diff --git a/modules/local/collect_featurecounts.nf b/modules/local/collect_featurecounts.nf
index e728c7e1..34e349b5 100644
--- a/modules/local/collect_featurecounts.nf
+++ b/modules/local/collect_featurecounts.nf
@@ -2,10 +2,10 @@ process COLLECT_FEATURECOUNTS {
     tag "$meta.id"
     label 'process_high'
 
-    conda "conda-forge::r-tidyverse=1.3.1 conda-forge::r-data.table=1.14.0 conda-forge::r-dtplyr=1.1.0"
+    conda "conda-forge::r-tidyverse=2.0.0 conda-forge::r-dtplyr=1.3.1 conda-forge::r-data.table=1.14.8"
     container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
-        'https://depot.galaxyproject.org/singularity/mulled-v2-508c9bc5e929a77a9708902b1deca248c0c84689:0bb5bee2557136d28549f41d3faa08485e967aa1-0' :
-        'biocontainers/mulled-v2-508c9bc5e929a77a9708902b1deca248c0c84689:0bb5bee2557136d28549f41d3faa08485e967aa1-0' }"
+        'https://depot.galaxyproject.org/singularity/mulled-v2-b2ec1fea5791d428eebb8c8ea7409c350d31dada:a447f6b7a6afde38352b24c30ae9cd6e39df95c4-1' :
+        'biocontainers/mulled-v2-b2ec1fea5791d428eebb8c8ea7409c350d31dada:a447f6b7a6afde38352b24c30ae9cd6e39df95c4-1' }"
 
     input:
     tuple val(meta), path(inputfiles)
diff --git a/modules/local/collect_stats.nf b/modules/local/collect_stats.nf
index cf26610f..59ab2ffa 100644
--- a/modules/local/collect_stats.nf
+++ b/modules/local/collect_stats.nf
@@ -2,10 +2,10 @@ process COLLECT_STATS {
     tag "$meta.id"
     label 'process_low'
 
-    conda "conda-forge::r-tidyverse=1.3.1 conda-forge::r-data.table=1.14.0 conda-forge::r-dtplyr=1.1.0"
+    conda "conda-forge::r-tidyverse=2.0.0 conda-forge::r-dtplyr=1.3.1 conda-forge::r-data.table=1.14.8"
     container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
-        'https://depot.galaxyproject.org/singularity/mulled-v2-508c9bc5e929a77a9708902b1deca248c0c84689:0bb5bee2557136d28549f41d3faa08485e967aa1-0' :
-        'biocontainers/mulled-v2-508c9bc5e929a77a9708902b1deca248c0c84689:0bb5bee2557136d28549f41d3faa08485e967aa1-0' } "
+        'https://depot.galaxyproject.org/singularity/mulled-v2-b2ec1fea5791d428eebb8c8ea7409c350d31dada:a447f6b7a6afde38352b24c30ae9cd6e39df95c4-1' :
+        'biocontainers/mulled-v2-b2ec1fea5791d428eebb8c8ea7409c350d31dada:a447f6b7a6afde38352b24c30ae9cd6e39df95c4-1' }"
 
     input:
     tuple val(meta), val(samples), path(trimlogs), path(bblogs), path(idxstats), path(fcs), path(mergetab)
diff --git a/modules/local/eggnog/sum.nf b/modules/local/eggnog/sum.nf
index 5532bc83..741ea1bb 100644
--- a/modules/local/eggnog/sum.nf
+++ b/modules/local/eggnog/sum.nf
@@ -2,10 +2,10 @@ process EGGNOG_SUM {
     tag "$meta.id"
     label 'process_low'
 
-    conda "conda-forge::r-tidyverse=1.3.1 conda-forge::r-data.table=1.14.0 conda-forge::r-dtplyr=1.1.0"
+    conda "conda-forge::r-tidyverse=2.0.0 conda-forge::r-dtplyr=1.3.1 conda-forge::r-data.table=1.14.8"
     container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
-    'https://depot.galaxyproject.org/singularity/mulled-v2-508c9bc5e929a77a9708902b1deca248c0c84689:0bb5bee2557136d28549f41d3faa08485e967aa1-0' :
-    'biocontainers/mulled-v2-508c9bc5e929a77a9708902b1deca248c0c84689:0bb5bee2557136d28549f41d3faa08485e967aa1-0' } "
+        'https://depot.galaxyproject.org/singularity/mulled-v2-b2ec1fea5791d428eebb8c8ea7409c350d31dada:a447f6b7a6afde38352b24c30ae9cd6e39df95c4-1' :
+        'biocontainers/mulled-v2-b2ec1fea5791d428eebb8c8ea7409c350d31dada:a447f6b7a6afde38352b24c30ae9cd6e39df95c4-1' }"
 
     input:
 
diff --git a/modules/local/format_tax.nf b/modules/local/format_tax.nf
index ee7d27ca..eb21b89a 100644
--- a/modules/local/format_tax.nf
+++ b/modules/local/format_tax.nf
@@ -2,10 +2,10 @@ process FORMAT_TAX {
     tag "$meta.id"
     label 'process_low'
 
-    conda "conda-forge::r-tidyverse=1.3.1 conda-forge::r-data.table=1.14.0 conda-forge::r-dtplyr=1.1.0"
+    conda "conda-forge::r-tidyverse=2.0.0 conda-forge::r-dtplyr=1.3.1 conda-forge::r-data.table=1.14.8"
     container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
-        'https://depot.galaxyproject.org/singularity/mulled-v2-508c9bc5e929a77a9708902b1deca248c0c84689:0bb5bee2557136d28549f41d3faa08485e967aa1-0' :
-        'biocontainers/mulled-v2-508c9bc5e929a77a9708902b1deca248c0c84689:0bb5bee2557136d28549f41d3faa08485e967aa1-0' }"
+        'https://depot.galaxyproject.org/singularity/mulled-v2-b2ec1fea5791d428eebb8c8ea7409c350d31dada:a447f6b7a6afde38352b24c30ae9cd6e39df95c4-1' :
+        'biocontainers/mulled-v2-b2ec1fea5791d428eebb8c8ea7409c350d31dada:a447f6b7a6afde38352b24c30ae9cd6e39df95c4-1' }"
 
     input:
     tuple val(meta), path(taxtable)
diff --git a/modules/local/hmmrank.nf b/modules/local/hmmrank.nf
index 0c61b17c..349b1da9 100644
--- a/modules/local/hmmrank.nf
+++ b/modules/local/hmmrank.nf
@@ -2,10 +2,10 @@ process HMMRANK {
     tag "$meta.id"
     label 'process_low'
 
-    conda "conda-forge::r-tidyverse=1.3.1 conda-forge::r-data.table=1.14.0 conda-forge::r-dtplyr=1.1.0"
+    conda "conda-forge::r-tidyverse=2.0.0 conda-forge::r-dtplyr=1.3.1 conda-forge::r-data.table=1.14.8"
     container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
-        'https://depot.galaxyproject.org/singularity/mulled-v2-508c9bc5e929a77a9708902b1deca248c0c84689:0bb5bee2557136d28549f41d3faa08485e967aa1-0' :
-        'biocontainers/mulled-v2-508c9bc5e929a77a9708902b1deca248c0c84689:0bb5bee2557136d28549f41d3faa08485e967aa1-0' } "
+        'https://depot.galaxyproject.org/singularity/mulled-v2-b2ec1fea5791d428eebb8c8ea7409c350d31dada:a447f6b7a6afde38352b24c30ae9cd6e39df95c4-1' :
+        'biocontainers/mulled-v2-b2ec1fea5791d428eebb8c8ea7409c350d31dada:a447f6b7a6afde38352b24c30ae9cd6e39df95c4-1' }"
 
     input:
     tuple val(meta), path(hmmtargsums)
diff --git a/modules/local/merge_summary_tables.nf b/modules/local/merge_summary_tables.nf
index 2dfba7d9..e6537f88 100644
--- a/modules/local/merge_summary_tables.nf
+++ b/modules/local/merge_summary_tables.nf
@@ -2,10 +2,10 @@ process MERGE_TABLES {
     tag "$meta.id"
     label 'process_low'
 
-    conda "conda-forge::r-tidyverse=1.3.1 conda-forge::r-data.table=1.14.0 conda-forge::r-dtplyr=1.1.0"
+    conda "conda-forge::r-tidyverse=2.0.0 conda-forge::r-dtplyr=1.3.1 conda-forge::r-data.table=1.14.8"
     container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
-    'https://depot.galaxyproject.org/singularity/mulled-v2-508c9bc5e929a77a9708902b1deca248c0c84689:0bb5bee2557136d28549f41d3faa08485e967aa1-0' :
-    'biocontainers/mulled-v2-508c9bc5e929a77a9708902b1deca248c0c84689:0bb5bee2557136d28549f41d3faa08485e967aa1-0' } "
+        'https://depot.galaxyproject.org/singularity/mulled-v2-b2ec1fea5791d428eebb8c8ea7409c350d31dada:a447f6b7a6afde38352b24c30ae9cd6e39df95c4-1' :
+        'biocontainers/mulled-v2-b2ec1fea5791d428eebb8c8ea7409c350d31dada:a447f6b7a6afde38352b24c30ae9cd6e39df95c4-1' }"
 
     input:
 
diff --git a/modules/local/sum_kofamscan.nf b/modules/local/sum_kofamscan.nf
index 67443787..ceef2de3 100644
--- a/modules/local/sum_kofamscan.nf
+++ b/modules/local/sum_kofamscan.nf
@@ -2,10 +2,10 @@ process SUM_KOFAMSCAN {
     tag "$meta.id"
     label 'process_low'
 
-    conda "conda-forge::r-tidyverse=1.3.1 conda-forge::r-data.table=1.14.0 conda-forge::r-dtplyr=1.1.0"
+    conda "conda-forge::r-tidyverse=2.0.0 conda-forge::r-dtplyr=1.3.1 conda-forge::r-data.table=1.14.8"
     container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
-    'https://depot.galaxyproject.org/singularity/mulled-v2-508c9bc5e929a77a9708902b1deca248c0c84689:0bb5bee2557136d28549f41d3faa08485e967aa1-0' :
-    'biocontainers/mulled-v2-508c9bc5e929a77a9708902b1deca248c0c84689:0bb5bee2557136d28549f41d3faa08485e967aa1-0' } "
+        'https://depot.galaxyproject.org/singularity/mulled-v2-b2ec1fea5791d428eebb8c8ea7409c350d31dada:a447f6b7a6afde38352b24c30ae9cd6e39df95c4-1' :
+        'biocontainers/mulled-v2-b2ec1fea5791d428eebb8c8ea7409c350d31dada:a447f6b7a6afde38352b24c30ae9cd6e39df95c4-1' }"
 
     input:
 
diff --git a/modules/local/sum_taxonomy.nf b/modules/local/sum_taxonomy.nf
index 5b802484..1edd97ab 100644
--- a/modules/local/sum_taxonomy.nf
+++ b/modules/local/sum_taxonomy.nf
@@ -2,10 +2,10 @@ process SUM_TAXONOMY {
     tag "$meta.id"
     label 'process_low'
 
-    conda "conda-forge::r-tidyverse=1.3.1 conda-forge::r-data.table=1.14.0 conda-forge::r-dtplyr=1.1.0"
+    conda "conda-forge::r-tidyverse=2.0.0 conda-forge::r-dtplyr=1.3.1 conda-forge::r-data.table=1.14.8"
     container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
-    'https://depot.galaxyproject.org/singularity/mulled-v2-508c9bc5e929a77a9708902b1deca248c0c84689:0bb5bee2557136d28549f41d3faa08485e967aa1-0' :
-    'biocontainers/mulled-v2-508c9bc5e929a77a9708902b1deca248c0c84689:0bb5bee2557136d28549f41d3faa08485e967aa1-0' } "
+        'https://depot.galaxyproject.org/singularity/mulled-v2-b2ec1fea5791d428eebb8c8ea7409c350d31dada:a447f6b7a6afde38352b24c30ae9cd6e39df95c4-1' :
+        'biocontainers/mulled-v2-b2ec1fea5791d428eebb8c8ea7409c350d31dada:a447f6b7a6afde38352b24c30ae9cd6e39df95c4-1' }"
 
     input: