,7 +133157,6 @@ AnnotationAssertion(rdfs:label "taur EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectAllValuesFrom( )) @@ -133923,7 +133291,7 @@ SubClassOf( "indole-containing compound metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) # Class: (indole metabolic process) @@ -133949,8 +133317,8 @@ SubClassOf( "indole-containing compound biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (indole-containing compound catabolic process) @@ -133958,7 +133326,6 @@ AnnotationAssertion(rdfs:label "indo EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (melanin biosynthetic process) @@ -134037,8 +133404,9 @@ SubClassOf( "arginine biosynthetic process via ornithine") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) +SubClassOf( ) # Class: (purine nucleoside biosynthetic process) @@ -134257,7 +133625,6 @@ AnnotationAssertion(rdfs:label "hemo EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectAllValuesFrom( )) @@ -134283,7 +133650,7 @@ SubClassOf( "pteridine-containing compound metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) # Class: (pteridine-containing compound biosynthetic process) @@ -134291,7 +133658,6 @@ AnnotationAssertion(rdfs:label "pter EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (pteridine-containing compound catabolic process) @@ -134299,7 +133665,6 @@ AnnotationAssertion(rdfs:label "pter EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (hormone binding) @@ -134421,6 +133786,9 @@ SubClassOf( "cholesterol homeostasis") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +DisjointClasses( ObjectSomeValuesFrom( )) # Class: (hair cycle) @@ -134512,11 +133880,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (thylakoid membrane) - -AnnotationAssertion(rdfs:label "thylakoid membrane") -SubClassOf( ) - # Class: (regulation of cell fate specification) AnnotationAssertion(rdfs:label "regulation of cell fate specification") @@ -134884,29 +134247,6 @@ AnnotationAssertion(rdfs:label "plat SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (L-alanine metabolic process) - -AnnotationAssertion(rdfs:label "L-alanine metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - -# Class: (L-alanine biosynthetic process) - -AnnotationAssertion(rdfs:label "L-alanine biosynthetic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) - -# Class: (L-alanine catabolic process) - -AnnotationAssertion(rdfs:label "L-alanine catabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) - # Class: (pyruvate biosynthetic process) AnnotationAssertion(rdfs:label "pyruvate biosynthetic process") @@ -135040,15 +134380,6 @@ SubClassOf( ) SubClassOf( ) -# Class: (D-alanine transmembrane transport) - -AnnotationAssertion(rdfs:label "D-alanine transmembrane transport") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) - # Class: (D-serine transmembrane transport) AnnotationAssertion(rdfs:label "D-serine transmembrane transport") @@ -135066,14 +134397,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (D-alanine transmembrane transporter activity) - -AnnotationAssertion(rdfs:label "D-alanine transmembrane transporter activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (D-serine transmembrane transporter activity) AnnotationAssertion(rdfs:label "D-serine transmembrane transporter activity") @@ -135125,7 +134448,6 @@ AnnotationAssertion(rdfs:label "amyl EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (regulation of amyloid precursor protein biosynthetic process) @@ -135538,8 +134860,8 @@ SubClassOf( "response to L-leucine") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (lysosomal lumen) @@ -135770,7 +135092,7 @@ SubClassOf( "response to alkaloid") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) # Class: (chordate pharyngeal muscle development) @@ -136385,7 +135707,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (protein kinase B binding) @@ -136406,7 +135727,7 @@ SubClassOf( ObjectSomeValuesFrom( "response to peptide hormone") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (response to corticotropin-releasing hormone) @@ -136706,7 +136027,7 @@ SubClassOf( "endothelial cell migration") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) # Class: (regulation of kinase activity) @@ -136926,9 +136247,9 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity) +# Class: (glyceraldehyde-3-phosphate dehydrogenase [NAD(P)+] (phosphorylating) activity) -AnnotationAssertion(rdfs:label "glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity") +AnnotationAssertion(rdfs:label "glyceraldehyde-3-phosphate dehydrogenase [NAD(P)+] (phosphorylating) activity") SubClassOf( ) # Class: (regulation of biological process involved in symbiotic interaction) @@ -137694,6 +137015,15 @@ SubClassOf( "innate immune response") SubClassOf( ) SubClassOf( ) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +DisjointClasses( ObjectSomeValuesFrom( )) +DisjointClasses( ObjectSomeValuesFrom( )) +DisjointClasses( ObjectSomeValuesFrom( )) # Class: (regulation of innate immune response) @@ -137961,16 +137291,10 @@ SubClassOf( "proton-transporting ATP synthase complex") SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (plasma membrane proton-transporting ATP synthase complex) - -AnnotationAssertion(rdfs:label "plasma membrane proton-transporting ATP synthase complex") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - # Class: (cadherin binding) AnnotationAssertion(rdfs:label "cadherin binding") @@ -137984,14 +137308,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (chloroplast proton-transporting ATP synthase complex) - -AnnotationAssertion(rdfs:label "chloroplast proton-transporting ATP synthase complex") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (leukocyte activation) AnnotationAssertion(rdfs:label "leukocyte activation") @@ -140257,15 +139573,15 @@ SubClassOf( "nucleobase biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (nucleobase catabolic process) AnnotationAssertion(rdfs:label "nucleobase catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (deoxyribonucleoside biosynthetic process) @@ -140666,29 +139982,29 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (glucose import) +# Class: (D-glucose import) -AnnotationAssertion(rdfs:label "glucose import") +AnnotationAssertion(rdfs:label "D-glucose import") SubClassOf( ) -# Class: (regulation of glucose import) +# Class: (regulation of D-glucose import) -AnnotationAssertion(rdfs:label "regulation of glucose import") +AnnotationAssertion(rdfs:label "regulation of D-glucose import") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (negative regulation of glucose import) +# Class: (negative regulation of D-glucose import) -AnnotationAssertion(rdfs:label "negative regulation of glucose import") +AnnotationAssertion(rdfs:label "negative regulation of D-glucose import") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (positive regulation of glucose import) +# Class: (positive regulation of D-glucose import) -AnnotationAssertion(rdfs:label "positive regulation of glucose import") +AnnotationAssertion(rdfs:label "positive regulation of D-glucose import") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -140779,10 +140095,9 @@ SubClassOf( "acetyl-CoA catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) +SubClassOf( ) # Class: (butyrate biosynthetic process) @@ -140871,13 +140186,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) -# Class: (D-alanine metabolic process) - -AnnotationAssertion(rdfs:label "D-alanine metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - # Class: (D-amino acid biosynthetic process) AnnotationAssertion(rdfs:label "D-amino acid biosynthetic process") @@ -141007,7 +140315,6 @@ SubClassOf( "phosphatidylcholine metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) # Class: (glycerophospholipid biosynthetic process) @@ -141622,8 +140929,8 @@ SubClassOf( ObjectSomeValuesFrom( "response to carbamate") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (response to organophosphorus) @@ -143565,23 +142872,23 @@ SubClassOf( ObjectSomeValuesFrom( "regulation of skeletal muscle tissue development") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (negative regulation of skeletal muscle tissue development) AnnotationAssertion(rdfs:label "negative regulation of skeletal muscle tissue development") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (positive regulation of skeletal muscle tissue development) AnnotationAssertion(rdfs:label "positive regulation of skeletal muscle tissue development") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscle organ morphogenesis) @@ -144486,10 +143793,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (arachidonic acid secretion) +# Class: (arachidonate secretion) AnnotationAssertion(rdfs:comment "This term should be used to annotate release of arachidonic acid from the cell. For the hydrolytic release of arachidonic acid from a phospholipid, consider instead annotating to 'phospholipase A2 activity ; GO:0004623'.") -AnnotationAssertion(rdfs:label "arachidonic acid secretion") +AnnotationAssertion(rdfs:label "arachidonate secretion") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -144506,9 +143813,9 @@ AnnotationAssertion(rdfs:label "icos EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -# Class: (arachidonic acid binding) +# Class: (arachidonate binding) -AnnotationAssertion(rdfs:label "arachidonic acid binding") +AnnotationAssertion(rdfs:label "arachidonate binding") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -145076,10 +144383,11 @@ SubClassOf( ObjectSomeValuesFrom( "regulation of acyl-CoA biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (coagulation) @@ -145354,7 +144662,7 @@ SubClassOf( "nitrile metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) # Class: (nitrile catabolic process) @@ -145362,7 +144670,6 @@ AnnotationAssertion(rdfs:label "nitr EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (leukocyte migration) @@ -145403,7 +144710,6 @@ SubClassOf( ObjectSomeValuesFrom( "detection of light stimulus involved in visual perception") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -147180,9 +146486,9 @@ SubClassOf( "response to folic acid") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (response to methylglyoxal) @@ -148188,15 +147494,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) -# Class: (L-valine transaminase activity) - -AnnotationAssertion(rdfs:label "L-valine transaminase activity") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (carboxylic ester hydrolase activity) AnnotationAssertion(rdfs:label "carboxylic ester hydrolase activity") @@ -148206,7 +147503,7 @@ SubClassOf( "imidazole-containing compound metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) # Class: (imidazole-containing compound catabolic process) @@ -148214,7 +147511,6 @@ AnnotationAssertion(rdfs:label "imid EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (muscle cell development) @@ -148280,7 +147576,7 @@ SubClassOf( ObjectSomeValuesFrom( "cardiac muscle cell development") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -148369,18 +147665,10 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (plastid thylakoid membrane) - -AnnotationAssertion(rdfs:label "plastid thylakoid membrane") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (D-glucose transmembrane transporter activity) AnnotationAssertion(rdfs:label "D-glucose transmembrane transporter activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) # Class: (neuroblast division) @@ -148506,7 +147794,7 @@ SubClassOf( "response to lipoprotein particle") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) # Class: (adiponectin binding) @@ -148594,14 +147882,6 @@ AnnotationAssertion(rdfs:label "L-pr EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -# Class: (D-alanine catabolic process) - -AnnotationAssertion(rdfs:label "D-alanine catabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) - # Class: (reflex) AnnotationAssertion(rdfs:label "reflex") @@ -153777,7 +153057,7 @@ AnnotationAssertion(rdfs:label "cell EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ) @@ -153998,15 +153278,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (aspartate secretion) - -AnnotationAssertion(rdfs:label "aspartate secretion") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) - # Class: (epinephrine secretion, neurotransmission) AnnotationAssertion(rdfs:label "epinephrine secretion, neurotransmission") @@ -154015,13 +153286,6 @@ SubClassOf( ) SubClassOf( ) -# Class: (aspartate secretion, neurotransmission) - -AnnotationAssertion(rdfs:label "aspartate secretion, neurotransmission") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - # Class: (primary amine secretion) AnnotationAssertion(rdfs:label "primary amine secretion") @@ -154570,7 +153834,7 @@ SubClassOf( "response to (R)-carnitine") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) # Class: (replacement bone morphogenesis) @@ -154679,7 +153943,6 @@ AnnotationAssertion(rdfs:label "fatt EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ) # Class: (regulation of mitochondrial gene expression) @@ -154694,7 +153957,6 @@ SubClassOf( ObjectSomeValuesFrom( "fatty acid primary amide metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) # Class: (fatty acid primary amide catabolic process) @@ -154702,7 +153964,6 @@ SubClassOf( "fatty acid primary amide catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) # Class: (regulation of L-glutamine biosynthetic process) @@ -155645,13 +154906,6 @@ AnnotationAssertion(rdfs:label "trig EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -# Class: (aspartate binding) - -AnnotationAssertion(rdfs:label "aspartate binding") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - # Class: (fat cell proliferation) AnnotationAssertion(rdfs:label "fat cell proliferation") @@ -155916,22 +155170,6 @@ SubClassOf( "thyroid-stimulating hormone secretion") SubClassOf( ) -# Class: (respirasome) - -AnnotationAssertion(rdfs:label "respirasome") -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (plasma membrane respirasome) - -AnnotationAssertion(rdfs:label "plasma membrane respirasome") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectAllValuesFrom( )) - # Class: (response to oxygen levels) AnnotationAssertion(rdfs:label "response to oxygen levels") @@ -156011,11 +155249,6 @@ AnnotationAssertion(rdfs:label "resp EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -# Class: (L-tyrosine aminotransferase activity) - -AnnotationAssertion(rdfs:label "L-tyrosine aminotransferase activity") -SubClassOf( ) - # Class: (nicotinic acid receptor activity) AnnotationAssertion(rdfs:label "nicotinic acid receptor activity") @@ -156478,29 +155711,11 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (adenosine 3',5'-bisphosphate transmembrane transporter activity) - -AnnotationAssertion(rdfs:label "adenosine 3',5'-bisphosphate transmembrane transporter activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (response to interleukin-9) AnnotationAssertion(rdfs:label "response to interleukin-9") SubClassOf( ) -# Class: (adenosine 3',5'-bisphosphate transmembrane transport) - -AnnotationAssertion(rdfs:comment "Note that this term is not intended for use in annotating lateral movement within membranes.") -AnnotationAssertion(rdfs:label "adenosine 3',5'-bisphosphate transmembrane transport") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) - # Class: (superior temporal gyrus development) AnnotationAssertion(rdfs:label "superior temporal gyrus development") @@ -156589,7 +155804,7 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (cellular response to histidine) @@ -156598,8 +155813,8 @@ AnnotationAssertion(rdfs:label "cell EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (cellular response to L-leucine) @@ -156608,7 +155823,7 @@ AnnotationAssertion(rdfs:label "cell EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (cellular response to phenylalanine) @@ -156617,8 +155832,8 @@ AnnotationAssertion(rdfs:label "cell EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (cellular response to proline) @@ -156628,7 +155843,7 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (cellular response to ammonium ion) @@ -156738,7 +155953,7 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (cellular response to L-ascorbic acid) @@ -156765,8 +155980,8 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) # Class: (cellular response to vitamin D) @@ -156807,7 +156022,7 @@ SubClassOf( "cellular response to alkaloid") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) # Class: (cellular response to cocaine) @@ -156846,7 +156061,7 @@ AnnotationAssertion(rdfs:label "cell EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (cellular response to benzoic acid) @@ -156961,7 +156176,7 @@ AnnotationAssertion(rdfs:label "cell EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (cellular response to corticotropin-releasing hormone stimulus) @@ -157138,23 +156353,15 @@ AnnotationAssertion(rdfs:label "cell EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) -# Class: (cellular response to organonitrogen compound) - -AnnotationAssertion(rdfs:label "cellular response to organonitrogen compound") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) - # Class: (cellular response to amine stimulus) AnnotationAssertion(rdfs:label "cellular response to amine stimulus") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) # Class: (cellular response to histamine) @@ -157162,7 +156369,7 @@ AnnotationAssertion(rdfs:label "cell EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) # Class: (succinate transmembrane transport) @@ -157248,15 +156455,15 @@ SubClassOf( "response to heparin") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (cellular response to heparin) AnnotationAssertion(rdfs:label "cellular response to heparin") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (response to mycophenolic acid) @@ -157339,11 +156546,10 @@ SubClassOf( ObjectSomeValuesFrom( "acyl-CoA biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ) +SubClassOf( ) +SubClassOf( ) # Class: (granulocyte chemotaxis) @@ -157817,14 +157023,14 @@ SubClassOf( "response to monoamine") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) # Class: (cellular response to monoamine stimulus) AnnotationAssertion(rdfs:label "cellular response to monoamine stimulus") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) # Class: (response to catecholamine) @@ -159507,7 +158713,6 @@ AnnotationAssertion(rdfs:label "lact EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (lactam biosynthetic process) @@ -159515,14 +158720,13 @@ AnnotationAssertion(rdfs:label "lact EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (lactam catabolic process) AnnotationAssertion(rdfs:label "lactam catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (modified amino acid binding) @@ -159636,7 +158840,6 @@ SubClassOf( ObjectSomeValuesFrom( "purine-containing compound metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) # Class: (purine-containing compound biosynthetic process) @@ -159644,7 +158847,6 @@ AnnotationAssertion(rdfs:label "puri EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (purine-containing compound catabolic process) @@ -159652,14 +158854,12 @@ AnnotationAssertion(rdfs:label "puri EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (pyridine-containing compound metabolic process) AnnotationAssertion(rdfs:label "pyridine-containing compound metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) # Class: (pyridine-containing compound biosynthetic process) @@ -159667,7 +158867,6 @@ AnnotationAssertion(rdfs:label "pyri EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (pyridine-containing compound catabolic process) @@ -159675,14 +158874,12 @@ AnnotationAssertion(rdfs:label "pyri EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (pyrimidine-containing compound metabolic process) AnnotationAssertion(rdfs:label "pyrimidine-containing compound metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) # Class: (pyrimidine-containing compound biosynthetic process) @@ -159690,7 +158887,6 @@ AnnotationAssertion(rdfs:label "pyri EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (pyrimidine-containing compound catabolic process) @@ -159698,7 +158894,6 @@ AnnotationAssertion(rdfs:label "pyri EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (purine-containing compound transmembrane transport) @@ -159796,7 +158991,7 @@ SubClassOf( ObjectSomeValuesFrom( "endothelial cell apoptotic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) # Class: (oxygen metabolic process) @@ -160032,16 +159227,16 @@ SubClassOf( "cellular response to tacrolimus") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (cellular response to glutathione) AnnotationAssertion(rdfs:label "cellular response to glutathione") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (cellular response to camptothecin) @@ -160088,7 +159283,12 @@ SubClassOf( ObjectSomeValuesFrom( "regulation of coenzyme A biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (response to benzoic acid) @@ -160111,8 +159311,8 @@ SubClassOf( "response to indolebutyric acid") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (nitrile biosynthetic process) @@ -160121,7 +159321,6 @@ AnnotationAssertion(rdfs:label "nitr EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (response to nitrite) @@ -160142,18 +159341,18 @@ SubClassOf( ObjectSomeValuesFrom( "response to histidine") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (response to phenylalanine) AnnotationAssertion(rdfs:label "response to phenylalanine") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (regulation of primary metabolic process) @@ -160387,9 +159586,18 @@ SubClassOf( ObjectSomeValuesFrom( "cardiac muscle cell-cardiac muscle cell adhesion") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +DisjointClasses( ObjectSomeValuesFrom( )) +DisjointClasses( ObjectSomeValuesFrom( )) DisjointClasses( ObjectSomeValuesFrom( )) +DisjointClasses( ObjectSomeValuesFrom( )) # Class: (bundle of His cell action potential) @@ -161359,16 +160567,16 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (regulation of arachidonic acid secretion) +# Class: (regulation of arachidonate secretion) -AnnotationAssertion(rdfs:label "regulation of arachidonic acid secretion") +AnnotationAssertion(rdfs:label "regulation of arachidonate secretion") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (positive regulation of arachidonic acid secretion) +# Class: (positive regulation of arachidonate secretion) -AnnotationAssertion(rdfs:label "positive regulation of arachidonic acid secretion") +AnnotationAssertion(rdfs:label "positive regulation of arachidonate secretion") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -161901,14 +161109,6 @@ SubClassOf( ) SubClassOf( ) -# Class: (aspartate transmembrane import into vacuole) - -AnnotationAssertion(rdfs:label "aspartate transmembrane import into vacuole") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) - # Class: (glutamate transmembrane import into vacuole) AnnotationAssertion(rdfs:label "glutamate transmembrane import into vacuole") @@ -161928,12 +161128,6 @@ SubClassOf( ) SubClassOf( ) -# Class: (intracellular aspartate homeostasis) - -AnnotationAssertion(rdfs:label "intracellular aspartate homeostasis") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) - # Class: (intracellular threonine homeostasis) AnnotationAssertion(rdfs:label "intracellular threonine homeostasis") @@ -162643,9 +161837,10 @@ SubClassOf( (mitochondrial respirasome assembly) AnnotationAssertion(rdfs:label "mitochondrial respirasome assembly") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (oligodendrocyte apoptotic process) @@ -162730,61 +161925,61 @@ SubClassOf( "response to 5-fluoro-2'-deoxyuridine") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (response to cytarabine) AnnotationAssertion(rdfs:label "response to cytarabine") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (response to olanzapine) AnnotationAssertion(rdfs:label "response to olanzapine") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) # Class: (response to perphenazine) AnnotationAssertion(rdfs:label "response to perphenazine") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) +SubClassOf( ) # Class: (response to quetiapine) AnnotationAssertion(rdfs:label "response to quetiapine") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) # Class: (response to risperidone) AnnotationAssertion(rdfs:label "response to risperidone") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (response to ziprasidone) AnnotationAssertion(rdfs:label "response to ziprasidone") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) # Class: (response to clozapine) AnnotationAssertion(rdfs:label "response to clozapine") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) # Class: (protein localization to heterochromatin) @@ -162826,7 +162021,7 @@ SubClassOf( "hippocampal interneuron differentiation") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (Lewy body) @@ -162855,6 +162050,7 @@ SubClassOf( ObjectSomeValuesFrom( "hippocampal pyramidal neuron differentiation") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) # Class: (supramolecular fiber organization) @@ -163019,9 +162215,9 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (axonemal outer doublet) +# Class: (axonemal doublet microtubule) -AnnotationAssertion(rdfs:label "axonemal outer doublet") +AnnotationAssertion(rdfs:label "axonemal doublet microtubule") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -163624,9 +162820,9 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) -# Class: (glucose import across plasma membrane) +# Class: (D-glucose import across plasma membrane) -AnnotationAssertion(rdfs:label "glucose import across plasma membrane") +AnnotationAssertion(rdfs:label "D-glucose import across plasma membrane") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -163762,7 +162958,7 @@ SubClassOf( "cerebellar neuron development") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bone cell development) @@ -163929,9 +163125,7 @@ SubClassOf( (respiratory chain complex) AnnotationAssertion(rdfs:label "respiratory chain complex") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ) # Class: (non-motile cilium membrane) @@ -163940,13 +163134,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (chloroplast thylakoid membrane protein complex) - -AnnotationAssertion(rdfs:label "chloroplast thylakoid membrane protein complex") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (nuclear chromosome segregation) AnnotationAssertion(rdfs:label "nuclear chromosome segregation") @@ -165817,7 +165004,7 @@ AnnotationAssertion(rdfs:label "regu EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -165826,8 +165013,8 @@ SubClassOf( ObjectSomeValuesFrom( "negative regulation of UDP-N-acetylglucosamine biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -165837,8 +165024,8 @@ SubClassOf( ObjectSomeValuesFrom( "positive regulation of UDP-N-acetylglucosamine biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -166094,13 +165281,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (L-valine transmembrane import into vacuole) - -AnnotationAssertion(rdfs:label "L-valine transmembrane import into vacuole") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - # Class: (positive regulation of animal organ morphogenesis) AnnotationAssertion(rdfs:label "positive regulation of animal organ morphogenesis") @@ -166504,8 +165684,11 @@ SubClassOf( ObjectSomeValuesFrom( "coenzyme A binding") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) # Class: (succinyl-CoA binding) @@ -166517,9 +165700,10 @@ SubClassOf( "acyl-CoA binding") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) +SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (protein localization to motile cilium) @@ -166686,6 +165870,16 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (diacylglycerol lipase activity) + +AnnotationAssertion(rdfs:label "diacylglycerol lipase activity") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (meiotic nuclear division) AnnotationAssertion(rdfs:label "meiotic nuclear division") @@ -167127,7 +166321,7 @@ SubClassOf( ObjectSomeValuesFrom( (mitochondrial proton-transporting ATP synthase complex binding) AnnotationAssertion(rdfs:label "mitochondrial proton-transporting ATP synthase complex binding") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) # Class: (hexose import across plasma membrane) @@ -167203,13 +166397,6 @@ SubClassOf( "immune receptor activity") SubClassOf( ) -# Class: (L-alanine export across the plasma membrane) - -AnnotationAssertion(rdfs:label "L-alanine export across the plasma membrane") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - # Class: (heme import into cell) AnnotationAssertion(rdfs:label "heme import into cell") @@ -167650,14 +166837,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (negative regulation of protein-glutamine gamma-glutamyltransferase activity) - -AnnotationAssertion(rdfs:label "negative regulation of protein-glutamine gamma-glutamyltransferase activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (neuroinflammatory response) AnnotationAssertion(rdfs:label "neuroinflammatory response") @@ -167995,6 +167174,20 @@ AnnotationAssertion(rdfs:label "inte EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (autophagosome-dependent secretion) + +AnnotationAssertion(rdfs:label "autophagosome-dependent secretion") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) + +# Class: (stereocilium bundle organization) + +AnnotationAssertion(rdfs:label "stereocilium bundle organization") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + # Class: (L-amino acid metabolic process) AnnotationAssertion(rdfs:label "L-amino acid metabolic process") @@ -168036,7 +167229,6 @@ AnnotationAssertion(rdfs:label "prot EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (proteinogenic amino acid metabolic process) @@ -168044,7 +167236,6 @@ AnnotationAssertion(rdfs:label "prot EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (proteinogenic amino acid catabolic process) @@ -168052,7 +167243,6 @@ AnnotationAssertion(rdfs:label "prot EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (non-proteinogenic amino acid metabolic process) @@ -168060,7 +167250,6 @@ AnnotationAssertion(rdfs:label "non- EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (non-proteinogenic amino acid biosynthetic process) @@ -168068,7 +167257,6 @@ AnnotationAssertion(rdfs:label "non- EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (non-proteinogenic amino acid catabolic process) @@ -168076,7 +167264,6 @@ AnnotationAssertion(rdfs:label "non- EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (nuclease activator activity) @@ -168117,14 +167304,6 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (positive regulation of corticotropin-releasing hormone receptor activity) - -AnnotationAssertion(rdfs:label "positive regulation of corticotropin-releasing hormone receptor activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (regulation of cytokine production involved in inflammatory response) AnnotationAssertion(rdfs:label "regulation of cytokine production involved in inflammatory response") @@ -168211,19 +167390,19 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (regulation of sulfite transport) +# Class: (regulation of sulfite transmembrane transport) -AnnotationAssertion(rdfs:label "regulation of sulfite transport") +AnnotationAssertion(rdfs:label "regulation of sulfite transmembrane transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (positive regulation of sulfite transport) +# Class: (positive regulation of sulfite transmembrane transport) -AnnotationAssertion(rdfs:label "positive regulation of sulfite transport") +AnnotationAssertion(rdfs:label "positive regulation of sulfite transmembrane transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (regulation of neuromuscular synaptic transmission) @@ -168275,26 +167454,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (regulation of arginine biosynthetic process) - -AnnotationAssertion(rdfs:label "regulation of arginine biosynthetic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (positive regulation of arginine biosynthetic process) - -AnnotationAssertion(rdfs:label "positive regulation of arginine biosynthetic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (regulation of arginine catabolic process) AnnotationAssertion(rdfs:label "regulation of arginine catabolic process") @@ -168507,9 +167666,9 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (negative regulation of arachidonic acid secretion) +# Class: (negative regulation of arachidonate secretion) -AnnotationAssertion(rdfs:label "negative regulation of arachidonic acid secretion") +AnnotationAssertion(rdfs:label "negative regulation of arachidonate secretion") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -169823,9 +168982,18 @@ SubClassOf( "insulin metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +DisjointClasses( ObjectSomeValuesFrom( )) +DisjointClasses( ObjectSomeValuesFrom( )) DisjointClasses( ObjectSomeValuesFrom( )) +DisjointClasses( ObjectSomeValuesFrom( )) # Class: (insulin catabolic process) @@ -169875,21 +169043,21 @@ SubClassOf( "primary amino compound metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) # Class: (primary amino compound catabolic process) AnnotationAssertion(rdfs:label "primary amino compound catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (primary amino compound biosynthetic process) AnnotationAssertion(rdfs:label "primary amino compound biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (regulation of trophoblast cell migration) @@ -170169,10 +169337,9 @@ SubClassOf( "succinyl-CoA catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) +SubClassOf( ) # Class: (succinyl-CoA biosynthetic process) @@ -170246,8 +169413,8 @@ SubClassOf( ObjectSomeValuesFrom( "response to tacrolimus") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (regulation of odontoblast differentiation) @@ -170332,15 +169499,15 @@ SubClassOf( "response to L-cysteine") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (response to glutathione) AnnotationAssertion(rdfs:label "response to glutathione") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (regulation of leaf morphogenesis) @@ -170546,9 +169713,10 @@ SubClassOf( ObjectSomeValuesFrom( "regulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -170558,8 +169726,10 @@ AnnotationAssertion(rdfs:label "nega EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -170570,8 +169740,10 @@ AnnotationAssertion(rdfs:label "posi EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -171014,8 +170186,8 @@ SubClassOf( "response to candesartan") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (response to fenofibrate) @@ -171030,14 +170202,14 @@ SubClassOf( "response to metformin") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) # Class: (response to ribavirin) AnnotationAssertion(rdfs:label "response to ribavirin") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (response to camptothecin) @@ -171048,26 +170220,6 @@ SubClassOf( ) SubClassOf( ) -# Class: (organonitrogen compound metabolic process) - -AnnotationAssertion(rdfs:label "organonitrogen compound metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) - -# Class: (organonitrogen compound catabolic process) - -AnnotationAssertion(rdfs:label "organonitrogen compound catabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - -# Class: (organonitrogen compound biosynthetic process) - -AnnotationAssertion(rdfs:label "organonitrogen compound biosynthetic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - # Class: (fatty acid derivative binding) AnnotationAssertion(rdfs:label "fatty acid derivative binding") @@ -171147,7 +170299,6 @@ AnnotationAssertion(rdfs:label "alph EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (alpha-amino acid catabolic process) @@ -171155,7 +170306,6 @@ AnnotationAssertion(rdfs:label "alph EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ) # Class: (alpha-amino acid biosynthetic process) @@ -171164,7 +170314,6 @@ AnnotationAssertion(rdfs:label "alph EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ) # Class: (regulation of vesicle transport along microtubule) @@ -171442,14 +170591,12 @@ AnnotationAssertion(rdfs:label "glut EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (glutathione derivative catabolic process) AnnotationAssertion(rdfs:label "glutathione derivative catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) # Class: (glutathione derivative biosynthetic process) @@ -171457,7 +170604,6 @@ SubClassOf( "glutathione derivative biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) # Class: (proton binding) @@ -172307,8 +171453,8 @@ SubClassOf( "response to L-glutamate") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (response to salt) @@ -172324,14 +171470,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) -# Class: (D-valine catabolic process) - -AnnotationAssertion(rdfs:label "D-valine catabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) - # Class: (regulation of calcium ion import into sarcoplasmic reticulum) AnnotationAssertion(rdfs:label "regulation of calcium ion import into sarcoplasmic reticulum") @@ -172470,13 +171608,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) -# Class: (D-valine metabolic process) - -AnnotationAssertion(rdfs:label "D-valine metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - # Class: (regulation of organelle assembly) AnnotationAssertion(rdfs:label "regulation of organelle assembly") @@ -172967,7 +172098,7 @@ SubClassOf( "sulfate transmembrane transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (melanocyte apoptotic process) @@ -173030,16 +172161,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (negative regulation of water channel activity) - -AnnotationAssertion(rdfs:label "negative regulation of water channel activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (positive regulation of water channel activity) AnnotationAssertion(rdfs:label "positive regulation of water channel activity") @@ -173050,13 +172171,6 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (positive regulation of water channel activity involved in maintenance of lens transparency) - -AnnotationAssertion(rdfs:label "positive regulation of water channel activity involved in maintenance of lens transparency") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (sulfate import across plasma membrane) AnnotationAssertion(rdfs:label "sulfate import across plasma membrane") @@ -173250,7 +172364,7 @@ SubClassOf( ObjectSomeValuesFrom( "Note that this term is in the subset of terms that should not be used for direct manual annotation of gene products. It was created to be used for cross-referencing by other ontologies. Direct annotations to this term may be amended during annotation QC.") AnnotationAssertion(rdfs:label "response to cyclophosphamide") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) # Class: (response to doxorubicin) @@ -173301,14 +172415,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (negative regulation of catalase activity) - -AnnotationAssertion(rdfs:label "negative regulation of catalase activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (positive regulation of catalase activity) AnnotationAssertion(rdfs:label "positive regulation of catalase activity") @@ -173592,7 +172698,6 @@ SubClassOf( ObjectSomeValuesFrom( "Changes in the lineage choice of ABCs or their undifferentiated daughters might contribute to the mucous cell hyperplasia, metaplasia or squamous metaplasia seen in many respiratory disorders") AnnotationAssertion(rdfs:label "respiratory basal cell differentiation") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) # Class: (regulation of neuroblast proliferation) @@ -173731,22 +172836,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (negative regulation of choline O-acetyltransferase activity) - -AnnotationAssertion(rdfs:label "negative regulation of choline O-acetyltransferase activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (positive regulation of choline O-acetyltransferase activity) - -AnnotationAssertion(rdfs:label "positive regulation of choline O-acetyltransferase activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (late endosome to lysosome transport) AnnotationAssertion(rdfs:comment "an example of this is snapin in mouse (Q9Z266) in PMID:20920792 inferred from mutant phenotype") @@ -174259,18 +173348,6 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (negative regulation of voltage-gated chloride channel activity) - -AnnotationAssertion(rdfs:label "negative regulation of voltage-gated chloride channel activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (positive regulation of voltage-gated chloride channel activity) AnnotationAssertion(rdfs:label "positive regulation of voltage-gated chloride channel activity") @@ -174508,15 +173585,6 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (negative regulation of acetylcholine-gated cation channel activity) - -AnnotationAssertion(rdfs:label "negative regulation of acetylcholine-gated cation channel activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (regulation of proteolysis involved in protein catabolic process) AnnotationAssertion(rdfs:comment "overexpression of cathepsin C propeptide significantly increased the degradation of intestinal alkaline phosphatase (IAP)") @@ -174716,7 +173784,6 @@ SubClassOf( ObjectSomeValuesFrom( "regulation of autophagy of mitochondrion") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (negative regulation of autophagy of mitochondrion) @@ -174724,7 +173791,6 @@ SubClassOf( ObjectSomeValuesFrom( "negative regulation of autophagy of mitochondrion") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -174790,14 +173856,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (negative regulation of tyrosine 3-monooxygenase activity) - -AnnotationAssertion(rdfs:label "negative regulation of tyrosine 3-monooxygenase activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (positive regulation of tyrosine 3-monooxygenase activity) AnnotationAssertion(rdfs:label "positive regulation of tyrosine 3-monooxygenase activity") @@ -175102,14 +174160,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (negative regulation of glutathione peroxidase activity) - -AnnotationAssertion(rdfs:label "negative regulation of glutathione peroxidase activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (positive regulation of glutathione peroxidase activity) AnnotationAssertion(rdfs:label "positive regulation of glutathione peroxidase activity") @@ -175231,24 +174281,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (negative regulation of pyruvate kinase activity) - -AnnotationAssertion(rdfs:label "negative regulation of pyruvate kinase activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (positive regulation of pyruvate kinase activity) - -AnnotationAssertion(rdfs:label "positive regulation of pyruvate kinase activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (regulation of regulated secretory pathway) AnnotationAssertion(rdfs:comment "An example of this is protein domain-specific expression of Synaptotagmin 1 in rat (P21707) in PMID:12526776 inferred from mutant phenotype.") @@ -175610,8 +174642,8 @@ SubClassOf( "response to clopidogrel") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (regulation of mitotic spindle checkpoint) @@ -176039,7 +175071,6 @@ AnnotationAssertion(rdfs:comment "An AnnotationAssertion(rdfs:label "positive regulation of autophagy of mitochondrion") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -176428,14 +175459,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (L-valine transmembrane transport) - -AnnotationAssertion(rdfs:label "L-valine transmembrane transport") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) - # Class: (regulation of glutathione biosynthetic process) AnnotationAssertion(rdfs:label "regulation of glutathione biosynthetic process") @@ -176551,13 +175574,6 @@ SubClassOf( ) SubClassOf( ) -# Class: (L-valine import across plasma membrane) - -AnnotationAssertion(rdfs:label "L-valine import across plasma membrane") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - # Class: (L-tyrosine import across plasma membrane) AnnotationAssertion(rdfs:label "L-tyrosine import across plasma membrane") @@ -177006,9 +176022,18 @@ SubClassOf( ObjectSomeValuesFrom( "epithelial cell apoptotic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +DisjointClasses( ObjectSomeValuesFrom( )) +DisjointClasses( ObjectSomeValuesFrom( )) DisjointClasses( ObjectSomeValuesFrom( )) +DisjointClasses( ObjectSomeValuesFrom( )) # Class: (regulation of collagen fibril organization) @@ -177778,16 +176803,6 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (positive regulation of iron ion transmembrane transporter activity) - -AnnotationAssertion(rdfs:label "positive regulation of iron ion transmembrane transporter activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (regulation of Schwann cell chemotaxis) AnnotationAssertion(rdfs:label "regulation of Schwann cell chemotaxis") @@ -177828,12 +176843,12 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) -# Class: (L-alanine import across plasma membrane) +# Class: (L-tryptophan import across plasma membrane) -AnnotationAssertion(rdfs:label "L-alanine import across plasma membrane") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) +AnnotationAssertion(rdfs:label "L-tryptophan import across plasma membrane") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) # Class: (regulation of ERAD pathway) @@ -178134,13 +177149,13 @@ SubClassOf( ObjectSomeValuesFrom( "response to L-phenylalanine derivative") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) # Class: (cellular response to L-phenylalanine derivative) AnnotationAssertion(rdfs:label "cellular response to L-phenylalanine derivative") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (rod bipolar cell differentiation) @@ -178159,13 +177174,13 @@ SubClassOf( "response to ciliary neurotrophic factor") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) # Class: (cellular response to ciliary neurotrophic factor) AnnotationAssertion(rdfs:label "cellular response to ciliary neurotrophic factor") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (regulation of neuromuscular junction development) @@ -178318,35 +177333,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) -# Class: (regulation of aspartate secretion) - -AnnotationAssertion(rdfs:label "regulation of aspartate secretion") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (negative regulation of aspartate secretion) - -AnnotationAssertion(rdfs:label "negative regulation of aspartate secretion") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (positive regulation of aspartate secretion) - -AnnotationAssertion(rdfs:label "positive regulation of aspartate secretion") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (negative regulation of neuronal action potential) AnnotationAssertion(rdfs:label "negative regulation of neuronal action potential") @@ -178496,37 +177482,37 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (response to arachidonic acid) +# Class: (response to arachidonate) -AnnotationAssertion(rdfs:label "response to arachidonic acid") +AnnotationAssertion(rdfs:label "response to arachidonate") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -# Class: (cellular response to arachidonic acid) +# Class: (cellular response to arachidonate) -AnnotationAssertion(rdfs:label "cellular response to arachidonic acid") +AnnotationAssertion(rdfs:label "cellular response to arachidonate") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -# Class: (regulation of chemotaxis to arachidonic acid) +# Class: (regulation of chemotaxis to arachidonate) -AnnotationAssertion(rdfs:label "regulation of chemotaxis to arachidonic acid") +AnnotationAssertion(rdfs:label "regulation of chemotaxis to arachidonate") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (negative regulation of chemotaxis to arachidonic acid) +# Class: (negative regulation of chemotaxis to arachidonate) -AnnotationAssertion(rdfs:label "negative regulation of chemotaxis to arachidonic acid") +AnnotationAssertion(rdfs:label "negative regulation of chemotaxis to arachidonate") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (positive regulation of chemotaxis to arachidonic acid) +# Class: (positive regulation of chemotaxis to arachidonate) -AnnotationAssertion(rdfs:label "positive regulation of chemotaxis to arachidonic acid") +AnnotationAssertion(rdfs:label "positive regulation of chemotaxis to arachidonate") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -178541,12 +177527,12 @@ SubClassOf( ) SubClassOf( ) -# Class: (L-alanine transmembrane transport) +# Class: (L-tryptophan transmembrane transport) -AnnotationAssertion(rdfs:label "L-alanine transmembrane transport") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) +AnnotationAssertion(rdfs:label "L-tryptophan transmembrane transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) # Class: (negative regulation of mRNA binding) @@ -178560,27 +177546,27 @@ SubClassOf( ObjectSomeValuesFrom( "response to polyamine macromolecule") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) # Class: (cellular response to polyamine macromolecule) AnnotationAssertion(rdfs:label "cellular response to polyamine macromolecule") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (response to glycoprotein) AnnotationAssertion(rdfs:label "response to glycoprotein") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (cellular response to glycoprotein) AnnotationAssertion(rdfs:label "cellular response to glycoprotein") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ) @@ -178694,8 +177680,8 @@ SubClassOf( ObjectSomeValuesFrom( "response to methionine") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (regulation of fat cell apoptotic process) @@ -178771,9 +177757,9 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (glucose transmembrane transport) +# Class: (D-glucose transmembrane transport) -AnnotationAssertion(rdfs:label "glucose transmembrane transport") +AnnotationAssertion(rdfs:label "D-glucose transmembrane transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -179346,8 +178332,8 @@ SubClassOf( ObjectSomeValuesFrom( "response to L-glutamine") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (cellular response to L-glutamine) @@ -179355,7 +178341,7 @@ SubClassOf( "cellular response to L-glutamine") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ) @@ -179628,6 +178614,7 @@ SubClassOf( "midbrain dopaminergic neuron differentiation") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -179724,14 +178711,14 @@ DisjointClasses( ObjectSomeValuesFrom AnnotationAssertion(rdfs:label "response to bleomycin") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (cellular response to bleomycin) AnnotationAssertion(rdfs:label "cellular response to bleomycin") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ) @@ -180127,10 +179114,10 @@ SubClassOf( ObjectSomeValuesFrom( "Note that this term is in the subset of terms that should not be used for direct manual annotation of gene products. It was created to be used for cross-referencing by other ontologies. Direct annotations to this term may be amended during annotation QC.") AnnotationAssertion(rdfs:label "response to haloperidol") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ) +SubClassOf( ) # Class: (cellular response to haloperidol) @@ -180138,9 +179125,9 @@ AnnotationAssertion(rdfs:comment "No AnnotationAssertion(rdfs:label "cellular response to haloperidol") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (regulation of axo-dendritic protein transport) @@ -180326,22 +179313,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (negative regulation of photosynthesis) - -AnnotationAssertion(rdfs:label "negative regulation of photosynthesis") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (positive regulation of photosynthesis) - -AnnotationAssertion(rdfs:label "positive regulation of photosynthesis") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (regulation of lysosomal protein catabolic process) AnnotationAssertion(rdfs:label "regulation of lysosomal protein catabolic process") @@ -180532,7 +179503,7 @@ SubClassOf( "cellular response to L-glutamate") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ) @@ -180540,14 +179511,14 @@ SubClassOf( "response to cyclosporin A") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (cellular response to cyclosporin A) AnnotationAssertion(rdfs:label "cellular response to cyclosporin A") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ) @@ -180555,9 +179526,9 @@ SubClassOf( "response to 3,3',5-triiodo-L-thyronine") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (cellular response to 3,3',5-triiodo-L-thyronine) @@ -180566,7 +179537,7 @@ AnnotationAssertion(rdfs:label "cell EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ) @@ -180604,15 +179575,6 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (negative regulation of proton-transporting ATP synthase activity, rotational mechanism) - -AnnotationAssertion(rdfs:label "negative regulation of proton-transporting ATP synthase activity, rotational mechanism") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (positive regulation of proton-transporting ATP synthase activity, rotational mechanism) AnnotationAssertion(rdfs:label "positive regulation of proton-transporting ATP synthase activity, rotational mechanism") @@ -181013,8 +179975,8 @@ SubClassOf( "response to homocysteine") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (cellular response to homocysteine) @@ -181022,7 +179984,7 @@ SubClassOf( "cellular response to homocysteine") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ) @@ -181175,14 +180137,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (positive regulation of creatine transmembrane transporter activity) - -AnnotationAssertion(rdfs:label "positive regulation of creatine transmembrane transporter activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (regulation of dense core granule exocytosis) AnnotationAssertion(rdfs:label "regulation of dense core granule exocytosis") @@ -181246,8 +180200,8 @@ SubClassOf( ObjectSomeValuesFrom( "response to glycine") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (cellular response to glycine) @@ -181255,7 +180209,7 @@ SubClassOf( "cellular response to glycine") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ) @@ -182409,9 +181363,9 @@ SubClassOf( ObjectSomeValuesFrom( "response to pyrimidine ribonucleotide") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (cellular response to pyrimidine ribonucleotide) @@ -182419,7 +181373,7 @@ SubClassOf( "cellular response to pyrimidine ribonucleotide") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ) @@ -182932,8 +181886,8 @@ SubClassOf( "Note that this term is in the subset of terms that should not be used for direct manual annotation of gene products. It was created to be used for cross-referencing by other ontologies. Direct annotations to this term may be amended during annotation QC.") AnnotationAssertion(rdfs:label "response to temozolomide") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (2-phenylethylamine receptor activity) @@ -183253,12 +182207,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) -# Class: (acetolactate synthase regulator activity) - -AnnotationAssertion(rdfs:label "acetolactate synthase regulator activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) - # Class: (regulation of cytoplasmic translational initiation in response to stress) AnnotationAssertion(rdfs:label "regulation of cytoplasmic translational initiation in response to stress") @@ -183557,8 +182505,10 @@ SubClassOf( ObjectSomeValuesFrom( "regulation of arginine biosynthetic process via ornithine") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (regulation of male gonad development) @@ -184777,14 +183727,14 @@ SubClassOf( ObjectSomeValuesFrom( "regulation of endothelial cell apoptotic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (negative regulation of endothelial cell apoptotic process) AnnotationAssertion(rdfs:label "negative regulation of endothelial cell apoptotic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -184792,7 +183742,7 @@ SubClassOf( ObjectSomeValuesFrom( "positive regulation of endothelial cell apoptotic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -194714,6 +193664,13 @@ EquivalentClasses( ObjectSomeValuesFr SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( )))) +# Class: (4-Hydroxyphenylpyruvic aciduria) + +AnnotationAssertion(rdfs:label "4-Hydroxyphenylpyruvic aciduria") +EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( )))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( )))) + # Class: (Elevated urinary delta-aminolevulinic acid) AnnotationAssertion(rdfs:comment "Delta-aminolevulinic acid synthesis is a rate-controlling step in heme synthesis.") @@ -202674,13 +201631,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) -# Class: (Decreased activity of mitochondrial respiratory chain) - -AnnotationAssertion(rdfs:label "Decreased activity of mitochondrial respiratory chain") -EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) - # Class: (Calf muscle hypertrophy) AnnotationAssertion(rdfs:comment "Distal lower limb hypertrophy") @@ -212436,20 +211386,6 @@ EquivalentClasses( ObjectSomeValuesFr SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) -# Class: (Abnormal activity of mitochondrial respiratory chain) - -AnnotationAssertion(rdfs:label "Abnormal activity of mitochondrial respiratory chain") -EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( )))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( )))) - -# Class: (Decreased activity of mitochondrial ATP synthase complex) - -AnnotationAssertion(rdfs:label "Decreased activity of mitochondrial ATP synthase complex") -EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) - # Class: (Short digit) AnnotationAssertion(rdfs:comment "Note that the term brachydactyly is reserved for specific patterns of short digits, see HP:0001156.") @@ -217290,14 +216226,6 @@ AnnotationAssertion( "Neuroinflammation") SubClassOf( ) -# Class: (Abnormal circulating keto acid concentration) - -AnnotationAssertion( "A deviation from the normal concentration of a keto acid in the blood circulation. Keto acids or ketoacids are organic compounds that contain a carboxylic acid group and a ketone group.") -AnnotationAssertion(rdfs:label "Abnormal circulating keto acid concentration") -EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( )))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( )))) - # Class: (Abnormal circulating bilirubin concentration) AnnotationAssertion(rdfs:label "Abnormal circulating bilirubin concentration") @@ -217804,13 +216732,6 @@ EquivalentClasses( ObjectSomeValuesFr SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) -# Class: (Increased activity of mitochondrial respiratory chain) - -AnnotationAssertion(rdfs:label "Increased activity of mitochondrial respiratory chain") -EquivalentClasses( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )))) - # Class: (Protruding coccyx) AnnotationAssertion(rdfs:label "Protruding coccyx") @@ -224492,11 +223413,6 @@ EquivalentClasses( ObjectIntersect SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (combined oxidative phosphorylation deficiency) - -AnnotationAssertion(rdfs:label "combined oxidative phosphorylation deficiency") -SubClassOf( ) - # Class: (uvulitis) AnnotationAssertion(rdfs:label "uvulitis") @@ -233977,14 +232893,6 @@ SubClassOf( ) SubClassOf( ) -# Class: (mitochondrial proton-transporting ATP synthase complex deficiency) - -AnnotationAssertion(rdfs:comment "Consider splitting out nuclear type for OMIMPS") -AnnotationAssertion(rdfs:label "mitochondrial proton-transporting ATP synthase complex deficiency") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (gastric neuroendocrine tumor, well differentiated, low or intermediate grade) AnnotationAssertion(rdfs:label "gastric neuroendocrine tumor, well differentiated, low or intermediate grade") @@ -238267,7 +237175,6 @@ SubClassOf( (ovarian granulosa cell tumor) AnnotationAssertion(rdfs:label "ovarian granulosa cell tumor") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -242991,6 +241898,11 @@ SubClassOf( "Schizosaccharomyces pombe") SubClassOf( ) +# Class: (Schizosaccharomyces octosporus) + +AnnotationAssertion(rdfs:label "Schizosaccharomyces octosporus") +SubClassOf( ) + # Class: (Saccharomyces) AnnotationAssertion(rdfs:label "Saccharomyces") @@ -244562,6 +243474,11 @@ SubClassOf( "mononucleate") SubClassOf( ) +# Class: (ciliated) + +AnnotationAssertion(rdfs:label "ciliated") +SubClassOf( ) + # Class: (striated) AnnotationAssertion(rdfs:label "striated") @@ -245990,6 +244907,11 @@ AnnotationAssertion(rdfs:comment " AnnotationAssertion(rdfs:label "cell morphology") SubClassOf( ) +# Class: (multiciliated) + +AnnotationAssertion(rdfs:label "multiciliated") +SubClassOf( ) + # Class: (absence due to degeneration) AnnotationAssertion(rdfs:label "absence due to degeneration") diff --git a/src/patterns/data/default/response_to_chemical_stimulus_trait.tsv b/src/patterns/data/default/response_to_chemical_stimulus_trait.tsv index 81071fad..202d17fa 100644 --- a/src/patterns/data/default/response_to_chemical_stimulus_trait.tsv +++ b/src/patterns/data/default/response_to_chemical_stimulus_trait.tsv @@ -119,3 +119,4 @@ OBA:2045298 CHEBI:145810 insulin https://orcid.org/0000-0001-8314-2140 OBA:2045299 CHEBI:17234 glucose https://orcid.org/0000-0001-8314-2140 OBA:2050420 CHEBI:76172 loxoprofen https://orcid.org/0000-0001-6757-4744 OBA:2050421 CHEBI:3732 clarithromycin https://orcid.org/0000-0001-6757-4744 +OBA:2051963 CHEBI:42797 gabapentin https://orcid.org/0000-0001-6757-4744 diff --git a/src/patterns/definitions.owl b/src/patterns/definitions.owl index d1c59a4c..4e0e9a1a 100644 --- a/src/patterns/definitions.owl +++ b/src/patterns/definitions.owl @@ -7,8 +7,8 @@ Prefix(rdfs:=) Ontology( - -Annotation(owl:versionInfo "2024-09-12") + +Annotation(owl:versionInfo "2024-10-17") Declaration(Class()) Declaration(Class()) @@ -309,6 +309,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -942,6 +943,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -952,8 +954,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1243,7 +1243,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1337,6 +1336,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1467,7 +1467,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1520,9 +1519,11 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -14193,6 +14194,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -31781,12 +31783,12 @@ AnnotationAssertion(Annotation( "pelvic complex muscle size") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -# Class: (mitochondrial respirasome rate) +# Class: (respiratory chain complex rate) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "The rate of a mitochondrial respirasome.") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "rate of mitochondrial respirasome") -AnnotationAssertion(rdfs:label "mitochondrial respirasome rate") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "The rate of a respiratory chain complex.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "rate of respiratory chain complex") +AnnotationAssertion(rdfs:label "respiratory chain complex rate") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) # Class: (muscle of neck size) @@ -34616,12 +34618,12 @@ AnnotationAssertion(Annotation( "pedal digit 5 length") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -# Class: (mitochondrial proton-transporting ATP synthase complex rate) +# Class: (proton-transporting ATP synthase complex rate) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "The rate of a mitochondrial proton-transporting ATP synthase complex.") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "rate of mitochondrial proton-transporting ATP synthase complex") -AnnotationAssertion(rdfs:label "mitochondrial proton-transporting ATP synthase complex rate") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "The rate of a proton-transporting ATP synthase complex.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "rate of proton-transporting ATP synthase complex") +AnnotationAssertion(rdfs:label "proton-transporting ATP synthase complex rate") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) # Class: (pedal digit 1 displaced) @@ -38816,18 +38818,18 @@ AnnotationAssertion(Annotation( "diaphragm position") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -# Class: (glucose import rate) +# Class: (D-glucose import rate) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "The rate of a glucose import.") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "rate of glucose import") -AnnotationAssertion(rdfs:label "glucose import rate") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "The rate of a D-glucose import.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "rate of D-glucose import") +AnnotationAssertion(rdfs:label "D-glucose import rate") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -# Class: (glucose import amount) +# Class: (D-glucose import amount) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "The amount of a glucose import.") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "amount of glucose import") -AnnotationAssertion(rdfs:label "glucose import amount") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "The amount of a D-glucose import.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "amount of D-glucose import") +AnnotationAssertion(rdfs:label "D-glucose import amount") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) # Class: (heart contraction variability) @@ -49869,11 +49871,11 @@ AnnotationAssertion(Annotation( "lipoprotein lipase activity rate") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -# Class: (triglyceride lipase activity rate) +# Class: (triacylglycerol lipase activity rate) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "The rate of a triglyceride lipase activity.") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "rate of triglyceride lipase activity") -AnnotationAssertion(rdfs:label "triglyceride lipase activity rate") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "The rate of a triacylglycerol lipase activity.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "rate of triacylglycerol lipase activity") +AnnotationAssertion(rdfs:label "triacylglycerol lipase activity rate") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) # Class: (alkaline phosphatase activity rate) @@ -53544,12 +53546,12 @@ AnnotationAssertion(Annotation( "cholinesterase activity rate") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -# Class: (L-tyrosine aminotransferase activity rate) +# Class: (L-tyrosine-2-oxoglutarate transaminase activity rate) -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "The rate of a L-tyrosine aminotransferase activity.") -AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "rate of L-tyrosine aminotransferase activity") -AnnotationAssertion(rdfs:label "L-tyrosine aminotransferase activity rate") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "The rate of a L-tyrosine-2-oxoglutarate transaminase activity.") +AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "rate of L-tyrosine-2-oxoglutarate transaminase activity") +AnnotationAssertion(rdfs:label "L-tyrosine-2-oxoglutarate transaminase activity rate") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) # Class: (procollagen-proline 4-dioxygenase activity rate) @@ -55203,12 +55205,12 @@ AnnotationAssertion(Annotation( "facial vein quality") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -# Class: (mitochondrial respirasome quality) +# Class: (respiratory chain complex quality) -AnnotationAssertion(Annotation( "obo:oba/patterns/entity_attribute_part_of") "The quality of a mitochondrial respirasome.") -AnnotationAssertion(Annotation( "obo:oba/patterns/entity_attribute_part_of") "quality of mitochondrial respirasome") -AnnotationAssertion(rdfs:label "mitochondrial respirasome quality") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +AnnotationAssertion(Annotation( "obo:oba/patterns/entity_attribute_part_of") "The quality of a respiratory chain complex.") +AnnotationAssertion(Annotation( "obo:oba/patterns/entity_attribute_part_of") "quality of respiratory chain complex") +AnnotationAssertion(rdfs:label "respiratory chain complex quality") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) # Class: (cartilage of external ear quality) @@ -58537,12 +58539,12 @@ AnnotationAssertion(Annotation( "cocaine consumption quality") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -# Class: (hormone-sensitive lipase activity quality) +# Class: (diacylglycerol lipase activity quality) -AnnotationAssertion(Annotation( "obo:oba/patterns/entity_attribute_part_of") "The quality of a hormone-sensitive lipase activity.") -AnnotationAssertion(Annotation( "obo:oba/patterns/entity_attribute_part_of") "quality of hormone-sensitive lipase activity") -AnnotationAssertion(rdfs:label "hormone-sensitive lipase activity quality") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +AnnotationAssertion(Annotation( "obo:oba/patterns/entity_attribute_part_of") "The quality of a diacylglycerol lipase activity.") +AnnotationAssertion(Annotation( "obo:oba/patterns/entity_attribute_part_of") "quality of diacylglycerol lipase activity") +AnnotationAssertion(rdfs:label "diacylglycerol lipase activity quality") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) # Class: (head bobbing quality) @@ -59679,12 +59681,12 @@ AnnotationAssertion(Annotation( "avoidance learning behavior quality") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -# Class: (L-tyrosine aminotransferase activity quality) +# Class: (L-tyrosine-2-oxoglutarate transaminase activity quality) -AnnotationAssertion(Annotation( "obo:oba/patterns/entity_attribute_part_of") "The quality of a L-tyrosine aminotransferase activity.") -AnnotationAssertion(Annotation( "obo:oba/patterns/entity_attribute_part_of") "quality of L-tyrosine aminotransferase activity") -AnnotationAssertion(rdfs:label "L-tyrosine aminotransferase activity quality") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +AnnotationAssertion(Annotation( "obo:oba/patterns/entity_attribute_part_of") "The quality of a L-tyrosine-2-oxoglutarate transaminase activity.") +AnnotationAssertion(Annotation( "obo:oba/patterns/entity_attribute_part_of") "quality of L-tyrosine-2-oxoglutarate transaminase activity") +AnnotationAssertion(rdfs:label "L-tyrosine-2-oxoglutarate transaminase activity quality") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) # Class: (nephrogenic mesenchyme morphogenesis quality) @@ -60100,11 +60102,11 @@ AnnotationAssertion(Annotation( "papillary layer of dermis quality") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -# Class: (triglyceride lipase activity quality) +# Class: (triacylglycerol lipase activity quality) -AnnotationAssertion(Annotation( "obo:oba/patterns/entity_attribute_part_of") "The quality of a triglyceride lipase activity.") -AnnotationAssertion(Annotation( "obo:oba/patterns/entity_attribute_part_of") "quality of triglyceride lipase activity") -AnnotationAssertion(rdfs:label "triglyceride lipase activity quality") +AnnotationAssertion(Annotation( "obo:oba/patterns/entity_attribute_part_of") "The quality of a triacylglycerol lipase activity.") +AnnotationAssertion(Annotation( "obo:oba/patterns/entity_attribute_part_of") "quality of triacylglycerol lipase activity") +AnnotationAssertion(rdfs:label "triacylglycerol lipase activity quality") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) # Class: (estrus quality) @@ -121490,6 +121492,14 @@ AnnotationAssertion(Annotation( "level of plexin-B1 in blood") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) +# Class: (trait in response to gabapentin) + +AnnotationAssertion( "A trait that affects the response to a stimulus with gabapentin.") +AnnotationAssertion( "https://orcid.org/0000-0001-6757-4744") +AnnotationAssertion( "response to gabapentin trait") +AnnotationAssertion(rdfs:label "trait in response to gabapentin") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) + # Class: (aggressive behavior towards inanimate objects rate) AnnotationAssertion(Annotation( "AUTO:patterns/patterns/entity_attribute") "The rate of a aggressive behavior towards inanimate objects.") @@ -141135,9 +141145,8 @@ SubClassOf(ObjectIntersectionOf( Ob SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) +SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) -SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) -SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) @@ -141227,6 +141236,7 @@ SubClassOf(ObjectIntersectionOf( Ob SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) +SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) @@ -141260,7 +141270,6 @@ SubClassOf(ObjectIntersectionOf( Ob SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) -SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) @@ -141269,6 +141278,7 @@ SubClassOf(ObjectIntersectionOf( Ob SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) +SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ))) ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) From 4ecc67bc816e6a34b8f3b5a341a065500d04004d Mon Sep 17 00:00:00 2001 From: Arwa Ibrahim <97462656+ar-ibrahim@users.noreply.github.com> Date: Thu, 17 Oct 2024 13:58:03 +0100 Subject: [PATCH 2/2] Fixed GO obsoletion errors --- src/patterns/data/default/entity_attribute.tsv | 6 +++--- src/patterns/data/default/entity_attribute_part_of.tsv | 6 +++--- 2 files changed, 6 insertions(+), 6 deletions(-) diff --git a/src/patterns/data/default/entity_attribute.tsv b/src/patterns/data/default/entity_attribute.tsv index afb8e797..35d51aab 100644 --- a/src/patterns/data/default/entity_attribute.tsv +++ b/src/patterns/data/default/entity_attribute.tsv @@ -1820,7 +1820,7 @@ OBA:0002870 UBERON:0010747 body of ilium PATO:0000117 size OBA:0002871 UBERON:0014444 pubic ramus PATO:0000117 size OBA:0002872 UBERON:0002355 pelvic region of trunk PATO:0000117 size OBA:0002873 UBERON:0010890 pelvic complex muscle PATO:0000117 size -OBA:0002874 GO:0005746 mitochondrial respiratory chain PATO:0000161 rate +OBA:0002874 GO:0098803 respiratory chain complex PATO:0000161 rate OBA:0002875 UBERON:0002377 muscle of neck PATO:0000117 size OBA:0002876 UBERON:0001103 diaphragm PATO:0000070 amount OBA:0002877 UBERON:0001497 muscle of pelvic girdle PATO:0000117 size @@ -2218,7 +2218,7 @@ OBA:0003273 UBERON:0001042 chordate pharynx PATO:0000025 composition OBA:0003275 CL:0000233 platelet PATO:0002083 altered number of OBA:0003277 CL:0000233 platelet PATO:0000918 volume OBA:0003278 UBERON:0003635 pedal digit 5 PATO:0000122 length -OBA:0003279 GO:0005753 mitochondrial proton-transporting ATP synthase complex PATO:0000161 rate +OBA:0003279 GO:0045259 proton-transporting ATP synthase complex PATO:0000161 rate OBA:0003280 UBERON:0003631 pedal digit 1 PATO:0002181 displaced OBA:0003281 UBERON:0003868 proximal phalanx of pes PATO:0000122 length OBA:0003282 UBERON:0007709 superior cerebellar peduncle of pons PATO:0000122 length @@ -3923,7 +3923,7 @@ OBA:0006012 UBERON:0003924 ventral pancreatic bud PATO:0000117 size OBA:0006013 UBERON:0003923 dorsal pancreatic bud PATO:0000117 size OBA:0006014 GO:0050174 phenylalanine decarboxylase activity PATO:0000161 rate OBA:0006015 GO:0004104 cholinesterase activity PATO:0000161 rate -OBA:0006016 GO:0070547 L-tyrosine aminotransferase activity PATO:0000161 rate +OBA:0006016 GO:0004838 L-tyrosine-2-oxoglutarate transaminase activity PATO:0000161 rate OBA:0006017 GO:0004656 procollagen-proline 4-dioxygenase activity PATO:0000161 rate OBA:0006018 GO:0008119 thiopurine S-methyltransferase activity PATO:0000161 rate OBA:0006019 GO:0004511 tyrosine 3-monooxygenase activity PATO:0000161 rate diff --git a/src/patterns/data/default/entity_attribute_part_of.tsv b/src/patterns/data/default/entity_attribute_part_of.tsv index e5901ac7..5eba5c06 100644 --- a/src/patterns/data/default/entity_attribute_part_of.tsv +++ b/src/patterns/data/default/entity_attribute_part_of.tsv @@ -2461,7 +2461,7 @@ OBA:1000197 NBO:0000444 eye movement PATO:0000001 quality OBA:1000198 UBERON:0003723 vestibular nerve PATO:0000001 quality OBA:1000199 PR:000017364 von Willebrand factor PATO:0000001 quality OBA:1000200 UBERON:0001653 facial vein PATO:0000001 quality -OBA:1000201 GO:0005746 mitochondrial respiratory chain PATO:0000001 quality +OBA:1000201 GO:0098803 respiratory chain complex PATO:0000001 quality OBA:1000202 UBERON:0001867 cartilage of external ear PATO:0000001 quality OBA:1000203 UBERON:0001714 cranial ganglion PATO:0000001 quality OBA:1000204 UBERON:0004330 proximal phalanx of manual digit 4 PATO:0000001 quality @@ -2927,7 +2927,7 @@ OBA:1000676 GO:1903709 uterine gland development PATO:0000001 quality OBA:1000677 UBERON:0001839 bony labyrinth PATO:0000001 quality OBA:1000678 NBO:0000001 body part movement PATO:0000001 quality OBA:1000679 NBO:0001915 cocaine consumption PATO:0000001 quality -OBA:1000680 GO:0033878 hormone-sensitive lipase activity PATO:0000001 quality +OBA:1000680 GO:0120516 diacylglycerol lipase activity PATO:0000001 quality OBA:1000681 NBO:0000570 head bobbing PATO:0000001 quality OBA:1000682 UBERON:0005367 hippocampus granule cell layer PATO:0000001 quality OBA:1000683 GO:0045136 development of secondary sexual characteristics PATO:0000001 quality @@ -3088,7 +3088,7 @@ OBA:1000842 UBERON:0001849 membranous labyrinth PATO:0000001 quality OBA:1000843 GO:0001501 skeletal system development PATO:0000001 quality OBA:1000844 CL:0000653 glomerular visceral epithelial cell PATO:0000001 quality OBA:1000845 NBO:0000210 avoidance learning behavior PATO:0000001 quality -OBA:1000847 GO:0070547 L-tyrosine aminotransferase activity PATO:0000001 quality +OBA:1000847 GO:0004838 L-tyrosine-2-oxoglutarate transaminase activity PATO:0000001 quality OBA:1000848 GO:0072134 nephrogenic mesenchyme morphogenesis PATO:0000001 quality OBA:1000849 GO:0004465 lipoprotein lipase activity PATO:0000001 quality OBA:1000850 GO:0060659 nipple sheath formation PATO:0000001 quality