MultiQC report is empty

[matthdsm]

Description of the bug

Successful run yields empty MQC report

Command used and terminal output

No response

Relevant files

No response

System information

No response

[matthdsm]

fixed in #63

[berguner]

Hi @matthdsm,
I am still getting empty Multiqc reports unfortunately. It was fine when I was using the fix/bclconvert branch. I had to start using the master branch because the fix branch was merged and I started getting the empty Multiqc reports. I also ran the pipeline locally with -profile test,docker and it didn't even produce a Multiqc report. I pulled the repo to make sure that I am running the latest version (b0a004e) .

[matthdsm]

Hi! Please try running the dev version, the fixes haven’t been merged into main AFAIK. Matthias Op 3 jan. 2023 om 17:16 heeft Bekir Ergüner ***@***.***> het volgende geschreven:  Hi @matthdsm<https://eur03.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2Fmatthdsm&data=05%7C01%7CMatthias.DeSmet%40ugent.be%7Cfc301809ebda4fff087308daeda5d5ee%7Cd7811cdeecef496c8f91a1786241b99c%7C1%7C0%7C638083593752637489%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000%7C%7C%7C&sdata=XTu42tkPU%2BAhSWEbfITh%2BhSoopk4WAyYOjjZpDsDhwE%3D&reserved=0>, I am still getting empty Multiqc reports unfortunately. It was fine when I was using the fix/bclconvert branch. I had to start using the master branch because the fix branch was merged and I started getting the empty Multiqc reports. I also ran the pipeline locally with -profile test,docker and it didn't even produce a Multiqc report. I pulled the repo to make sure that I am running the latest version (b0a004e<https://eur03.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2Fnf-core%2Fdemultiplex%2Fcommit%2Fb0a004eb2e79f6fceb9b5d79b91b563b7724ed62&data=05%7C01%7CMatthias.DeSmet%40ugent.be%7Cfc301809ebda4fff087308daeda5d5ee%7Cd7811cdeecef496c8f91a1786241b99c%7C1%7C0%7C638083593752637489%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000%7C%7C%7C&sdata=kiyoBP2f89I0qshR%2FWTVDh3jSIpTIg%2F1s%2F25MuPJBxs%3D&reserved=0>) . — Reply to this email directly, view it on GitHub<https://eur03.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2Fnf-core%2Fdemultiplex%2Fissues%2F64%23issuecomment-1369957508&data=05%7C01%7CMatthias.DeSmet%40ugent.be%7Cfc301809ebda4fff087308daeda5d5ee%7Cd7811cdeecef496c8f91a1786241b99c%7C1%7C0%7C638083593752793721%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000%7C%7C%7C&sdata=TUBXvuOMZMKprjbswiqwzSYKkdaEvLuESn0pe%2BLThhQ%3D&reserved=0>, or unsubscribe<https://eur03.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2Fnotifications%2Funsubscribe-auth%2FAC2NHEBLL57YU6W6MNBN6KDWQRGEZANCNFSM6AAAAAARD5SUDE&data=05%7C01%7CMatthias.DeSmet%40ugent.be%7Cfc301809ebda4fff087308daeda5d5ee%7Cd7811cdeecef496c8f91a1786241b99c%7C1%7C0%7C638083593752793721%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000%7C%7C%7C&sdata=rxrxemr8S4A26irj%2BOwYI1jDFNec%2FX%2FM0rR7iwBm5JU%3D&reserved=0>. You are receiving this because you were mentioned.Message ID: ***@***.***>

[edmundmiller]

This is happening for bclconvert again. I think I haven't dug into it a ton yet.