diff --git a/requirements.txt b/requirements.txt
index 1f94ac07..62d93145 100644
--- a/requirements.txt
+++ b/requirements.txt
@@ -1,5 +1,6 @@
 # This file was autogenerated by uv via the following command:
 #    uv pip compile --extra=container --strip-extras pyproject.toml -o requirements.txt -P 3.10
+acres==0.1.0
 annexremote==1.6.5
     # via
     #   datalad
@@ -18,13 +19,13 @@ bids-validator==1.14.6
     # via pybids
 bokeh==3.4.1
     # via tedana
-boto3==1.34.127
+boto3==1.34.144
     # via datalad
-botocore==1.34.127
+botocore==1.34.144
     # via
     #   boto3
     #   s3transfer
-certifi==2024.6.2
+certifi==2024.7.4
     # via
     #   requests
     #   sentry-sdk
@@ -43,7 +44,7 @@ click==8.1.7
     #   codecarbon
     #   nipype
     #   pybids
-codecarbon==2.4.2
+codecarbon==2.5.0
 contourpy==1.2.1
     # via
     #   bokeh
@@ -52,7 +53,7 @@ cryptography==42.0.8
     # via secretstorage
 cycler==0.12.1
     # via matplotlib
-datalad==1.1.0
+datalad==1.1.1
     # via
     #   datalad-next
     #   datalad-osf
@@ -67,9 +68,9 @@ etelemetry==0.3.1
     # via nipype
 fasteners==0.19
     # via datalad
-filelock==3.15.1
+filelock==3.15.4
     # via nipype
-fonttools==4.53.0
+fonttools==4.53.1
     # via matplotlib
 formulaic==0.5.2
     # via pybids
@@ -77,13 +78,13 @@ greenlet==3.0.3
     # via sqlalchemy
 h5py==3.11.0
     # via nitransforms
-humanize==4.9.0
+humanize==4.10.0
     # via
     #   datalad
     #   datalad-next
 idna==3.7
     # via requests
-imageio==2.34.1
+imageio==2.34.2
     # via scikit-image
 indexed-gzip==1.8.7
     # via smriprep
@@ -146,7 +147,7 @@ mapca==0.0.5
     # via tedana
 markupsafe==2.1.5
     # via jinja2
-matplotlib==3.8.4
+matplotlib==3.9.1
     # via
     #   nireports
     #   nitime
@@ -193,7 +194,7 @@ nipype==1.8.6
     #   sdcflows
     #   smriprep
 nireports==23.2.1
-nitime==0.10.2
+nitime==0.11
 nitransforms==23.0.1
     # via
     #   niworkflows
@@ -257,9 +258,9 @@ pandas==2.2.2
     #   pybids
     #   seaborn
     #   tedana
-patool==2.2.0
+patool==2.3.0
     # via datalad
-pillow==10.3.0
+pillow==10.4.0
     # via
     #   bokeh
     #   imageio
@@ -271,7 +272,7 @@ prometheus-client==0.20.0
     # via codecarbon
 prov==2.0.1
     # via nipype
-psutil==5.9.8
+psutil==6.0.0
     # via codecarbon
 py-cpuinfo==9.0.0
     # via codecarbon
@@ -288,9 +289,9 @@ pybtex-apa-style==1.3
     # via tedana
 pycparser==2.22
     # via cffi
-pydot==2.0.0
+pydot==3.0.1
     # via nipype
-pynvml==11.5.0
+pynvml==11.5.3
     # via codecarbon
 pyparsing==3.1.2
     # via
@@ -305,7 +306,7 @@ python-dateutil==2.9.0.post0
     #   nipype
     #   pandas
     #   prov
-python-gitlab==4.6.0
+python-gitlab==4.8.0
     # via datalad
 pytz==2024.1
     # via
@@ -318,7 +319,7 @@ pyyaml==6.0.1
     #   niworkflows
     #   pybtex
     #   smriprep
-rapidfuzz==3.9.3
+rapidfuzz==3.9.4
     # via codecarbon
 rdflib==6.3.2
     # via
@@ -336,9 +337,9 @@ requests==2.32.3
     #   templateflow
 requests-toolbelt==1.0.0
     # via python-gitlab
-s3transfer==0.10.1
+s3transfer==0.10.2
     # via boto3
-scikit-image==0.23.2
+scikit-image==0.24.0
     # via
     #   niworkflows
     #   sdcflows
@@ -368,7 +369,7 @@ seaborn==0.13.2
     #   niworkflows
 secretstorage==3.3.3
     # via keyring
-sentry-sdk==2.5.1
+sentry-sdk==2.10.0
 simplejson==3.19.2
     # via nipype
 six==1.16.0
@@ -379,7 +380,7 @@ six==1.16.0
     #   pybtex
     #   python-dateutil
 smriprep==0.15.0
-sqlalchemy==2.0.30
+sqlalchemy==2.0.31
     # via pybids
 svgutils==0.3.4
     # via
@@ -396,7 +397,7 @@ threadpoolctl==3.5.0
     # via
     #   scikit-learn
     #   tedana
-tifffile==2024.5.22
+tifffile==2024.7.2
     # via scikit-image
 toml==0.10.2
     # via sdcflows