pythonpackage.yml

# This workflow will install Python dependencies, run tests and lint with a variety of Python versions
# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions

name: Python package

on:
  push:
    branches: [ '*' ]
    tags: [ '*' ]
  pull_request:
    branches: [ main, 'maint/*' ]

jobs:
  build:
    if: "!contains(github.event.head_commit.message, '[skip ci]')"
    runs-on: ubuntu-latest
    strategy:
      matrix:
        python-version: [3.7, 3.8, 3.9]

    steps:
    - name: Set up Python ${{ matrix.python-version }}
      uses: actions/setup-python@v2
      with:
        python-version: ${{ matrix.python-version }}
    - uses: actions/checkout@v2
      with:
        ssh-key: "${{ secrets.NIPREPS_DEPLOY }}"
        fetch-depth: 0
    - name: Build in confined, updated environment and interpolate version
      run: |
        python -m venv /tmp/buildenv
        source /tmp/buildenv/bin/activate
        python -m pip install -U "setuptools~=58.0" "setuptools_scm>=6.2" pip wheel twine docutils

        # Interpolate version
        if [[ "$GITHUB_REF" == refs/tags/* ]]; then
          TAG=${GITHUB_REF##*/}
        fi
        THISVERSION=$( python setup.py --version )
        THISVERSION=${TAG:-$THISVERSION}
        echo "Expected VERSION: \"${THISVERSION}\""
        echo "THISVERSION=${THISVERSION}" >> ${GITHUB_ENV}

        python setup.py sdist
        python -m twine check dist/mriqc-learn-${THISVERSION}.tar.gz

        python setup.py bdist_wheel
        python -m twine check dist/mriqc_learn-${THISVERSION}-py3-none-any.whl

    - name: Install in confined environment [sdist]
      run: |
        python -m venv /tmp/install_sdist
        source /tmp/install_sdist/bin/activate
        python -m pip install --upgrade pip wheel
        python -m pip install dist/mriqc-learn-${THISVERSION}.tar.gz
        INSTALLED_VERSION=$(python -c 'import mriqc_learn; print(mriqc_learn.__version__, end="")')
        echo "VERSION: \"${THISVERSION}\""
        echo "INSTALLED: \"${INSTALLED_VERSION}\""
        test "${INSTALLED_VERSION}" = "${THISVERSION}"
    - name: Install in confined environment [wheel]
      run: |
        python -m venv /tmp/install_wheel
        source /tmp/install_wheel/bin/activate
        python -m pip install --upgrade pip wheel
        python -m pip install dist/mriqc_learn-${THISVERSION}-py3-none-any.whl
        INSTALLED_VERSION=$(python -c 'import mriqc_learn; print(mriqc_learn.__version__, end="")')
        echo "INSTALLED: \"${INSTALLED_VERSION}\""
        test "${INSTALLED_VERSION}" = "${THISVERSION}"
    - name: Install in confined environment [pip install .]
      run: |
        python -m venv /tmp/setup_install
        source /tmp/setup_install/bin/activate
        python -m pip install --upgrade pip wheel
        python -m pip install .
        INSTALLED_VERSION=$(python -c 'import mriqc_learn; print(mriqc_learn.__version__, end="")')
        echo "INSTALLED: \"${INSTALLED_VERSION}\""
        test "${INSTALLED_VERSION}" = "${THISVERSION}"
    - name: Install in confined environment [pip install -e .]
      run: |
        python -m venv /tmp/setup_develop
        source /tmp/setup_develop/bin/activate
        python -m pip install pip
        python -m pip install --upgrade pip wheel
        python -m pip install -e .
        INSTALLED_VERSION=$(python -c 'import mriqc_learn; print(mriqc_learn.__version__, end="")')
        echo "INSTALLED: \"${INSTALLED_VERSION}\""
        test "${INSTALLED_VERSION}" = "${THISVERSION}"
  flake8:
    runs-on: ubuntu-latest
    steps:
    - uses: actions/checkout@v2
    - name: Set up Python 3.7
      uses: actions/setup-python@v1
      with:
        python-version: 3.7
    - run: pip install flake8
    - run: flake8 mriqc_learn/