From 115da67b15e3e5890e4c8c6463337a02c6e0bddb Mon Sep 17 00:00:00 2001 From: nipreps-bot Date: Thu, 5 Sep 2024 15:22:29 +0000 Subject: [PATCH] auto: deploy new website --- .../home/index.html | 99 +++++++++++++++++-- 1 file changed, 92 insertions(+), 7 deletions(-) diff --git a/assets/fmriprep-bootcamp-geneva2024/home/index.html b/assets/fmriprep-bootcamp-geneva2024/home/index.html index f95d394..105bc8c 100644 --- a/assets/fmriprep-bootcamp-geneva2024/home/index.html +++ b/assets/fmriprep-bootcamp-geneva2024/home/index.html @@ -360,6 +360,16 @@ text-align: right; } + .program-table td:nth-child(2) { + font-size: 1.2em; + + } + .program-table td:nth-child(1) { + font-size: 0.9em; + color: #999; + padding-right: 20px; + } + @@ -402,14 +412,14 @@ https://www.nipreps.org/assets/fmriprep-bootcamp-geneva2024/home/ -

-.large[] - -## fMRIPrep Bootcamp +## CIBM's First fMRIPrep Bootcamp +CMU, Geneva, September 9-11, 2024 +
+.large[ Get started] ] ??? @@ -429,7 +439,7 @@ --- -# Program +# Program | Day 1 .right-column3.center[ @@ -439,16 +449,91 @@ ] +
.left-column3[ +.program-table[ +| | | +|---:|---| +| 8h30 | Welcome & breakfast | +| 9h00 | Opening | +| 9h30 | [Overview of the fMRI neuroimaging pipeline & fMRIPrep](/assets/fmriprep-bootcamp-geneva2024/day1-01-fmriprep-primer) | +| 10h30 | Coffee break | +| 10h45 | [The Brain Imaging Data Structure (BIDS)](/assets/fmriprep-bootcamp-geneva2024/day1-02-bids) | +| 11h30 | [BIDS hands-on](/assets/fmriprep-bootcamp-geneva2024/day1-03-bids-convert-a-dataset) | +| 12h00 | Lunch break | +| 13h30 | Hands-on: making data available on HPC | +| 14h30 | Containers | +| 15h00 | Coffee break | +| 15h15 | Hands-on: Apptainer within HPC Unige | +| 16h00 | Hands-on: run fMRIPrep on the dataset | +| 17h00 | End | +]] -.large[ +??? -* +--- + +# Program | Day 2 + +.right-column3.center[ + + workflow +
+ https://www.nipreps.org/assets/fmriprep-bootcamp-geneva2024/home/ + +] + +
+.left-column3[ +.program-table[ +| | | +|---:|---| +| 8h30 | Welcome & breakfast | +| 9h00 | Execution forensics: did it work? | +| 9h30 | Resource planning, parallelization | +| 10h30 | Coffee break | +| 10h45 | Analysis of the *mixed* task | +| 12h00 | Lunch break | +| 13h30 | MRIQC and QA/QC | +| 15h00 | Coffee break | +| 15h15 | Hands-on: Running *fMRIPrep* on your data on cluster | +| 16h00 | Preparation of the hackathon (groups, projects) | +| 17h00 | End | ]] ??? +--- + +# Program | Day 3 (Hackathon) + +.right-column3.center[ + + workflow +
+ https://www.nipreps.org/assets/fmriprep-bootcamp-geneva2024/home/ + +] + + +
+.left-column3[ +.program-table[ +| | | +|---:|---| +| 8h30 | Welcome & breakfast | +| 9h00 | Project pitches | +| | Coffee break | +| | **Hacking!** | +| 12h00 | Lunch break | +| 13h00 | **Hacking!** | +| 15h00 | Coffee break | +| 15h15 | Round table and showcasing results | +| 16h30 | End | +]] + +???