ci.yml

name: Continuous Integration

on:
  pull_request: { branches: [ "main","develop" ] }
  push:
    branches: [ "main","develop" ]
    tags: [ "*" ]
env:
  KUBECONFIG: .kube/config
  KUBECONFIG_FILE: ${{ secrets.KUBECONFIG }}
  GIT_SHA: ${{ github.event.pull_request.head.sha || github.sha }}
  NPM_TOKEN: ${{ secrets.GITHUB_TOKEN }}
jobs:
  build:
    name: "Build Image"
    runs-on: ubuntu-latest
    steps:
      - name: Checkout
        uses: actions/checkout@v2
      - id: generate-image-tag
        name: Generate Image Tag
        env:
          ref_name: "${{ github.ref_name }}"
          head_ref: "${{ github.head_ref }}"
        run: |
          head_ref="${head_ref/\//-}"
          ref_name="${head_ref:-${ref_name/main/latest}}"
          echo "::set-output name=imageTag::${ref_name#v}"
      - name: Login to Container Registry
        uses: docker/login-action@v1
        with:
          registry: ghcr.io
          username: ${{ github.actor }}
          password: ${{ secrets.GITHUB_TOKEN }}
      - name: Build and Push Backend
        uses: docker/build-push-action@v2
        with:
          context: ./backend
          push: true
          tags: |
            ghcr.io/${{ github.repository }}/backend:${{ steps.generate-image-tag.outputs.imageTag }}
            ghcr.io/${{ github.repository }}/backend:${{ github.event.pull_request.head.sha || github.sha }}
          build-args: |
            COMMIT_SHA=${{ github.sha }}
      - uses: actions/setup-node@v3
        with:
          node-version: '17.x'
          registry-url: 'https://npm.pkg.github.com/'
      - run: npm ci --legacy-peer-deps
        env:
          NODE_AUTH_TOKEN: ${{ secrets.GITHUB_TOKEN }}
        working-directory: ./frontend
      - run: npm run build
        env:
          CI: false
        working-directory: ./frontend
      - name: Build and Push Frontend
        uses: docker/build-push-action@v2
        with:
          context: ./frontend
          push: true
          tags: |
            ghcr.io/${{ github.repository }}/frontend:${{ steps.generate-image-tag.outputs.imageTag }}
            ghcr.io/${{ github.repository }}/frontend:${{ github.event.pull_request.head.sha || github.sha }}
  deploy_development:
    needs: build
    if: github.ref == 'refs/heads/develop'
    runs-on: ubuntu-latest
    steps:
    - id: generate-image-tag
      name: Generate Image Tag
      env:
        ref_name: "${{ github.ref_name }}"
        head_ref: "${{ github.head_ref }}"
      run: |
        head_ref="${head_ref/\//-}"
        ref_name="${head_ref:-${ref_name/main/latest}}"
        echo "::set-output name=imageTag::${ref_name#v}"
    - uses: actions/checkout@v2
    - run: |
        mkdir -p .kube
        echo "${{ env.KUBECONFIG_FILE }}" > $KUBECONFIG
    - uses: stefanprodan/kube-tools@v1
      with:
        helmv3: 3.12.0
        command: |
          kubectl get nodes
          helmv3 repo add mda-deployment https://nfdi4health.github.io/mda-deployment/
          helmv3 repo update
          helmv3 upgrade mda-${{ steps.generate-image-tag.outputs.imageTag }} \
          --install \
          --set-json='images.backend="ghcr.io/${{ github.repository }}/backend:${{ github.event.pull_request.head.sha || github.sha }}"' \
          --set-json='images.frontend="ghcr.io/${{ github.repository }}/frontend:${{ github.event.pull_request.head.sha || github.sha }}"'  \
          --set-json='images.prediction="gitlab.zbmed.de:5050/km/thesis/pierre-ba/backend:a7d3254ee488a236dade40ecedc646861aff9dbe"'  \
          --set-json='ingress.dns="${{ steps.generate-image-tag.outputs.imageTag }}.mda.qa.km.k8s.zbmed.de"'  \
          mda-deployment/metadata-annotation
  deploy_main:
    needs: build
    if: github.ref == 'refs/heads/main'
    runs-on: ubuntu-latest
    steps:
    - id: generate-image-tag
      name: Generate Image Tag
      env:
        ref_name: "${{ github.ref_name }}"
        head_ref: "${{ github.head_ref }}"
      run: |
        head_ref="${head_ref/\//-}"
        ref_name="${head_ref:-${ref_name/main/latest}}"
        echo "::set-output name=imageTag::${ref_name#v}"
    - uses: actions/checkout@v2
    - run: |
        mkdir -p .kube
        echo "${{ env.KUBECONFIG_FILE }}" > $KUBECONFIG
    - uses: stefanprodan/kube-tools@v1
      with:
        helmv3: 3.12.0
        command: |
          kubectl get nodes
          helmv3 repo add mda-deployment https://nfdi4health.github.io/mda-deployment/
          helmv3 repo update
          helmv3 upgrade mda-${{ steps.generate-image-tag.outputs.imageTag }} \
          --install \
          --set-json='images.backend="ghcr.io/${{ github.repository }}/backend:${{ github.event.pull_request.head.sha || github.sha }}"' \
          --set-json='images.frontend="ghcr.io/${{ github.repository }}/frontend:${{ github.event.pull_request.head.sha || github.sha }}"'  \
          --set-json='images.prediction="gitlab.zbmed.de:5050/km/thesis/pierre-ba/backend:a7d3254ee488a236dade40ecedc646861aff9dbe"'  \
          --set-json='ingress.dns="${{ steps.generate-image-tag.outputs.imageTag }}.mda.qa.km.k8s.zbmed.de"'  \
          mda-deployment/metadata-annotation