This is a shared repository to facilitate gathering resources useful for ongoing genomics work at across NMFS.
Initial plans are to:
- Omics tutorials
- Gather and link to existing tutorials and code relevant to lcWGS, gt-seq, etc.
- Write short tutorials for running various scripts that would broadly useful across many analyses (fastqc, trimming, bwa mem, etc).
- Develop specific tutorials for topics specific to various groups
- Gather a running database of omics publications and associated code: Found here
- How to make code and data reproducible and open?
- Submitting raw data to NCBI
- Submitting data/results to zenodo (or what is recommended by NMFS?)
- Github releases and linking to zenodo for publications
These plans are very preliminary and open to change and suggestion
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