From dbf76fb33cce93c9956e1e8e3239449a613105fa Mon Sep 17 00:00:00 2001 From: ivan-aksamentov Date: Wed, 4 Dec 2024 15:46:17 +0100 Subject: [PATCH] chore: rebuild --- .../iav-h5/ha/2.3.4.4/unreleased/CHANGELOG.md | 13 + .../iav-h5/ha/2.3.4.4/unreleased/README.md | 49 + .../iav-h5/ha/2.3.4.4/unreleased/dataset.zip | Bin 0 -> 32247312 bytes .../unreleased/example_sequences.fasta | 580 + .../2.3.4.4/unreleased/genome_annotation.gff3 | 3 + .../ha/2.3.4.4/unreleased/pathogen.json | 134 + .../ha/2.3.4.4/unreleased/reference.fasta | 23 + .../iav-h5/ha/2.3.4.4/unreleased/tree.json | 206596 +++++++++++++++ .../ha/all-clades/unreleased/CHANGELOG.md | 9 + .../iav-h5/ha/all-clades/unreleased/README.md | 34 + .../ha/all-clades/unreleased/dataset.zip | Bin 0 -> 11425569 bytes .../unreleased/example_sequences.fasta | 1455 + .../unreleased/genome_annotation.gff3 | 3 + .../ha/all-clades/unreleased/pathogen.json | 134 + .../ha/all-clades/unreleased/reference.fasta | 31 + .../iav-h5/ha/all-clades/unreleased/tree.json | 99021 +++++++ data_output/index.json | 20 +- 17 files changed, 308101 insertions(+), 4 deletions(-) create mode 100644 data_output/community/moncla-lab/iav-h5/ha/2.3.4.4/unreleased/CHANGELOG.md create mode 100644 data_output/community/moncla-lab/iav-h5/ha/2.3.4.4/unreleased/README.md create mode 100644 data_output/community/moncla-lab/iav-h5/ha/2.3.4.4/unreleased/dataset.zip create mode 100644 data_output/community/moncla-lab/iav-h5/ha/2.3.4.4/unreleased/example_sequences.fasta create mode 100644 data_output/community/moncla-lab/iav-h5/ha/2.3.4.4/unreleased/genome_annotation.gff3 create mode 100644 data_output/community/moncla-lab/iav-h5/ha/2.3.4.4/unreleased/pathogen.json create mode 100644 data_output/community/moncla-lab/iav-h5/ha/2.3.4.4/unreleased/reference.fasta create mode 100644 data_output/community/moncla-lab/iav-h5/ha/2.3.4.4/unreleased/tree.json create mode 100644 data_output/community/moncla-lab/iav-h5/ha/all-clades/unreleased/CHANGELOG.md create mode 100644 data_output/community/moncla-lab/iav-h5/ha/all-clades/unreleased/README.md create mode 100644 data_output/community/moncla-lab/iav-h5/ha/all-clades/unreleased/dataset.zip create mode 100644 data_output/community/moncla-lab/iav-h5/ha/all-clades/unreleased/example_sequences.fasta create mode 100644 data_output/community/moncla-lab/iav-h5/ha/all-clades/unreleased/genome_annotation.gff3 create mode 100644 data_output/community/moncla-lab/iav-h5/ha/all-clades/unreleased/pathogen.json create mode 100644 data_output/community/moncla-lab/iav-h5/ha/all-clades/unreleased/reference.fasta create mode 100644 data_output/community/moncla-lab/iav-h5/ha/all-clades/unreleased/tree.json diff --git a/data_output/community/moncla-lab/iav-h5/ha/2.3.4.4/unreleased/CHANGELOG.md b/data_output/community/moncla-lab/iav-h5/ha/2.3.4.4/unreleased/CHANGELOG.md new file mode 100644 index 00000000..e7737ca3 --- /dev/null +++ b/data_output/community/moncla-lab/iav-h5/ha/2.3.4.4/unreleased/CHANGELOG.md @@ -0,0 +1,13 @@ +## Unreleased + +Updated private mutation QC metrics such that the typical value is the median value and the cutoff is the 97.5th percentile of private mutation counts assigned to unique GISAID sequences. + +## 2024-11-19T14:18:53Z + +Updated tree.json to add mutation calling relative to A/American_wigeon/North_Carolina/AH0182517/2022 + +## 2024-05-08T11:39:52Z + +Initial release for Nextclade v3! + +Read more about Nextclade datasets in the documentation: https://docs.nextstrain.org/projects/nextclade/en/stable/user/datasets.html diff --git a/data_output/community/moncla-lab/iav-h5/ha/2.3.4.4/unreleased/README.md b/data_output/community/moncla-lab/iav-h5/ha/2.3.4.4/unreleased/README.md new file mode 100644 index 00000000..3b463f92 --- /dev/null +++ b/data_output/community/moncla-lab/iav-h5/ha/2.3.4.4/unreleased/README.md @@ -0,0 +1,49 @@ +# H5Nx clade `2.3.4.4` dataset with A/Astrakhan/3212/2020 reference + +| attribute | value | +| -------------------- | ---------------------------------------- | +| authors |[Jordan Ort](https://lmoncla.github.io/monclalab/team/JordanOrt/), [Louise Moncla](https://lmoncla.github.io/monclalab/team/LouiseMoncla/)| +| dataset name | H5Nx clade `2.3.4.4` (provisional) | +| reference strain | A/Astrakhan/3212/2020(H5N8) | +| reference accession | EPI1846961 | + + +## Authors and contacts + +Maintained by: [Jordan Ort](https://lmoncla.github.io/monclalab/team/JordanOrt/) + +With the help from: [Louise Moncla](https://lmoncla.github.io/monclalab/team/LouiseMoncla/), Todd Davis, Tommy Lam, Samuel Shephard, Richard Neher + +## Scope of this dataset +This dataset uses a current H5 candidate vaccine virus (CVV) from clade `2.3.4.4` (A/Astrakhan/3212/2020) as a reference and is suitable for the analysis of H5 sequences belonging to clade `2.3.4.4` and its sub-clades `2.3.4.4a` through `2.3.4.4h`. Sequences belonging to other clades cannot be annotated by this dataset and will be left `unassigned`. + +## Features +This dataset supports + + * Assignment to clades and subclades based on the provisional nomenclature defined by the WHO/FAO/WOAH H5 Nomenclature Working Group + * Sequence quality control (QC) + * Phylogenetic placement + * Annotations for glycosylation sties, HA cleavage site sequence, and presence/absence of a polybasic cleavage site + + +## Clades of H5Nx avian influenza viruses + +The WHO/FAO/WOAH H5 Nomenclature Working Group define "clades" using HA gene seguences, and define clades as genetically distinct, monophyletic groups of viruses. Viruses falling into a given clade share a common ancestor with significant bootstrap support and have low levels of within-clade diversity. [Past nomenclature updates](https://onlinelibrary.wiley.com/doi/10.1111/irv.12324) have required viruses in the same clade to be monophyletic with bootstrap suppor of at least 60%, with within-clade pairwise distances of less than 1.5%. These requirements are sometimes relaxed, and clades are periodically updated to account for expanding viral diversity. + +Since 2006, clade `2.3.4.4` viruses have circulated continuously and diversified extensively into multiple sub-clades. To account for this expansion, clade `2.3.4.4` is being split into eight additional sub-clades, named `2.3.4.4a` through `2.3.4.4h` due to high circulating diversity within the clade. + +This Nextclade dataset incorporates these provisional `2.3.4.4` sub-clades. + +## Alternative, and complementary approaches for H5 clade assignment +Two additional tools exist for assigning clades to H5 viruses that accommodate the recent `2.3.4.4` clade splits. + +1. [LABEL](https://wonder.cdc.gov/amd/flu/label/): this command-line tool is built and maintained by Sam Shepard, and performs clade assignment for all current `2.3.4.4` and `2.3.2.1` clade splits. +2. [BVBRC Subspecies Classification Tool](https://www.bv-brc.org/app/SubspeciesClassification): this is a drag and drop tool that classifies a variety of viruses, including influenza A H1N1, H3N2, and H5N1. + +The clade assignments in this Nextclade dataset were validated against LABEL assignments and shown to be generally well-matched across subclades. The figure below shows a direct comparison of assignments for 1883 HA sequences from GISAID, performed using LABEL and this NextClade dataset for clade `2.3.4.4` and its subclades. + +![Figure 1: Comparison between LABEL and Nextclade for 2.3.2.1 assignments](https://raw.githubusercontent.com/moncla-lab/h5nx-Clades/main/jordan-h5-clades/testing-nextclade-datasets/2344/files/20240430_2344.png) + +## What is Nextclade dataset + +Read more about Nextclade datasets in Nextclade documentation: https://docs.nextstrain.org/projects/nextclade/en/stable/user/datasets.html \ No newline at end of file diff --git a/data_output/community/moncla-lab/iav-h5/ha/2.3.4.4/unreleased/dataset.zip b/data_output/community/moncla-lab/iav-h5/ha/2.3.4.4/unreleased/dataset.zip new file mode 100644 index 0000000000000000000000000000000000000000..ec6049e80b59ca6efa6fbbe12f507d27b6bd66b0 GIT binary patch literal 32247312 zcmeFa-I60mmgh%l*G$$WtLeRhjtypqbVTOtO<4lGSWh4tsXnxYejk 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b/data_output/community/moncla-lab/iav-h5/ha/2.3.4.4/unreleased/example_sequences.fasta new file mode 100644 index 00000000..190c5e09 --- /dev/null +++ b/data_output/community/moncla-lab/iav-h5/ha/2.3.4.4/unreleased/example_sequences.fasta @@ -0,0 +1,580 @@ +>A/mandarinduck/Wakayama/3012A002/2020 +ATGGAGAACATAGTGCTTCTTCTTGCAATAGTTAGCCTTGTTAAAAGTGATCAAATTTGC +ATTGGTTACCATGCAAACAACTCGACAGAACAAGTCGACACGATAATGGAAAAGAACGTC +ACTGTTACACATGCCCAAGACATACTGGAAAAAGCACACAACGGGAAGCTCTGCGATTTA +AATGGGGTGAAACCTCTGGTTTTAAATGATTGTAGTGTAGCTGGATGGCTCCTCGGAAAC +CCAATGTGCGACGAATTCATCAGAGTGCCGGAATGGTCTTACATAGTAGAGAGGACTAAC +CCAGCTAATGACCTCTGTTACCCAGGGAGCCTCAATGACTATGAAGAACTAAAACACCTG +TTGAGCAGAATAAAACATTTTGAGAAGATTCTGATCATCCCCAAGAGTTCTTGGCCCAAT +CATGAAACATCATTGGGGGTGAGCGCAGCTTGTCCATACCAGGGAACGCCCTCCTTTTTC +AGAAATGTGGTATGGCTTATCAAAAAGAATGATGCATACCCAACAATAAAGATAAACTAC +AATAATACCAATCGGGAAGATCTCTTGATACTGTGGGGGATTCATCATTCCAACAATGAA +GAAGAGCAGACAAATCTATATAAAAACCCAACCACCTATATTTCAGTTGGGACATCAACG 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+GGAGGATGGCAAGGGATGGTAGATGGTTGGTATGGGTACCACCATAGCAATGAACAGGGG +AGTGGGTACGCTGCAGACAAAGAATCCACCCAAAAGGCAATAGATGGAGTTACCAATAAG +GTCAACTCGATCATTGACAAGATGAACACTCAATTTGAGGCCGTTGGAAGGGAATTTAAT +AACTTGGAACGGAGAATAGAGAATTTAAATAAGAAAATGGAAGACGGATTCCTAGATGTC +TGGACTTATAATGCTGAACTTCTAGTTCTCATGGAAAATGAGAGAACTCTAGATTTCCAT +GACTCAAATGTCAAGAACCTTTACGACAAAGTCCGACTACAGCTTAGGGATAATGCAAAG +GAGCTGGGTAATGGTTGTTTCGAGTTCTATCACAAATGTGATAATGAATGTATGGAAAGT +GTAAGAAATGGTACGTATGACTACCCTCAGTATTCAGAAGAAGCAAGATTAAAAAGAGAA +GAAATAAGCGGAGTGAAATTGGAATCAATAGGAACTTACCAAATACTGTCAATTTATTCA +ACAGTGGCGAGTTCCCTAGCACTGGCAATCATTGTGGCTGGTCTATCTTTATGGATGTGC +TCCAATGGGTCGTTACAATGCAGAATTTGCATTTAAATTTGTGAGCTCAGATTGTAGTTA +>A/duck/Vietnam/LBM1042/2017 +TTCAATCTGTCAAAATGGAGAAAATAGTGCTTCTTCTTGCAGTGATTAGCCTTGTCAAAA +GTGATCAGATTTGCATTGGTTACCATGCAAATAACTCGACAGAGCAGGTTGACACGATAA +TGGAAAAAAACGTCACTGTTACACATGCCCAGGACATACTAGAAAAGACACACAACGGGA +GGCTCTGCGATTTGAATGGAGTGAAACCTCTGATTTTAAAGGATTGTAGTGTAGCTGGAT +GGCTCCTTGGAAACCCGATGTGCGACGAGTTCATCAGAGTGCCGGAATGGTCCTACATAG +TGGAGAGGGCTAACCCGCCCCATGACCTCTGTTACCCCGGGAACCTCAACGACTATGAAG +AACTGAAACATCTATTGAGCAGAATAAATCATTTTGAGAAGACTCTGATCATTCCCAAAA +GTTCTTGGCCCAATCATGAAACATCATTAGGAGTGAGCGCTGCATGTCAATACCAGGGAA +TGCCCTCCTTTTTCAGAAATGTGGTATGGCTCATCAAGAAGAACGATGCATACCCAACAA +TAAAGATGAGCTACAATAATACCAATAGTGAAGATCTTTTGATACTGTGGGGGATTCATC +ATTCTAACAACGCAGCAGAACAAACAGATCTCTATAAAAACCCAACCACCTATGTTTCCG +TTGGGACATCAACATTAAACCAGAGATTGGTACCCAAAATAGCTACTAGATCCCAAGTAA +ACGGGCAACGTGGAAGAATGGATTTCTTCTGGACAATTTTAAACCCGAATGATGCAATCC +ACTTCGAGAGTAATGGAAATTTTATTGCTCCAGAATATGCATACAAAATTGTCAAGAAAG +GGGACTCAACAATCATGAAAAGTGAAATGGAATATGGCCATTGCAACACCAAATGTCAAA +CTCCAATAGGGGCGATAAACTCTAGTATGCCATTTCACAATATACACCCTCTCACAATCG +GGGAATGCCCCAAATACGTAAAATCAAACAAATTAGTACTTGCGACTGGGCTCAGAAATA +GTCCCCTAAGAGAGAGAAGAAGAAAAAGAGGACTATTTGGAGCTATAGCAGGATTTATAG +AGGGAGGATGGCAAGGAATGGTAGATGGTTGGTATGGGTACCACCATAGCAATGAACAGG +GAAGTGGGTACGCTGCAGACAAAGAATCCACCCAAAAGGCAATAGATGGAGTTACCAATA +AGGTCAACTCGATCATTGAAAAGATGAACACTCAATTTGAGGCCGTTGGGAGGGAATTTA +ATAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAAATGGAAGACGGATTCCTAGATG +TCTGGACCTATAATGCGGAACTTCTAGTTCTCATGGAAAATGAGAGAACCCTAGATTTCC +ATGACTCAAATGTCAAGAACCTTTATGACAAAGTCCGACTACAGCTTAGGGACAATGCAA +AGGAGCTGGGTAATGGTTGCTTTGAGTTCTATCACAAATGTGATAATGAATGTATGGAAA +GTGTAAGAAATGGGACATATAACTACCCTCAGTATTCAGAAGAAGCAAGATTGAAAAGAG +AAGAAATAAGCGGAGTGAAATTGGAATCAATAGGAACTTACCAGATACTGTCAATTTATT +CAACAGTGGCGAGTTCCCTAGCACTGGCAATCATTGTGGCTGGTCTATCTTTATGGATGT +GTTCCAATGGGTCGTTACAATGCAGAATTTGCATCTGATTTTATGAGCTCAGATTGTAGT +TA +>A/duck/Vietnam/LBM632/2014 +TTCAATCTGTCAAAATGGAGAAAATAGTGCTTCTTCTTGCAGTGGTTAGCCTTGTTAAAA +GTGATCAGATTTGCATTGGTTACCATGCAAATAACTCGACAGAGCAGGTTGACACGATAA +TGGAAAAAAACGTCACTGTTACACATGCCCAAGACATACTGGAAAAGACACACAACGGGA +GGCTCTGCGATCTGAATGGAGTGAAACCTCTGATTTTAAGGGATTGTAGTGTAGCTGGAT +GGCTCCTTGGAAACCCAATGTGCGACGAGTTCATCAGAGTGCCGGAATGGTCTTACATAG +TGGAGAGGGCTAACCCATCCAATGACCTCTGTTACCCGGGGAACCTCAATGACTATGAAG +AACTGAAACACCTATTAAGCAGAATAAATCATTTTGAGAAGACTCTGATCATCCCCAAGA +GTTCTTGGCCCGATCATGAAACATCATTAGGGGTGAGCGCAGCATGTCCATACCAGGGAA +TGCCCTCCTTTTTCAGAAATGTGGTATGGCTTATCAAGAAGAACGATACATACCCAACAA +TAAAGATAAGCTACAATAATACCAATAGGGAAGATCTTTTGATACTGTGGGGGATTCATC +ATTCCAACAACGCAGCAGAGCAGACAGAGCTCTATAAAAACCCAAACACCTATGTTTCCG +TTGGGACATCAACATTAAACCAGAGATTGGTGCCCAAAATAGCTACTAGATCCCAAGTAA +ACGGGCAACGTGGAAGAATGGATTTCTTCTGGACAATTTTAAAACCGAATGATGCAATCC +ACTTCGAGAGTAATGGAAATTTTATTGCTCCAGAGTATGCATACAAAATTGTCAAGAAAG +GGGACTCAACAATCATGAAAAGTGAAATGGAATATGGCCACTGCAACACCAAATGTCAAA +CTCCAATAGGGGCGATAAACTCTAGTATGCCATTCCACAATATACACCCTCTCACTATCG +GGGAATGCCCCAAATACGTGAAATCAAACAAATTAGTCCTTGCGACTGGGCTCAGAAATA +ATCCTCTAAGAGAGAGGAGAAGAAAAAGAGGACTATTTGGAGCTATAGCAGGGTTTATAG +AGGGAGGATGGCAAGGGATGGTAGATGGTTGGTATGGGTACCACCATAGCAATGAACAGG +GGAGTGGGTACGCTGCAGACAAAGAATCCACCCAAAAGGCAATAGATGGAGTTACCAATA +AGGTCAACTCGATCATTGACAAGATGAACACTCAATTTGAGGCCGTTGGAAGGGAATTTA +ATAACTTGGAACGGAGAATAGAGAATTTAAATAAGAAAATGGAAGACGGATTCCTAGATG +TCTGGACTTATAATGCTGAACTTCTAGTTCTCATGGAAAATGAGAGAACTCTAGATTTCC +ATGACTCAAATGTCAAGAACCTTTACGACAAAGTCCGACTACAGCTTAGGGATAATGCAA +AGGAGCTGGGTAATGGTTGTTTCGAGTTCTATCACAAATGTGATAATGAATGTATGGAAA +GTGTAAGAAATGGTACGTATGACTACCCTCAGTATTCAGAAGAAGCAAGATTAAAAAGAG +AAGAAATAAGCGGAGTGAAATTGGAATCAATAGGAACTTACCAAATACTGTCAATTTATT +CAACAGTGGCGAGTTCCCTAGCACTGGCAATCATTGTGGCTGGTCTATCTTTATGGATGT +GCTCCAATGGGTCGTTACAATGCAGAATTTGCATTTAAATTTGTGAGCTCAGATTGTAGT +TA +>A/duck/Vietnam/LBM806/2015 +TTCAATCTGTCAAAATGGAGAAAATAGTGCTTCTTCTTGCAGTGGTTAGCCTTGTTAAAA +GTGATCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACACGATAA +TGGAAAAAAACGTCACTGTTACACATGCCCAAGACATACTGGAAAAGACACACAACGGGA +GGCTCTGCGATCTGAATGGAGTGAAACCTCTGATTTTAAAGGATTGTAGTGTAGCTGGAT +GGCTTCTTGGAAACCCAATGTGCGACGAGTTCATCAGAGTGCCGGAATGGTCCTACATAG +TGGAAAGGGCTAACCCAGCCAATGACCTCTGTTACCCAGGGAATCTCAATGACTATGAAG +AACTGAAACACTTATTGAGCAGAATAAATCATTTTGAGAAGACTCTGATCATCCCCAAGA +GTTCTTGGCCCAATCATGAAACATCATTAGGGGTGAGCGCAGCTTGTTCATACCAGGGAA +TGCCCTCCTTTTTCAGAAATGTGGTATGGCTTACCAAGAAGAACGATGCATACCCAACAA +TAAAGATGAGCTACAATAATACCAATAGGGAAGATCTTTTGATACTGTGGGGGATTCATC +ATCCCAACAATGAAGCAGAGCAAAAAAGTATCTATAAAAATCCAACCACCTATGTTTCCG +TTGGGACATCAACATTAAACCAGAGATTGGTGCCAAAAATAGCTACTAGATCCCAAGTAA +ACGGGCAACGTGGAAGAATGGATTTCTTCTGGACAATTTTAAAACCGAATGATGCAATCC +ACTTCGAGAGTAATGGAAATTTTATTGCTCCAGAATATGCATACAAAATTGTCAAGAAAG +GGGACTCAACAATTATGAAAAGTGAAATGGAATACGGCTACTGCAACACCAAATGTCAAA +CTCCAATAGGGGCGATAAACTCTAGTATGCCATTCCACAATATACACCCTCTCACTATCG +GGGAGTGCCCCAAATACGTGAAATCAAACAAATTAGTCCTTGCGACTGGGCTCAGAAATA +CTCCTCTAAGAGAAAGAAGAAGAAAAAGAGGACTATTTGGAGCTATAGCAGGTTTTATAG +AGGGAGGATGGCAAGGAATGGTAGATGGTTGGTATGGGTACCACCATAGCAATGAACAGG +GGAGTGGGTACGCTGCAGACAGAGAATCCACCCAAAAGGCAATAGATGGAGTTACCAATA +AGGTCAACTCGATCATTGACAAAATGAACACTCAATTTGAGGCCGTTGGAAGGGAATTCA +ATAACTTAGAACGGAGAATAGAGAATTTAAATAAGAAAATGGAAGACGGATTCCTAGATG +TCTGGACTTATAATGCTGAACTTTTAGTTCTCATGGAAAATGAGAGAACTCTAGATTTCC +ATGACTCAAATGTCAAGAACCTTTATGACAAAGTCCGACTACAGCTTAGGGATAATGCAA +AGGAGCTGGGTAATGGTTGTTTCGAGTTCTATCACAAATGTGATAATGAATGTATGGAAA +GTGTAAGAAATGGGACGTACGACTACCCCCAATATTCAGAAGAAGCAAGATTAAAAAGGG +AAGAAATAAGCGGAGTGAAACTGGAATCAATAGGAACTTACCAAATACTGTCAATTTATT +CAACAGTGGCGAGTTCCCTAACACTGGCAATCATCGTGGCTGGTCTATCTTTATGGATGT +GCTCCAATGGGTCGTTGCAATGCAGAATTTGCATTTAA +>A/chicken/NhaTrang/122/2015 +GTCAAAATGGAGAAAATAGTGCTTCTTCTTGCATTGGTTAGCCTTGTTAAAAGTGATCAG +ATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACACAATAATGGAAAAA +AACGTCACTGTTACACATGCCCAAGACATACTGGAAAAGACACACAACGGGAGGCTCTGC +GATCTGAATGGAGTGAAACCTCTGATTTTAAAGGATTGTAGTGTAGCTGGATGGCTTCTT +GGAAACCCAATGTGCGACGAGTTCATCAGAGTGCCGGAATGGTCTTACATAGTGGAGAGG +GCTAACCCAGCCAATGACCTCTGTTACCCAGGGAATCTCAATGACTATGAAGAACTGAAA +CACTTATTGAGCAGAATAAATCATTTTGAGAAGACTCTGATCATCCCCAAGAGTTCTTGG +CCCAATCATGAAACATCATTGGGGGTGAGCGCAGCATGTCCATACCAGGGAATGCCCTCC +TTTTTCAGAAATGTGGTATGGCTTACCAAGAAGAACGATGCATACCCAACAATAAAGGTG +AGCTATAATAATACCAATAGGGAAGATCTTTTGATATTGTGGGGGATTCATCATTCCAAC +AATGCAGCAGAGCAGACAAATCTCTATAAAAACCCAGCCACCTATGTTTCCGTTGGGACA +TCAACATTAAACCAGAGATTGGTGCCCAAAATAGCTACTAGATCCCAAGTAAACGGGCAA +CGTGGAAGAATGGATTTCTTCTGGACAATTTTAAAACCGAATGATGCAATCCACTTCGAG +AGTAATGGAAATTTTATTGCTCCAGAATATGCATACAAAATTGTCAAGAAAGGGGACTCA +ACAATTATGAAAAGTGAAATGGAATACGGCCACTGCAACACCAAATGTCAAACTCCAATA +GGGGCGATAAACTCTAGTATGCCATTCCACAATATACACCCTCTCACTATCGGGGAGTGC +CCCAAATACGTGAAATCAAACAAATTAGTCCTTGCGACTGGGCTCAGAAATAGTCCTCTA +AGAGAAAGAAGAAGAAAAAGAGGGCTATTTGGAGCTATAGCAGGTTTTATAGAGGGAGGC +TGGCAGGGAATGGTAGATGGTTGGTATGGGTACCACCATAGCAATGAACAGGGGAGTGGG +TACGCTGCAGACAGAGAATCCACCCAAAAGGCAATAGATGGAGTTACCAATAAGGTCAAC +TCGATCATTGACAAAATGAACACTCAATTTGAGGCCGTTGGAAGGGAATTTAATAACTTA +GAACGGAGAATAGAGAATTTAAATAAGAAAATGGAAGACGGATTCCTAGATGTCTGGACT +TATAATGCTGAACTTTTAGTTCTCATGGAAAATGAAAGAACTCTAGATTTCCATGACTCA +AATGTCAAGAACCTTTATGACAAAGTCCGACTACAGCTTAGGGATAATGCAAAGGAGCTG +GGTAATGGTTGTTTCGAGTTCTATCACAAATGTGATAATGAATGTATGGAAAGTGTAAGA +AATGGGACGTATGACTACCCCCAATATTCAGAAGAAGCAAGATTAAAAAGGGAAGAAATA +AGCGGAGTGAAACTGGAATCAATAGGAACTTACCAAATACTGTCAATTTATTCAACAGTG +GCAAGTTCCCTAACACTGGCAATCATTGTGGCTGGTCTATCTTTATGGATGTGCTCCAAT +GGGTCGTTACAATGCAGAATTTGCATTTAAATTTGTGAGCTCAAATTATAATTA +>A/muscovyduck/Vietnam/LBM809/2015 +TTCAATCTGTCAAAATGGAGAAAATAGTGCTTCTTCTTGCAGTGGTTAGCCTTGTTAAAA +GTGATCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACACAATAA +TGGAAAAAAACGTCACTGTTACACATGCCCAAGACATACTGGAAAAGACACACAACGGGA +GGCTCTGCGATCTGAATGGAGTGAAACCTCTGATTTTAAAGGATTGTAGTGTAGCTGGAT +GGCTTCTTGGAAACCCAATGTGCGACGAGTTCATCAGAGTGCCGGAATGGTCTTACATAG +TGGAAAGGGCTAACCCAGCCAATGACCTCTGTTACCCAGGGAATCTCAATGACTATGAAG +AACTGAAACACTTATTGAGCAGAATAAATCATTTTGAGAAGACTCTGATCATCCCCAAGA +GTTCTTGGCCCAATCATGAAACATCATTAGGGGTGAGCGCAGCTTGTCCATACCAGGGAA +TGCCCTCCTTTTTCAGAAATGTGGTATGGCTTACCAAGAAGAACGATGCATACCCAACAA +TAAAGATGAGCTACAATAATACCAATAGGGAAGATCTTTTGATACTGTGGGGGATTCATC +ATCCCAACAATGAAGCAGAGCAAACAAGTATCTATAAAAATCCAACCACCTATGTTTCCG +TTGGGACATCAACATTAAACCAGAGATTGGTGCCAAAAATAGCTACTAGATCCCAAGTAA +ACGGGCAACGTGGAAGAATGGATTTCTTCTGGACAATTTTAAAACCGAATGATGCAATCC +ACTTCGAGAGTAATGGAAATTTTATTGCTCCAGAATATGCATACAAAATTGTCAAGAAAG +GGGACTCAACAATTATGAAAAGTGAAATGGAATACGGCTACTGTAACACCAAATGTCAAA +CTCCAATAGGGGCGATAAACTCTAGTATGCCATTCCACAATATACACCCTCTCACTATCG +GGGAGTGCCCCAAATACGTGAAATCAAACAAATTAGTCCTTGCGACTGGGCTCAGAAATA +GTCCTCTAAGAGAAAGAAGAAGAAAGAGAGGACTATTTGGAGCTATAGCAGGTTTTATAG +AAGGAGGATGGCAAGGAATGGTAGATGGTTGGTATGGGTACCACCATAGCAATGAACAGG +GGAGTGGGTACGCTGCAGACAAAGAATCCACCCAAAAGGCAATAGATGGAGTTACCAATA +AGGTCAACTCGATCATTGACAAAATGAACACTCAATTTGAGGCCGTTGGAAGGGAATTCA +ATAACTTAGAACGGAGAATAGAGAATTTAAATAAGAAAATGGAAGACGGATTCCTAGATG +TCTGGACTTATAATGCTGAACTTTTAGTTCTCATGGAAAATGAGAGAACTCTAGATTTCC +ATGACTCAAATGTCAAGAACCTTTATGACAAAGTCCGACTACAGCTTAGGGATAATGCAA +AGGAACTGGGTAATGGTTGTTTCGAGTTCTATCACAAATGTGATAATGAATGTATGGAAA +GTGTAAGAAATGGGACGTACGACTACCCCCAATATTCAGAAGAAGCAAGATTAAAAAGGG +AAGAAATAAGCGGAGTGAAACTGGAATCAATAGGAACTTACCAAATACTGTCAATTTATT +CAACAGTGGCGAGTTCCCTAACACTGGCAATCATCGTGGCTGGTCTATCTTTATGGATGT +GCTCCAATGGGTCGTTACAATGCAGAATTTGCATTTAA +>A/muscovyduck/Vietnam/LBM1101/2018 +TTCAGTCTGTCAAAATGGAGAAAATAGTACTTCTTCTTTCAATGGTTGGCCTTGTTAAAA +GTGATCAGATTTGCATTGGTTACCATGCAAACAACTCAACAGAGCAGGTTGACACAATAA +TGGAAAAAAACGTCACTGTTACGCACGCCCAAGACATACTGGAAAAGACACACAACGGGA +AGCTCTGCGATCTGAATGGAGTGAAACCTCTGATTTTAAAGAATTGTAGTGTAGCTGGAT +GGCTTCTTGGAAACCCAATGTGCGACGAGTTCACCAGCGTACCGGAATGGTCTTACATAG +TGGAGAGGGCTAACCCAGCCAATGACCTCTGTTACCCAGGGAACCTCAATGACTATGAAG +AACTGAAACACCTATTGAGCAGAATAAATCATTTTGAGAAGACTCAGATCATCCCCAAGA +GGTCTTGGTCCAATCATACATCATCAGGAGTGAGCGCAGCATGTCCATACACAGGGGTGG +CCTCCTTTTTTAGAAATGTGGTATGGCTTACCAAGAAGAATGATGCATACCCAACAATAA +AGAAGAGCTACAATAATACCAACAAAGAAAATCTTTTGATACTGTGGGGAATCCATCATT +CCAACAGTGCAGAGGAGCAGGCAGATCTCTACAAGAACCCAACCACCTATGTTTCCGTTG +GGACATCAACACTAAACCAGAGGTTGGTGCCAAAAATAGCTACTAGATCCCAAGTAAATG +GGCAACGTGGAAGAATGGATTTCTTCTGGACAATCTTAAGACCGAATGATGCAATCCACT +TCGAGAGTAATGGAAATTTTATCGCTCCAGAATATGCATACAAAATTATCAAGACAGGAG +ACTCAACAATTATGAAAAGTGAAATAGAATATGGCAACTGCAACACCAAATGTCAAACTC +CAATAGGGGCGATAAACTCTAGTATGCCATTCCACAATATACATCCTCTCACTATCGGGG +AGTGCCCCAAATATGTGAAATCAAACAAATTAGTCCTTGCGACTGGGCTCAGAAATAGTC +CTCTAAGAGAAAGAAGAAGAAAAAGAGGACTGTTTGGAGCTATAGCAGGGTTTATAGAGG +GAGGATGGCAAGGAATGGTAGATGGTTGGTATGGGTACCACCATAGTAATGAACAGGGGA +GTGGGTACGCTGCAGACAGAGAATCCACCCAAAAGGCAATAGATGGAGTCACCAACAAGG +TCAACTCGATAATTGACAAAATGAACACTCAATTTGAGGCCGTTGGAAGAGAATTTAATA +GCTTAGAACGGAGAATAGAGAATTTAAATAAGAAAATGGAAGACGGATTCCTAGATGTCT +GGACTTATAATGCTGAACTTTTAGTTCTCATGGAAAATGAGAGAACTCTAGATTTCCATG +ACTCAAATGTCAAGAACCTTTATGACAAAGTCCGACTACAGCTTAGGGATAATGCAAAGG +AGCTGGGTAATGGTTGTTTCGAGTTCTATCACAAATGTGATAATGAATGTATGGAAAGTG +TGAGAAATGGAACGTACGACTACCCCCAGTACTCAGAAGAAGCAAGATTAAAAAGGGAAG +AAATAAGCGGAGTGAAATTGGAATCAATAGGAACTTATCAAATACTGTCAATTTATTCAA +CAGTGGCGAGTTCCCTAGTACTGGCAATCATTGTGGCTGGTCTATCTTTATGGATGTGCT +CCAATGGGTCATTACAATGCAGAATTTGCATTTAAATTTGTGAGCTCAAATTGTAATTA +>A/duck/NhaTrang/301/2018 +TTCAGTCTGTCAAAATGGAGAAAATAGTACTTCTTCTTTCAATGGTTGGCCTTGTTAAAA +GTGATCAGATTTGTATTGGTTACCATGCAAACAACTCAACAGAGCAGGTTGACACAATAA +TGGAAAAAAACGTCACTGTTACGCATGCCCAAGACATACTGGAAAAGACACACAACGGGA +AGCTCTGCGATCTGAATGGAGTGAAACCTCTGATTTTAAAGAATTGTAGTGTAGCTGGAT +GGCTTCTTGGAAACCCAATGTGCGACGAGTTCATCAGCGTACCGGAATGGTCTTACATAG +TGGAGAGGGCTAACCCAGCCAATGACCTCTGTTACCCAGGGAACCTCAATGACTATGAAG +AACTGAAACACCTATTGAGCAGAATAAATCATTTTGAGAAGACTCAGATCATCCCCAAGA +GGTATTGGTCCAATCATACATCATCAGGAGTGAGCGCAGCATGTCCATACACAGGGGTGG +CCTCCTTTTTTAGAAATGTGGTATGGCTTACCAAGAAGAATGATGCATACCCAACAATAA +AGAAGAGCTACAATAATACCAACAAAGAAGATCTTTTGATACTGTGGGGAATCCATCATT +CCAACAGTGCAGAGGAGCAGGCAGATCTCTACAAGAACCCAACCACCTATGTTTCCGTTG +GGACATCAACACTAAACCAGAGGTTGGTGCCAAAAATAGCTACTAGATCCCAAGTAAATG +GGCAACGTGGAAGAATGGATTTCTTCTGGACAATCTTAAGACCGAATGATGCAATCCACT +TCGAGAGTAATGGGAATTTTATCGCTCCAGAATATGCATACAAAATTATCAAGACAGGAG +ACTCAACAATTATGAAAAGTGAAATAGAATATGGCAACTGCAACACCAAGTGTCAAACTC +CAATAGGGGCGATAAACTCTAGTATGCCATTCCACAATATACATCCTCTCACTATCGGGG +AGTGCCCCAAGTATGTGAAATCAAACAAATTAGTCCTTGCGACTGGGCTCAGAAATAGTC +CTCTAAGAGAAAGAAGAAGAAAAAGAGGACTGTTTGGAGCTATAGCAGGGTTTATAGAGG +GAGGATGGCAAGGAATGGTAGATGGTTGGTATGGGTACCACCATAGTAATGAACAGGGGA +GTGGGTACGCTGCAGACAGAGAATCCACCCAAAAGGCAATAGATGGAGTCACCAACAAGG +TCAACTCGATAATTGACAAAATGAACACTCAATTTGAGGCCGTTGGAAGAGAATTTAATA +GCTTAGAACGGAGAATAGAGAATTTAAATAAGAAAATGGAAGACGGATTCCTAGATGTCT +GGACTTATAATGCTGAACTTTTAGTTCTCATGGAAAATGAGAGAACTCTAGATTTCCATG +ACTCAAATGTCAAGAACCTTTATGACAAAGTCCGACTACAGCTTAGGGATAATGCAAAGG +AGCTGGGTAATGGTTGTTTCGAGTTCTATCACAAATGTGATAATGAATGTATGGAAAGTG +TGAGAAATGGAACGTACGACTACCCCCAGTACTCAGAAGAAGCAAGATTAAAAAGGGAAG +AAATAAGCGGAGTGAAATTGGAATCAATAGGAACTTACCAAATACTGTCAATTTATTCAA +CAGTGGCGAGTTCCCTAGTACTGGCAATCATTGTGGCTGGTCTATCTTTATGGATGTGCT +CCAATGGGTCGTTACAATGCAGAATTTGCATTTAAATTTGTGAGCTCAAATTGTAATTA +>A/muteswan/Hyogo/2801ITM005/2017 +GCAGGGGTTCAATCTGTCAAAATGGAGAAAATAGTGCTTCTTCTTGCAGTGGTTAGCCTT +GTTAAAGGTGATCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGAC +ACGATAATGGAAAAAAACGTCACTGTTACACATGCCCAAGACATACTGGAAAAGACACAC +AACGGGAGGCTCTGCGATCTGAATGGAGTGAAACCTCTGATTTTAAAGGATTGTAGTGTA +GCTGGATGGCTTCTTGGAAACCCAATGTGCGACGAATTCATCAGAGTGCCGGAATGGTCT +TACATAGTGGAGAGGACTAACCCAGTCAATGACCTCTGTTACCCAGGGAACCTCAATGAC +TATGAAGAACTGAAACACCTATTGAGCAGAATAAATCATTTTGAGAAGACTCTGATCATT +CCCAAGAGTTCTTGGCCCAATCATGAAACATCAGGGGTGAGCTCAGCATGCCCATATCAG +GGAGTGCCCTCCTTTTTCAGAAATGTGGTATGGCTTACCAAGAAGAACGATGCATACCCA +ACAATAAAGATGAGCTACAATAATACCAATGGGGAAGATCTTTTGATACTGTGGGGGATT +CATCATTCCAACAATGCAGCAGAGCAGACAAATCTCTATAAAAACCCAACCACCTATATT +TCCGTTGGGACATCAACATTAAACCAGAGGTTGGTGCCAAAAATAGCTACTAGATCCCAA +GTAAACGGGCAACAAGGGAGAATGGATTTCTTCTGGACAATTTTAAAACCGAATGATGCA +ATCCACTTTGAGAGTAATGGAAATTTTATTGCTCCAGAATATGCATACAAAATAGTCAAG +AAAGGGGACTCAACAATTATGAAAAGTGAAATGGAATATGGCCACTGCAACACCAAATGT +CAAACTCCAATAGGGGCGATAAACTCTAGTATGCCATTCCACAATATACACCCTCTCACC +ATTGGGGAGTGCCCCAAATACGTGAAATCAAACAAATTAGTCCTTGCGACTGGACTCAGA +AATAGTCCTTCAAGAGAAAGAAGAAGAAAAAGAGGACTATTTGGAGCTATAGCAGGGTTC +ATAGAAGGAGGATGGCAAGGAATGGTAGATGGTTGGTATGGGTACCACCATAGCAATGAA +CAGGGGAGTGGGTACGCTGCAGACAGAGAATCCACCCAAAAGGCAATAGATGGAGTTACC +AATAAGGTCAACTCGATAATCGACAAAATGAACACTCAATTTGAGGCCGTTGGAAGGGAG +TTTAATAACTTAGAACGGAGAATAGAGAATTTAAATAAGAAAATGGAAGACGGATTCCTA +GATGTCTGGACTTACAATGCTGAACTTTTAGTTCTCATGGAAAATGAGAGAACTTTAGAT +TTTCACGATTCAAATGTAAAAAACCTTTATGACAAAGTCCGACTACAGCTTAGGGATAAT +GCAAAGGAACTAGGTAATGGTTGTTTCGAGTTCTATCATAAATGTGATAATGAATGTATG +GAAAGTGTGAGAAATGGGACGTATGACTATCCCCAGTATTCAGAAGAAGCAAGATTAAAA +AGGGAAGAAATAAGCGGAGTGAAATTGGAATCAATAGGAACTTACCAAATACTGTCAATT +TATTCAACAGTGGCGAGTTCCCTAGCACTGGCAATCATTGTGGCTGGTCTATCTTTATGG +ATGTGCTCCAATGGGTCGTTACAATGCAGAATTTGCATTTAAATTTGTGAGCTCAAATTG +CAATTAAAAACACCCTTG +>A/muteswan/Hyogo/2801ITM008/2017 +GCAGGGGTTCAATCTGTCAAAATGGAGAAAATAGTGCTTCTTCTTGCAGTGGTTAGCCTT +GTTAAAGGTGATCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGAC +ACGATAATGGAAAAAAACGTCACTGTTACACATGCCCAAGACATACTGGAAAAGACACAC +AACGGGAGGCTCTGCGATCTGAATGGAGTGAAACCTCTGATTTTAAAGGATTGTAGTGTA +GCTGGATGGCTTCTTGGAAACCCAATGTGCGACGAATTCATCAGAGTGCCGGAATGGTCT +TACATAGTGGAGAGGACTAACCCAGTCAATGACCTCTGTTACCCAGGGAACCTCAATGAC +TATGAAGAACTGAAACACCTATTGAGCAGAATAAATCATTTTGAGAAGACTCTGATCATT +CCCAAGAGTTCTTGGCCCAATCATGAAACATCAGGGGTGAGCTCAGCATGCCCATATCAG +GGAGTGCCCTCCTTTTTCAGAAATGTGGTATGGCTTACCAAGAAGAACGATGCATACCCA +ACAATAAAGATGAGCTACAATAATACCAATGGGGAAGATCTTTTGATACTGTGGGGGATT +CATCATTCCAACAATGCAGCAGAGCAGACAAATCTCTATAAAAACCCAACCACCTATATT +TCCGTTGGGACATCAACATTAAACCAGAGGTTGGTGCCAAAAATAGCTACTAGATCCCAA +GTAAACGGGCAACAAGGGAGAATGGATTTCTTCTGGACAATTTTAAAACCGAATGATGCA +ATCCACTTTGAGAGTAATGGAAATTTTATTGCTCCAGAATATGCATACAAAATAGTCAAG +AAAGGGGACTCAACAATTATGAAAAGTGAAATGGAATATGGCCACTGCAACACCAAATGT +CAAACTCCAATAGGGGCGATAAACTCTAGTATGCCATTCCACAATATACACCCTCTCACC +ATTGGGGAGTGCCCCAAATACGTGAAATCAAACAAATTAGTCCTTGCGACTGGACTCAGA +AATAGTCCTTCAAGAGAAAGAAGAAGAAAAAGAGGACTATTTGGAGCTATAGCAGGGTTC +ATAGAAGGAGGATGGCAAGGAATGGTAGATGGTTGGTATGGGTACCACCATAGCAATGAA +CAGGGGAGTGGGTACGCTGCAGACAGAGAATCCACCCAAAAGGCAATAGATGGAGTTACC +AATAAGGTCAACTCGATAATCGACAAAATGAACACTCAATTTGAGGCCGTTGGAAGGGAG +TTTAATAACTTAGAACGGAGAATAGAGAATTTAAATAAGAAAATGGAAGACGGATTCCTA +GATGTCTGGACTTACAATGCTGAACTTTTAGTTCTCATGGAAAATGAGAGAACTTTAGAT +TTTCACGATTCAAATGTAAAAAACCTTTATGACAAAGTCCGACTACAGCTTAGGGATAAT +GCAAAGGAACTAGGTAATGGTTGTTTCGAGTTCTATCATAAATGTGATAATGAATGTATG +GAAAGTGTGAGAAATGGGACGTATGACTATCCCCAGTATTCAGAAGAAGCAAGATTAAAA +AGGGAAGAAATAAGCGGAGTGAAATTGGAATCAATAGGAACTTACCAAATACTGTCAATT +TATTCAACAGTGGCGAGTTCCCTAGCACTGGCAATCATTGTGGCTGGTCTATCTTTATGG +ATGTGCTCCAATGGGTCGTTACAATGCAGAATTTGCATTTAAATTTGTGAGCTCAAATTG +CAATTAAAAACACCCTTG +>A/duck/Vietnam/LBM759/2014 +GCAGGGGTTCAATCTGTCAAAATGGAGAAAATAGTGCTTCTTCTTGCAGTGGTTAGCCTT +GTTAAAAGTGATCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGAC +ACGATAATGGAAAAGAACGTCACTGTTACACATGCCCAAGACATACTGGAAAAGACACAC +AACGGGAGGCTCTGCGATCTGAATGGGGTGAAACCTCTGATTTTAAAGGATTGTAGTGTA +GCTGGATGGCTTCTTGGAAACCCAATGTGCGACGAGTTCATCAGAGTGCCGGAATGGTCT +TACATAGTGGAGAGGGCTAACCCAGCCAATGACCTCTGTTACCCAGGGAACCTCAATGAC +TATGAAGAACTGAAACACCTATTGAGCAGAATAAATCATTTTGAGAAGACTCTGATCATC +CCCAAGAGTTCTTGGCCCAATCATGAAACATCATTAGGGGTGAGCGCAGCATGTCCATAC +CAGGGAATGCCCTCCTTTTTCAGAAATGTGGTATGGCTTACCAAGAAGAACGATGCATAC +CCAACAATAAAGATGAGCTACAATAATACCAATAGGGAAGATCTTTTGATACTGTGGGGG +ATTCATCATTCCAACAATGCAGCAGAGCAGACAAATCTCTATAAAAACCCAACCACCTAT +GTTTCCGTTGGGACATCAACATTAAACCAGAGATTGGTGCCAAAAATAGCTACTAGATCC +CAAGTAAACGGGCAACGTGGAAGAATGGATTTCTTCTGGACAATTTTAAAACCGGATGAT +GCAATCCACTTCGAGAGTAATGGAAATTTTATTGCTCCAGAATATGCATACAAAATTGTC +AAGAAAGGGGACTCAACAATTATGAAAAGTGAAATGGAATATGGCCACTGCAACACCAAA +TGTCAAACTCCAATAGGGGCGATAAACTCTAGTATGCCATTCCACAATATACACCCTCTC +ACTATCGGGGAGTGCCCCAAATACGTGAAATCAAACAAATTAGTCCTTGCGACTGGGCTC +AGAAATAGTCCTCTAAGAGAAAGAAGAAGAAAAAGAGGACTATTTGGAGCTATAGCAGGG +TTCATAGAGGGAGGATGGCAAGGAATGGTAGATGGTTGGTATGGGTACCACCATAGCAAT +GAACAGGGGAGTGGGTACGCTGCAGACAGAGAATCCACCCAAAAGGCAATAGATGGAGTT +ACCAATAAGGTCAACTCGATAATTGACAAAATGAACACTCAATTTGAGGCCGTTGGAAGG +GAGTTTAATAAATTAGAACGGAGAATAGAGAATTTAAATAAGAAAATGGAAGACGGATTC +CTAGATGTCTGGACTTACAATGCTGAACTTTTAGTTCTCATGGAAAATGAGAGAACTCTA +GATTTCCATGATTCAAATGTCAAGAACCTTTATGACAAAGTCCGACTACAGCTTAGGGAT +AATGCAAAGGAGCTGGGTAATGGTTGTTTCGAGTTCTATCACAAATGTGATAATGAATGT +ATGGAAAGTGTAAGAAATGGGACGTATGACTACCCCCAGTATTCAGAAGAATCAAGATTA +AAGAGGGAAGAAATAAGCGGAGTGAAATTGGAATCAATAGGAACTTACCAAATACTGTCA +ATTTATTCAACGGTGGCGAGTTCCCTAGCACTGGCAATCATTGTGGCTGGTCTATCTTTA +TGGATGTGCTCCAATGGGTCGTTACAATGCAGAATTTGCATTTAAATTTGTGAGCTCAAA +TTGTAATTAAAAAC +>A/muscovyduck/QuangNinh/4c111/2013 +TTTAATCTGTCAAAATGGAGAAAATAGTGCTTCTTCTTGCAATAGTTAGCCTTGTTAAAG +GTGATCAGATTTGCATTGGTTACCATGCAAACAACTCGACGGAGCAGGTTGACACGATAA +TGGAAAAGAACGTCACTGTTACACATGCCCAAGACATACTAGAAAAGACACACAATGGAA +AGCTCTGCGATTTAAATGGAGTGAAGCCTCTGATTTTGAAGGATTGTAGTGTGGCTGGAT +GGCTTCTCGGAAACCCAATGTGCGACGAATTCATCAGGGTGCCGGAATGGTCTTACATAG +TAGAAAGGGCTAACCCAGCCAATGACCTCTGTTACCCAGGGAACCTCAATGATTATGAAG +AACTGAAACACCTATTGAGCAGAATAAATCATTTTGAGAAAATTCTGATCATCCCCAAGA +GTTCTTGGACCAATCATGAAACATCATTAGGGGTGAGCGCAGCATGCCCATACCAGGGAA +CGCCCTCATTTTTCAGAAATGTGGTATGGCTTATCAAAAAGAACGATGCATACCCCACAA +TAAAAATAAGCTACAATAATACCAATCAGGAAGATCTGTTGATACTGTGGGGGATTCACC +ATTCCAACAATGCAGCAGAGCAGACGAACCTCTATAAAAACCCAACCACCTATATTTCCG +TTGGGACATCAACATTAAACCAGAGATTGGTACCAAAAATAGCTACTAGATCCCAAGTGA +ATGGACAGCGGGGAAGAATGGATTTCTTCTGGACAATTCTAAAACCGAATGATGCAATCC +ATTTCGAGAGTAATGGAAATTTCATTGCTCCAGAATATGCATACAAAATTGTCAAGAAAG +GGGACTCAACAATTATGAAAAGTGAAGTGGAATATGGCCACTGCAACACCAAATGTCAAA +CTCCAATAGGGGCGATAAACTCTAGTATGCCATTTCACAATATACACCCTCTCACCATCG +GGGAATGCCCCAAATACGTGAAATCAAACAAATTAGTCCTTGCGACTGGGCTCAGAAATA +ATCCTCTAAGAGAAAAGAGAAGAAAAAGAGGACTATTTGGAGCTATAGCCGGGTTTATAG +AGGGAGGATGGCAGGGAATGGTAGATGGCTGGTATGGGTACCATCATAGCAATGAGCAGG +GGAGTGGGTACGCTGCAGACAAAGAATCCACCCAAAAGGCTATAGATGGAGTTACCAATA +AGGTCAACTCGATTATTGACAAAATGAACACTCAATTTGAGGCCGTTGGAAGGGAATTTA +ATAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAAATGGAAGACGGATTCCTAGATG +TCTGGACTTATAATGCTGAACTTCTAGTTCTCATGGAAAATGAGAGAACTCTAGATTTCC +ATGACTCAAATGTCAAGAACCTTTACGATAAAGTCCGACTACAGCTTAAGGACAATGCAA +AGGAGCTGGGTAATGGTTGTTTTGAGTTCTATCACAAATGTGATAATGAATGTATGGAAA +GTGTAAGAAATGGGACATATGACTACCCGCAATATTCAGAAGAAGCAAGATTAAAAAGAG +AAGAAATAAGCGGAGTGAAATTAGAGTCAATAGGAACTTACCAAATACTGTCAATTTATT +CAACAGTGGCGAGTTCCCTAGCGCTGGCAATCATAGTGGCTGGTTTATCTTTATGGATGT +GCTCCAATGGGTCGTTGCAGTGCAGAATTTGCATTTAAATTTGTGAGCTCAGATTGTAGT +T +>A/muscovyduck/QuangNinh/5c112/2013 +TTTAATCTGTCAAAATGGAGAAAATAGTGCTTCTTCTTGCAATAGTTAGCCTTGTTAAAG +GTGATCAGATTTGCATTGGTTACCATGCAAACAACTCGACGGAGCAGGTTGACACGATAA +TGGAAAAGAACGTCACTGTTACACATGCCCAAGACATACTAGAAAAGACACACAATGGAA +AGCTCTGCGATTTAAATGGAGTGAAGCCTCTGATTTTGAAGGATTGTAGTGTGGCTGGAT +GGCTTCTCGGAAACCCAATGTGCGACGAATTCATCAGGGTGCCGGAATGGTCTTACATAG +TAGAAAGGGCTAACCCAGCCAATGACCTCTGCTACCCAGGGAACCTCAATGATTATGAAG +AACTGAAACACCTATTGAGCAGAATAAATCATTTTGAGAAAATTCTGATCATCCCCAAGA +GTTCTTGGACCAATCATGAAACATCATTAGGGGTGAGCGCAGCATGCCCATACCAGGGAA +CGCCCTCATTTTTCAGAAATGTGGTATGGCTTATCAAAAAGAACGATGCATACCCCACAA +TAAAAATAAGCTACAATAATACCAATCAGGAAGATCTGTTGATACTGTGGGGGATTCACC +ATTCCAACAATGCAGCAGAGCAGACGAACCTCTATAAAAACCCAACCACCTATATTTCCG +TTGGGACATCAACATTAAACCAGAGATTGGTACCAAAAATAGCTACTAGATCCCAAGTGA +ATGGACAGCGGGGAAGAATGGATTTCTTCTGGACAATTCTAAAACCGAATGATGCAATCC +ATTTCGAGAGTAATGGAAATTTCATTGCTCCAGAATATGCATACAAAATTGTCAAGAAAG +GGGACTCAACAATTATGAAAAGTGAAGTGGAATATGGCCACTGCAACACCAAATGTCAAA +CTCCAATAGGGGCGATAAACTCTAGTATGCCATTTCACAATATACACCCTCTCACCATCG +GGGAATGCCCCAAATACGTGAAATCAAACAAATTAGTCCTTGCGACTGGGCTCAGAAATA +ATCCTCTAAGAGAAAAGAGAAGAAAAAGAGGACTATTTGGAGCTATAGCCGGGTTTATAG +AGGGAGGATGGCAGGGAATGGTAGATGGCTGGTATGGGTACCATCATAGCAATGAGCAGG +GGAGTGGGTACGCTGCAGACAAAGAATCCACCCAAAAGGCTATAGATGGAGTTACCAATA +AGGTCAACTCGATTATTGACAAAATGAACACTCAATTTGAGGCCGTTGGAAGGGAATTTA +ATAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAAATGGAAGACGGATTCCTAGATG +TCTGGACTTATAATGCTGAACTTCTAGTTCTCATGGAAAATGAGAGAACTCTAGATTTCC +ATGACTCAAATGTCAAGAACCTTTACGATAAAGTCCGACTACAGCTTAAGGACAATGCAA +AGGAGCTGGGTAATGGTTGTTTTGAGTTCTATCACAAATGTGATAATGAATGTATGGAAA +GTGTAAGAAATGGGACATATGACTACCCGCAATATTCAGAAGAAGCAAGATTAAAAAGAG +AAGAAATAAGCGGAGTGAAATTAGAGTCAATAGGAACTTACCAAATACTGTCAATTTATT +CAACAGTGGCGAGTTCCCTAGCGCTGGCAATCATAGTGGCTGGTTTATCTTTATGGATGT +GCTCCAATGGGTCGTTGCAGTGCAGAATTTGCATTTAA +>A/duck/NhaTrang/75c131/2014 +TTTAATCTGTCAAAATGGAGAAAATAGTGCTTCTTCTTGCAATAGTTAGCCTTGTTAAAG +GTGATCAGATTTGCATTGGTTACCATGCAAACAACTCGACGGAGCAGGTTGACACGATAA +TGGAAAAGAACGTCACTGTTACACATGCCCAAGACATACTAGAAAAGACACACAATGGAA +AGCTCTGCGATTTAAATGGAGTGAAGCCTCTGATTTTGAAGGATTGTAGTGTGGCTGGAT +GGCTTCTCGGAAACCCAATGTGCGACGAATTCATCAGGGTGCCGGAATGGTCTTACATAG +TAGAAAGGGCTAACCCAGCCAATGACCTCTGTTACCCAGGGAACCTCAATGATTATGAAG +AACTGAAACACCTATTGAGCAGAATAAATCATTTTGAGAAAATTCTGATCATCCCCAAGA +GTTCTTGGACCAATCATGAAACATCATTAGGGGTGAGCGCAGCATGCCCATACCAGGGAA +CGCCCTCATTTTTCAGAAATGTGGTATGGCTTATCAAAAAGAACGATGCATACCCCACAA +TAAAAATAAGCTACAATAATACCAATCAGGAAGATCTGTTGATACTGTGGGGGATTCACC +ATTCCAACAATGCAGCAGAGCAGACGAACCTCTATAAAAACCCAACCACCTATATTTCCG +TTGGGACATCAACATTAAACCAGAGATTGGTACCAAAAATAGCTACTAGATCCCAAGTGA +ATGGACAGCGGGGAAGAATGGATTTCTTCTGGACAATTCTAAAACCGAATGATGCAATCC +ATTTCGAGAGTAATGGAAATTTCATTGCTCCAGAATATGCATACAAAATTGTCAAGAAAG +GGGACTCAACAATTATGAAAAGTGAAGTGGAATATGGCCACTGCAACACCAAATGTCAAA +CTCCAATAGGGGCGATAAACTCTAGTATGCCATTTCACAATATACACCCTCTCACCATCG +GGGAATGCCCCAAATACGTGAAATCAAACAAATTAGTCCTTGCGACTGGGCTCAGAAATA +ATCCTCTAAGAGAAAAGAGAAGAAAAAGAGGACTATTTGGAGCTATAGCCGGGTTTATAG +AGGGAGGATGGCAGGGAATGGTAGATGGCTGGTATGGGTACCATCATAGCAATGAGCAGG +GGAGTGGGTACGCTGCAGACAAAGAATCCACCCAAAAGGCTATAGATGGAGTTACCAATA +AGGTCAACTCGATTATTGACAAAATGAACACTCAATTTGAGGCCGTTGGAAGGGAATTTA +ATAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAAATGGAAGACGGATTCCTAGATG +TCTGGACTTATAATGCTGAACTTCTAGTTCTCATGGAAAATGAGAGAACTCTAGATTTCC +ATGACTCAAATGTCAAGAACCTTTACGATAAAGTCCGACTACAGCTTAAGGACAATGCAA +AGGAGCTGGGTAATGGTTGTTTTGAGTTCTATCACAAATGTGATAATGAATGTATGGAAA +GTGTAAGAAATGGGACATATGACTACCCGCAATATTCAGAAGAAGCAAGATTAAAAAGAG +AAGAAATAAGCGGAGTGAAATTAGAGTCAATAGGAACTTACCAAATACTGTCAATTTATT +CAACAGTGGCGAGTTCCCTAGCGCTGGCAATCATAGTGGCTGGTTTATCTTTATGGATGT +GCTCCAATGGGTCGTTGCAGTGCAGAATTTGCATTTAAATTTGTGAGCTCAGATTGTAGT +TA +>A/tundraswan/Tottori/C6nk/2014 +AGCAAAAGCAGGGGTTCAATCTGTCAAAATGGAGAAAATAGTGCTTCTTCTTGCAGTGAT +TAGCCTTGTTAAAAGTGATCAGATTTGCATTGGTTACCATGCAAACAACTCAACAAAGCA +GGTTGACACGATAATGGAGAAAAACGTCACTGTTACACATGCCCAAGACATACTGGAAAA +GACACACAACGGGAAGCTCTGCGATCTTAATGGAGTGAAGCCCCTGATTCTAAAGGATTG +TAGCGTAGCTGGGTGGCTCCTTGGAAATCCAATGTGCGACGAGTTCATCAGGGTACCGGA +ATGGTCTTACATCGTGGAGAGGGCTAACCCAGCCAACGACCTCTGTTACCCAGGGACCCT +CAATGACTATGAGGAACTGAAACACCTATTGAGCAGAATAAATCATTTTGAGAAAACTCT +AATCATCCCCAGGAGTTCTTGGCCCAATCATGAAACATCATTAGGGGTGAGCGCAGCATG +TCCATACCAGGGAGCATCCTCATTTTTCAGAAATGTGGTATGGCTCATCAAAAAGAACGA +TGCATACCCGACAATAAAGATAAGCTACAATAATACCAATCGGGAAGATCTTTTGATACT +GTGGGGGATTCATCATTCCAACAATGCAGCAGAGCAGACAAATCTCTATAAAAACCCAGA +CACTTATGTTTCCGTTGGGACATCAACATTAAACCAGAGATTGGTGCCAAAAATAGCTAC +TAGATCCCAAGTAAACGGGCAGAGTGGAAGAATGGATTTCTTCTGGACAATTTTAAAACC +GAATGATGCAATCCACTTTGAGAGTAATGGAAATTTCATTGTTCCAGAATATGCATACAA +AATTGTCAAGAAAGGGGACTCAACAATTATGAAAAGTGAAATGGAATATGGCCACTGCAA +CACCAAATGTCAAACTCCAATAGGGGCGATAAACTCTAGCATGCCATTCCACAATATACA +CCCTCTCACCATCGGGGAATGCCCCAAATACGTGAAGTCGAACAAATTAGTCCTTGCGAC +TGGGCTCAGAAATAGTCCTCTAGGAGAAAGAAGAAGAAAAAGAGGACTATTTGGAGCTAT +AGCAGGGTTTATAGAGGGAGGATGGCAGGGAATGGTAGACGGTTGGTATGGGTATCATCA +TAGCAATGAGCAGGGGAGTGGGTACGCTGCAGACAAAGAATCCACCCAAAAGGCAATAGA +TGGAGTTACCAATAAGGTCAACTCAATCATTGACAAAATGAACACTCAATTTGAGGCCGT +TGGAAGGGAATTTAATAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAAATGGAAGA +CGGATTCCTAGATGTCTGGACTTATAATGCTGAACTTTTAGTTCTCATGGAAAATGAGAG +AACTCTAGATTTCCATGACTCAAATGTCAAGAACCTTTACGACAAAGTCCGACTACAGCT +TAGGGATAATGCAAAGGAGCTGGGTAATGGTTGTTTCGAGTTCTATCACAAATGTGATAA +CGAATGTATGGAGAGCGTAAGAAATGGGACGTATGACTACCCTAAGTATTCAGAAGAAGC +AATATTAAAAAGAGAAGAAATAAGCGGAGTGAAATTAGAATCAATAGGAACTTACCAGAT +ACTGTCAATTTATTCAACAGTGGCGAGTTCCCTAGCACTGGCAATCATAGTGGCTGGTCT +ATCTTTATGGATGTGCTCTAATGGGTCGTTACAATGCAGAATTTGCATCTAAATTTGTGA +GCTCAGATTGTAATTAAAAACACCCTTGTTTCTACT +>A/mandarinduck/Gifu/2112D001/2014 +TTCAATCTGTCAAAATGGAGAAAATAGTGCTTCTTCTTGCAGTGGTTAGCCTTGTTAAAA +GTGATCAGATTTGCATTGGTTACCATGCAAACAACTCAACAAAGCAGGTTGACACGATAA +TGGAAAAGAACGTCACTGTTACACATGCTCAAGACATACTGGAAAAGACACACAACGGGA +AGCTCTGCGATCTTAATGGAGTGAAGCCCCTAATTCTAAAGGATTGTAGCGTAGCTGGGT +GGCTCCTTGGAAATCCAATGTGTGACGAGTTCATCAGGGTGCCGGAATGGTCTTACATCG +TGGAGAGGGCTAACCCAGCCAACGACCTCTGTTACCCAGGGACCCTCAAGGACTATGAGG +AACTGAAACACCTATTGAGCAGAATAAATCATTTTGAGAAAACTCTGATCATCCCCAAGA +GTTCTTGGCCCAATCATGAAACATCATTAGGGGTGAGCGCAGCATGTCCATACCAGGGAG +CATCCTCATTTTACAGAAATGTGGTATGGCTCATCAAAAAGAACGATGCATACCCGACAA +TAGAGATAAGCTACAATAATACCAATCGGGAAGATCTTTTGATACTATGGGGGATTCATC +ATTCCAACAATGCAGCAGAGCAGACAAATCTCTATAAAAACCCAGACACTTATGTTTCCG +TTGGGACATCAACATTAAACCAGAGATTGGTGCCAAAAATAGCTACTAGATCCCAAGTAA +ACGGGCAACGTGGAAGAATGGATTTCTTCTGGACAATTTTAAAACCGAATGATGCAATCC +ACTTTGAGAGTAATGGAAATTTCATTGCTCCAGAATATGCATACAAGATTGTCAAGAAAG +GGGACTCAACAATTATGAAAAGTGAAGTGGAATATGGCCACTGCAACACCAAATGTCAAA +CTCCAATAGGGGCGATAAACTCTAGCATGCCATTCCACAATATACACCCTCTCACCATCG +GGGAATGCCCCAAATACGTGAAGTCAAACAAATTAGTCCTTGCGACTGGGCTCAGAAATA +GTCCTCTAAGAGAAAGAAGAAGAAAAAGAGGACTATTTGGAGCTATAGCAGGATTTATAG +AGGGAGGATGGCAGGGAATGGTAGACGGTTGGTATGGATACCACCATAGCAATGAGCAGG +GGAGTGGGTACGCTGCAGACAAAGAATCCACCCAAAAGGCAATAGATGGAGTTACCAATA +AGGTCAACTCAATCATTGACAAAATGAACACTCAATTTGAGGCCGTTGGAAGGGAATTTA +ATAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAAATGGAAGACGGATTCCTAGATG +TCTGGACTTATAATGCTGAACTTTTAGTTCTCATGGAAAATGAGAGAACTCTAGATTTCC +ATGACTCAAATGTCAAGAACCTTTACGACAAAGTCCGATTACAGCTTAGGGATAATGCAA +AGGAGCTGGGTAATGGTTGTTTCGAGTTCTATCACAAATGTGATAACGAATGTATGGAAA +GCGTAAGAAATGGGACGTATGACTACCCTAAGTATTCAGAAGAAGCAGGATTAAAAAGAG +AAGAAATAAGCGGAGTGAAATTAGAATCAATAGGAACTTACCAAATACTGTCAATTTATT +CAACAGTGGCAAGTTCCCTAGCACTGGCAATCATAGTGGCTGGTCTATCTTTATGGATGT +GCTCTAATGGGTCGTTACAATGCAGAATTTGCATCTAAATTTGTGAGCTCAGATTGTAAT +TA diff --git a/data_output/community/moncla-lab/iav-h5/ha/2.3.4.4/unreleased/genome_annotation.gff3 b/data_output/community/moncla-lab/iav-h5/ha/2.3.4.4/unreleased/genome_annotation.gff3 new file mode 100644 index 00000000..c244bfed --- /dev/null +++ b/data_output/community/moncla-lab/iav-h5/ha/2.3.4.4/unreleased/genome_annotation.gff3 @@ -0,0 +1,3 @@ +##gff-version 3 +##sequence-region EPI1846961 1 1704 +EPI1846961 feature gene 1 1704 . + . gene_name="HA" \ No newline at end of file diff --git a/data_output/community/moncla-lab/iav-h5/ha/2.3.4.4/unreleased/pathogen.json b/data_output/community/moncla-lab/iav-h5/ha/2.3.4.4/unreleased/pathogen.json new file mode 100644 index 00000000..78fe3dce --- /dev/null +++ b/data_output/community/moncla-lab/iav-h5/ha/2.3.4.4/unreleased/pathogen.json @@ -0,0 +1,134 @@ +{ + "alignmentParams": { + "excessBandwidth": 9, + "terminalBandwidth": 100, + "allowedMismatches": 4, + "gapAlignmentSide": "right", + "minSeedCover": 0.1 + }, + "attributes": { + "name": "H5Nx clade 2.3.4.4", + "reference accession": "EPI1846961", + "reference name": "A/Astrakhan/3212/2020(H5N8)", + "segment": "ha", + "experimental": true + }, + "compatibility": { + "cli": "3.0.0-alpha.0", + "web": "3.0.0-alpha.0" + }, + "defaultCds": "HA", + "deprecated": false, + "experimental": true, + "files": { + "changelog": "CHANGELOG.md", + "genomeAnnotation": "genome_annotation.gff3", + "pathogenJson": "pathogen.json", + "readme": "README.md", + "reference": "reference.fasta", + "treeJson": "tree.json", + "examples": "example_sequences.fasta" + }, + "meta": { + "bugs": "https://github.com/nextstrain/nextclade_data/issues", + "source code": "https://github.com/nextstrain/nextclade_data" + }, + "qc": { + "frameShifts": { + "enabled": true + }, + "missingData": { + "enabled": false, + "missingDataThreshold": 100, + "scoreBias": 10 + }, + "mixedSites": { + "enabled": true, + "mixedSitesThreshold": 4 + }, + "privateMutations": { + "cutoff": 18, + "enabled": true, + "typical": 6 + }, + "snpClusters": { + "clusterCutOff": 5, + "enabled": false, + "scoreWeight": 50, + "windowSize": 100 + }, + "stopCodons": { + "enabled": true + } + }, + "aaMotifs": [ + { + "name": "glycosylation", + "nameShort": "Glyc.", + "nameFriendly": "Glycosylation", + "description": "N-linked glycosylation motifs (N-X-S/T with X any amino acid other than P)", + "includeCdses": [ + { + "cds": "HA", + "ranges": [ + { + "begin": 0, + "end": 532 + } + ] + } + ], + "motifs": [ + "N[^P][ST]" + ] + }, + { + "name": "cleavage_site", + "nameShort": "CS", + "nameFriendly": "CleavageSite", + "description": "Cleavage site of HA", + "includeCdses": [ + { + "cds": "HA", + "ranges": [ + { + "begin": 340, + "end": 345 + } + ] + } + ], + "motifs": [ + "[A-Z-]{5}" + ] + }, + { + "name": "polybasic_cleavage_site", + "nameShort": "PBCS", + "nameFriendly": "PolybasicCleavageSite", + "description": "Polybasic cleavage site of HA", + "includeCdses": [ + { + "cds": "HA", + "ranges": [ + { + "begin": 340, + "end": 345 + } + ] + } + ], + "motifs": [ + "^([A-Z-]*[RK][A-Z-]*){4}$" + ] + } + ], + "schemaVersion": "3.0.0", + "version": { + "tag": "unreleased", + "compatibility": { + "cli": "3.0.0-alpha.0", + "web": "3.0.0-alpha.0" + } + } +} diff --git a/data_output/community/moncla-lab/iav-h5/ha/2.3.4.4/unreleased/reference.fasta b/data_output/community/moncla-lab/iav-h5/ha/2.3.4.4/unreleased/reference.fasta new file mode 100644 index 00000000..e401ed14 --- /dev/null +++ b/data_output/community/moncla-lab/iav-h5/ha/2.3.4.4/unreleased/reference.fasta @@ -0,0 +1,23 @@ +>EPI1846961 Influenza A virus (A/Astrakhan/3212/2020(H5N8)) hemagglutinin (HA) gene, complete cds +ATGGAGAACATAGTACTTCTTCTTGCAATAGTTAGCCTTGTTAAAAGTGATCAGATTTGCATTGGTTATCATGCAAACAA +TTCGACAGAGCAAGTTGACACGATAATGGAAAAGAACGTCACTGTTACACATGCCCAAGACATACTGGAAAAAACACACA +ACGGGAAGCTCTGTGATCTAAATGGGGTGAAGCCTCTGATTTTAAAGGATTGTAGTGTAGCTGGATGGCTCCTCGGAAAC +CCAATGTGCGACGAATTCATCAGAGTGCCGGAATGGTCCTACATAGTGGAGAGGGCTAATCCAGCTAATGACCTCTGCTA +CCCAGGGAGCCTCAATGACTATGAAGAACTGAAACACCTGTTGAGCAGAATAAATCATTTTGAGAAGATTCTGATTATCC +CCAAGAGTTCCTGGCCAAACCATGAAACATCACTAGGGGTGAGCGCAGCTTGTCCATACCAGGGAGCGCCCTCCTTTTTC +AGAAATGTGGTGTGGCTTATCAAAAAGAACGATGCATACCCAACGATAAAGATAAGCTACAATAATACCAATCGGGAAGA +TCTCTTGATACTGTGGGGGATTCATCATTCCAACAATGCAGAAGAGCAGACAAATCTCTATAAAAACCCAACCACCTACA +TTTCAGTTGGAACATCAACTTTAAACCAGAGGTTGGTACCAAAAATAGCTACTAGATCCCAAGTAAACGGGCAACGTGGA +AGAATGGACTTCTTCTGGACAATTTTAAAACCGGATGATGCAATCCATTTCGAGAGTAATGGAAATTTCATTGCTCCAGA +ATATGCATACAAAATTGTCAAGAAAGGGGACTCAACAATTATGAAAAGTGGAGTGGAATATGGCCACTGCAACACCAAAT +GTCAAACCCCAGTAGGAGCGATAAATTCTAGTATGCCATTCCACAACATACATCCTCTCACCATTGGGGAATGCCCCAAA +TACGTGAAGTCAAACAAGTTGGTCCTTGCGACTGGGCTCAGAAATAGTCCTCTAAGAGAAAAGAGAAGAAAAAGAGGCCT +GTTTGGGGCGATAGCAGGGTTTATAGAGGGAGGATGGCAGGGAATGGTTGATGGTTGGTATGGGTACCACCATAGCAATG +AGCAGGGGAGTGGGTACGCTGCAGACAAAGAATCCACCCAAAAGGCAATAGATGGAGTTACCAATAAGGTCAACTCAATC +ATTGACAAAATGAACACTCAATTTGAGGCAGTTGGAAGGGAGTTTAATAACTTAGAAAGGAGGATAGAGAATTTGAACAA +GAAAATGGAAGACGGATTCCTAGATGTCTGGACCTATAATGCTGAACTTCTAGTTCTCATGGAAAACGAGAGGACTCTAG +ATTTCCATGATTCAAATGTCAAGAACCTTTACGACAAAGTCAGACTACAGCTTAGGGATAATGCAAAGGAGCTGGGTAAC 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b/data_output/community/moncla-lab/iav-h5/ha/all-clades/unreleased/CHANGELOG.md @@ -0,0 +1,9 @@ +## Unreleased + +Updated private mutation QC metrics such that the typical value is the median value and the cutoff is the 97.5th percentile of private mutation counts assigned to unique GISAID sequences. + +## 2024-05-08T11:39:52Z + +Initial release for Nextclade v3! + +Read more about Nextclade datasets in the documentation: https://docs.nextstrain.org/projects/nextclade/en/stable/user/datasets.html diff --git a/data_output/community/moncla-lab/iav-h5/ha/all-clades/unreleased/README.md b/data_output/community/moncla-lab/iav-h5/ha/all-clades/unreleased/README.md new file mode 100644 index 00000000..042d225e --- /dev/null +++ b/data_output/community/moncla-lab/iav-h5/ha/all-clades/unreleased/README.md @@ -0,0 +1,34 @@ +# H5Nx (all clades) dataset with A/Goose/Guangdong/1/96 reference + +| attribute | value | +| -------------------- | ---------------------------------------- | +| dataset name | H5Nx (all clades) (provisional) | +| reference strain | A/Goose/Guangdong/1/96(H5N1) | +| reference accession | AF144305.1 | + +## Authors and contacts + +Maintained by: [Jordan Ort](https://lmoncla.github.io/monclalab/team/JordanOrt/) + +With the help of: [Louise Moncla](https://lmoncla.github.io/monclalab/team/LouiseMoncla/), Todd Davis, Tommy Lam, Samuel Shephard, Richard Neher + +## Scope of this dataset +This dataset uses the first highly-pathogenic avian influenza (HPAI) isolate (A/Goose/Guangdong/1/96) as a reference and is suitable for the analysis of circulating and historical H5 sequences, including low-pathogenicity avian influenza (LPAI) isolates. + +## Features +This dataset supports + + * Assignment to clades and subclades based on the provisional nomenclature defined by the WHO/FAO/WOAH H5 Nomenclature Working Group + * Sequence QC + * Phylogenetic placement + +## Clades of H5Nx avian influenza viruses + +The WHO/FAO/WOAH H5 Nomenclature Working Group define "clades" as genetically divergent groups of viruses, based on their HA gene segment. +Viruses falling into a given clade share a common ancestor with significant bootstrap support and have low levels of within-clade diversity. +When significant within-clade diversity is seen, these clades can be further split into sub-clades; for example, clade `2.3.4.4` is being split into eight additional sub-clades, named `2.3.4.4a` through `2.3.4.4h` due to high circulating diversity within the clade. +This Nextclade dataset incorporates these provisional `2.3.4.4` sub-clades, as well as sub-clades `2.3.2.1a` through `2.3.2.1g` for the `2.3.2.1` split. + +## What is Nextclade dataset + +Read more about Nextclade datasets in Nextclade documentation: https://docs.nextstrain.org/projects/nextclade/en/stable/user/datasets.html \ No newline at end of file diff --git a/data_output/community/moncla-lab/iav-h5/ha/all-clades/unreleased/dataset.zip 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b/data_output/community/moncla-lab/iav-h5/ha/all-clades/unreleased/example_sequences.fasta @@ -0,0 +1,1455 @@ +>A/chicken/Miyazaki/K11/2007 +GCAGGGGTTCAATCTGTCAAAATGGAGAAAATAGTGCTTCTTCTTGCAATAATCAGTCTT +GTTAAAAGTGATCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGAC +ACAATAATGGAAAAGAACGTCACTGTTACACACGCCCAAGACATACTGGAAAAGACACAC +AACGGGAAGCTCTGCGATCTAGACGGAGTGAAGCCTCTAATTTTAAGAAATTGTAGTGTA +GCTGGATGGCTCCTTGGGAATCCAATGTGTGACGAATTCCTCAATGTGCCGGAATGGTCT +TACATAGTGGAGAAGATCAATCCAGCCAATGACCTCTGTTACCCAGGGAATTTCAACGAC +TATGAAGAACTGAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATC +CCCAAAAGTTCTTGGTCAGATCATGAAGCCTCATCAGGGGTGAGCTCAGCATGTCCATAC +CAGGGAAGGTCCTCCTTTTTTAGAAATGTGGTATGGCTTATCAAAAAGAACGATTCATAC +CCAACAATAAAGAGAAGTTACAATAATACCAACCAAGAAGACCTTTTGGTACTGTGGGGA +ATTCACCATCCAAATGATGCGGCAGAGCAGACAAAGCTCTATCAAAACCCAACCACCTAT +ATTTCCGTTGGGACATCAACACTAAACCAGAGATTGGTACCAAAAATAGCTACTAGATCC +AAGGTAAACGGGCAAAGTGGAAGGATGGAGTTCTTTTGGACAATTTTAAAACCGAATGAT +GCAATAAATTTTGAGAGTAATGGAAATTTCATTGCTCCAGAAAATGCATACAAAATTGTC +AAGAAAGGGGACTCAACAATCATGAAAAGTGAATTGGAATATGGTAACTGCAACACCAAG +TGTCAAACTCCAATAGGGGCGATAAACTCTAGTATGCCATTCCACAACATCCACCCTCTC +ACCATCGGGGAATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACTGGGCTC +AGAAATAGCCCTCAAGGAGAGAGAAGAAGAAAAAAGAGAGGACTATTTGGAGCTATAGCA +GGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTGGTATGGGTACCACCATAGC +AACGAACAGGGGAGTGGGTACGCTGCAGACAAAGAATCCACTCAAAAGGCAATAGATGGA +GTCACCAATAAGGTCAACTCGATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGA +AGGGAATTTAATAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGA +TTTCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAATGAGAGAACT +CTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAAGGTCCGACTACAGCTTAGG +GATAATGCAAAGGAGCTTGGTAACGGTTGTTTCGAGTTCTATCACAGATGTGATAATGAA +TGTATGGAAAGTGTAAGAAACGGAACGTATGACTACCCGCAGTATTCAGAAGAATCAAGA +TTAAAAAGAGAGGAAATAAGTGGAGTAAAATTGGAATCAATAGGAACTTATCAAATACTG +TCAATTTATTCAACAGTGGCGAGCTCCCTAGCACTGGCAATCATGGTGGCTGGTCTATCT +TTATGGATGTGCTCCAATGGATCGTTACAATGCAGAATTTGCATTTAAATTTGTGAGTTC +AAATTGTAGTTAAAAACACCCTTG +>A/junglecrow/Iwate/0304I001/2022 +AAGCAGGGGTTCACTCTGTCAAAATGGAGAACATAGTACTTCTTCTTGCAATAATTAGCC +TTGTTAAAAGTGATCAGATTTGCATTGGTTACCATGCAAACAATTCGACAGAGCAGGTTG +ACACGATAATGGAAAAGAACGTCACCGTTACACATGCCCAAGACATACTGGAAAAAACAC +ACAACGGGAAGCTCTGTGATCTAAATGGGGTGAAGCCTCTGATTTTAAAGGATTGTAGTG +TAGCTGGATGGCTCCTCGGAAACCCAATGTGCGACGAATTCATCAGAGTGCCGGAATGGT +CCTACATAGTGGAGCGGGCTAATCCAGCTAATGACCTCTGTTACCCAGGGAGCCTCAATG +ACTACGAAGAACTGAAACACCTGTTGAGCAGAATAAATCACTTTGAGAAGATTCTGATCA +TCCCCAAGAGTTCCTGGCCAAATCATGAAACATCACTAGGGGTGAGCGCAGCTTGTCCAT +ACCAGGGAGCGCCCTCCTTTTTCAGAAATGTGGTGTGGCTTATCAAAAAGAACGATGCAT +ACCCAACAATAAAGATAAGCTACAATAATACCAATCGGGAAGATCTCTTGATACTGTGGG +GGATTCATCATTCCAACAATGCAGAAGAGCAGACAAATCTCTATAAAAACCCAACCACCT +ACATTTCAGTTGGAACATCAACTTTAAACCAGAGGTTGGTACCAAAAATAGCTACTAGAT +CCCAAGTAAACGGGCAACGTGGAAGAATGGACTTCTTCTGGACAATTTTAAAACCAGATG +ATGCCATCCATTTCGAGAGTAATGGAAATTTCATTGCTCCAGAATATGCATACAAAATTG +TCAAGAAAGGGGACTCAACAATTATGAAAAGTGGAGTGGAATATGGCCACTGCAACACCA +AATGTCAAACCCCAGTAGGAGCGATAAATTCTAGTATGCCATTCCACAACATACATCCTC +TCACCATTGGGGAATGCCCCAAATACGTGAAATCAAACAAGTTGGTCCTTGCGACTGGGC +TCAGAAATAGTCCTCTAAGAGAAAGGAGAAGAAAAAGAGGCCTGTTTGGGGCGATAGCAG +GGTTTATAGAGGGAGGATGGCAGGGAATGGTTGATGGTTGGTATGGGTACCATCATAGCA +ATGAGCAGGGGAGTGGGTACGCTGCAGACAAAGAATCCACCCAAAAGGCAATAGATGGAG +TTACCAATAAGGTCAACTCAATCATTGACAAAATGAACACTCAATTTGAGGCAGTTGGAA +GGGAGTTTAATAACTTAGAAAGGAGGATAGAGAATTTGAACAAGAAAATGGAAGACGGAT +TCCTAGATGTCTGGACCTATAATGCTGAACTTCTAGTTCTCATGGAAAACGAGAGGACTC +TAGATTTCCATGATTCAAATGTCAAGAACCTTTACGACAAAGTCAGACTACAGCTTAGGG +ATAATGCAAAGGAGCTGGGTAATGGCTGTTTCGAATTCTATCACAAATGCGATAATGAAT +GTATGGAAAGTGTGAGAAATGGGACGTATGACTACCCTCAGTATTCAGAAGAAGCAAGAT +TAAAAAGAGAAGAAATAAGCGGAGTGAAATTAGAATCAATAGGAACTTACCAGATACTGT +CAATTTATTCAACAGCGGCGAGTTCCCTAGCACTGGCAATCATGATGGCTGGTCTATCTT +TATGGATGTGCTCCAATGGGTCGTTACAGTGCAGAATTTGCATTTAGATTTGTGAGCTCA +GATTGTAGTTAAAAACACCCTTGTTTCTAC +>A/peregrinefalcon/Okayama/3312A007/2020 +ATGGAGAACATAGTGCTTCTTCTTGCAATAGTTAGCCTTGTTAAAAGTGATCAAATTTGC +ATTGGTTACCATGCAAACAACTCGACAGAACAAGTCGACACGATAATGGAAAAGAACGTC +ACTGTTACACATGCCCAAGACATACTGGAAAAAGCACACAACGGGAAGCTCTGCGATTTA +AATGGGGTGAAACCTCTGGTTTTAAATGATTGTAGTGTAGCTGGATGGCTCCTCGGAAAC +CCAATGTGCGACGAATTCATCAGAGTGCCGGAATGGTCTTACATAGTAGAGAGGACTAAC +CCAGCTAATGACCTCTGTTACCCAGGGAGCCTCAATGACTATGAAGAACTAAAACACCTG +TTGAGCAGAATAAAACATTTTGAGAAGATTCTGATCATCCCCAAGAGTTCTTGGCCCAAT +CATGAAACATCATTGGGGGTGAGCGCAGCTTGTCCATACCAGGGAACGCCCTCCTTTTTC +AGAAATGTGGTATGGCTTATCAAAAAGAATGATGCATACCCAACAATAAAGATAAACTAC +AATAATACCAATCGGGAAGATCTCTTGATACTGTGGGGGATTCATCATTCCAACAATGAA +GAAGAGCAGACAAATCTATATAAAAACCCAACCACCTATATTTCAGTTGGGACATCAACG +TTAAACCAGAGATTGGTACCAAAAATAGCTACTAGATCCCAAGTAAATGGGCAGCGGGGA +AGAATGGACTTCTTCTGGACAATTTTAAAACCAAATGATGCAATCCACTTCGAGAGTAAT +GGAAATTTCATTGCTCCAGAATATGCATACAAAATTGTCAAGAAAGGGGACTCAACAATT +ATGAAAAGTGAAGTGGAATATGGCCACTGCAACACCAAATGTCAAACCCCAGTAGGAGCG +ATAAACTCTAGTATGCCATTCCACAATATACATCCTCTCACCATCGGGGAATGCCCCAAA +TACGTGAAGTCAAACAAGTTGGTCCTTGCAACTGGGCTCAGAAATAGTCCTCTAAGAGAA +AAGAGAAGAAAAAGAGGGCTGTTTGGGGCGATAGCAGGTTTCATAGAGGGAGGATGGCAG +GGAATGGTTGATGGTTGGTATGGGTACCACCATAGCAATGAGCAGGGAAGTGGGTACGCT +GCAGACAAGGAATCCACCCAAAAGGCAATAGATGGAGTTACCAATAAGGTCAACTCGATC +ATTAACAAAATGAACACTCAATTTGAGGCAGTTGGAAGGGAGTTTAATAACTTAGAAAGG +AGGATAGAGAATTTGAACAAGAAAATGGAAGACGGGTTCCTAGATGTCTGGACCTATAAT +GCTGAACTTTTAGTTCTCATGGAAAACGAGAGGACTCTAGATTTCCATGACTCAAATGTC +AAGAACCTTTACGACAAAGTCAGACTGCAGCTTAGGGATAATGCAAAGGAGCTGGGTAAC +GGTTGTTTCGAGTTCTATCACAAATGTGATAATGAATGTATGGAAAGTGTGAGAAATGGG +ACGTATTACTACCCTCAGTATTCAGAAGAAGCAAGATTAAAAAGGGAAGAAATAAGCGGA +GTGAAATTGGAATCAATAGGAACTTACCAAATACTGTCAATTTATTCAACAGTGGCGAGT +TCCCTAGCACTGGCAATCATGGTGGCTGGTCTATCTTTATGGATGTGTTCCAATGGGTCG +TTACAGTGCAGAATTTGCATTTAA +>A/Muscovyduck/Vietnam/LBM992c/2017 +AAGCAGGGGTTCACTCTGTCAAAATGGAGAAAACAGTTCTTCTCTTTGCAACAATCAGCC +TTGTCAAAAGCGATCATATTTGCATTGGTTATCATGCAAATAACTCGACAGAGCAGGTTG +ACACAATAATGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAAAAGACAC +ACAACGGGAAGCTCTGCGATCTAAATGGAGTGAAGCCTCTGATTTTAAAAGATTGTAGTG +TAGCAGGATGGCTCCTCGGAAATCCTTTGTGTGACGAATTCACCAATGTGCCAGAATGGT +CTTACATAGTAGAGAAGGCCAATCCAGCCAATGACCTCTGTTACCCAGGGAATTTCAACG +ATTATGAAGAATTGAAACACCTATTGAGCAGGATAAACCACTTTGAGAAAATACAGATCA +TCCCCAAAGATTCTTGGTCAGATCATGAAGCCTCATTGGGGGTGAGCGCAGCATGTTCAT +ACCAGGGAAATTCCTCCTTCTTCAGAAATGTGGTGTGGCTTATCAAAAAGGACAATGCAT +ACCCAACAATAAAAAAAGGCTACAATAATACCAACCGAGAAGATCTCTTGATACTGTGGG +GGATCCACCATCCTAATGATGAGGCAGAGCAGACAAGGCTCTATCAAAACCTAACTACCT +ATATTTCCATTGGGACTTCAACACTAAACCAGAGATTGGTACCAAAAATAGCCACTAGAT +CCAAAATAAACGGGCAAAGTGGCAGAATAGATTTCTTCTGGACAATTTTAAAACCGAATG +ACGCAATCCACTTCGAGAGTAATGGAAATTTCATTGCTCCAGAATATGCATACAAAATTG +TCAAGAAGGGAGACTCCACAATCATGAGAAGTGAAGTGGAATATGGTAACTGCAACACCA +GGTGTCAGACTCCAATAGGGGCGATAAACTCTAGTATGCCATTCCACAACATACACCCTC +TCACCATCGGAGAATGTCCCAAATATGTGAAATCAAACAAATTAGTTCTTGCAACTGGGC +TCAGAAATAGTCCTCAAAGAGAGAGAAGAAGAAAAAGAGGACTTTTTGGAGCTATAGCAG +GTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTGGTATGGGTACCACCACAGCA +ATGAACAGGGGAGTGGTTATGCTGCAGACAAAGAATCCACTCAAAAGGCGATAAACGGAG +TCACCAATAAGGTCAATTCGATCATTGACAAAATGAACACTCAGTTTGAGGCTGTAGGAA +GGGAATTTAATAACTTAGAGAGGAGAATAGAAAATTTAAACAAGAAGATGGAAGACGGAT +TCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAGAATGAGAGAACTC +TAGACTTCCATGACTCAAATGTCAAGAACCTTTACGATAAGGTCCGACTACAGCTTAAGG +ACAATGCAAAAGAGCTGGGGAACGGTTGTTTCGAGTTCTATCACAAATGTAATAATGAAT +GTATGGAAAGTGTAAGAAATGGGACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGAT +TAAAAAGAGAGGAAATAAGTGGAGTAAAACTGGAATCAATAGGAATCTACCAAATACTGT +CAATTTATTCAACAGTGGCGAGTTCCCTAGTGCTGGCAATCATGATGGCTGGTCTATCTT +TATGGATGTGTTCCAACGGGTCGTTACAGTGCAGAATTTGCATTTAAGTTTGTGAATTCA +AATTGTAGTTAAAAACACCCTTGTTT +>A/chicken/Egypt/BSU-NLQP-DAK-3/2010 +ATGGAGAAAATAGTGCTTCTTCTTGCAATAGTCAGTATTGTTAAAAGTGATCAGATTTGC +ATTGGTTACCATGCAAACAACTCGACAGAGCAAGTTGACACAATAATGGAAAAGAACGTC +ACTGTTACACACGCCCAAGACATACTGGAAAAGACACACAACGGGAAACTCTGCAATCTA +GATGGAGTGAAGCCTCTAATTTTAAGAGATTGTAGTGTAGCTGGATGGCTCCTCGGGAAC +CCAATGTGCGACGAATTCCTCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGATCAAT +CCAGCCAATGACCTCTGTTATCCAGGGAATTTCAACGACTATGAAGAACTGAAACACCTA +TTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATTCCCAAAAATTCTTGGTCAGAT +CATGAAGCCTCAGGAGTGAGCTCAGCATGTCCATACCAGGGAAGATCCTCCTTTTTTAGA +AATGTGGTATGGCTTACCAAAAAGAACAATGCATACCCAACAATAAAGAAAAGTTACAAT +AATACCAACCAAGAAGATCTTTTGGTACTATGGGGGATTCACCATCCAAATGATGAGGCA +GAGCAGACAAGGCTTTATCAAAACCCAACTACCTATATTTCCGTTGGGACATCAACATTA +AACCAGAGATTGGTACCAAAAATAGCTACTAGATCTAAGGTAAACGGGCAAAGTGGAAGG +ATGGAGTTCTTTTGGACAATTTTAAAATCGAATGATGCAATAAACTTTGAGAGTAATGGA +AATTTCATTGCTCCAGAAAATGCATACAAAATTGTCAAGAAAGGGGACTCAACAATTATG +AAAAGTGAATTGGAATATGGCAACTGCAACACCAAGTGTCAGACTCCAATAGGGGCGATA +AACTCCAGTATGCCATTCCACAACATCCACCCTCTCACCATCGGGGAATGCCCCAAATAT +GTGAAATCAAACAGATTAGTCCTTGCTACTGGGCTCAGAAATAGCCCTCAAGGAGAGAGA +AGAAGAAAAAAGAGAGGACTATTTGGAGCTATAGCAGGTTTT +>A/chicken/Egypt/CL6/2007 +ATGGAGGAAATAGTGCTTCTTCTTGCAATAGTCAGTCTTGTTAAAAGTGATCAGATTTGC +ATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACACAATAATGGAAAAGAACGTC +ACTGTTACACACGCCCAAGACATACTGGAGAAGACACACAACGGGAAACTCTGCGATCTA +GATGGAGTGAAGCCTCTAATTTTAAGAGATTGTAGTGTAGCTGGATGGCTCCTCGGGAAC +CCAATGTGTGACGAATTCCTCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGATCAAT +CCAGCCAATGACCTCTGTTACCCAGGGAATTTCAACAACTATGAAGAACTGAAACACCTA +TTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCCCCAAAAATTCTTGGTCAGAC +CATGAAGCCTCATCAGGAGTGAGCTCAGCATGTCCATACCAGGGAAAATCCTCCTTTTTT +AGAAATGTGGTATGGCTTATCAAAAAGGACAATGCATACCCAACAATAAAGAGAAGTTAC +AATAATACCAACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCGAATGATGCG +GCAGAGCAGACAAGGCTCTATCAAAACCCAACTACCTATATTTCCGTTGGGACATCAACA +CTAAACCAGAGATTGGTACCAAAAATAGCTACTAGATCTAAGGTAAACGGGCAAAGTGGA +AGGATGGAGTTCTTTTGGACAATTTTAAAATCGAATGATGCAATAAACTTTGAGAGTAAT +GGAAATTTCATTGCTCCAGAAAATGCATACAAAATTGTCAAGAAAGGGGACTCAACAATT +ATGAAAAGTGAGTTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATAGGGGCG +ATAAACTCCAGTATGCCATTCCACAACATCCACCCTCTCACCATCGGGGAATGCCCCAAA +TATGTGAAATCAAACAGATTAGTCCTTGCTACTGGGCTCAGAAATAGCCCTCAAGGAGAG +AGAAGAAGAAAAAAGAGAGGACTATTTGGAGCTATAGCAGGTTTTATAGAGGGAGGATGG +CAGGGAATGGTAGATGGTTGGTATGGGTACCACCATAGCAACGAGCAGGGGAGTGGGTAC +GCTGCAGACAAAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCG +ATCATTGACAAAATGAACACTCAGTTTGAGGCTGTTGGAAGGGAATTTAATAACTTAGAA +AGGAGAATAGAAAATTTGAACAAGAAGATGGAAGACGGATTCCTAGATGTCTGGACTTAT +AATGCTGAACTTCTGGTTCTCATGGAAAATGAGAGAACTCTAGACTTTCATGACTCAAAT +GTCAAGAACCTTTACGACAAGGTCCGACTACAGCTTAGGGATAATGCAAAGGAGCTTGGT +AACGGTTGCTTCGAGTTCTATCACAGATGTGATAATGAATGTATGGAAAGTGTAAGAAAC +GGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGATTAAAAAGAGAGGAAATAAGT +GGAGTAAAATTGGAATCAATAGGGACTTACCAAATACTGTCAATTTATTCAACAGTGGCG +AGCTCCCTAGCACTGGCAATCATGGTGGCTGGTCTATTTTTATGGATGTGTTCCAATGGA +TCGTTACAATGCAGAATTTGCATTTAA +>A/chicken/Egypt/BSU-NLQP-DAK-4/2010 +ATGGAGAAAATAGTGCTTCTTCTTGCAATAGTCAGTCTTGTTAAAGGTGATCAGATTTGC +ATTGGTTACCATGCAAACAACTCAACAGAGCAGGTTGACACAATAATGGAAAAGAACGTC +ACTGTTACACACGCTCAAGACATACTGGAAAAGACACACAACGGGAAACTCTGCGATCTA +GATGGAGTGAAGCCTCTAATTTTAAGAGATTGTAGTGTAGCTGGATGGCTCCTCGGGAAC +CCAATGTGTGACGAATTCCCCAATGTGTCGGAATGGTCCTACATAGTGGAGAAGATCAAT +CCAGCCAATGACCTCTGTTACCCAGGGAATTTCAACAACTATGAAGAACTGAAACACCTA +TTGAGCAGAATAAACCGGTTTGAGAAAATTAAGATCATCCCCAAAAGTTCTTGGCCAAAT +CATGAAGCCTCATTGGGAGTGAGCGCAGCATGTCCATACCAAGGAGGACCCTCCTTTTAT +AGAAATGTGGTATGGCTTATCAAAAAGAACAATACATACCCAACAATAAAGGAAAGTTAC +CATAATACCAATCAAGAAGATCTTTTGGTGCTGTGGGGGATTCACCATCCAAATGATGAG +GAAGAGCAGACAAGGATCTATAAAAACCCAAATACCTATATTTCCGTTGGGACATCAACA +CTAAACCAGAGATTGGTACCAAAGATAGCCACTAGATCTAAGGTAAACGGGCAAAGTGGA +AGAGTGGAGTTCTTTTGGACAATTTTAAAATCAAATGATACAATAAACTTTGAGAGTAAT +GGAAATTTCATTGCTCCAGAAAATGCATACAAAATTGTCAAGAAAGGGGACTCAACAATT +ATGAAAAGTGAGTTGGAATATGGTAACTGCAGCACCAAGTGTCAAACTCCAATAGGGGCG +ATAAACTCCAGTATGCCATTCCACAACATCCACCCTCTCACCATCGGGGAATGCCCCAAA +TATGTGAAATCAAACAGATTAGTCCTTGCTACTGGGCTCAGAAATAGCCCTCAAGAAGAG +GGAAGAAGAAAAAAGAGAGGACTATTTGGAGCTATAGCAGGGTTT +>A/chicken/Egypt/BSU-NLQP-DAK-10/2014 +ATGGAGAAAATAGTGCTTCTTCTTGCAATAGTCAGTATTGTTAAAAGTGATCAGATTTGC +ATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACACAATAATGGAAAAGAACGTC +ACTGTTACACACGCCCAAGACATACTGGAAAAGACACACAACGGGAAACTCTGCAATCTA +GATGGAGTGAAGCCTCTAATTTTAAGAGATTGTAGTGTAGCTGGATGGCTCCTCGGGAAC +CCAATGTGCGACGAATTCCTCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGATCAAT +CCAGCCAATGACCTCTGTTATCCAGGGAATTTCAACGACTATGAAGAACTGAAACACCTG +TTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATTCCCAAAGAATCTTGGTCAGAT +CATGAAGCCTCAGGAGTGAGCTCAGCATGTCCATACCAGGGAAGATCCTCCTTTTTTATA +AATGTGGTATGGCTTACCAAAAAGAACGATGCATACCCAACAATAAAGAAAAGTTACAAT +AATACCAATCAAGAAGATCTTTTGGTACTATGGGGGATTCACCATCCAAATGATGCTGCA +GAGCAGACAAGACTTTACCAAAACCCAACTACCTATATTTCCGTTGGGACATCAACACTA +AACCAGAGATTGGTACCCAAAATAGCTACTAGATCTAAGGTAAACGGGCAAAGTGGAAGG +ATGGAGTTCTTTTGGACAATTTTAAAATCGAATGATGCAATAAACTTTGAGAGTAATGGA +AACTTCATTGCTCCGGAAAATGCATACAAAATTGTCAAGAAAGGGGACTCAACAATTATG +AAAAGTGAGTTGGAATATAGTAACTGCAACACCAAGTGCCAGACTCCAATAGGGGCGATA +AATTCCAGTATGCCATTCCACAACATCCACCCTCTCACCATCGGGGAATGCCCAAAATAT +GTGAAATCAAACAGATTAGTCCTTGCTACTGGGCTCAGAAATAGCCCTCAAGGAGAGAAA +AGAAGAAAAAAGAGAGGACTATTTGGAGCTATAGCAGGTTTT +>A/chicken/Egypt/BSU-NLQP-DAK-9/2014 +ATGGAGAAAATAGTGCTTCTTCTTGCAATAGTCAGTATTGTTAAAAGTGATCAGATTTGC +ATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACACAATAATGGAAAAGAACGTC +ACTGTTACACACGCCCAAGACATACTGGAAAAGACACACAACGGGAAACTCTGCAATCTA +GATGGAGTGAAGCCTCTAATTTTAAGAGATTGTAGTGTAGCTGGATGGCTCCTCGGGAAC +CCAATGTGCGACGAATTCCTCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGATCAAT +CCAGCCAATGACCTCTGTTATCCAGGGAATTTCAACGACTATGAAGAACTGAAACACCTG +TTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATTTCCAAAGATTCTTGGTCAGAT +CATGAAGCCTCAGGAGTGAGCTCAGCATGTCCATACCAGGGAAGATCCTCCTTTTTTAGA +AATGTGGTATGGCTTACCAAAAAGAACGATACATACCCAACAATAAAGAAAAGTTACAAT +AATACCAATCAAGAAGATCTTTTGGTACTATGGGGGATTCACCACCCAAATGATGCTGCA +GAGCAGACAAGGATTTTTACCCAAAACCCAACTACCTATATTTCCGTTGGGACATCAACA +TTAAACCAGAGATTGGTACCCAAAATAGCTACTAGATCTAAGGTAAACGGGCAAAGTGGA +AGGATGGAGTTCTTTTGGACAATTTTAAAATCGAATGATGCAATAAACTTTGAGAGTAAT +GGAAACTTCATTGCTCCAGAAAATGCATACAAAATTGTCAAGAAAGGGGACTCAACAATT +ATGAAAAGTGAGTTGGAATATAGTAACTGCAACACCAAGTGCCAGACTCCAATAGGGGCG +ATAAATTCCAGTATGCCATTCCACAACATCCACCCTCTCACCATCGGGGAATGCCCCAAA +TATGTGAAATCAAACAGATTAGTCCTTGCTACTGGGCTCAGAAATAGCCCTCAAGGAGAG +AAAAGAAGAAAAAAGAGAGGACTATTTGGAGCTATAGCAGGTTTT +>A/muscovyduck/Vietnam/LBM399/2013 +TTCACTCTGTCAAAATGGAGAAAATAGTTCTTCTCTTTGCAACAATCAGCCTTGTCAAAA +GCGATCATATTTGCATTGGTTATCATGCAAATAACTCGACAGAGCAGGTTGACACAATAA +TGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAAAAGACACACAACGGAA +AGCTCTGCGATCTAAATGGAGTGAAGCCTCTGATTTTAAAAGATTGTAGTGTAGCAGGAT +GGCTCCTCGGAAATCCATTGTGTGACGAATTCACCAATGTGCCAGAATGGTCTTACATAG +TAGAGAAGGCCAATCCAGCCAATGACCTCTGTTACCCAGGGAATTTCAACGATTATGAAG +AATTGAAACACCTATTGAGCAGGATAAACCATTTTGAGAAAATACAGATCATCCCCAAAG +ATTCTTGGTCAGATCATGAAGCCTCATTGGGGGTGAGCGCAGCATGTTCATACCAAGGAA +ATTCCTCCTTCTTCAGAAATGTGGTGTGGCTTATCAAAAAGGACAATGCATACCCAACAA +TAAAGAAAGGCTACAATAATACCAACCGAGAAGATCTCTTGATACTGTGGGGGATCCACC +ATCCTAATGATGAGGCAGAGCAGACAAGGCTCTACCAAAACCCAACTACCTATATTTCCA +TTGGGACTTCAACACTAAACCAGAGATTGGTACCAAAAATAGCCACTAGATCCAAAATAA +ACGGGCAAAGTGGCAGGATAGATTTCTTCTGGACAATTTTAAAACCGAATGACGCAATCC +ACTTCGAGAGTAATGGAAATTTCATTGCTCCAGAATACGCATACAAAATTGTCAAGAAGG +GAGACTCCACAATCATGAGAAGTGAAGTGGAATATGGTAACTGCAACACCAGGTGTCAGA +CTCCAATAGGGGCGATAAACTCTAGTATGCCATTCCACAACATACACCCTCTCACCATCG +GAGAATGTCCCAAATATGTGAAATCAAACAAATTAGTCCTTGCAACTGGGCTCAGAAATA +GTCCTCAAAGAGAGAGAAGAAGAAAAAGAGGACTGTTTGGAGCTATAGCAGGTTTTATAG +AGGGAGGATGGCAGGGGATGGTAGATGGTTGGTATGGGTACCACCACAGCAATGAACAGG +GGAGTGGTTATGCTGCAGACAAAGAATCTACTCAAAAGGCGATAGACGGAGTCACCAATA +AGGTCAATTCGATCATTGACAAAATGAACACTCAGTTTGAGGCTGTAGGAAGGGAATTTA +ATAACTTAGAGAGGAGAATAGAAAATTTAAACAAGAAGATGGAAGACGGATTCCTAGATG +TCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAGAATGAGAGAACTCTAGACTTCC +ATGACTCAAATGTCAAGAACCTTTACGATAAGGTCCGACTACAGCTTAAGGATAATGCAA +AAGAGCTGGGAAACGGTTGTTTCGAGTTCTATCACAAATGTAATAATGAATGTATGGAAA +GTGTAAGAAACGGGACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGATTAAAAAGAG +AGGAAATAAGTGGAGTAAAACTGGAATCAATAGGAATCTACCAAATACTGTCAATTTATT +CAACAGTGGCGAGTTCCCTAGTGCTGGCAATCATGATGGCTGGTCTATCTTTATGGATGT +GTTCCAACGGGTCGTTACAGTGCAGAATTTGCATTTAAGTTTGTGAATTCAGATTGTAGT +TA +>A/muscovyduck/Vietnam/LBM567/2014 +ATGGAGAAAATAGTTCTCTCTCTTGCAACAATCAGCCTTGTCAAAAGCGATCATATTTGC +ATTGGTTATCATGCAAATAACTCGACAGAGCAGGTTGACACAATAATGGAAAAGAACGTT +ACTGTTACACATGCCCAAGACATACTGGAAAAGACACACAACGGGAAGCTCTGCGATCTA +AACGGAGTGAAGCCTCTGATTTTAAAAGATTGTAGTGTAGCAGGATGGCTCCTCGGAAAT +CCATTGTGTGATGAATTCACCAATGTGCCAGAATGGTCTTACATAGTAGAGAAGGCCAAT +CCAGCCAATGACCTCTGTTACCCAGGGAATTTCAACGATTATGAAGAATTGAAACACCTA +TTGAGCAGGATAAACCATTTTGAGAAAATACAGATCATCCCCAAAGATTCTTGGTCAGAT +CATGAAGCCTCATTGGGGGTGAGCGCAGCATGTTCATACCAGGGAAATTCCTCCTTCTTC +AGAAATGTGGTGTGGCTTATCAAAAAGGACAATGCATACCCAACAATAAAGAAAGGCTAC +AATAATACCAATCGAGAAGATCTCTTGATACTGTGGGGGATCCACCATCCTAATGATGAG +GCAGAGCAGACAAAGCTATACCAAAACCCAACTACCTATATTTCCATTGGGACTTCAACA +CTAAACCAGAGATTGGTACCAAAAATAGCCACTAGATCAAAAATAAACGGGCAAAGTGGC +AGGATAGATTTCTTCTGGACAATTTTAAAACCGAAAGACGCAATCCACTTCGAGAGTAAT +GGAAATTTCATTGCTCCAGAATATGCATACAAAATTGTCAAGAAGGGAGACTCCACAATC +ATGAGAAGTGAAGTGGAATATGGTAACTGCAACACCAGGTGCCAGACTCCAATAGGGGCG +ATAAACTCTAGTATGCCATTCCACAACATACACCCTCTCACCATCGGAGAATGTCCCAAA +TATGTGAAATCAAACAAATTAGTCCTTGCAACTGGGCTCAGAAATAGTCCTCAAAGAGAG +AGAAGAAGAAAAAGAGGACTGTTTGGAGCTATAGCAGGTTTTATAGAGGGAGGATGGCAG +GGAATGGTAGATGGTTGGTATGGGTACCACCACAGCAATGAACAGGGGAGTGGTTACGCT +GCAGACAAAGAATCTACTCAAAAGGCGATAGACGGAGTCACCAATAAGGTCAATTCGATC +ATTGACAAAATGAACACTCAGTTTGAGGCTGTAGGAAGGGAATTTAATAACTTGGAGAGG +AGAATAGAAAATTTAAACAAGAAGATGGAAGACGGATTCCTAGATGTCTGGACTTATAAT +GCTGAACTTCTGGTTCTCATGGAGAATGAGAGAACTCTAGACTTCCATGACTCAAATGTC +AAGAACCTTTACGATAAGGTCCGACTACAGCTTAAGGATAATGCAAAAGAGCTGGGAAAC +GGTTGTTTCGAGTTCTATCACAAATGTAATAATGAATGTATGGAAAGTGTAAGAAACGGG +ACGTATGACTACCCACAGTATTCAGAAGAAGCAAGATTAAAAAGAGAGGAAATAAGTGGA +GTAAAACTGGAATCAATAGGAATCTACCAAATACTGTCAATTTATTCAACAGTGGCGAGT +TCCCTAGTGCTGGCAATCATGATGGCTGGTCTATCTTTATGGATGTGTTCCAACGGGTCG +TTACAGTGCAGAATTTGCATTTAAGTTTGTGAATTCAGATTGTAGTTA +>A/duck/Vietnam/LBM638/2014 +CAATCTGTCAAAATGGAGAAAATAGTGCTTCTTCTTGCAGTGGTTAGCCTTGTTAAAAGT +GATCAGATTTGCATTGGTTACCATGCAAATAACTCGACAGAGCAGGTTGACACGATAATG +GAAAAAAACGTCACTGTTACACATGCCCAAGACATACTGGAAAAGACACACAACGGGAGG +CTCTGCGATCTGAATGGAGTGAAACCTCTGATTTTAAGGGATTGTAGTGTAGCTGGATGG +CTCCTTGGAAACCCAATGTGCGACGAGTTCATCAGAGTGCCGGAATGGTCTTACATAGTG +GAGAGGGCTAACCCATCCAATGACCTCTGTTACCCGGGGAACCTCAATGACTATGAAGAA +CTGAAACACCTATTAAGCAGAATAAATCATTTTGAGAAGACTCTGATCATCCCCAAGAGT +TCTTGGCCCGATCATGAAACATCATTAGGGGTGAGCGCAGCATGTCCATACCAGGGAATG +CCCTCCTTTTTCAGAAATGTGGTATGGCTTATCAAGAAGAACGATACATACCCAACAATA +AAGATAAGCTACAATAATACCAATAGGGAAGATCTTTTGATACTGTGGGGGATTCATCAT +TCCAACAACGCAGCAGAGCAGACAGAGCTCTATAAAAACCCAAACACCTATGTTTCCGTT +GGGACATCAACATTAAACCAGAGATTGGTGCCCAAAATAGCTACTAGATCCCAAGTAAAC +GGGCAACGTGGAAGAATGGATTTCTTCTGGACAATTTTAAAACCGAATGATGCAATCCAC +TTCGAGAGTAATGGAAATTTTATTGCTCCAGAGTATGCATACAAAATTGTCAAGAAAGGG +GACTCAACAATCATGAAAAGTGAAATGGAATATGGCCACTGCAACACCAAATGTCAAACT +CCAATAGGGGCGATAAACTCTAGTATGCCATTCCACAATATACACCCTCTCACTATCGGG +GAATGCCCCAAATACGTGAAATCAAACAAATTAGTCCTTGCGACTGGGCTCAGAAATAAT +CCTCTAAGAGAGAGGAGAAGAAAAAGAGGACTATTTGGAGCTATAGCAGGGTTTATAGAG +GGAGGATGGCAAGGGATGGTAGATGGTTGGTATGGGTACCACCATAGCAATGAACAGGGG +AGTGGGTACGCTGCAGACAAAGAATCCACCCAAAAGGCAATAGATGGAGTTACCAATAAG +GTCAACTCGATCATTGACAAGATGAACACTCAATTTGAGGCCGTTGGAAGGGAATTTAAT +AACTTGGAACGGAGAATAGAGAATTTAAATAAGAAAATGGAAGACGGATTCCTAGATGTC +TGGACTTATAATGCTGAACTTCTAGTTCTCATGGAAAATGAGAGAACTCTAGATTTCCAT +GACTCAAATGTCAAGAACCTTTACGACAAAGTCCGACTACAGCTTAGGGATAATGCAAAG +GAGCTGGGTAATGGTTGTTTCGAGTTCTATCACAAATGTGATAATGAATGTATGGAAAGT +GTAAGAAATGGTACGTATGACTACCCTCAGTATTCAGAAGAAGCAAGATTAAAAAGAGAA +GAAATAAGCGGAGTGAAATTGGAATCAATAGGAACTTACCAAATACTGTCAATTTATTCA +ACAGTGGCGAGTTCCCTAGCACTGGCAATCATTGTGGCTGGTCTATCTTTATGGATGTGC +TCCAATGGGTCGTTACAATGCAGAATTTGCATTTAAATTTGTGAGCTCAGATTGTAGTTA +>A/muscovyduck/Vietnam/LBM636/2014 +TCAATCTGTCAAAATGGAGAAAATAGTGCTTCTTCTTGCAGTGGTTAGCCTTGTTAAAAG +TGATCAGATTTGCATTGGTTACCATGCAAATAACTCGACAGAGCAGGTTGACACGATAAT +GGAAAAAAACGTCACTGTTACACATGCCCAAGACATACTGGAAAAGACACACAACGGGAG +GCTCTGCGATCTGAATGGAGTGAAACCTCTGATTTTAAGGGATTGTAGTGTAGCTGGATG +GCTCCTTGGAAACCCAATGTGCGACGAGTTCATCAGAGTGCCGGAATGGTCTTACATAGT +GGAGAGGGCTAACCCATCCAATGACCTCTGTTACCCGGGGAACCTCAATGACTATGAAGA +ACTGAAACACCTATTAAGCAGAATAAATCATTTTGAGAAGACTCTGATCATCCCCAAGAG +TTCTTGGCCCGATCATGAAACATCATTAGGGGTGAGCGCAGCATGTCCATACCAGGGAAT +GCCCTCCTTTTTCAGAAATGTGGTATGGCTTATCAAGAAGAACGATACATACCCAACAAT +AAAGATAAGCTACAATAATACCAATAGGGAAGATCTTTTGATACTGTGGGGGATTCATCA +TTCCAACAACGCAGCAGAGCAGACAGAGCTCTATAAAAACCCAAACACCTATGTTTCCGT +TGGGACATCAACATTAAACCAGAGATTGGTGCCCAAAATAGCTACTAGATCCCAAGTAAA +CGGGCAACGTGGAAGAATGGATTTCTTCTGGACAATTTTAAAACCGAATGATGCAATCCA +CTTCGAGAGTAATGGAAATTTTATTGCTCCAGAGTATGCATACAAAATTGTCAAGAAAGG +GGACTCAACAATCATGAAAAGTGAAATGGAATATGGCCACTGCAACACCAAATGTCAAAC +TCCAATAGGGGCGATAAACTCTAGTATGCCATTCCACAATATACACCCTCTCACTATCGG +GGAATGCCCCAAATACGTGAAATCAAACAAATTAGTCCTTGCGACTGGGCTCAGAAATAA +TCCTCTAAGAGAGAGGAGAAGAAAAAGAGGACTATTTGGAGCTATAGCAGGGTTTATAGA +GGGAGGATGGCAAGGGATGGTAGATGGTTGGTATGGGTACCACCATAGCAATGAACAGGG +GAGTGGGTACGCTGCAGACAAAGAATCCACCCAAAAGGCAATAGATGGAGTTACCAATAA +GGTCAACTCGATCATTGACAAGATGAACACTCAATTTGAGGCCGTTGGAAGGGAATTTAA +TAACTTGGAACGGAGAATAGAGAATTTAAATAAGAAAATGGAAGACGGATTCCTAGATGT +CTGGACTTATAATGCTGAACTTCTAGTTCTCATGGAAAATGAGAGAACTCTAGATTTCCA +TGACTCAAATGTCAAGAACCTTTACGACAAAGTCCGACTACAGCTTAGGGATAATGCAAA +GGAGCTGGGTAATGGTTGTTTCGAGTTCTATCACAAATGTGATAATGAATGTATGGAAAG +TGTAAGAAATGGTACGTATGACTACCCTCAGTATTCAGAAGAAGCAAGATTAAAAAGAGA +AGAAATAAGCGGAGTGAAATTGGAATCAATAGGAACTTACCAAATACTGTCAATTTATTC +AACAGTGGCGAGTTCCCTAGCACTGGCAATCATTGTGGCTGGTCTATCTTTATGGATGTG +CTCCAATGGGTCGTTACAATGCAGAATTTGCATTTAAATTTGTGAGCTCAGATTGTAGTT +A +>A/muscovyduck/Vietnam/OIE-3509/2011 +TCCAATCTGTCAAAATGGAGAAAATAGTGCTTCTTTTTGCGATAGTCAGTCTTGTTAAAA +GTGATCAGATTTGCATTGGCTACCATGCAAACAACTCGACAAAGCAGGTTGACACGATAA +TGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTAGAAAAGACACATAACGGAA +AGCTCTGTGACTTAGATGGAGTTAGGCCTCTAATTTTGAGAGATTGTAGTGTAGCTGGAT +GGCTTCTCGGAAACCCAATGTGTGATGAATTCATCAATGTGCCAGAATGGTCTTATATAG +TGGAGAAGGCCAATCCAGTCAATGACCTCTGTTACCCAGGAGTTTTCAATGACTATGAAG +AATTGAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCCCCAAGA +GTTCTTGGCCCAGTCATGAAGCCTCATTGGGGGTGAGCGCAGCATGTCCATACCAGGGAA +AGTCTTCTTTTTTCCGAAATGTGGTGTGGCTTATCAAAAAGAACAGTACATACCCAACAA +TAAAGAGGAGTTACAATAATACCAACCAAGAAGATCTTTTGGTAATGTGGGGAATCCACC +ACCCTAATGATGCAGCAGAACAGACAAAACTCTATCAAAATCCAACCACCTATATCTCCG +TTGGGACGTCAACACTAAACCAGAGATTGACACCAAGAATAGCTACTAGATCCAAAGTAA +ACGGACAAAGTGGGAGGATGGAGTTCTTTTGGACAATCTTAAAACCGAATGATGCAATCA +ACTTCGAGAGTAATGGAAATTTCATTGCTCCAGAATATGCATACAAAATTATCAAGAAAG +GGGACTCAACAATTATGAAAAGTGAATTGGAATATGGTAACTGCAACACCAAGTGTCAAA +CTCCAATGGGGGCGATAAACTCTAGTATGCCATTCCACAATATACATCCTCTCACTATTG +GAGAATGCCCCAAATATGTGAAATCAACCAGATTAGTCCTTGCGACTGGGCTCAGAAATA +GCCCTCAAAGAGAGGAAAGAAGAAAAAAGAGAGGATTGTTTGGAGCTATAGCAGGATTTA +TAGAAGGAGGATGGCAGGGGATGGTAGACGGTTGGTATGGGTACCATCATAGCAATGAGC +AGGGAAGCGGGTACGCTGCAGACAAAGAATCCACTCAAAAGGCTATAGATGGAGTCACCA +ATAAGGTCAACTCGATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAAT +TTAACAACTTAGAAAGAAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGGTTCCTAG +ATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAATGAGAGAACTCTAGACT +TCCATGACTCAAATGTAAAGAACCTTTACGACAAGGTCCGATTACAGCTTAGGGATAATG +CAAAGGAGCTGGGTAACGGTTGTTTCGAGTTCTATCACAAATGTGATAATGAATGCATGG +AAAGTGTGAGAAACGGGACATATGACTACCCGCAGTATTCAGAAGAAGCAAGATTAAAAA +GAGAGGAGATAAGTGGAGTGAAATTGGAATCGATAGGAGTTTACCAAATACTGTCAATTT +ATTCTACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTAGCTGGTCTATCCTTGTGGA +TGTGCTCCAATGGGTCGTTACAATGCAGAATTTGCATTTAAATTTGTGAGTTCAGATTGT +AGGTAA +>A/chicken/SocTrang/1/2012 +TCCAATCTGTCAAAATGGAGAAAATAGTGCTTCTTTTTGCGATAGTCAGTCTTGTCAAAA +GTGACCAGATTTGCATTGGCTACCATGCAAACAACTCGACAGAGAAGGTTGACACGATAA +TGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTAGAAAAGACACATAACGGAA +AGCTCTGTGACTTAGATGGAGTTAGGCCTCTAATTTTGAGAGATTGTAGTGTAGCTGGAT +GGCTTCTCGGAAACCCAATGTGTGACGAATTCATCAATGTGCCAGAATGGTCTTATATAG +TGGAGAAGGCCAATCCAGTCAATGACCTCTGTTACCCAGGAGTTTTCAATGACTATGAAG +AATTGAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCCCCAAGA +GTTCTTGGCCCAGTCATGAAGCCTCAATGGGGGTGAGCGCAGCATGTCCATACCAGGGAC +AGTCCTCTTTTTTCCGAAATGTGGTGTGGCTTATCAAAAAGAACAGTACATACCCAACAA +TAAAGAGGAGTTACAATAATACCAACCAAGAAGATCTTTTAGTAATGTGGGGGATCCACC +ATCCTAATGATGCAGCAGAACAGACAAAACTCTATCAAAATCCAACCACCTATATCTCCG +TTGGGACGTCAACACTAAACCAGAGACTGACACCAAGAATAGCTACTAGATCCAAAATAA +ACGGACAAAGTGGGAGGATGGAGTTCTTTTGGACAATCTTAAAACCGAATGATGCAATCA +ACTTCGAGAGTAATGGAAATTTCATTGCTCCAGAATATGCATACAAAATTGTCAAGAAAG +GGGACTCAACAATTATGAGAAGTGAATTGGAATATGGTAACTGCAACACCAAGTGTCAAA +CTCCAATGGGGGCGATAAACTCTAGTATGCCATTCCACAATATACATCCTCTCACTATTG +GAGAATGCCCCAAATATGTGAAATCAACCAGATTAGTCCTTGCGACTGGGCTCAGAAATA +GCCCTCAAAGAGAGGAAAGAAGAAAAAAGAGAGGATTATTTGGAGCTATAGCAGGGTTTA +TAGAAGGAGGATGGCAGGGGATGGTAGATGGTTGGTATGGATACCATCATAGCAATGAGC +AGGGAAGCGGGTACGCTGCAGACAAAGAATCCACTCAAAAGGCTATAGATGGAGTCACCA +ATAAGGTCAACTCGATCATTGACAAAATGAACACTCAGTTTGAGGCTGTTGGAAGGGAAT +TTAACAACTTAGAAAGAAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGGTTCCTAG +ATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAATGAAAGAACTCTAGACT +TCCATGACTCAAATGTAAAGAACCTTTACGACAAGGTCCGATTGCAGCTTAGGGATAATG +CCAAGGAGCTGGGTAACGGTTGTTTTGAGTTCTATCACAAATGTGATAATGAATGCATGG +AAAGTGTGAGAAACGGGACATATGACTACCCGCAGTATTCAGAAGAAGCAAGATTAAAAA +GAGAGGAGATAAGTGGAGTGAAATTGGAATCGATAGGAGTTTACCAAATACTGTCAATTT +ATTCTACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTAGCTGGTCTATCCTTATGGA +TGTGCTCCAATGGGTCGTTACAATGCAGAATTTGCATTTAAATTTGTGAG +>A/duck/Vietnam/LBM136/2012 +ATGGAGAAAATAGTGCTTCTTTTTGCAACAATTAGCCTTGTCAAAAGTGATCATATTTGC +ATTGGTTATCATGCAAATAACTCGACAGAGCAGGTTGACACAATAATGGAAAAGAACGTT +ACTGTTACACATGCCCAAGACATACTGGAAAAGACACACAACGGGAAGCTCTGCGATCTA +AATGGAGTGAAGCCTCTGATTTTAAAAGATTGTAGTGTAGCAGGATGGCTCCTCGGAAAC +CCAATGTGTGACGAATTCATCAATGTGCCAGAATGGTCTTACATAGTAGAGAAGGCCAAT +CCAGCCAATGACCTCTGTTACCCAGGAAACTTCAACGATTATGAAGAATTGAAACACCTA +TTGAGCAGGATAAACCATTTTGAGAAAATACAGATCATCCCCAAAGATTCTTGGTCAGAT +CATGAAGCCTCATTGGGGGTGAGTGCAGCATGTCCATACCAGGGAAATTCCTCCTTCTTC +AGAAATGTGGTGTGGCTTATCAAAAAGGACAATGCATACCCAACAATAAAGAAAGGCTAC +AATAATACCAATCAAGAAGATCTCTTGGTACTGTGGGGGATTCACCATCCTAATGATGAG +GCAGAGCAGACAAAGCTCTATCAAAACCCAACCACCTATATTTCCATTGGGACATCAACA +CTAAACCAAAGATTGGTACCAAAAATAGCCACTAAGTCCAAAATAAACGGGCAAAGTGGC +AGGATAGATTTCTTCTGGACAATTTTAAAACCGAATGATGCAATCCACTTCGAGAGTAAT +GGAAATTTCATTGCTCCAGAATATGCATACAAAATTGTCAAGAAAGGAGACTCAACAATT +ATGAAAAGTGAAGTGGAATATGGTAACTGCAACACCAGGTGTCAGACTCCGATAGGGGCG +ATAAACTCCAGTATGCCATTCCACAACATACACCCTCTCACCATCGGAGAATGTCCCAAA +TATGTGAAATCAAACAAACTAGTCCTTGCGACTGGGCTCAGAAATAGTCCTCAAAGAGAG +AGAAGAAGAAAAAGAGGATTGTTTGGAGCTATAGCAGGTTTTATAGAGGGAGGATGGCAG +GGAATGGTAGATGGTTGGTATGGGTACCACCACAGCAATGAGCAGGGGAGTGGGTACGCG +GCAGACAAAGAATCTACTCAAAAGGCAATAGACGGAGTCACCAATAAGGTCAACTCGATC +ATTGACAAAATGAACACTCAGTTTGAGGCCGTAGGAAGGGAATTTAATAACTTAGAGAGG +AGAATAGAGAATTTGAACAAGAAGATGGAAGACGGATTCCTAGATGTCTGGACTTATAAT +GCTGAACTTCTGGTTCTCATGGAAAATGAGAGAACTCTAGACTTCCATGACTCAAATGTC +AGGAACCTTTACGACAAGGTCAGACTACAGCTCAAGGATAATGCAAAAGAGCTGGGTAAC +GGTTGTTTCGAGTTCTATCACAAATGTAATAATGAATGTATGGAAAGTGTAAGAAACGGA +ACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGATTAAAAAGAGAGGAAATAAGTGGA +GTAAAATTGGAATCAATAGGAATCTACCAAATACTGTCAATTTATTCAACAGTGGCGAGT +TCCCTAGTACTGGCAATCATGATGGCTGGTCTATCTTTATGGATGTGTTCCAACGGTTCG +TTACAGTGCAGAATTTGCATTTAAGTTTGTGAGTTCAGATTGTAGTTA +>A/Muscovyduck/Vietnam/LBM113/2012 +TTCACTCTGTCAAAATGGAGAAAATAGTGCTTCTTTTTGCAACAATTAGCCTTGTCAAAA +GCGATCATATTTGCATTGGTTATCATGCAAATAACTCGACAGAGCAGGTTGACACAATAA +TGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAAAAGACACACAACGGGA +AGCTCTGCGATCTAAATGGAGTGAAGCCTCTGATTTTAAAAGATTGTAGTGTAGCAGGAT +GGCTCCTCGGAAACCCAATGTGTGACGAATTCATCAATGTGCCAGAATGGTCTTACATAG +TAGAGAAGGCCAATCCAGCCAATGACCTCTGTTACCCAGGAAACTTCAACGATTATGAAG +AATTGAAACACCTATTGAGCAGGATAAACCATTTTGAGAAAATACAGATCATCCCCAAAG +ATTCTTGGTCAGATCATGAAGCCTCATTGGGGGTGAGTGCAGCATGTCCATACCAGGGAA +ATTCCTCCTTCTTCAGAAATGTGGTATGGCTTATCAAAAAGGACAATGCATACCCAACAA +TAAAGAAAGGCTACAATAATACCAATCAAGAAGATCTCTTGGTACTGTGGGGGATTCACC +ATCCTAATGATGAGGCAGAGCAGACAAAGCTCTATCAAAACCCAACCACCTATATTTCCA +TTGGGACATCAACACTGAACCAGAGATTGGTACCAAAAATAGCCACTAGGTCCAAAATAA +ACGGGCAAAGTGGCAGGATAGATTTCTTCTGGACAATTTTAAAACCGAATGATGCAATCC +ACTTCGAGAGTAATGGAAATTTCATTGCTCCAGAATATGCATACAAAATTGTCAAGAAAG +GAGACTCAACAATTATGAAAAGTGAAGTGGAATATGGTAACTGCAACACCAGGTGTCAGA +CTCCGATAGGGGCGATAAACTCCAGTATGCCATTCCACAACATACACCCTCTCACCATCG +GAGAATGTCCCAAATACGTGAAATCAAACAAACTAGTCCTTGCGACTGGGCTCAGAAATA +GTCCTCAAAGAGAGAGAAGAAGAAAAAGAGGATTGTTTGGAGCTATAGCAGGTTTTATAG +AGGGAGGATGGCAGGGAATGGTAGATGGTTGGTATGGGTACCACCACAGCAATGAGCAGG +GGAGTGGGTACGCGGCAGACAAAGAATCTACTCAAAAGGCAATAGACGGAGTCACCAATA +AGGTCAACTCGATCATTGACAAAATGAACACTCAGTTTGAGGCCGTAGGAAGGGAATTTA +ATAACTTAGAGAGGAGAATAGAGAATTTGAACAAGAAGATGGAAGACGGATTCCTAGATG +TCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAATGAGAGAACTCTAGACTTCC +ATGACTCAAATGTCAGGAACCTTTACGACAAGGTCAGACTACAGCTCAAGGATAATGCAA +AAGAGCTGGGTAACGGTTGTTTCGAGTTCTATCACAAATGTAATAATGAATGTATGGAAA +GTGTAAGAAACGGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGATTAAAAAGAG +AGGAAATAAGTGGAGTAAAATTGGAATCAATAGGAATCTACCAAATACTGTCAATTTATT +CAACAGTGGCGAGTTCCCTAGTACTGGCAATCATGATGGCTGGTCTATCTTTATGGATGT +GTTCCAACGGTTCGTTACAGTGCAGAATTTGCATTTAAGTTTGTGAGTTCAGATTGTAGT +T +>A/whooperswan/Hokkaido/3/2011 +TTCACTCTGTCAAAATGGAGAAAATAGTGCTTCTCTTTACAACAATCAGCCTTGTTAAAA +GCGATCATATTTGCATTGGTTATCATGCAAATAACTCGACAGAGCAGGTTGACACAATAA +TGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAAAAGACACACAACGGGA +AGCTCTGCGATCTAAATGGAGTGAAGCCTCTGATTTTAAAAGATTGTAGTGTAGCGGGAT +GGCTCCTCGGAAACCCATTGTGTGACGAATTCATCAATGTGCCAGAATGGTCTTACATAG +TAGAGAAGGCCAATCCAGCCAATGACCTCTGTTACCCAGGGAATTTCAACGATTATGAAG +AATTGAAACACCTATTGAGCAGGATAAACCATTTTGAGAAAATACAGATCATCCCCAAAG +ACTCTTGGTCAGATCATGAAGCCTCATTGGGGGTGAGCGCAGCATGTTCATACCAGGGAA +ATTCCTCCTTCTTCAGAAATGTGGTATGGCTTATCAAAAAGGACAATGCATACCCAACAA +TAAAGAAAGGCTACAATAATACCAACCAAGAAGATCTCTTGGTACTGTGGGGGATTCACC +ACCCTAATGATGAGGCAGAGCAGACAAGGCTCTATCAAAACCCAACCACCTATATTTCCA +TTGGGACATCAACACTAAACCAGAGATTGGTACCAAAAATAGCCACTAGATCCAAAATAA +ACGGGCAAAGGGGCAGGATAGATTTCTTCTGGACAATTTTAAAGCCGAATGATGCAATCC +ACTTCGAGAGTAATGGAAATTTCATTGCTCCAGAATATGCATACAAAATTGTCAAGAAAG +GAGACTCCACAATTATGAAAAGTGAAGTGGAATATGGTAACTGCAACACCAGGTGTCAGA +CTCCGATAGGGGCGATAAACTCTAGTATGCCATTCCACAACATACACCCTCTCACCATCG +GAGAATGTCCCAAATATGTGAAATCAAACAAATTAGTCCTTGCGACTGGGCTCAGAAATA +GTCCTCAAAGAGAGAGAAGAAGAAAAAGAGGACTGTTTGGAGCTATAGCAGGTTTTATAG +AGGGAGGATGGCAGGGAATGATAGATGGTTGGTATGGGTACCACCACAGCAATGAGCAGG +GGAGTGGGTACGCTGCAGACAAAGAATCTACTCAAAAGGCAATAGACGGAGTCACCAATA +AGGTCAACTCGATCATTGACAAAATGAACACTCAGTTTGAGGCCGTAGGAAGGGAATTTA +ACAACTTAGAGAGGAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGATTCCTAGATG +TTTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAATGAGAGAACTCTAGATTTCC +ATGACTCAAATGTCAAGAACCTTTACGATAAGGTCAGACTACAGCTTAAGGATAATGCAA +AAGAGTTGGGTAACGGTTGTTTCGAGTTCTATCACAAATGTAATAATGAATGTATGGAAA +GTGTAAGAAACGGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAAACTAAAAAGAG +AGGAAATAAGTGGAGTAAAATTGGAATCAATAGGAATCTACCAAATACTGTCAATTTATT +CAACAGTGGCGAGTTCCCTAGTGCTGGCAATCATGATGGCTGGTCTGTCTTTATGGATGT +GTTCCAACGGATCGTTACAGTGCAGAATTTGCATTTAAGTCTGTGAGTTCAAATTGTGGT +TA +>A/hoodedcrane/Kagoshima/4612J001/2010 +TTCACTCTGTCAAAATGGAGAAAATAGTGCTTCTCTTTACAACAATCAGCCTTGTTAAAA +GCGATCATATTTGCATTGGTTATCATGCAAATAACTCGACAGAGCAGGTTGACACAATAA +TGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAAAAGACACACAACGGGA +AGCTCTGCGATCTAAATGGAGTGAAGCCTCTGATTTTAAAAGATTGTAGTGTAGCGGGAT +GGCTCCTCGGGAACCCATTGTGTGACGAATTCATCAATGTGCCAGAATGGTCTTACATAG +TAGAGAAGGCCAAGCCAGCCAATGACCTCTGTTACCCAGGGAATTTCAACGATTATGAAG +AATTGAAACACCTATTGAGCAGGATAAACCATTTTGAGAAAATACAGATCATCCCCAAAG +ACTCTTGGTCGGATCATGAAGCCTCATTGGGGGTGAGCGCAGCATGTTCATACCAAGGAA +ATTCCTCCTTCTTCAGAAATGTGGTATGGCTTATCAAAAAGGACAATGCATACCCAACAA +TAAAGAAAGGCTACAATAATACCAACCAAGAAGATCTCTTGGTACTGTGGGGGATTCACC +ATCCTAATGATGAGGCAGAGCAGACAAGGCTCTATCAAAACCCAACCACCTATATTTCCA +TTGGGACATCAACACTAAACCAGAGATTGGTACCAAAAATAGCCACTAGATCCAAAATAA +ACGGGCAAAGTGGCAGGATAGATTTCTTCTGGACAATTTTAAAACCGAATGATGCAATCC +ACTTCGAGAGTAATGGAAATTTCATTGCTCCAGAATATGCATACAAAATTGTCAAGAAAG +GAGACTCCACAATTATGAAAAGTGAAGTGGAATATGGTAACTGCAACACCAGGTGTCAGA +CTCCGATAGGGGCGATAAACTCTAGTATGCCATTCCACAACATACACCCTCTCACCATCG +GAGAATGTCCCAAATATGTGAAATCAAACAAATTAGTCCTTGCGACTGGGCTCAGAAATA +GTCCTCAAAGAGAGAGAAGAAGAAAAAGAGGACTGTTTGGAGCTATAGCAGGTTTTATAG +AGGGAGGATGGCAGGGAATGGTAGATGGTTGGTATGGGTACCACCACAGCAATGAGCAGG +GGAGTGGGTACGCTGCAGACAAAGAATCTACTCAAAAGGCAATAGACGGAGTCACCAATA +AGGTCAACTCGATCATTGACAAAATGAACACTCAGTTTGAGGCCGTAGGAAGGGAATTTA +ATAACTTAGAGAGGAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGATTCCTAGATG +TTTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAATGAGAGAACTCTAGATTTCC +ATGACTCAAATGTCAAGAACCTTTACGATAAGGTCAGACTACAGCTTAAGGATAATGCAA +AAGAGTTGGGTAACGGTTGTTTCGAGTTCTATCACAAATGTAATAATGAATGTATGGAAA +GTGTAAGAAACGGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAAAAGAG +AGGAAATAAGTGGAGTAAAATTGGAATCAATAGGAATCTACCAAATACTGTCAATTTATT +CAACAGTGGCGAGTTCCCTAGTGCTGGCAATCATGATGGCTGGTCTGTCTTTATGGATGT +GTTCCAACGGATCGTTACAGTGCAGAATTTGCATTTAAGTTTGTGAGTTCAAATTGTGGT +TA +>A/muscovyduck/Vietnam/OIE-559/2011 +AATCTGTCAAAATGGAGAAAATAGTGCTTCTTTTTGCGATAGTCAATCTTGTTAAAAGTG +ATCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACACGATAATGG +AAAAAAACGTTACTGTTACACATGCCCAAGACATACTGGAAAAGACACATAACGGGAAGC +TCTGTGACCTAGATGGAATTAGGCCTCTAATTTTGAGGGATTGTAGTGTAGCTGGATGGC +TTCTCGGAAACCCAATGTGTGACGAATTCATCAATGTGCCAGAATGGTCTTACATAGTGG +AGAAGGCCAATCCAGTCAATGACCTCTGTTACCCAGGAGTTTTCAATGACTATGAAGAAT +TGAAACACCTATTGAGCCGAATAAACCATTTTGAGAAAATTCAGATCATCCCCAAGAGTT +CTTGGCCCAGTCATGAAGCCTCATTGGGGGTGAGCGCAGCATGTCCATACCAGGGAAATT +CCTCTTTTTTCAGAAATGTGGTATGGCTTATCAAAAAGAACAGTACATACCCAACAATAA +AGAGGAGTTACAATAATACAGGCCAAGAAGATCTTTTGGTAATGTGGGGGATCCACCATC +CTAATGATGCGGCAGAGCAAACAAAGCTCTACCAAAATCCAACCACCTATATCTCCGTTG +GGACATCAACGCTAAACCAGAGATTGACACCAAGAATAGCTACTAGATCCAAAGTAAACG +GGCAAAGTGGGAGGATGGAGTTCTTCTGGACAATTTTAAAACCGAATGATGCAATCAACT +TCGAGAGTAATGGAAATTTCATTGCTCCAGAATATGCATACAAAATTGTCAAGAAAGGGG +ACTCAACAATTATGAAAAGTGAATTGGAATATGGCAACTGCAACACCAAGTGTCAAACTC +CAATGGGGGCGATAAACTCTAGCATGCCATTCCACAATATACATCCTCTCACTATTGGGG +AATGCCCCAAATATGTGAAATCAAACAGACTAGTACTTGCGACCGGGCTCAGAAATAGCC +CTCAAAGAGAGGGAAGAAGAAAAAAGAGAGGATTATTTGGAGCTATAGCAGGTTTTATAG +AGGGAGGATGGCAGGGGATGGTAGATGGTTGGTATGGGTACCACCATAGCAATGAGCAGG +GAAGCGGGTACGCTGCAGACAAAGAATCCACTCAAAAGGCTATAGATGGAGTCACCAATA +AGGTCAACTCGATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTCA +ACAACTTAGAAAGAAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGGTTCCTAGATG +TCTGGACCTATAATGCTGAACTTCTGGTTCTCATGGAAAATGAGAGAACTCTAGACTTCC +ATGACTCAAATGTAAAGAACCTTTACGACAAGGTCCGATTACAGCTTAGGGATAATGCAA +AGGAGCTGGGTAACGGTTGTTTCGAGTTCTATCACAAATGTGACAATGAATGTATGGAAA +GTGTGAGAAACGGGACGTATGACTACCCGCAGTATTCAGAAGAAGCGAGATTAAAAAGAG +AGGAAATAAGTGGAGTGAAATTGGAATCGATAGGAGTTTACCAAATACTGTCAATTTATT +CTACAGTGGCGAGTTCCCTAGCATTGGCAATCATGGTAGCTGGTCTATCCTTATGGATGT +GCTCCAATGGGTCGTTACAATGCAGAATCTGCATTTAAATCTGTGAGTTCAGATTGTAGG +TAAAAACAC +>A/quail/Vietnam/CVVI_49/2010 +AGCAAAAGCAGGGGTTCAATCTGTCAAAATGGAGAAAATAGTGCTTCTTTTTGCGATAGT +CAGTCTTGTTAAAAGTGATCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCA +GGTTGACACGATAATGGAAAAGAACGTTACTGTCACACATGCCCAAGACATACTGGAAAA +GACACATAACGGGAAGCTCTGTGACCTAGATGGAGTTAAGCCTCTAATTTTGAGGGATTG +TAGTGTAGCTGGATGGCTTCTCGGAAACCCAATGTGTGACGAATTCATCAATGTGCCAGA +ATGGTCTTACATAGTGGAGAAGGCCAATCCAGTCAATGACCTCTGTTACCCAGGAGTTTT +CAATGACTATGAAGAATTGAAACACCTATTGAGCCGAATAAACCATTTTGAGAAAATTCA +GATCATCCCCAAGAGTTCTTGGCCCAGTCATGAAGCCTCATTGGGGGTGAGCGCAGCATG +TCCATACCAGGGAAAGTCCTCCTTTTTCAGAAATGTGGTATGGCTTATCAAAAAGAACAG +TACATATCCAACAATAAGGAGGAGTTACAATAATACCGACCAAGAAGATCTTTTAGTAAT +GTGGGGGATCCACCATCCTAATGATGCGGCAGAGCAGACAAAGCTCTATCAAAATCCAAC +CACCTATATCTCCGTTGGGACATCAACGCTAAACCAGAGATTGACACCAAGAATAGCTAC +TAGATCCAAAGTAAACGGGCAAAGTGGGAGGATGGAGTTCTTCTGGACAATTTTAAAACC +GAATGATGCAATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGAATATGCATACAA +AATTGTCAAGAAAGGGGACTCAACAATTATGAAAAGTGAATTGGAATATGGCAACTGCAA +CACCAAGTGTCAAACTCCAATGGGGGCGATAAACTCTAGTATGCCATTCCACAATATACA +TCCTCTCACTATTGGGGAATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGAC +CGGGCTCAGAAATAGCCCTCAAAGAGAGGGAAGAAGAAAAAAGAGAGGATTATTTGGAGC +TATAGCAGGTTTTATAGAGGGAGGATGGCAGGGGATGGTAGATGGTTGGTATGGGTACCA +CCATAGCAATGAGCAGGGAAGCGGGTACGCTGCAGACAAAGAATCCACTCAAAAGGCTAT +AGATGGAGTCACCAATAAGGTCAACTCGATCATTGACAAAATGAACACTCAGTTTGAGGC +CGTTGGAAGGGAATTTAACAACTTAGAAAGAAGAATAGAGAATTTAAACAAGAAGATGGA +AGACGGGTTCCTAGATGTCTGGACCTATAATGCTGAACTTCTGGTTCTCATGGAAAATGA +GAGAACTCTAGACTTCCATGATTCAAATGTAAAGAACCTTTACGACAAGGTCCGATTACA +GCTTAGGGATAATGCAAAGGAGCTGGGTAACGGTTGTTTCGAGTTCTATCACAAATGTGA +CAATGAATGTATGGAAAGTGTGAGAAACGGGACGTATGACTACCCGCAGTATTCAGAAGA +AGCAAGATTAAAAAGAGAGGAAATAAGTGGAGTGAAATTGGAATCGATAGGAGTTTACCA +AATACTGTCAATTTATTCTACAGTGGCGAGTTCCCTAGCATTGGCAATCATGGTAGCTGG +TCTATCCTTATGGATGTGCTCCAATGGGTCTTTACAATGCAGAATCTGCATTTAAATTTG +TGAGTTCAGATTGTAGTTAAAAACACCCTTGTTTCTACT +>A/northernpintail/Akita/714/2006 +AGCAAAAGCAGGGGTCTAATCTGTCAAAATGGAGAAAATAGTACTTCTTTTTGCAATAGT +CAGTCTCGTCAAAAGTGACCAAATTTGCATTGGTTACCATGCAAACAACTCGACAAAGCA +GGTTGACACAATAATGGAAAAGAATGTTACTGTCACGCATGCCCAAGATATACTGGAAAA +GACACACAATGGAAAGCTCTGCAGTCTAAATGGAGTTAAGCCTCTCATTTTGAGGGATTG +TAGCGTAGCTGGATGGCTCCTTGGAAACCCCATGTGTGATGAATTCCTCAATGTGCCGGA +ATGGTCCTACATAGTGGAGAAAGACAGCCCAATCAATGGCCTCTGCTACCCAGGGGATTT +CAACGACTATGAAGAACTGAAACACTTATTGAGCAGTACAAACCATTTTGAGAAAATTCA +AATCATCCCCAGGAGTTCTTGGTCCAATCATGATGCCTCATCAGGAGTGAGCTCCGCATG +TCCATATAATGGGAGGTCCTCCTTTTTCAGAAATGTGGTGTGGCTCATCAAAAAGAACAA +TGCATACCCAACAATAAAGAGGAGTTACAATAATACTAATCAAGAAGATCTTTTGGTACT +GTGGGGGATTCACCATCCTAATGATGCAGCAGAGCAGACAAAGCTCTATCAAAACCCAAC +CACTTACGTTTCTGTTGGGACATCAACACTGAACCAGAGATCAGTCCCAGAAATAGCTAC +CAGGCCCAAAGTAAATGGGCAAAGTGGAAGAATGGAGTTTTTCTGGACAATCTTAAAGCC +AAATGATGCTATCAACTTCGAGAGCAATGGGAATTTTATTGCTCCAGAATATGCATACAA +AATTGTCAAGAAAGGAGACTCAGCAATCATGAAAAGTGGACTGGAATATGGTAACTGCAA +CACCAAGTGCCAAACTCCAATGGGTGCAATAAACTCCAGCATGCCATTTCACAACATACA +CCCTCTCACCATTGGAGAATGTCCCAAATACGTGAAGTCAGATAGATTAGTCCTTGCAAC +AGGGCTCAGAAATGTCCCTCAAAGAGAAACAAGAGGACTATTTGGGGCCATAGCAGGCTT +CATAGAAGGAGGGTGGCAAGGAATGGTAGACGGCTGGTATGGATACCACCATAGCAACGA +GCAAGGGAGTGGATACGCTGCAGACAAAGAATCCACCCAAAAGGCAATAGATGGAATCAC +TAATAAGGTCAACTCAATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGGAAGGA +ATTTAATAACTTAGAAAGGAGGATAGAGAATTTGAACAAGAAAATGGAAGGCGGGTTCCT +AGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAATGAAAGAACCCTAGA +CTTTCACGACTCAAATGTCAAGAACCTTTATGACAAGGTTCGACTACAACTTAGGGATAA +TGCAAAGGAGCTGGGTAATGGTTGTTTCGAGTTCTATCACAAATGTGATGATGAATGTAT +GGAAAGTGTAAGAAACGGAACGTATGACTACCCGCAGTATTCAGAAGAGGCAAGATTAAA +CAGAGAGGAAATAAGTGGAGTAAAATTGGAATCAATAGGAACCTACCAAATACTGTCAAT +TTATTCAACAGTGGCAAGTTCCTTAGCACTGGCAATCATGGTAGCTGGTCTATCTTTCTG +GATGTGCTCCAATGGATCATTGCAATGCAGGATTTGCATTTAAACTTGTAAGTTCAGATT +GTAATTAAAAACACCCTTGTTTCTACT +>A/duck/Tottori/Vac-T1/2020 +TCTAATCTGTCAAAATGGAGAAAATAGTGCTTCTTCTTGCAATAGTCAGTCTTGTTAAAA +GTGATCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAACAGGTTGACACAATAA +TGGAAAAGAATGTCACTGTCACACATGCCCAAGACATACTAGAAAAGGCACACAACGGGA +AGCTCTGCAGCCTAAATGGAGTGAGGCCTCTTATTCTAAGGGATTGTAGTGTAGCGGGAT +GGCTTCTCGGAAACCCCATGTGTGATGAATTCCTCAATGTGCCAGAATGGTCTTACATAG +TGGAGAAGGACAACCCAGTCAATGGCCTCTGCTACCCAGGAGATTTCAACGACTATGAAG +AATTGAAACACCTATTGAGTAGCACAAACCATTTTGAGAAAATTCAAATCATTCCCAGAA +GTTCTTGGTCCGATCATGACGCCTCATCAGGGGTGAGTTCTGCATGCCCATATAATGGGA +GGTCCTCCTTTTTTCGAAATGTGGTGTGGCTCATCAAAAAGAACAATGCATACCCAACAA +TAAAGAGGAGTTACAATAATACCAACCAAGAAGATCTTTTGGTGCTGTGGGGAATTCATC +ATCCTAATGATGCGGCAGAGCAGACGAAGCTTTATCAAAACCCGACTACTTACGTTTCCG +TTGGAACATCAACACTGAACCAAAGATCGGTACCAGAAATAGCTACTAGACCCAAAGTAA +ACGGGCAGAGTGGAAGAATGGAGTTCTTCTGGACAATTTTAAAGCCAAATGATGCCATCA +ATTTTGAGAGTAATGGAAATTTTATTGCTCCAGAATATGCATACAAAATTGTCAAGAAGG +GGGACTCAGCAATCATGAAAAGTGACTTGGAATACGGTAACTGCAACACCAAGTGTCAGA +CTCCAATGGGTGCGATAAACTCTAGCATGCCGTTCCACAACATACACCCTCTCACCATTG +GGGAATGCCCCAAATACGTGAAATCAGATAGATTAGTCCTTGCGACTGGACTCAGGAATG +TTCCTCAAAGGGAAACAAGAGGACTATTTGGGGCTATAGCAGGCTTTATAGAAGGAGGGT +GGCAAGGCATGGTAGATGGTTGGTATGGATACCACCATAGCAATGAGCAGGGAAGTGGAT +ACGCTGCAGACAAGGAGTCCACTCAGAAAGCAATAGATGGAATCACTAATAAGGTCAACT +CAATCATTGATAAAATGAACACTCAGTTTGAGACCGTCGGAAAGGAGTTCAACAACCTGG +AAAGGAGGATAGAGAATCTAAACAAGAAGATGGAAGACGGGTTTCTAGATGTATGGACTT +ATAATGCTGAACTTCTGGTTCTCATGGAAAATGAGAGAACTCTAGACTTTCATGATTCAA +ATGTCAAGAACCTTTATGACAAGGTTCGACTACAGCTTAGAGATAATGCAAAGGAACTGG +GTAATGGTTGTTTTGAGTTCTATCACAAATGTGATAATGAATGTATGGAAAGCGTAAAAA +ACGGGACATATAATTACCCGCAATATTCAGAAGAGGCAAGGCTAAATAGAGAGGAAATAA +GTGGAGTAAAATTGGAATCAATAGGAACTTACCAAATACTGTCAATTTATTCAACAGTGG +CGAGTTCCCTAGCACTGGCAATCATGATAGCTGGTCTATCTTTCTGGATGTGCTCCAATG +GATCATTGCAGTGCAGAATTTGCATTTAAACTTGTGAGTTCAGATTGTAGTTA +>A/whistlingswan/Shimane/499/1983 +CAGGGGTCTAAACTATCAAAATGGAAAGAATAGTGATTGCCCTTGCAATAATCAGCATTG +TCAAAGGTGACCAAATCTGCATCGGTTATCATGCAAACAATTCAACAGAACAGGTTGACA +CAATCATGGAGAAGAATGTGACGGTCACACATGCTCAGGACATACTGGAAAAAGAGCACA +ATGGGAAACTCTGCAGTCTCAAAGGAGTGAGGCCCCTCATTCTGAAGGATTGCAGTGTGG +CTGGATGGCTTCTTGGAAACCCAATGTGTGATGAATTCCTGAATGTACCGGAATGGTCAT +ACATTGTGGAAAAAGATAATCCAGTCAATGGCTTGTGCTATCCAGGAGACTTCAACGATT +ATGAAGAACTGAAGCATTTAATGAGCAGCACAAACCATTTTGAGAAAATTCAGATAATTC +CTAGAAGCTCTTGGTCCAACCACGATGCCTCATCAGGAGTGAGCTCAGCATGCCCATACA +ATGGTAGATCTTCCTTTTTCAGGAATGTAGTGTGGTTGATCAAGAAGAATAATGCGTACC +CAACAATAGAGAGGACCTACAACAACACCAATGTAGAAGACCTTCTAATATTATGGGGAA +TCCACCACCCTAATGATGCAGCAGAACAAACAAAACTCTACCAGAACTCGAACACTTATG +TGTCTGTAGGAACATCAACGCTGAATCAGAGGTCAATCCCAGAAATAGCCACCAGGCCCA +AAGTGAACGGGCAAAGTGGAAGAATGGAATTTTTCTGGACAATACTAAGGCCGAACGATG +CAATCAGCTTTGAGAGTAATGGGAACTTTATAGCTCCTGAATATGCATACAAGATTGTTA +AAAAAGGAGGTTCAGCAATCATGAAAAGTGAACTGGAGTATGGTAACTGTGATACCAAAT +GTCAGACCCCGGTGGGTGCTATAAATTCCAGTATGCCTTTCCACAATATTCATCCCCTTA +CCATTGGGGAGTGCCCCAAATATGTCAAATCGGACAAACTGGTCCTTGCAACAGGACTAA +GAAACGTACCCCAAAGAGAAACAAGAGGTCTGTTTGGAGCAATAGCAGGATTCATAGAAG +GAGGATGGCAAGGAATGGTAGATGGATGGTATGGATACCATCATAGCAATGAGCAGGGGA +GTGGATATGCTGCAGACAAAGAATCCACCCAGAAAGCAATCGATGGGATCACCAATAAAG +TAAACTCAATCATTGACAAAATGAACACTCAATTCGAAGCCGTCGGGAAAGAATTCAACA +ACCTAGAAAGGAGAATAGAAAATTTAAATAAGAAAATGGAAGATGGGTTTTTAGATGTAT +GGACTTACAATGCAGAACTTCTGGTGCTCATGGAAAACGAAAGAACTCTGGATTTCCATG +ATTCAAATGTCAAGAACTTATACGATAAGGTCCGACTACAGCTGAGAGACAATGCAAAAG +AATTAGGCAACGGGTGTTTTGAGTTCTATCACAAATGTGACAATGAATGCATGGAAAGTG +TGAGAAATGGAACGTATGACTATCCACAGTACTCAGAAGAATCAAGGCTGAACAGGGAGG +AAATAGACGGAGTCAAATTGGAATCAATGGGCACTTATCAGATACTATCAATCTACTCAA +CAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTAGCTGGTCTATCTTTTTGGATGTGCT +CCAATGGATCATTGCAGTGCAGAATTTGCATCTAGGATTGTGAGTTCAGATTATAATTAA +AAACACC +>A/mallard/Wisconsin/568/1982 +GGTCTAAACTATCAAAATGGAAAGAATAGTGATTGCCCTTGCAATAATCAGCGTTGTCAA +AAGTGACCAAATCTGCATTGGTTATCATGCAAACAATTCAACAGAACAGGTTGACACAAT +CATGGAGAAGAACGTGACGGTCACACATGCTCAGGACATACTGGAAAAAGAGCACAACGG +GAAACTCTGCAGTCTCAAAGGAGTGAGGCCCCTCATTCTGAAGGATTGCAGTGTGGCTGG +ATGGCTTCTTGGAAACCCAATGTGTGATGAATTCTTGAATGTACCGGAATGGTCATACAT +TGTAGAAAAAGACAATCCGGTCAATGGCTTGTGCTATCCAGGAGACTTCAACGATTATGA +AGAACTGAAGCACTTAGTGAGCAGCACAAACCATTTTGAGAAAATTCAGATAATCCCTAG +GAGCTCTTGGTCCAATCATGATGCCTCATCAGGAGTGAGCTCAGCATGCCCATACAATGG +TAGATCTTCCTTTTTCAGGAATGTAGTGTGGTTGATCAAGAAGAATAATGCGTACCCAAC +AATAAAGAGGACCTACAACAACACCAATATGGAGGACCTTCTGATATTGTGGGGAATCCA +CCACCCTAATGATGCAGCAGAACAAACAAAACTCTACCAGAACTCGAACACTTATGTGTC +TGTAGGAACATCAACACTGAATCAGAGGTCAATCCCAGAAATAGCTACCAGGCCCAAAGT +GAACGGACAAAGTGGAAGAATGGAATTTTTCTGGACAATACTAAGGCCGAACGATGCGAT +CAGCTTTGAAAGTAACGGGAACTTTATAGCTCCTGAATATGCATACAAGATAGTTAAAAA +AGGAGATTCAGCAATCATGAAAAGTGAACTGGAGTATGGTAACTGTAATACCAAATGTCA +GACCCCAGTAGGTGCTATAAATTCCAGTATGCCTTTCCATAATGTCCATCCCCTTACCAT +TGGAGAGTGCCCCAAGTATGTCAAATCCGACAAACTGGTCCTTGCAACAGGACTGAGGAA +CGTGCCCCAAAGAGAAACAAGAGGTCTGTTTGGAGCAATAGCAGGATTCATAGAAGGAGG +ATGGCAAGGAATGGTAGATGGATGGTATGGATATCATCATAGCAATGAGCAGGGAAGTGG +ATATGCTGCAGACAAAGAATCCACTCAGAAAGCAATCGACGGGATCACCAATAAAGTAAA +TTCAATCATTGACAAAATGAACACTCAATTCGAAGCTGTTGGGAAAGAATTCAACAACCT +AGAAAGGAGAATAGAAAATTTAAATAAGAAAATGGAAGATGGGTTTCTAGATGTATGGAC +TTACAATGCAGAACTTCTGGTGCTCATGGAAAACGAAAGAACTCTGGATTTCCATGATTC +AAATGTCAGGAACTTATACGATAAGGTCCGACTCCAGCTGAGAGACAATGCAAAAGAATT +AGGCAATGGGTGTTTTGAGTTCTATCACAAGTGTGACAATGAATGCATGGAAAGTGTGAG +AAATGGAACGTATGACTATCCACAATACTCAGAAGAATCAAGGCTAAACAGGGAGGAAAT +AGATGGAGTCAAATTGGAATCAATGGGCACTTATCAGATACTATCAATCTACTCAACAGT +GGCGAGTTCCCTAGCACTGGCAATCATGGTAGCTGGTCTGTCTTTTTGGATGTGCTCCAA +TGGATCATTGCAGTGCAGAATTTGCATCTAGGGTTGTGAGTTCAGATTTTAATTAAAAAC +AC +>A/duck/Vietnam/LBM813/2015 +TTCAATCTGTCAAAATGGAGAAAATAGTGCTTCTTCTTGCAGTGGTTAGCCTTGTTAAAA +GTGATCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACACGATAA +TGGAAAAAAACGTCACTGTTACACATGCCCAAGACATACTGGAAAAGACACACAACGGGA +GGCTCTGCGATCTGAATGGAGTGAAACCTCTGATTTTAAAGGATTGTAGTGTAGCTGGAT +GGCTTCTTGGAAACCCAATGTGCGACGAGTTCATCAGAGTGCCGGAATGGTCCTACATAG +TGGAAAGGGCTAACCCAGCCAATGACCTCTGTTACCCAGGGAATCTCAATGACTATGAAG +AACTGAAACACTTATTGAGCAGAATAAATCATTTTGAGAAGACTCTGATCATCCCCAAGA +GTTCTTGGCCCAATCATGAAACATCATTAGGGGTGAGCGCAGCTTGTCCATACCAGGGAA +TGCCCTCCTTTTTCAGAAATGTGGTATGGCTTAYCAAGAAGAACGATGCATACCCAACAA +TAAAGATGAGCTACAATAATACCAATAGGGAAGATCTTTTGATACTGTGGGGGATTCATC +ATCCCAACAATGAAGCAGAGCAAACAAGTATCTATAAAAATCCAACCACCTATGTTTCCG +TTGGGACATCAACATTAAACCAGAGATTGGTGCCAAAAATAGCTACTAGATCCCAAGTAA +ACGGGCAACGTGGAAGAATGGATTTCTTCTGGACAATTTTAAAACCGAATGATGCAATCC +ACTTCGAGAGTAATGGAAATTTTATTGCTCCAGAATATGCATACAAAATTGTCAAGAAAG +GGGACTCAACAATTATGAAAAGTGAAATGGAATACGGCTACTGTAACACCAAATGTCAAA +CTCCAATAGGGGCGATAAACTCTAGTATGCCATTCCACAATATACACCCTCTCACTATCG +GGGAGTGCCCCAAATACGTGAAATCAAACAAATTAGTCCTTGCGACTGGGCTCAGAAATA +GTCCTCTAAGAGAAAGAAGAAGAAAGAGAGGACTATTTGGAGCTATAGCAGGTTTTATAG +AAGGAGGATGGCAAGGAATGGTAGATGGTTGGTATGGGTACCACCATAGCAATGAACAGG +GGAGTGGGTACGCTGCAGACAAAGAATCCACCCAAAAGGCAATAGATGGAGTTACCAATA +AGGTCAACTCGATCATTGACAAAATGAACACTCAATTTGAGGCCGTTGGAAGGGAATTCA +ATAACTTAGAACGGAGAATAGAGAATTTAAATAAGAAAATGGAAGACGGATTCCTAGATG +TCTGGACTTATAATGCTGAACTTTTAGTTCTCATGGAAAATGAGAGAACTCTAGATTTCC +ATGACTCAAATGTCAAGAACCTTTATGACAAAGTCCGACTACAGCTTAGGGATAATGCAA +AGGAGCTGGGTAATGGTTGTTTCGAGTTCTATCACAAATGTGATAATGAATGTATGGAAA +GTGTAAGAAATGGGACGTACGACTACCCCCAATATTCAGAAGAAGCAAGATTAAAAAGGG +AAGAAATAAGCGGAGTGAAACTGGAATCAATAGGAACTTACCAAATACTGTCAATTTATT +CAACAGTGGCGAGTTCCCTAACACTGGCAATCATCGTGGCTGGTCTATCTTTATGGATGT +GCTCCAATGGGTCGTTACAATGCAGAATTTGCATTTAAATTTGTGAGCTCAAATTGTAAT +TA +>A/duck/Vietnam/LBM835/2015 +TTCAATTTGTCAAAATGGAGAAAATAGTGCTTCTTCTTGCAGTGGTTAGCCTTGTTAAAA +GTGATCAGATTTGCATTGGTTACCATGCAAACAACTCAACAGAGCAGGTTGACACGATAA +TGGAAAAAAACGTCACTGTTACACATGCACAAGACATACTGGAAAAGACACACAACGGGA +GGCTCTGCGATCTGAATGGAGTGAAACCTCTGATTTTAAAGGATTGTAGTGTAGCTGGAT +GGCTTCTTGGAAACCCAATGTGCGACGAGTTCATCAGAGTGCCGGAATGGTCCTACATAG +TGGAAAGGGCTAACCCAGCCAATGACCTCTGTTACCCAGGGAATCTCAATGACTATGAAG +AACTGAAACACTTATTGAGCAGAATAAATCATTTTGAGAAGACTCTGATCATCCCCAAGA +GTTCTTGGCCCAATCATGAAACATCATTAGGGGTGAGCGCAGCTTGTCCATACCAGGGAA +TGCCCTCCTTTTTCAGAAATGTGGTATGGCTTACCAAGAAGAACGATGCATACCCAACAA +TAAAGATGAGCTACAATAATACCAATAGGGAAGATCTTTTGATACTGTGGGGGATTCATC +ATCCCAACAATGAAGCGGAGCAAACAAGTATCTATAAAAATCCAAACACCTATGTTTCCG +TTGGGACATCAACATTAAACCAGAGATTGGTGCCAAAAATAGCTACTAGATCCCAAGTAA +ACGGGCAACGTGGAAGAATGGATTTCTTCTGGACAATTTTAAAACCGAATGATGCAATCC +ACTTCGAGAGTAATGGAAATTTTATTGCTCCAGAATATGCATACAAAATTGTCAAGAAAG +GGGACTCAACAATTATGAAAAGTGAAATAGAATACGGCTACTGCAACACCAAATGTCAAA +CTCCAATAGGGGCGATAAACTCTAGTATGCCATTCCACAATATACACCCTCTCACTATCG +GGGAGTGCCCCAAATACGTGAAATCAAACAAATTAGTCCTTGCAACTGGGCTCAGAAATA +GTCCTCTAAGAGAAAGAAGAAGAAAAAGAGGGCTATTTGGAGCTATAGCAGGTTTTATAG +AGGGAGGATGGCAAGGAATGGTAGATGGTTGGTATGGGTATCACCATAGCAATGAACAGG +GGAGTGGGTACGCTGCAGACAGAGAATCCACCCAAAAGGCAATAGATGGAGTTACCAATA +AGGTCAACTCGATCATTGACAAAATGAACACTCAATTTGAGGCCGTTGGAAGGGAATTCA +ATAACTTAGAACGGAGAATAGAGAATTTAAATAAGAAAATGGAAGACGGATTCCTAGATG +TCTGGACTTATAATGCTGAACTTTTAGTTCTCATGGAAAATGAGAGAACTCTAGATTTCC +ATGACTCAAATGTCAAGAACCTTTATGACAAAGTCCGACTACAGCTTAGGGATAATGCAA +AGGAGCTGGGTAATGGTTGTTTCGAGTTCTATCACAAATGTGATAATGAATGTATGGAAA +GTGTAAGAAATGGGACGTACGACTACCCCCAATATTCAGAAGAAGCAAGATTAAAAAGGG +AAGAAATAAGCGGAGTGAAACTGGAATCAATAGGAACTTACCAAATACTGTCAATTTATT +CAACAGTGGCGAGTTCCCTAACACTGGCAATCATCGTGGCTGGTCTATCTTTATGGATGT +GCTCCAATGGGTCGTTACAATGCAGAATTTGCATTTAAATTTGTGAGCTCAAATTGTAAT +TA +>A/muscovyduck/Vietnam/LBM1101/2018 +TTCAGTCTGTCAAAATGGAGAAAATAGTACTTCTTCTTTCAATGGTTGGCCTTGTTAAAA +GTGATCAGATTTGCATTGGTTACCATGCAAACAACTCAACAGAGCAGGTTGACACAATAA +TGGAAAAAAACGTCACTGTTACGCACGCCCAAGACATACTGGAAAAGACACACAACGGGA +AGCTCTGCGATCTGAATGGAGTGAAACCTCTGATTTTAAAGAATTGTAGTGTAGCTGGAT +GGCTTCTTGGAAACCCAATGTGCGACGAGTTCACCAGCGTACCGGAATGGTCTTACATAG +TGGAGAGGGCTAACCCAGCCAATGACCTCTGTTACCCAGGGAACCTCAATGACTATGAAG +AACTGAAACACCTATTGAGCAGAATAAATCATTTTGAGAAGACTCAGATCATCCCCAAGA +GGTCTTGGTCCAATCATACATCATCAGGAGTGAGCGCAGCATGTCCATACACAGGGGTGG +CCTCCTTTTTTAGAAATGTGGTATGGCTTACCAAGAAGAATGATGCATACCCAACAATAA +AGAAGAGCTACAATAATACCAACAAAGAAAATCTTTTGATACTGTGGGGAATCCATCATT +CCAACAGTGCAGAGGAGCAGGCAGATCTCTACAAGAACCCAACCACCTATGTTTCCGTTG +GGACATCAACACTAAACCAGAGGTTGGTGCCAAAAATAGCTACTAGATCCCAAGTAAATG +GGCAACGTGGAAGAATGGATTTCTTCTGGACAATCTTAAGACCGAATGATGCAATCCACT +TCGAGAGTAATGGAAATTTTATCGCTCCAGAATATGCATACAAAATTATCAAGACAGGAG +ACTCAACAATTATGAAAAGTGAAATAGAATATGGCAACTGCAACACCAAATGTCAAACTC +CAATAGGGGCGATAAACTCTAGTATGCCATTCCACAATATACATCCTCTCACTATCGGGG +AGTGCCCCAAATATGTGAAATCAAACAAATTAGTCCTTGCGACTGGGCTCAGAAATAGTC +CTCTAAGAGAAAGAAGAAGAAAAAGAGGACTGTTTGGAGCTATAGCAGGGTTTATAGAGG +GAGGATGGCAAGGAATGGTAGATGGTTGGTATGGGTACCACCATAGTAATGAACAGGGGA +GTGGGTACGCTGCAGACAGAGAATCCACCCAAAAGGCAATAGATGGAGTCACCAACAAGG +TCAACTCGATAATTGACAAAATGAACACTCAATTTGAGGCCGTTGGAAGAGAATTTAATA +GCTTAGAACGGAGAATAGAGAATTTAAATAAGAAAATGGAAGACGGATTCCTAGATGTCT +GGACTTATAATGCTGAACTTTTAGTTCTCATGGAAAATGAGAGAACTCTAGATTTCCATG +ACTCAAATGTCAAGAACCTTTATGACAAAGTCCGACTACAGCTTAGGGATAATGCAAAGG +AGCTGGGTAATGGTTGTTTCGAGTTCTATCACAAATGTGATAATGAATGTATGGAAAGTG +TGAGAAATGGAACGTACGACTACCCCCAGTACTCAGAAGAAGCAAGATTAAAAAGGGAAG +AAATAAGCGGAGTGAAATTGGAATCAATAGGAACTTATCAAATACTGTCAATTTATTCAA +CAGTGGCGAGTTCCCTAGTACTGGCAATCATTGTGGCTGGTCTATCTTTATGGATGTGCT +CCAATGGGTCATTACAATGCAGAATTTGCATTTAAATTTGTGAGCTCAAATTGTAATTA +>A/duck/NhaTrang/301/2018 +TTCAGTCTGTCAAAATGGAGAAAATAGTACTTCTTCTTTCAATGGTTGGCCTTGTTAAAA +GTGATCAGATTTGTATTGGTTACCATGCAAACAACTCAACAGAGCAGGTTGACACAATAA +TGGAAAAAAACGTCACTGTTACGCATGCCCAAGACATACTGGAAAAGACACACAACGGGA +AGCTCTGCGATCTGAATGGAGTGAAACCTCTGATTTTAAAGAATTGTAGTGTAGCTGGAT +GGCTTCTTGGAAACCCAATGTGCGACGAGTTCATCAGCGTACCGGAATGGTCTTACATAG +TGGAGAGGGCTAACCCAGCCAATGACCTCTGTTACCCAGGGAACCTCAATGACTATGAAG +AACTGAAACACCTATTGAGCAGAATAAATCATTTTGAGAAGACTCAGATCATCCCCAAGA +GGTATTGGTCCAATCATACATCATCAGGAGTGAGCGCAGCATGTCCATACACAGGGGTGG +CCTCCTTTTTTAGAAATGTGGTATGGCTTACCAAGAAGAATGATGCATACCCAACAATAA +AGAAGAGCTACAATAATACCAACAAAGAAGATCTTTTGATACTGTGGGGAATCCATCATT +CCAACAGTGCAGAGGAGCAGGCAGATCTCTACAAGAACCCAACCACCTATGTTTCCGTTG +GGACATCAACACTAAACCAGAGGTTGGTGCCAAAAATAGCTACTAGATCCCAAGTAAATG +GGCAACGTGGAAGAATGGATTTCTTCTGGACAATCTTAAGACCGAATGATGCAATCCACT +TCGAGAGTAATGGGAATTTTATCGCTCCAGAATATGCATACAAAATTATCAAGACAGGAG +ACTCAACAATTATGAAAAGTGAAATAGAATATGGCAACTGCAACACCAAGTGTCAAACTC +CAATAGGGGCGATAAACTCTAGTATGCCATTCCACAATATACATCCTCTCACTATCGGGG +AGTGCCCCAAGTATGTGAAATCAAACAAATTAGTCCTTGCGACTGGGCTCAGAAATAGTC +CTCTAAGAGAAAGAAGAAGAAAAAGAGGACTGTTTGGAGCTATAGCAGGGTTTATAGAGG +GAGGATGGCAAGGAATGGTAGATGGTTGGTATGGGTACCACCATAGTAATGAACAGGGGA +GTGGGTACGCTGCAGACAGAGAATCCACCCAAAAGGCAATAGATGGAGTCACCAACAAGG +TCAACTCGATAATTGACAAAATGAACACTCAATTTGAGGCCGTTGGAAGAGAATTTAATA +GCTTAGAACGGAGAATAGAGAATTTAAATAAGAAAATGGAAGACGGATTCCTAGATGTCT +GGACTTATAATGCTGAACTTTTAGTTCTCATGGAAAATGAGAGAACTCTAGATTTCCATG +ACTCAAATGTCAAGAACCTTTATGACAAAGTCCGACTACAGCTTAGGGATAATGCAAAGG +AGCTGGGTAATGGTTGTTTCGAGTTCTATCACAAATGTGATAATGAATGTATGGAAAGTG +TGAGAAATGGAACGTACGACTACCCCCAGTACTCAGAAGAAGCAAGATTAAAAAGGGAAG +AAATAAGCGGAGTGAAATTGGAATCAATAGGAACTTACCAAATACTGTCAATTTATTCAA +CAGTGGCGAGTTCCCTAGTACTGGCAATCATTGTGGCTGGTCTATCTTTATGGATGTGCT +CCAATGGGTCGTTACAATGCAGAATTTGCATTTAAATTTGTGAGCTCAAATTGTAATTA +>A/beangoose/Ishikawa/1701A014/2017 +TTCAATCTGTCAAAATGGAGAAAATAGTGCTTCTTCTTGCAGTGGTTAGCCTTGTTAAAA +GTGATCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACACGATAA +TGGAAAAAAACGTCACTGTTACACATGCCCAAGACATATTGGAAAAGACACACAACGGGA +GGCTCTGCGATCTGAATGGAGTGAAACCTCTGATTTTAAAGGATTGTAGTGTAGCTGGAT +GGCTTCTTGGAAACCCAATGTGCGATGAATTCATCAGAGTGCCGGAATGGTCTTACATAG +TGGAGAGGACTAACCCAGCCAATGACCTCTGTTACCCAGGGAACCTCAATGACTATGAAG +AACTGAAACACCTATTGAGCAGAATAAATCATTTTGAGAAGACTCTGATCATCCCCAAGA +GTTCTTGGCCCAATCATGAAACATCAGGGGTGAGCGCAGCATGCCCATACCAGGGAGTGC +CCTCCTTTTTCAGAAATGTGGTATGGCTTACCAAGAAGAACGATGCATACCCAACAATAA +AGATGAGCTACAATAATACCAATGGGGAAGATCTTTTGATACTGTGGGGGATTCATCATT +CCAACAATGCAGCAGAGCAGACAAATCTCTATAAAAACCCAACCACCTATATTTCCGTTG +GGACATCAACATTAAACCAGAGATTGGTGCCAAAAATAGCTACTAGATCCCAAGTAAACG +GGCAACAAGGAAGAATGGATTTCTTCTGGACAATTTTAAAACCGAATGATGCAATCCACT +TTGAGAGTAATGGAAATTTTATTGCTCCAGAATATGCATACAAAATAGTCAAGAAAGGGG +ACTCAACAATTATGAAAAGTGAAATGGAATATGGCCACTGCAACACCAAATGTCAAACTC +CAATAGGGGCGATAAACTCTAGTATGCCATTCCACAATATACACCCTCTCACCATCGGGG +AGTGCCCCAAATACGTGAAATCAAACAAATTAGTCCTTGCGACTGGACTCAGAAATAGTC +CTTTAAGAGAAAGAAGAAGAAAAAGAGGACTATTTGGAGCTATAGCAGGGTTCATAGAGG +GAGGATGGCAAGGAATGGTAGATGGTTGGTATGGGTACCACCATAGCAATGAACAGGGGA +GTGGGTACGCTGCAGACAGAGAATCCACCCAAAAGGCAATAGATGGAGTTACCAATAAGG +TCAACTCGATAATCGACAAAATGAACACTCAATTTGAGGCCGTTGGAAGGGAGTTTAATA +ACTTAGAACGGAGAATAGAGAATTTAAATAAGAAAATGGAAGACGGATTCCTAGATGTCT +GGACTTACAATGCTGAACTTTTAGTTCTCATGGAAAATGAGAGAACTTTAGATTTTCACG +ATTCAAATGTAAAGAACCTTTATGACAAAGTCCGACTACAGCTTAGGGATAATGCAAAGG +AGCTAGGTAATGGTTGTTTCGAGTTCTATCATAAATGTGATAATGAATGTATGGAAAGTG +TAAGGAATGGGACGTATGACTATCCCCAGTATTCAGAAGAGGCAAGATTAAAAAGGGAAG +AATTAAGCGGAGTGAAATTGGAATCAATAGGAACTTACCAAATACTGTCAATTTATTCAA +CAGTGGCGAGTTCCCTAGCACTGGCAATCATTGTGGCTGGTCTATCTTTATGGATGTGCT +CCAATGGGTCGTTACAATGCAGAATTTGCATTTAAATTTGTGAGCTCAAATTGCAATTA +>A/snowyowl/Akita/0051D007/2016 +TTCAATCTGTCAAAATGGAGAAAATAGTGCTTCTTCTTGCAGTGGTCAGCCTTGTTAAAA +GTGATCAGATCTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACACGATAA +TGGAAAAAAACGTCACTGTTACACATGCCCAAGACATACTGGAAAAGACACACAACGGGA +GGCTCTGCGATCTGAATGGAGTGAAACCTCTGATTCTAAAGGATTGTAGTGTAGCTGGAT +GGCTTCTTGGAAACCCAATGTGCGACGAATTCATCAGAGTGCCGGAATGGTCTTACATAG +TGGAGAGGACTAACCCAGCCAATGACCTCTGTTACCCAGGGAACCTCAATGACTATGAAG +AACTGAAACACCTATTGAGCAGAATAAATCATTTTGAGAAGACTCTGATCATCCCCAAGA +GTTCTTGGCCCAATCATGAAACATCAGGGGTGAGCGCAGCATGCCCATACCAGGGAGTGC +CCTCCTTTTTCAGAAATGTGGTATGGCTTACCAAGAAGAACGATGCATACCCAACAATAA +AGATGAGCTACAATAATACCAATGGGGAAGATCTTTTGATACTGTGGGGGATTCATCATT +CCAACAATGCAGCAGAGCAGATAAATCTCTATAAAAACCCAACCACCTATGTTTCCGTTG +GGACATCAACATTAAACCAGAGATTGGTGCCAAAAATAGCTACTAGATCCCAAGTAAACG +GGCAACAAGGAAGAATGGATTTCTTCTGGACAATTTTAAAACCGAATGATGCAATCCACT +TTGAGAGTAATGGAAATTTTATTGCTCCAGAATATGCATACAAAATAGTCAAGAAAGGGG +ACTCAACAATTATGAAAAGTGAAATGGAATATGGCCACTGCAACACCAAATGTCAAACTC +CAATAGGGGCGATAAACTCTAGTATGCCATTCCACAATATACACCCTCTCACCATCGGGG +AGTGCCCCAAATACGTGAAATCAAACAAATTAGTCCTTGCGACTGGACTCAGAAATAGTC +CTTTAAGAGAAAGAAGAAGAAAAAGAGGACTATTTGGAGCTATAGCAGGGTTCATAGAGG +GAGGATGGCAAGGAATGGTAGATGGTTGGTATGGGTACCACCATAGCAATGAACAGGGGA +GTGGGTACGCTGCAGACAGAGAATCCACCCAAAAGGCAATAGATGGAGTTACCAATAAGG +TCAACTCGATAATCGACAAAATGAACACTCAATTTGAGGCCGTTGGAAGGGAGTTTAATA +ACTTAGAACGGAGAATAGAGAATTTAAATAAGAAAATGGAAGACGGATTCCTAGATGTCT +GGACTTACAATGCTGAACTTTTAGTTCTCATGGAAAATGAGAGAACTTTAGATTTTCACG +ATTCAAATGTAAAGAACCTTTATGACAAAGTCCGACTACAGCTTAGGGATAATGCAAAGG +AGCTAGGTAATGGTTGTTTCGAGTTCTATCATAAATGTGATAATGAATGTATGGAAAGTG +TAAGAAATGGGACGTATGACTATCCCCAGTATTCAGAAGAAGCAAGATTAAAAAGGGAAG +AAATAAGCGGAGTGAAATTGGAATCAATAGGAACTTACCAAATACTGTCAATTTATTCAA +CAGTGGCGAGTTCCCTAGCACTGGCAATCATTGTGGCTGGTCTATCTTTATGGATGTGCT +CCAATGGGTCGTTACAATGCAGAATTTGCATTTAAATTTGTGAGCTCAAATTGCAATTA +>A/muscovyduck/QuangNinh/4c111/2013 +TTTAATCTGTCAAAATGGAGAAAATAGTGCTTCTTCTTGCAATAGTTAGCCTTGTTAAAG +GTGATCAGATTTGCATTGGTTACCATGCAAACAACTCGACGGAGCAGGTTGACACGATAA +TGGAAAAGAACGTCACTGTTACACATGCCCAAGACATACTAGAAAAGACACACAATGGAA +AGCTCTGCGATTTAAATGGAGTGAAGCCTCTGATTTTGAAGGATTGTAGTGTGGCTGGAT +GGCTTCTCGGAAACCCAATGTGCGACGAATTCATCAGGGTGCCGGAATGGTCTTACATAG +TAGAAAGGGCTAACCCAGCCAATGACCTCTGTTACCCAGGGAACCTCAATGATTATGAAG +AACTGAAACACCTATTGAGCAGAATAAATCATTTTGAGAAAATTCTGATCATCCCCAAGA +GTTCTTGGACCAATCATGAAACATCATTAGGGGTGAGCGCAGCATGCCCATACCAGGGAA +CGCCCTCATTTTTCAGAAATGTGGTATGGCTTATCAAAAAGAACGATGCATACCCCACAA +TAAAAATAAGCTACAATAATACCAATCAGGAAGATCTGTTGATACTGTGGGGGATTCACC +ATTCCAACAATGCAGCAGAGCAGACGAACCTCTATAAAAACCCAACCACCTATATTTCCG +TTGGGACATCAACATTAAACCAGAGATTGGTACCAAAAATAGCTACTAGATCCCAAGTGA +ATGGACAGCGGGGAAGAATGGATTTCTTCTGGACAATTCTAAAACCGAATGATGCAATCC +ATTTCGAGAGTAATGGAAATTTCATTGCTCCAGAATATGCATACAAAATTGTCAAGAAAG +GGGACTCAACAATTATGAAAAGTGAAGTGGAATATGGCCACTGCAACACCAAATGTCAAA +CTCCAATAGGGGCGATAAACTCTAGTATGCCATTTCACAATATACACCCTCTCACCATCG +GGGAATGCCCCAAATACGTGAAATCAAACAAATTAGTCCTTGCGACTGGGCTCAGAAATA +ATCCTCTAAGAGAAAAGAGAAGAAAAAGAGGACTATTTGGAGCTATAGCCGGGTTTATAG +AGGGAGGATGGCAGGGAATGGTAGATGGCTGGTATGGGTACCATCATAGCAATGAGCAGG +GGAGTGGGTACGCTGCAGACAAAGAATCCACCCAAAAGGCTATAGATGGAGTTACCAATA +AGGTCAACTCGATTATTGACAAAATGAACACTCAATTTGAGGCCGTTGGAAGGGAATTTA +ATAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAAATGGAAGACGGATTCCTAGATG +TCTGGACTTATAATGCTGAACTTCTAGTTCTCATGGAAAATGAGAGAACTCTAGATTTCC +ATGACTCAAATGTCAAGAACCTTTACGATAAAGTCCGACTACAGCTTAAGGACAATGCAA +AGGAGCTGGGTAATGGTTGTTTTGAGTTCTATCACAAATGTGATAATGAATGTATGGAAA +GTGTAAGAAATGGGACATATGACTACCCGCAATATTCAGAAGAAGCAAGATTAAAAAGAG +AAGAAATAAGCGGAGTGAAATTAGAGTCAATAGGAACTTACCAAATACTGTCAATTTATT +CAACAGTGGCGAGTTCCCTAGCGCTGGCAATCATAGTGGCTGGTTTATCTTTATGGATGT +GCTCCAATGGGTCGTTGCAGTGCAGAATTTGCATTTAAATTTGTGAGCTCAGATTGTAGT +T +>A/duck/NhaTrang/75c131/2014 +TTTAATCTGTCAAAATGGAGAAAATAGTGCTTCTTCTTGCAATAGTTAGCCTTGTTAAAG +GTGATCAGATTTGCATTGGTTACCATGCAAACAACTCGACGGAGCAGGTTGACACGATAA +TGGAAAAGAACGTCACTGTTACACATGCCCAAGACATACTAGAAAAGACACACAATGGAA +AGCTCTGCGATTTAAATGGAGTGAAGCCTCTGATTTTGAAGGATTGTAGTGTGGCTGGAT +GGCTTCTCGGAAACCCAATGTGCGACGAATTCATCAGGGTGCCGGAATGGTCTTACATAG +TAGAAAGGGCTAACCCAGCCAATGACCTCTGTTACCCAGGGAACCTCAATGATTATGAAG +AACTGAAACACCTATTGAGCAGAATAAATCATTTTGAGAAAATTCTGATCATCCCCAAGA +GTTCTTGGACCAATCATGAAACATCATTAGGGGTGAGCGCAGCATGCCCATACCAGGGAA +CGCCCTCATTTTTCAGAAATGTGGTATGGCTTATCAAAAAGAACGATGCATACCCCACAA +TAAAAATAAGCTACAATAATACCAATCAGGAAGATCTGTTGATACTGTGGGGGATTCACC +ATTCCAACAATGCAGCAGAGCAGACGAACCTCTATAAAAACCCAACCACCTATATTTCCG +TTGGGACATCAACATTAAACCAGAGATTGGTACCAAAAATAGCTACTAGATCCCAAGTGA +ATGGACAGCGGGGAAGAATGGATTTCTTCTGGACAATTCTAAAACCGAATGATGCAATCC +ATTTCGAGAGTAATGGAAATTTCATTGCTCCAGAATATGCATACAAAATTGTCAAGAAAG +GGGACTCAACAATTATGAAAAGTGAAGTGGAATATGGCCACTGCAACACCAAATGTCAAA +CTCCAATAGGGGCGATAAACTCTAGTATGCCATTTCACAATATACACCCTCTCACCATCG +GGGAATGCCCCAAATACGTGAAATCAAACAAATTAGTCCTTGCGACTGGGCTCAGAAATA +ATCCTCTAAGAGAAAAGAGAAGAAAAAGAGGACTATTTGGAGCTATAGCCGGGTTTATAG +AGGGAGGATGGCAGGGAATGGTAGATGGCTGGTATGGGTACCATCATAGCAATGAGCAGG +GGAGTGGGTACGCTGCAGACAAAGAATCCACCCAAAAGGCTATAGATGGAGTTACCAATA +AGGTCAACTCGATTATTGACAAAATGAACACTCAATTTGAGGCCGTTGGAAGGGAATTTA +ATAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAAATGGAAGACGGATTCCTAGATG +TCTGGACTTATAATGCTGAACTTCTAGTTCTCATGGAAAATGAGAGAACTCTAGATTTCC +ATGACTCAAATGTCAAGAACCTTTACGATAAAGTCCGACTACAGCTTAAGGACAATGCAA +AGGAGCTGGGTAATGGTTGTTTTGAGTTCTATCACAAATGTGATAATGAATGTATGGAAA +GTGTAAGAAATGGGACATATGACTACCCGCAATATTCAGAAGAAGCAAGATTAAAAAGAG +AAGAAATAAGCGGAGTGAAATTAGAGTCAATAGGAACTTACCAAATACTGTCAATTTATT +CAACAGTGGCGAGTTCCCTAGCGCTGGCAATCATAGTGGCTGGTTTATCTTTATGGATGT +GCTCCAATGGGTCGTTGCAGTGCAGAATTTGCATTTAAATTTGTGAGCTCAGATTGTAGT +TA +>A/tundraswan/Tottori/C6nk/2014 +AGCAAAAGCAGGGGTTCAATCTGTCAAAATGGAGAAAATAGTGCTTCTTCTTGCAGTGAT +TAGCCTTGTTAAAAGTGATCAGATTTGCATTGGTTACCATGCAAACAACTCAACAAAGCA +GGTTGACACGATAATGGAGAAAAACGTCACTGTTACACATGCCCAAGACATACTGGAAAA +GACACACAACGGGAAGCTCTGCGATCTTAATGGAGTGAAGCCCCTGATTCTAAAGGATTG +TAGCGTAGCTGGGTGGCTCCTTGGAAATCCAATGTGCGACGAGTTCATCAGGGTACCGGA +ATGGTCTTACATCGTGGAGAGGGCTAACCCAGCCAACGACCTCTGTTACCCAGGGACCCT +CAATGACTATGAGGAACTGAAACACCTATTGAGCAGAATAAATCATTTTGAGAAAACTCT +AATCATCCCCAGGAGTTCTTGGCCCAATCATGAAACATCATTAGGGGTGAGCGCAGCATG +TCCATACCAGGGAGCATCCTCATTTTTCAGAAATGTGGTATGGCTCATCAAAAAGAACGA +TGCATACCCGACAATAAAGATAAGCTACAATAATACCAATCGGGAAGATCTTTTGATACT +GTGGGGGATTCATCATTCCAACAATGCAGCAGAGCAGACAAATCTCTATAAAAACCCAGA +CACTTATGTTTCCGTTGGGACATCAACATTAAACCAGAGATTGGTGCCAAAAATAGCTAC +TAGATCCCAAGTAAACGGGCAGAGTGGAAGAATGGATTTCTTCTGGACAATTTTAAAACC +GAATGATGCAATCCACTTTGAGAGTAATGGAAATTTCATTGTTCCAGAATATGCATACAA +AATTGTCAAGAAAGGGGACTCAACAATTATGAAAAGTGAAATGGAATATGGCCACTGCAA +CACCAAATGTCAAACTCCAATAGGGGCGATAAACTCTAGCATGCCATTCCACAATATACA +CCCTCTCACCATCGGGGAATGCCCCAAATACGTGAAGTCGAACAAATTAGTCCTTGCGAC +TGGGCTCAGAAATAGTCCTCTAGGAGAAAGAAGAAGAAAAAGAGGACTATTTGGAGCTAT +AGCAGGGTTTATAGAGGGAGGATGGCAGGGAATGGTAGACGGTTGGTATGGGTATCATCA +TAGCAATGAGCAGGGGAGTGGGTACGCTGCAGACAAAGAATCCACCCAAAAGGCAATAGA +TGGAGTTACCAATAAGGTCAACTCAATCATTGACAAAATGAACACTCAATTTGAGGCCGT +TGGAAGGGAATTTAATAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAAATGGAAGA +CGGATTCCTAGATGTCTGGACTTATAATGCTGAACTTTTAGTTCTCATGGAAAATGAGAG +AACTCTAGATTTCCATGACTCAAATGTCAAGAACCTTTACGACAAAGTCCGACTACAGCT +TAGGGATAATGCAAAGGAGCTGGGTAATGGTTGTTTCGAGTTCTATCACAAATGTGATAA +CGAATGTATGGAGAGCGTAAGAAATGGGACGTATGACTACCCTAAGTATTCAGAAGAAGC +AATATTAAAAAGAGAAGAAATAAGCGGAGTGAAATTAGAATCAATAGGAACTTACCAGAT +ACTGTCAATTTATTCAACAGTGGCGAGTTCCCTAGCACTGGCAATCATAGTGGCTGGTCT +ATCTTTATGGATGTGCTCTAATGGGTCGTTACAATGCAGAATTTGCATCTAAATTTGTGA +GCTCAGATTGTAATTAAAAACACCCTTGTTTCTACT +>A/mandarinduck/Gifu/2112D001/2014 +TTCAATCTGTCAAAATGGAGAAAATAGTGCTTCTTCTTGCAGTGGTTAGCCTTGTTAAAA +GTGATCAGATTTGCATTGGTTACCATGCAAACAACTCAACAAAGCAGGTTGACACGATAA +TGGAAAAGAACGTCACTGTTACACATGCTCAAGACATACTGGAAAAGACACACAACGGGA +AGCTCTGCGATCTTAATGGAGTGAAGCCCCTAATTCTAAAGGATTGTAGCGTAGCTGGGT +GGCTCCTTGGAAATCCAATGTGTGACGAGTTCATCAGGGTGCCGGAATGGTCTTACATCG +TGGAGAGGGCTAACCCAGCCAACGACCTCTGTTACCCAGGGACCCTCAAGGACTATGAGG +AACTGAAACACCTATTGAGCAGAATAAATCATTTTGAGAAAACTCTGATCATCCCCAAGA +GTTCTTGGCCCAATCATGAAACATCATTAGGGGTGAGCGCAGCATGTCCATACCAGGGAG +CATCCTCATTTTACAGAAATGTGGTATGGCTCATCAAAAAGAACGATGCATACCCGACAA +TAGAGATAAGCTACAATAATACCAATCGGGAAGATCTTTTGATACTATGGGGGATTCATC +ATTCCAACAATGCAGCAGAGCAGACAAATCTCTATAAAAACCCAGACACTTATGTTTCCG +TTGGGACATCAACATTAAACCAGAGATTGGTGCCAAAAATAGCTACTAGATCCCAAGTAA +ACGGGCAACGTGGAAGAATGGATTTCTTCTGGACAATTTTAAAACCGAATGATGCAATCC +ACTTTGAGAGTAATGGAAATTTCATTGCTCCAGAATATGCATACAAGATTGTCAAGAAAG +GGGACTCAACAATTATGAAAAGTGAAGTGGAATATGGCCACTGCAACACCAAATGTCAAA +CTCCAATAGGGGCGATAAACTCTAGCATGCCATTCCACAATATACACCCTCTCACCATCG +GGGAATGCCCCAAATACGTGAAGTCAAACAAATTAGTCCTTGCGACTGGGCTCAGAAATA +GTCCTCTAAGAGAAAGAAGAAGAAAAAGAGGACTATTTGGAGCTATAGCAGGATTTATAG +AGGGAGGATGGCAGGGAATGGTAGACGGTTGGTATGGATACCACCATAGCAATGAGCAGG +GGAGTGGGTACGCTGCAGACAAAGAATCCACCCAAAAGGCAATAGATGGAGTTACCAATA +AGGTCAACTCAATCATTGACAAAATGAACACTCAATTTGAGGCCGTTGGAAGGGAATTTA +ATAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAAATGGAAGACGGATTCCTAGATG +TCTGGACTTATAATGCTGAACTTTTAGTTCTCATGGAAAATGAGAGAACTCTAGATTTCC +ATGACTCAAATGTCAAGAACCTTTACGACAAAGTCCGATTACAGCTTAGGGATAATGCAA +AGGAGCTGGGTAATGGTTGTTTCGAGTTCTATCACAAATGTGATAACGAATGTATGGAAA +GCGTAAGAAATGGGACGTATGACTACCCTAAGTATTCAGAAGAAGCAGGATTAAAAAGAG +AAGAAATAAGCGGAGTGAAATTAGAATCAATAGGAACTTACCAAATACTGTCAATTTATT +CAACAGTGGCAAGTTCCCTAGCACTGGCAATCATAGTGGCTGGTCTATCTTTATGGATGT +GCTCTAATGGGTCGTTACAATGCAGAATTTGCATCTAAATTTGTGAGCTCAGATTGTAAT +TA +>A/goose/Guangdong/3/1997 +AGGGGTCTGATCTGTTAAAATGGAGAAAATAGTGCTTCTTCTTGCAATAGTCAGTCTTGT +CAAAAGTGATCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACAC +AATAATGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAAAAGACACACAA +TGGGAAGCTCTGCGATCTAAATGGAGTGAAGCCTCTCATTTTGAGAGATTGTAGTGTAGC +TGGATGGCTCCTCGGAAACCCTATGTGTGACGAATTCATCAATGTGCCGGAATGGTCTTA +CATAGTGGAGAAGGCCAGTCCAGCCAATGACCTCTGTTACCCAGGGGATTTCAACGACTA +TGAAGAACTGAAACACCTATTGAGCAGAACAAACCATTTTGAGAAAATTCAGATCATCCC +CAAAAGTTCTTGGTCCAATCATGATGCCTCATCAGGGGTGAGCTCAGCATGTCCATACCA +TGGGAGGTCCTCCTTTTTCAGAAATGTGGTATGGCTTATCAAAAAGAACAGTGCATACCC +AACAATAAAGAGGAGCTACAATAATACCAACCAAGAAGATCTTTTAGTACTGTGGGGGAT +TCACCATCCTAATGATGCGGCAGAGCAGACAAAGCTCTATCAAAACCCAACCACTTACAT +TTCCGTTGGAACATCAACACTGAACCAGAGATTGGTTCCAGAAATAGCTACTAGACCCAA +AGTAAACGGGCAAAGTGGAAGAATGGAGTTCTTCTGGACAATTTTAAAGCCGAATGATGC +CATCAATTTCGAGAGTAATGGAAATTTCATTGCTCCAGAATATGCATACAAAATTGTCAA +GAAAGGGGACTCAGCAATTATGAAAAGTGAATTGGAATATGGTAACTGCAACACCAAGTG +TCAAACTCCAATGGGGGCGATAAACTCTAGTATGCCATTCCACAACATACACCCCCTCAC +CATCGGGGAATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACTGGACTCAG +AAATACCCCTCAAAGAGAGAGAAGAAGAAAAAAGAGAGGACTATTTGGAGCTATAGCAGG +TTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTGGTATGGGTACCGCCATAGCAA +TGAGCAGGGGAGTGGATACGCTGCAGACAAAGAATCCACCCAAAAGGCAATAGATGGAGT +CACCAATAAGGTCAACTCGATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAG +GGAATTTAATAACTTGGAAAGGAGGATAGAGAATTTAAACAAGCAGATGGAAGACGGACT +CCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAATGAGAGAACTCT +AGACTTTCATGACTCAAATGTCAAGAACCTTTATGACAAGGTCCGACTACAGCTTAGGGA +TAATGCAAAGGAGCTGGGTAATGGTTGTTTCGAGTTCTATCACAAATGTGATAATGAATG +TATGGAAAGTGTAAAAAACGGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACT +AAACAGAGAGGAAATAAGTGGAGTAAAATTGGAATCAATGGGAACTTACCAAATACTGTC +AATTTATTCAACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTAGCTGGTCTATCTTT +ATGGATGTGCTCCAATGGATCGTTACAATGCAGAATTTGCATTTAAATTTGTGAGTTCAG +CTTGTAGTTAAAAACACCCTTG +>A/goose/Guangdong/xb/2001 +AGCAAAAGCAGGGGTCCAATCTGTCAAAATGGAGAAAATAGTGCTTCTTCTTGCAATAGT +CAGTCTTGTTAAAAGTGATCAGATTTGCATTGGTTACCATGCAAACAACTCAACAGAGCA +GGTTGACACAATAATGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAAAA +GACACACAACGGGAAGCTCTGCGATCTAGATGGAGTGAAGCCTCTAATTTTGAGAGATTG +TAGTGTAGCTGGATGGCTCCTCGGAAACCCTATGTGTGACGAATTCATCAATGTGCCGGA +ATGGTCTTACATAGTGGAGAAGGCCAGTCCAGCCAATGACCTCTGTTACCCAGGGGATTT +CAACGACTATGAAGAACTGAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCA +GATCATCCCCAAAAGTTCTTGGTCCAATCATGATGCCTCATCAGGGGTGAGCTCAGCATG +TCCATACAATGGGAAGTCCTCCTTTTTCAGAAATGTGGTATGGCTTATCAAAAAGAACAG +TACATACCCAACAATAAAGAGGAGCTACAATAATACCAACCAAGAAGATCTTTTGATACT +GTGGGGGATTCACCATCCTAATGATGCGGCAGAGCAAACAAAGCTCTATCAAAACCCAAC +CACCTATATTTCCGTTGGAACATCAACACTGAACCAGAGATTGGTCCCAAAAATAGCTAC +TAGATCCAAAGTAAACGGGCAAAGTGGAAGAATGGAGTTCTTCTGGACAATTTTAAAGCC +GAATGATACCATCAATTTCGAGAGTAATGGAAATTTCATTGCTCCAGAATATGCATACAA +AATTGTCAAGAAAGGGGACTCAGCAATTATGAAAAGTGAATTGGAATATGGTAACTGCAA +CACCAAGTGTCAAACTCCAATGGGGGCGATAAACTCTAGCATGCCATTCCACAACATACA +CCCTCTCACCATCGGGGAGTGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGAC +TGGACTCAGAAATACCCCTCAAAGAGAGAGAAGAAGAAAAAAGAGAGGACTATTTGGAGC +TATAGCAGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTGGTATGGATATCA +CCATAGCAATGAGCAGGGGAGTGGATACGCTGCAGACAAAGAATCCACTCAAAAGGCAAT +AGATGGAGTCACCAATAAGGTCAACTCGATCATTGACAAAATGAACACTCAGTTTGAGGC +CGTTGGAAGGGAATTCAATAACTTAGAAAGGAGGATAGAAAATTTAAACAAGAAGATGGA +AGACGGATTCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAGAATGA +GAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGACAAGGTCCGACTACA +GCTTAGGGATAATGCAAAGGAGCTGGGTAATGGTTGTTTCGAGTTCTATCACAAATGTGA +TAATGAATGTATGGAAAGTGTAAAAAACGGGACGTATGACTACCCGCGGTATTCAGAAGA +AGCAAGACTAAACAGAGAGGAAATAAGTGGAGTAAAATTGGAATCAATGGGAATTTACCA +AATACTGTCAATTTATTCAACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTAGCTGG +TCTATCTTTATGGATGTGCTCCAATGGATCGTTACAATGCAGAATTTGCATTTAAATCTG +TGAGTTCAGATTGTAGTTAAAAACACCCTTGTTTCTACT +>A/openbill_stork/Thailand/VSMU_4_NSN/2004 +ATGGAGAAAATAGTGCTTCTTTTTGCAATAGTCAGTCTTGTTAAAAGTGATCAGATTTGC +ATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACACAATAATGGAAAAGAACGTT +ACTGTTACACATGCCCAAGACATACTGGAAAAGACACACAACGGGAAGCTCTGCGATCTA +GATGGAGTGAAGCCTCTAATTTTGAGAGATTGTAGTGTAGCTGGATGGCTCCTCGGAAAC +CCAATGTGTGACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAAT +CCAGTCAATGACCTCTGTTACCCAGGGGATTTCAATGACTATGAAGAATTGAAACACCTA +TTGAGCAGGATAAACCATTTTGAGAAAATTCAGATCATCCCCAAAAGTTCTTGGTCCAGT +CATGAAGCCTCATTAGGGGTGAGCTCAGCATGTCCATACCAGGGAAAGTCCTCCTTTTTC +AGAAATGTGGTATGGCTTATCAAAAAGAACAGTACATACCCAACAATAAAGAGGAGCTAC +AATAATACCAACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCTAATGATGCG +GCAGAGCAGACAAAGCTCTATCAAAACCCAACCACCTATATTTCCGTTGGGACATCAACA +CTAAACCAGAGATTGGTACCAAGAATAGCTACTAGATCCAAAGTAAACGGGCAAAGTGGA +AGGATGGAGTTCTTCTGGACAATTTTAAAACCGAATGATGCAATCAACTTTGAGAGTAAT +GGAAATTTCATTGCTCCAGAATATGCATACAAAATTGTCAAGAAAGGGGACTCAACAATT +ATGAAAAGTGAATTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATGGGGGCG +ATAAACTCTAGTATGCCATTCCACAATATACACCCTCTCACCATCGGGGAATGCCCCAAA +TATGTGAAATCAAACAGATTAGTCCTTGCGACTGGGCTCAGAAATAGCCCTCAAAGAGAG +AGAAGAAGAAAAAAGAGAGGATTATTTGGAGCTATAGCAGGTTTTATAGAGGGAGGATGG +CAGGGAATGGTAGATGGTTGGTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGGTAC +GCTGCAGACAAAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCG +ATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAACAACTTAGAA +AGGAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGGTTCCTAGATGTCTGGACTTAT +AATGCTGAACTTCTGGTTCTCATGGAAAATGAGAGAACTCTAGACTTTCATGACTCAAAT +GTCAAGAACCTTTACGACAAGGTCCGACTACAGCTTAGGGATAATGCAAAGGAGCTGGGT +AACGGTTGTTTCGAGTTCTATCATAAATGTGATAATGAATGTATGGAAAGTGTAAGAAAC +GGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAAAAGAGAGGAAATAAGT +GGAGTAAAATTGGAATCAATAGGAATTTACCAAATACTGTCAATTTATTCTACAGTGGCG +AGTTCCCTAGCACTGGCAATCATGGTAGCTGGTCTATCCTTATGGATGTGCTCCAATGGG +TCGTTACAATGCAGAATTTGCATTTAAA +>A/open_billed_stork/Nakhonsawan/BBA3011M/2005 +TATAATCTGTCAAAATGGAGAAAATAGTGCTTCTTTTTGCAATAGTCAGTCTTGTTAAAA +GTGATCATATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACACAATAA +TGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAAAAGACACACAACGGGA +AGCTCTGCGATCTAGATGGAGTGAAGCCTCTAATTTTGAGAGATTGTAGTGTAGCTGGAT +GGCTACTCGGAAACCCAATGTGTGACGAATTCATCAATGTGCCGGAATGGTCTTACATAG +TGGAGAAGGCCAATCCAGTCAATGACCTCTGTTACCCAGGGGATTTCAATGACTATGAAG +AATTGAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCCCCAAAA +GTTCTTGGTCCAGTCATGAAGCCTCATTAGGGGTGAGCTCAGCATGTCCATACCAGGGAA +AGTCCTCCTTTTTCAGAAATGTGGTATGGCTTATCAAAAAGAACAGTACATACCCAACAA +TAAAGAGGAGCTACAATAATACCAACCAAGAAGATCTTTTGGTACTGTGGGGGATTCACC +ATCCTAATGATGCGGCAGAGCAGACAAAGCTCTATCAAAACCCAACCACCTATATTTCCG +TTGGGACATCAACACTAAACCAGAGATTGGTACCAAGAATAGCTACTAGATCCAAAGTGA +ACGGGCAAAGTGGAAGGATGGAGTTCTTCTGGACAATTTTAAAACCGAATGATGCAATCA +ACTTCGAAAGTAATGGAAATTTCATTGCTCCAGAATATGCATACGAAATTGTCAAGAAAG +GGGACTCAACAATTATGAAAAGTGAATTGGAATATGGTAACTGCAATACCAAGTGTCAAA +CTCCAATGGGGGCGATAAACTCTAGTATGCCATTCCACAATATACACCCTCTCACCATCG +GGGAATGCCCCAAATATGTGAAATCAAACAGATTAGTTCTTGCGACTGGGCTCAGAAATA +GCCCTCAAATAGAGAGAAGAAGAAAAAAGAGAGGATTATTTGGAGCTATAGCAGGTTTTC +TAGAGGGAGGATGGCAGGGAATGGTAGATGGTTGGTATGGGTACCACCATAGCAATGAGC +AGGGGAGTGGGTACGCTGCAGACAAAGAATCCACTCAAAAGGCAATAGATGGAGTCACCA +ATAAGGTCAACTCGATCATTAACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAAT +TTAACAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAGATGGAAGATGGGTTCCTAG +ATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAATGAGAGAACTCTAGACT +TTCATGACTCAAATGTCAAGAACCTTTACGACAAGGTCCGACTACAGCTTAGGGATAATG +CAAAGGAGCTGGGTAACGGTTGTTTCGAGTTCTATCATAAATGTGATAATGAATGTATGG +AAAGTGTAAGAAACGGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGACTAAAAA +GAGAGGAAATAAGTGGAGTAAAATTGGAATCAATAGGAATTTACCAAATACTGTCAATTT +ATTCTACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTAGCTGGTCTATCCTTATGGA +TGTGCTCCAATGGGTCGTTACAATGCAGAATTTGCATTTAAATTTGTGAGTTCAG +>A/Guangxi/1/2005 +ATGGAGAAAATAGTGCTTCTTCTTGCAATAGTCAGCCTTGTTAAAAGTGATCAGATTTGC +ATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACACAATAATGGAAAAGAACGTT +ACTGTTACACATGCCCAAGATATACTGGAAAAGACACACAACGGGAAGCTCTGCGATCTA +GATGGAGTGAAGCCTCTGATTTTAAGAGATTGTAGTGTAGCTGGATGGCTCCTCGGGAAC +CCAATGTGTGACGAATTCATCAATGTGCCGGAATGGTCTTACATAGTGGAGAAGGCCAAC +CCAGCCAATGACCTCTGTTACCCAGGGAATTTCAACGACTATGAAGAACTGAAACACCTA +TTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCCCCAAAAGTTCTTGGTCCGAT +CATGAAGCCTCATCAGGGGGGAGCTCAGCATGTCCATACCAGGGAACGCCCTCCTTTTTC +AGAAATGTGGTATGGCTTATCAAAAAGAACAATACATACCCAACAATAAAGAGAAGCTAC +AATAATACCAACCAGGAAGATCTTTTGATACTGTGGGGGATTCATCATTCTAATGATGCG +GCAGAGCAGACAAAGCTCTATCAAAACCCAACCACCTATATTTCCGTTGGGACATCAACA +CTAAACCAGAGATTGGTACCAAAAATAGCTACTAGATCCAAAGTAAACGGGCAAAGTGGA +AGGATGGATTTCTTCTGGACAATTTTAAAACCGAATGATGCAATCAACTTCGAGAGTAAT +GGAAATTTCATTGCTCCAGAATATGCATACAAAATTGTCAAGAAAGGGGACTCAGCAATT +ATGAAAAGTGAAGTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATAGGGGCG +ATAAACTCTAGTATGCCATTCCACAACATACACCCTCTCACCATCGGGGAATGCCCCAAA +TATGTGAAATCAAACAAATTAGTCCTTGCGACTGGGCTCAGAAATAGTCCTCTAAGAGAA +AGAAGAAGAAAAAGAGGACTATTTGGAGCTATAGCAGGTTTTATAGAGGGAGGATGGCAG +GGAATGGTAGATGGTTGGTATGGGTACCACCATAGCAATGAGCAGGGGAGTGGGTACGCT +GCAGACAAAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCGATC +ATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGAATTTAACAACTTAGAAAGG +AGAATAGAGAATTTAAACAAGAAAATGGAAGACGGATTCCTAGATGTCTGGACTTATAAT +GCTGAACTTCTGGTTCTCATGGAAAATGAGAGAACTCTAGACTTCCATGACTCAAATGTC +AAGAACCTTTACGACAAGGTCCGACTACAGCTTAGGGATAATGCAAAGGAGCTGGGTAAC +GGTTGTTTCGAGTTCTATCACAAATGTGATAATGAATGCATGGAAAGTGTAAGAAACGGA +ACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGATTAAAAAGAGAGGAAATAAGTGGA +GTAAAATTGGAATCAATAGGAACTTACCAAATACTGTCAATTTATTCAACAGTTGCGAGT +TCTCTAGCACTGGCAATCATGGTGGCTGGTCTATCTTTATGGATGTGCTCCAATGGGTCG +TTACAATGCAGAATTTGCATTTAA +>A/water/Xinjiang/3/2009 +AAAGCAGGGGTTCAATCTGTCAAAATGGAGAAAATAGTGCTTCTTCTTGCAATAGTCAGC +CTTGTTAAAAGTGATCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTT +GACACAATAATGGAAAAGAACGTTACTGTTACACATGCCCAAGATATACTGGAAAAGACA +CACAACGGGAAACTCTGCGATCTAGATGGAGTGAAACCTCTGATTCTAGGAGATTGTAGT +GTAGCTGGATGGCTCCTCGGAAACCCAATGTGTGACAAATTCATCAATGTGCCGGAATGG +TCTTACATAGTAGAGAAGGCCAATCCAGCCAATGACCTCTGTTACCCAGGGAATTTCAAC +GACTATGAAGAACTGAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATC +ATCCCCAAAAGTTCTTGGTCCGATCATGAAGCCTCATCAGGAGTGAGCTCAGCATGTCCA +TACCAGGGAACGCCCTCCTTTTTCAGAAATGTGGTATGGCTCATCAAAAAGAACAATACA +TACCCAACAATAAAGAGAAGCTACAATAATACCAACCAGGAAGATCTTTTGATACTGTGG +GGGATTCATCATTCTAATAATGCGGCAGAGCAGGAAAAGCTTTATCAAAACCCAACCACC +TATATTTCAGTTGGGACATCAACACTAAACCAGAGATTGGTACCAAAAATAGCTACTAGA +TCCAAAGTAAACGGGCAAAGTGGAAGGATGGATTTCTTCTGGACAATATTAAAACCAAAT +GATGCAATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGAATATGCATACAAAATT +GTCAAGAAAGGAGACTCAGCAATTATGAAAAGTGGAGTGAAATATGGTAACTGCAACACA +AAGTGTCAAACTCCAATAGGGGCGATAAACTCTAGTATGCCATTCCACAACATACACCCT +CTCACCATCGGGGAATGCCCCAAATATGTGAAATCAAACAAATTAGTCCTTGCGACTGGG +CTCAGAAATAGTCCTCTAAGAGAAAGAAGAAGAAAAAGAGGACTATTTGGAGCTATCGCA +GGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTGGTATGGGTACCACCATAGC +AATGAGCAGGGGAGTGGGTACGCTGCAGACAAAGAATCCACTCAAAAGGCAATAGATGGA +GTCACCAATAAGGTCAACTCGATCATTGATAAAATGAACACCCAGTTTGAGGCTGTTGGA +AGGGAATTTAATAACCTAGAAAGGAGGATAGAAAATTTAAACAAGAAAATGGAAGACGGA +TTCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAATGAGAGAACT +CTAGACTTCCATGACTCAAATGTCAAGAACCTTTATGACAAGGTCCGACTACAGCTTAGG +GATAATGCAAAGGAGCTGGGTAATGGTTGTTTCGAGTTCTATCACAAATGTGATAATGAA +TGCATGGAAAGTGTAAGAAATGGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGA +TTAAAAAGAGAGGAAATAAGTGGAGTAAAATTGGAATCAATAGGAACTTACCAAATACTG +TCAATTTATTCTACAGCTGCGAGTTCTCTAGCACTGGCAATCATGGTGGCTGGTCTATCT +TTATGGATGTGCTCCAATGGGTCGTTACAATGCAGAATTTGCATTTAAATTTATGAGTTC +AGATTGTAGTTAAAC +>A/environment/Hunan/1_35/2007 +AGCGAAAGCAGGGGTTCAATCTGTCAAAATGGAGAAAATAGTGCTTCTTCTTGCAATAAT +CGGTCTTGTTAAAAGTGATCAGATTTGCGTTGGTTACCATGCAAACAACTCGACAGAGCA +GGTTGACACAATAATGGAAAAGAACGTTACTGTTACACATGCTCAAGACATACTGGAGAA +GACACACAACGGGAAGCTCTGCAACCTAAATGGAGTGAAGCCTCTAATTTTGAAAGATTG +TAGTGTAGCTGGATGGCTCCTCGGAAACCCAATGTGTGACGAATTTCTCAATGTGTCGGA +ATGGTCTTACATAGTGGAGAAGGCCAGTCCAGCCAATGGCCTCTGTTACCCAGGGGATTT +CAATGATTATGAAGAACTGAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTAA +GATCATCCCCAAAAGTTCTTGGCCCAATCATGAAGCCTCATTAGGGGTGAGCTCAGCATG +TTCCTATCTGGAGAAGCCCTCCTTTTTCAGAAATGTAGTATGGCTTACCAAAAAGAATAA +TACATACCCACCAATAAAGGTGAACTACACCAATGCCAACCAAGAAGATCTTTTGGTACT +GTGGGGGATTCACCATCCTAATAATGAGGCAGAGCAGATAATGATCTATCAAAACCCAAC +CACCTATGTTTCCGTTGGAACATCAACACTAAACCAGAGATTGGTACCAAAAATAGCTAC +TAGATCCAAAGTGAACGGGCAAAGTGGAAGAATGGAGTTCTTCTGGACAATTTTAAAGCC +GAATGATACTATCAATTTCGATAGTAATGGAAATTTCATTGCTCCAGAATATGCATACAA +AATTGTCAAGAAAGGGGACTCAACAATTATGAAAAGTGAATTGGAATATGGTAACTGCAA +CACCAAATGCCAAACTCCAATGGGGGCGATAAACTCTAGTATGCCATTCCACAACATACA +CCCTCTCACCATCGGGGAATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTCGCGAC +TGGACTCAGAAATGCCCCTCAAATAGAGGGAAGAAGAAGAAAAAGAGGACTATTTGGAGC +CATAGCAGGGTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGCTGGTATGGGTACCA +CCATAGCAACGAGCAGGGGAGTGGATATGCTGCAGACAAAGAATCCACTCAAAAAGCAAT +AGATGGAATCACCAATAAGGTCAACTCGATCATTGACAAGATGAACATTCAGTTTGAGGC +CGTTGGAAGGGAATTTAATAACTTAGAAAGGAGAATAGAAAATTTAAACAAAAAGATGGA +GGACGGATTCCTAGATGTCTGGACTTATAACGCTGAACTTCTGGTTCTCATGGAAAATGA +GAGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTACGAAAAGGTCCGACTACA +GCTTAGGGATAATGCAAAGGAGCTGGGTAACGGTTGTTTCGAGTTCTATCACAAATGTGA +TAATGAATGTATGGAAAGTGTAAAAAACGGAACGTATGACTACCCGCAGTATTCAGAAGA +AGCAAGACTAAACAGAGAGGAAATAAGTGGAGTAAAATTGGAATCAATTGTAACTTACCA +AATACTGTCAATTTATTCAACAGTGGCGAGTTCCCTAGCATTGGCAATCATGGTGGCTGG +TCTATCTTTATGGATGTGCTCCAATGGATCGTTACAATGCAGAATTTGCATTTGAATTTG +TGAGTTCATATTGTAGTTAAAAACACCCTTGTTTCTACT +>A/duck/SocTrang/07_25/2007 +GGTTCAATCTGTCAAAATGGAGAAAATAGTGCTTCTTTTTGCGATAGTCAGTCTTGTTAA +AAGTGATCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACACAAT +AATGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAAAAGACACATAACGG +GAAGCTCTGTGATCTAGATGGAGTGAAGCCTCTAATTTTGAGAGATTGTAGTGTAGCTGG +ATGGCTTCTCGGAAACCCAATGTGTGACGAATTCATCAATGTGCCGGAATGGTCTTACAT +AGTGGAGAAGGCCAATCCAGTCAATGACCTCTGTTACCCAGGAGTTTTCAATGACTATGA +AGAATTGAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCAGATCATCCCCAA +AAGTTCTTGGCCCAATCATGAAGCCTCATTGGGGGTGAGCGCAGCATGTCCATACCAGGG +AAAGTCCTCTTTTTTCAGAAATGTGGTATGGCTTATCAAAAAGAACAGTACATACCCAAC +AATAAAGAGGAGTTACAATAATACCAACCAAGAAGATCTTTTGGTAATGTGGGGGATCCA +CCATCCTAATGATGCGGCAGAGCAGACAAAGCTCTATCAAAATCCAACCACCTATATCTC +CGTTGGGACATCAACACTAAACCAGAGATTGACACCAAGAATAGCTACTAGATCCAAAGT +AAACGGGCAAAGTGGGAGGATGGAGTTCTTCTGGACAATTTTAAAACCGAATGATGCAAT +CAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGAATATGCATACAAAATTGTCAAGAA +AGGGGACTCAACAATTATGAAAAGTGAATTGGAATATGGTAACTGCAACACCAAGTGTCA +AACTCCAATGGGGGCGATAAACTCTAGTATGCCATTCCACAATATACATCCTCTCACTAT +TGGGGAATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACTGGGCTCAGAAA +TAGCCCTCAAAGAGAGGGAAGAAGAAAAAAGAGAGGATTATTTGGAGCTATAGCAGGTTT +TATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTGGTATGGGTACCACCATAGCAATGA +GCAGGGGAGTGGGTACGCTGCAGACAAAGAATCCACTCAAAAGGCTATAGATGGAGTCAC +CAATAAGGTCAACTCGATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAAGGGA +ATTTAACAACTTAGAAAGAAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGGTTCCT +AGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAATGAGAGAACTCTAGA +CTTCCATGACTCAAATGTAAAGAACCTTTACGACAAGGTCCGATTACAGCTTAGGGATAA +TGCAAAGGAGCTGGGTAACGGTTGTTTCGAGTTCTATCACAAATGTGATAATGAATGTAT +GGAAAGTGTGAGAAACGGGACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGATTAAA +AAGAGAGGAAATAAGTGGAGTGAAATTGGAATCGATAGGAATCTACCAAATACTGTCAAT +TTATTCTACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTAGCTGGTCTATCCTTATG +GATGTGCTCCAATGGGTCGTTACAATGCAGAATTTGCATTTAAATTTGTGAGTTCAGATT +GTAGGTAAAAACAC +>A/chicken/Egypt/083/2008 +ATGGAGAAAATAGTGCTTCTTCTTGCAATAGTCAGTCTTGTTAAAAGTGATCAGATTTGC +ATTGGTTACCATGCAAACAACTCAACAGAGCAGGTTGACACAATAATGGAAAAGAACGTC +ACTGTTACACACGCTCAAGACATACTGGAAAAGACACACAACGGGAAACTCTGCGATCTA +GATGGAGTGAAGCCTCTAATTTTAAGAGATTGTAGTGTAGCTGGATGGCTCCTCGGGAAT +CCAATGTGTGACGAATTCCTCAATGTGTCGGAATGGTCTTACATAGTGGAGAAGATCAAT +CCAGCCAATGACCTCTGTTACCCAGGGAATTTCAACAACTATGAAGAACTGAAACACCTA +TTGAGCAGAATAAACCGTTTTGAGAAAATTCAGATCATCCCCAAAAGTTCTTGGCCAGAT +CATGAAGCCTCATCAGGAGTGAGCTCAGCATGTCCATACCAGGGAGGACCCTCCTTTTAT +AGAAATGTGGTATGGCTTATCAAAAAGGACAATGCATACCCAACAATAAAGAAAAGTTAC +CATAATATCAATCAAGAAGATCTTTTGGTACTGTGGGGGATTCACCATCCAAATGATGAG +GCAGAGCAGACAAGGCTCTATCAAAACCCAACTACCTATATTTCCGTTGGGACATCAACA +CTAAACCAGAGATTGGTACCAAAGATAGCTACTAGATCTAAGGTAAACGGGCAAAGTGGA +AGGGTGGAGTTCTTTTGGACAATTTTAAAATCGAATGATGCAATAAACTTTGAGAGTAAT +GGAAATTTCATTGCTCCAGAAAATGCATACAAAATTGTCAAGAAAGGGGACTCAACAATT +ATGAAAAGTGAGTTGGAATATGGTAACTGCAACACCAAGTGTCAAACTCCAATAGGGGCG +ATAAACTCCAGTATGCCATTCCACAACATCCACCCTCTCACCATCGGGGAATGCCCCAAA +TATGTGAAATCAAACAGATTAGTCCTTGCTACTGGGCTCAGAAATAGCCCTCAAGGAGAG +AGAAGAAGAAAAAAGAGAGGACTATTTGGAGCTATAGCAGGTTTTATAGAGGGAGGATGG +CAGGGAATGGTAGATGGTTGGTATGGGTACCACCATAGCAACGAGCAGGGGAGTGGGTAC +GCTGCAGACAAAGAATCCACTCAAAAGGCAATAGATGGAGTCACCAATAAGGTCAACTCG +ATCATTGACAAAATGAACACTCAGTTTGAGGCTGTTGGAAGGGAATTTAATAACTTAGAA +AGGAGAATAGAAAATTTAAACAAGAAGATGGAAGACGGATTCCTAGATGTCTGGACTTAT +AATGCTGAACTTCTGGTTCTCATGGAAAATGAGAGAACTCTAGACTTTCATGACTCAAAT +GTCAAGAACCTTTACGACAAGGTGCGACTACAGCTTAGGGATAATGCAAAGGAGCTTGGT +AACGGTTGTTTCGAGTTCTATCACAGATGTGATAATGAATGTATGGAAAGTGTAAGAAAC +GGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGATTAAAAAGAGAGGAAATAAGT +GGAGTAAAATTGGAATCAATAGGAACTTACCAAATACTATCAATTTATTCAACAGTGGCA +AGTTCCCTAGCACTGGCAATCATGGTGGCTGGTCTATTTTTATGGATGTGCTCCAATGGA +TCGTTACAATGCAGAATTTGCATTTAAATTTGTGAGTTC +>A/Vietnam/UT36250_1/2010 +AGCAAAAGCAGGGGTCCAATCTGTCAAAATGGAGAAAATAGTGCTTCTTCTTGCAGTGGT +CAGCCTTGTTAGGAGTGATCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCA +GGTTGACACAATAATGGAAAAGAACGTCACTGTTACACATGCCCAAGATATACTGGAAAA +GACACACAACGGGAAGCTCTGCGATCTAGATGGAGTGAAGCCTCTGATTTTAAGAGATTG +TAGTGTAGCTGGGTGGCTCCTCGGAAACCCAATGTGTGACGAATTCATCAATGTGCCGGA +ATGGTCTTACATAGTGGAGAAGGCCAACCCAGCCAATGACCTCTGTTACCCAGGGAATCT +CAACGACTATGAAGAACTGAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCA +GATCATCCCCAAAAGTTCTTGGTCCGATCATGAAGCCTCATTAGGGGTGAGCTCAGCATG +TCCATACCAGGGAACACCCTCCTTTTTCAGAAATGTGGTATGGCTTATCAAGAAGAACAA +TACATACCCAACAATAAAGAGAAGCTACAATAATACCAACCAGGAAGATCTTTTGATACT +GTGGGGGATTCATCATTCTAATGATGAGGCAGAGCAGATAAAGCTCTACCAAAACCCAAC +CACCTATGTTTCCGTTGGGACATCAACACTAAACCAGAGATTGGTACCAAAAATAGCTAC +TAGATCCAAAGTAAACGGGCAAAGTGGAAGAATGGATTTCTTCTGGACAATTTTAAAACC +GGACGATGCAATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGAATATGCATACAA +AATTGTCAAGAAAGGAGACTCAGCAATTATGAAAAGTGAAGTGGAATATGGTAACTGCAA +CACCAAGTGTCAAACTCCAATAGGGGCGATAAACTCTAGTATGCCATTCCACAACATACA +CCCTCTCACTATCGGGGAATGCCCCAAATATGTGAAATCAAACAAATTAGTCCTTGCAAC +TGGACTCAGAAATAGTCCTCTAAGAGAAAAAAGAAGAAGAAAAAGAGGACTATTTGGAGC +TATAGCAGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTGGTATGGGTACCA +CCATAGCAATGAACAGGGGAGTGGGTACGCTGCTGACAAAGAATCCACTCAAAAGGCAAT +AGATGGAGTCACCAATAAGGTCAACTCAATCATTGACAAAATGAACACTCAGTTTGAAGC +CGTTGGAAGGGAATTTAATAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAAATGGA +AGACGGATTCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAATGA +GAGAACTCTAGACTTCCATGACTCAAATGTCAAGAACCTTTACGACAAGGTCCGACTACA +GCTTAGGGATAATGCAAAGGAACTGGGTAACGGTTGTTTCGAGTTCTATCACAAATGTGA +TAATGAATGCATGGAAAGTGTAAGAAACGGAACGTATGACTACCCGCAGTATTCAGAAGA +AGCAAGACTAAAAAGAGAGGAAATAAGTGGAGTAAAATTGGAATCAATAGGAATTTACCA +AATACTGTCGATTTATTCAACAGTTGCGAGTTCTCTAGCATTGGCAATCATGGTGGCTGG +TCTATCTTTATGGATGTGCTCCAATGGGTCGTTACAATGCAGAATTTGCATTTAAATTTG +TGAGTTCAGATTGTAGTTAAAAACACCCTTGTTTCTACT +>A/environment/Guizhou/4/2009 +TCAAAAGCAGGGGGTTCAATCTGTCAAAATGGAGAAAATAGTGCCTCTTCTTGCAATGGT +CAGCCTTGTTAAAAGTGATCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCA +GGTTGACACAATAATGGAAAAGAACGTTACTGTTACACATGCCCAAGATATACTGGAAAA +GACACACAACGGGAAGCTCTGCGATCTAGATGGAGTGAAGCCTCTGATTTTAAGAGATTG +TAGTGTAGCTGGATGGCTCCTCGGAAACCCAATGTGTGACGAATTCATCAATGTGCCGGA +ATGGTCTTACATAGTGGAGAAAGCCAACCCAGCCAATGACCTCTGTTACCCAGGGAATCT +CAACGACTATGAAGAACTGAAACACCTATTGAGCAGAATAAACCATTTTGAGAAAATTCA +GATCATCCCCAAAAGTTCTTGGTCCGATCATGAAGCCTCATTAGGAGTGAGCTCAGCATG +TCCATACCAGGGAACACCCTCCTTTTTCAGAAATGTGGTATGGCTTATCAAGAAGAACAA +TACATACCCAACAATAAAGAGAAGCTACAATAATACCAACCAGGAAGATCTTTTGATACT +GTGGGGGATTCATCATTCTAATGATGAGGCAGAGCAGATAAAGCTCTATCAAAATCCAAC +CACCTATATTTCCGTTGGGACATCAACACTAAACCAGAGATTGGTTCCAAAAATAGCTAC +TAGATCCAAAGTAAACGGGCAAAGTGGAAGGATGGATTTCTTCTGGACAATTTTAAAACC +GGACGATGCAATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGAATATGCATACAA +AATTGTCAAGAAAGGAGACTCTGCAATTATGAAAAGTGAAGTGGAATACGGTAACTGCAA +CACCAAGTGTCAAACTCCAATAGGGGCGATAAACTCTAGTATGCCATTCCACAACATACA +CCCTCTCACTATCGGGGAATGCCCCAAATATGTGAAATCAAACAAATTAGTCCTTGCGAC +TGGGCTCAGAAATAGTCCTCTAAGAGAAAGAAGAAGAAAAAGAGGACTATTTGGAGCTAT +AGCAGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTGGTATGGGTACCACCA +TAGCAATGAGCAGGGGAGTGGGTACGCTGCAGACAAAGAATCCACTCAAAAGGCAATAGA +TGGAGTCACCAATAAGGTCAACTCGATTATTGACAAAATGAACACTCAGTTTGAGGCCGT +TGGAAGGGAATTTAGTAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAAATGGAAGA +CGGGTTCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAATGAGAG +AACTCTAGACTTCCATGACTCAAATGTCAAGAACCTTTACGACAAGGTCCGACTACAGCT +TAGGGATAATGCAAAGGAACTGGGTAACGGTTGTTTCGAGTTCTATCACAAATGTGATAA +TGAATGCATGGAAAGTGTAAGAAACGGAACGTATGACTACCCGCAGTATTCAGAAGAAGC +AAGATTAAAAAGAGAGGAAATAAGTGGAGTAAAATTGGAATCAATAGGAACTTACCAAAT +ACTGTCAATTTATTCAACAGTTGCGAGTTCTCTAGCACTGGCAATCATGGTGGCTGGTCT +ATCTTTATGGATGTGCTCCAATGGGTCGTTACAATGCAGAATTTGCATTTAAATTTGTGA +GTTCAGATTGTAGTTAAAAACACCCCTTGTTA +>A/environment/Guizhou/9/2009 +AAGCAGGGGTTCAATCTGTCAAAATGGAGAAAATAGTGCTTCTTCTTGCAATAGTCAGCC +TTGTTAGAAGTGATCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTG +ACACAATAATGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAAAAGACAC +ACAACGGGAAGCTCTGCGATCTAGATGGAGTGAAGCCTTTGATTTTAAGAGATTGTAGTG +TAGCTGGATGGCTCCTCGGAAACCCAATGTGTGACGAATTTATCAATGTGCCAGAATGGT +CTTACATAGTGGAGAAGGCCAACCCAGCCAATGACCTCTGTTACCCAGGGAATTTCAACG +ACTATGAAGAACTGAAACACCTATTGAGCAGAATAAATCATTTTGAGAAAATTCAGATCA +TCCCCAAAAGTTCTTGGTCCGATCATGAAGCCTCATCAGGGGTGAGCTCAGCATGTCCGT +ATCAGGGAACGCCCTCTTTTTTCAGGAATGTAGTATGGCTTATCAAAAAGAACAATACAT +ACCCAACAATAAAGAGAAGCTACAATAACACCAACCAGGAAGATCTTTTGGTACTGTGGG +GGATTCACCATTCTAATGATGCGGCAGAACAGATAAAGCTCTATCAAAACCCAACCACCT +ATGTTTCCGTTGGAACATCAACACTAAACCAGAGATTGGTACCAAAAATAGCTACTAGAT +CCAAAGTAAACGGGCAAAGTGGAAGGATGGATTTCTTCTGGACAATTTTAAAATCGAATG +ATGCAATCAACTTCGAGAGTAATGGGAATTTCATTGCTCCAGAATATGCATACAAAATTG +TCAAGAAAGGGGACTCAGCAATTATGAAAAGTGAAGTGGAATATGGTAACTGCAGCACCA +AGTGTCAAACTCCAATAGGGGCGATAAACTCTAGTATGCCATTCCACAATATACACCCTC +TCACCATCGGGGAATGCCCCAAATATGTGAAATCAAACAAATTAGTCCTTGCGACTGGGC +TCAGAAATAGTCCTCTAAGAGAAAGAAGAAGAAAAAGAGGACTATTTGGAGCTATAGCAG +GGTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTGGTATGGGTACCACCATAGTA +ATGAGCAGGGGAGTGGGTACGCTGCAGACAAAGAATCCACCCAAAAGGCAATAGATGGAG +TCACCAATAAGGTCAACTCTATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGAA +GGGAATTTAATAACTTAGAAAGGAGAATAGAGAATTTAAACAAGAAAATGGAAGACGGAT +TCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAATGAGAGGACTC +TAGACTTCCATGACTCAAATGTCAAGAACCTTTACGACAAGGTCCGACTACAGCTGAGGG +ATAATGCAAAGGAGCTGGGTAACGGTTGCTTCGAGTTCTATCACAAATGTGATAATGAAT +GTATGGAAAGTGTAAGAAACGGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGAT +TAAAAAGAGAGGAAATTAGTGGAGTAAAATTGGAATCAATAGGAACTTACCAAATACTGT +CAATTTATTCAACAGTTGCGAGTTCTCTAGTGCTGGCAATCATGGTGGCTGGTCTATCTT +TGTGGATGTGCTCCAATGGGTCGTTACAATGCAGAATTTGCATTTAAATTTGTGAGTTCA +GATTGTAGTTAAAAACACCCTTGTT +>A/wild_duck/Fujian/2/2011 +AGCAAAAGCAGGGGTATAATCTGTCAAAATGGAAAAAATAGCGCTCCTTTTTGCAATAGT +CAGCCTTGTTAAAAGCGACCATATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCA +GGTTGACACAATAATGGAAAGGAACGTTACTGTTACACATGCTCAAGACATACTGGAGAA +GACGCACAATGGGAAGCTCTGCGATCTAAATGGAGTGAAGCCTCTGATTTTAAAAGATTG +TAGTGTAGCAGGATGGCTCCTCGGGAACCCAATGTGTGACGAATTCATCGATGTGCCAGA +ATGGTCTTACATAGTAGAGAAGGCCAATCCAGCCAATGACCTCTGTTACCCAGGGAATTT +CAACGGTTATGAAGAATTAAAACACCTATTGAGCAGAATAAACCACTTTGAGAAAATACG +GATCATTCGCAAAGATTCTTGGCCAGAACATGAAGCCTCATTGGGAGTGAGCGCAGCATG +TTCATACCAGGGAAATTCCTCATTTTTCAGAAATGTGGTGTGGCTTCTCAAAAAGGACGA +TGCATACCCAATAATAAAGAAAAGCTACAATAATACCAATAAAGAAGATCTCTTGGTACT +GTGGGGAATCCACCATCCTAATGATGAGGCAGAGCAGATAAGGCTCTATAAAAACCCAAC +CACCTATGTTTCCATTGGGACATCAACACTAAACCAGAGATTGGTACCAAGAATAGCTAC +TAGATCCAAAGTAAACGGGCAAAGTGGAAGGATAGATTTCTTCTGGACAATTTTAAAACC +GAATGATGCAATCAACTTCGAGAGTAATGGAAATTTCATTGCTCCAGAATATGCATACAA +AATTGTCAAGAAAGGAGACTCAACAATTATGAGAAGTGAAGTGGAATATGGTAACTGCAG +CACCAGGTGTCAGACTCCGATGGGGGCGATAAATTCTAGTATGCCATTCCACAACATACA +CCCTCTCACCATCGGAGAATGTCCCAAATATGTGAAATCAAACAAATTAGTCCTTGCGAC +TGGGCTCAGAAATAGTCCTCAAATAGAGAGAAGAAGAAGAAAAAGGGGACTGTTTGGAGC +TATAGCAGGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTGGTATGGGTACCA +TCACAGCAATGAGCAGGGGAGTGGGTATGCTGCAGACAAAGAATCCACTCAAAAGGCAAT +AGATGGGGTCACCAATAAAGTCAACTCGATCATTGACAAAATGAACACTCAGTTTGAGGC +AGTAGGAAGGGAATTTAATAACTTAGAGAGGAGAATAGAGAATTTAAACAAGAAGATGGA +AGACGGATTCCTAGATGTCTGGACTTATAATGCTGAACTCCTGGTTCTAATGGAAAATGA +GAGAACTCTAGACTTCCATGACTCAAATGTCAAGAACCTTTACGACAAGGTCAGATTACA +GCTTAGGGATAATGCAAAAGAGCTGGGCAACGGTTGTTTCGAGTTCTATCACAAATGTGA +TAATGAATGTATGGAAAGTGTAAGAAACGGAACGTATGACTACCCGCAGTACTCAGAAGA +AGCAAGATTAAAAAGAGAGGAAATAAGTGGAGTAAAATTGGAATCGATAGGAACTTACCA +AATACTGTCAATTTATTCAACAGTGGCGAGTTCCCTAGTACTGGCAATCATGGTGGCTGG +TCTATCTTTATGGATGTGTTCCAACGGTTCGTTACAATGCAGAATTTGCATCTAAGTTTG +TGAGTTCAGATTGTAGTTAAAAACACCCTTGTTTCTACT +>A/chicken/Vietnam/NCVD_KA423/2013 +ATGGAAAAAATAGTGCTCCTTTTTGCAACAGTCAGCCTTGCTAAAAGCGATCATATTTGC +ATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGACACAATAATGGAAAAGAACGTT +ACTGTTACACATGCTCAAGACATACTGGAGAAGACGCACAATGGGAAGCTCTGCGATCTA +AATGGAGTGAAGCCTCTGATTTTAAAAGATTGTAGTGTAGCAGGATGGCTCCTCGGGAAC +CCAATGTGTGACGAATTCATCGATGTGCCAGAATGGTCTTACATAGTAGAGAAGACCAAT +CCAGCCAATGACCTCTGTTACCCAGGGAGTTTCAACGATTATGAAGAATTAAAACACCTA +TTGAGCAGAATAAACCACTTTGAGAAAATACGAATCATTCCCAAAGATTCTTGGCCAGGT +CATGAAGCCTCATTGGGGGTGAGCGCAGCATGTTCATACCAGGGAAATTCCTCATTTTTC +AGAAATGTGGTATGGCTTCTCAAAAAGGACGATGCATACCCAATAATAACGAAAAGCTAC +AATAATACCAATAAAGAAGATCTCTTGGTACTGTGGGGGATCCATCATCCTAATGATGAG +GCAGAGCAGATAAGGCTCTATAAAAACCCAACCACCTATGTTTCCATTGGGACATCAACA +CTAAACCAGAGATTGATACCAAGAATAGCTACTAGATCCAGAGTAAACGGGCAACGTGGA +AGGATAGATTTCTTCTGGACAATTTTAAAACCGAATGATGCAATCAACTTCGAGAGTAAT +GGAAATTTCATTGCTCCAGAATATGCATACAAAATTGTCAAGAAGGGAGACTCAACAATT +ATGAGAAGTGAAGTGGAATATGGTAACTGCAGCACCAGGTGTCAGACTCCGATGGGGGCG +ATAAATTCTAGTATGCCATTCCACAACATACACCCTCTCACCATCGGAGAATGCCCCAAA +TATGTGAAATCAAACAAATTAGTCCTTGCGACTGGGCTCAGAAATAGTCCTCAAATAGAG +AGAAGAAGAAGAAAAAGGGGACTGTTTGGAGCTATAGCTGGTTTTATAGAGGGAGGATGG +CAGGGAATGGTAGATGGTTGGTATGGGTACCATCACAGCAATGAGCAGGGGAGTGGATAC +GCTGCAGACAAAGAATCCACTCAAAAGGCAATAGATGGGGTCACCAATAAAGTCAACTCG +ATCATTGACAAAATGAACACTCAGTTTGAGGCAGTGGGAAGGGAATTTAATAACTTAGAG +AGGAGAATAGAGAATTTAAACAAGAAGATGGAAGACGGATTCTTAGATGTCTGGACTTAT +AATGCTGAACTTCTGGTTCTAATGGAAAATGAGAGGACTCTAGACTTCCATGACTCAAAT +GTCAAGAACCTTTACGACAAGGTCAGACTACAGCTTAGGGATAATGCAAAAGAGCTAGGC +AACGGTTGTTTCGAGTTCTATCACAAGTGTGATAATGAATGTATGGAAAGTGTAAGAAAC +GGAACGTATGACTACCCGCAGTACTCAGAAGAAGCAAGGTTAAAAAGAGAGGAAATAAGT +GGAGTAAAATTGGAATCGATAGGAACTTACCAAATACTGTCAATTTATTCAACAGTGGCG +AGTTCCCTAGTACTTGCAATCATGGTGGCTGGTCTATCTTTATGGATGTGTTCCAATGGT +TCGTTACAATGCAGAATTTGCATCTAA diff --git a/data_output/community/moncla-lab/iav-h5/ha/all-clades/unreleased/genome_annotation.gff3 b/data_output/community/moncla-lab/iav-h5/ha/all-clades/unreleased/genome_annotation.gff3 new file mode 100644 index 00000000..81c4acda --- /dev/null +++ b/data_output/community/moncla-lab/iav-h5/ha/all-clades/unreleased/genome_annotation.gff3 @@ -0,0 +1,3 @@ +##gff-version 3 +##sequence-region AF144305.1 1 1760 +AF144305.1 feature gene 22 1728 . + . gene_name="HA" \ No newline at end of file diff --git a/data_output/community/moncla-lab/iav-h5/ha/all-clades/unreleased/pathogen.json b/data_output/community/moncla-lab/iav-h5/ha/all-clades/unreleased/pathogen.json new file mode 100644 index 00000000..6d81073e --- /dev/null +++ b/data_output/community/moncla-lab/iav-h5/ha/all-clades/unreleased/pathogen.json @@ -0,0 +1,134 @@ +{ + "alignmentParams": { + "excessBandwidth": 9, + "terminalBandwidth": 100, + "allowedMismatches": 4, + "gapAlignmentSide": "right", + "minSeedCover": 0.05 + }, + "attributes": { + "name": "H5Nx (all clades)", + "reference accession": "AF144305.1", + "reference name": "A/Goose/Guangdong/1/96(H5N1)", + "segment": "ha", + "experimental": true + }, + "compatibility": { + "cli": "3.0.0-alpha.0", + "web": "3.0.0-alpha.0" + }, + "defaultCds": "HA", + "deprecated": false, + "experimental": true, + "files": { + "changelog": "CHANGELOG.md", + "genomeAnnotation": "genome_annotation.gff3", + "pathogenJson": "pathogen.json", + "readme": "README.md", + "reference": "reference.fasta", + "treeJson": "tree.json", + "examples": "example_sequences.fasta" + }, + "meta": { + "bugs": "https://github.com/nextstrain/nextclade_data/issues", + "source code": "https://github.com/nextstrain/nextclade_data" + }, + "qc": { + "frameShifts": { + "enabled": true + }, + "missingData": { + "enabled": false, + "missingDataThreshold": 100, + "scoreBias": 10 + }, + "mixedSites": { + "enabled": true, + "mixedSitesThreshold": 4 + }, + "privateMutations": { + "cutoff": 97, + "enabled": true, + "typical": 24 + }, + "snpClusters": { + "clusterCutOff": 5, + "enabled": false, + "scoreWeight": 50, + "windowSize": 100 + }, + "stopCodons": { + "enabled": true + } + }, + "aaMotifs": [ + { + "name": "glycosylation", + "nameShort": "Glyc.", + "nameFriendly": "Glycosylation", + "description": "N-linked glycosylation motifs (N-X-S/T with X any amino acid other than P)", + "includeCdses": [ + { + "cds": "HA", + "ranges": [ + { + "begin": 0, + "end": 533 + } + ] + } + ], + "motifs": [ + "N[^P][ST]" + ] + }, + { + "name": "cleavage_site", + "nameShort": "CS", + "nameFriendly": "CleavageSite", + "description": "Cleavage site of HA", + "includeCdses": [ + { + "cds": "HA", + "ranges": [ + { + "begin": 340, + "end": 346 + } + ] + } + ], + "motifs": [ + "[A-Z-]{6}" + ] + }, + { + "name": "polybasic_cleavage_site", + "nameShort": "PBCS", + "nameFriendly": "PolybasicCleavageSite", + "description": "Polybasic cleavage site of HA", + "includeCdses": [ + { + "cds": "HA", + "ranges": [ + { + "begin": 340, + "end": 346 + } + ] + } + ], + "motifs": [ + "^([A-Z-]*[RK][A-Z-]*){4}$" + ] + } + ], + "schemaVersion": "3.0.0", + "version": { + "tag": "unreleased", + "compatibility": { + "cli": "3.0.0-alpha.0", + "web": "3.0.0-alpha.0" + } + } +} diff --git a/data_output/community/moncla-lab/iav-h5/ha/all-clades/unreleased/reference.fasta b/data_output/community/moncla-lab/iav-h5/ha/all-clades/unreleased/reference.fasta new file mode 100644 index 00000000..745957f4 --- /dev/null +++ b/data_output/community/moncla-lab/iav-h5/ha/all-clades/unreleased/reference.fasta @@ -0,0 +1,31 @@ +>AF144305.1 Influenza A virus (A/Goose/Guangdong/1/96(H5N1)) hemagglutinin (HA) gene, complete cds +GCAGGGGTATAATCTGTCAAAATGGAGAAAATAGTGCTTCTTCTTGCAATAGTCAGTCTT +GTCAAAAGTGATCAGATTTGCATTGGTTACCATGCAAACAACTCGACAGAGCAGGTTGAC +ACAATAATGGAAAAGAACGTTACTGTTACACATGCCCAAGACATACTGGAAAAGACACAC +AATGGGAAGCTCTGCGATCTAAATGGAGTGAAGCCTCTCATTTTGAGAGATTGTAGTGTA +GCTGGATGGCTCCTCGGAAACCCTATGTGTGACGAATTCATCAATGTGCCGGAATGGTCT +TACATAGTGGAGAAGGCCAGTCCAGCCAATGACCTCTGTTACCCAGGGGATTTCAACGAC +TATGAAGAACTGAAACACCTATTGAGCAGAACAAACCATTTTGAGAAAATTCAGATCATC +CCCAAAAGTTCTTGGTCCAATCATGATGCCTCATCAGGGGTGAGCTCAGCATGTCCATAC +CATGGGAGGTCCTCCTTTTTCAGAAATGTGGTATGGCTTATCAAAAAGAACAGTGCATAC +CCAACAATAAAGAGGAGCTACAATAATACCAACCAAGAAGATCTTTTAGTACTGTGGGGG +ATTCACCATCCTAATGATGCGGCAGAGCAGACAAAGCTCTATCAAAACCCAACCACTTAC +ATTTCCGTTGGAACATCAACACTGAACCAGAGATTGGTTCCAGAAATAGCTACTAGACCC +AAAGTAAACGGGCAAAGTGGAAGAATGGAGTTCTTCTGGACAATTTTAAAGCCGAATGAT +GCCATCAATTTCGAGAGTAATGGAAATTTCATTGCTCCAGAATATGCATACAAAATTGTC +AAGAAAGGGGACTCAGCAATTATGAAAAGTGAATTGGAATATGGTAACTGCAACACCAAG +TGTCAAACTCCAATGGGGGCGATAAACTCTAGTATGCCATTCCACAACATACACCCCCTC +ACCATCGGGGAATGCCCCAAATATGTGAAATCAAACAGATTAGTCCTTGCGACTGGACTC +AGAAATACCCCTCAGAGAGAGAGAAGAAGAAAAAAGAGAGGACTATTTGGAGCTATAGCA +GGTTTTATAGAGGGAGGATGGCAGGGAATGGTAGATGGTTGGTATGGGTACCACCATAGC +AATGAGCAGGGGAGTGGATACGCTGCAGACAAAGAATCCACTCAAAAGGCAATAGATGGA +GTCACCAATAAGGTCAACTCGATCATTGACAAAATGAACACTCAGTTTGAGGCCGTTGGA +AGGGAATTTAATAACTTGGAAAGGAGGATAGAGAATTTAAACAAGCAGATGGAAGACGGA +TTCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAATGAGAGAACT +CTAGACTTTCATGACTCAAATGTCAAGAACCTTTATGACAAGGTCCGACTACAGCTTAGG +GATAATGCAAAGGAGCTGGGTAATGGTTGTTTCGAGTTCTATCACAAATGTGATAATGAA +TGTATGGAAAGTGTAAAAAACGGAACGTATGACTACCCGCAGTATTCAGAAGAAGCAAGA +CTAAACAGAGAGGAAATAAGTGGAGTAAAATTGGAATCAATGGGAACTTACCAAATACTG +TCAATTTATTCAACAGTGGCGAGTTCCCTAGCACTGGCAATCATGGTAGCTGGTCTATCT +TTATGGATGTGCTCCAATGGATCGTTACAATGCAGAATTTGCATTTAAATTTGTGAGTTC +AGATTGTAGTTAAAAACACC \ No newline at end of file diff --git a/data_output/community/moncla-lab/iav-h5/ha/all-clades/unreleased/tree.json b/data_output/community/moncla-lab/iav-h5/ha/all-clades/unreleased/tree.json new file mode 100644 index 00000000..d83e3a93 --- /dev/null +++ b/data_output/community/moncla-lab/iav-h5/ha/all-clades/unreleased/tree.json @@ -0,0 +1,99021 @@ +{ + "version": "v2", + "meta": { + "title": "Influenza A/H5Nx Nextclade tree for all viruses", + "updated": "2024-04-24", + "build_url": "https://github.com/nextstrain/avian-flu", + "maintainers": [ + { + "name": "Jordan Ort", + "url": "https://lmoncla.github.io/monclalab/team/JordanOrt/" + } + ], + "display_defaults": { + "map_triplicate": true, + "color_by": "clade_membership" + }, + "genome_annotations": { + "nuc": { + "end": 1760, + "start": 1, + "strand": "+", + "type": "source", + "seqid": "config/reference_h5nx_ha.gb" + }, + "HA": { + "end": 1728, + "seqid": "config/reference_h5nx_ha.gb", + "start": 22, + "strand": "+", + "type": "CDS" + } + }, + "colorings": [ + { + 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"Am-nonGsGD", + "#891916" + ] + ] + }, + { + "key": "clade_membership", + "title": "H5 Clade", + "type": "categorical" + }, + { + "key": "furin_cleavage_motif", + "title": "furin cleavage motif", + "type": "categorical" + }, + { + "key": "cleavage_site_sequence", + "title": "cleavage site sequence", + "type": "categorical" + } + ], + "filters": [ + "subtype", + "clade" + ], + "panels": [ + "tree", + "entropy" + ] + }, + "tree": { + "name": "NODE_0000000", + "node_attrs": { + "div": 0, + "clade_membership": { + "value": "EA-nonGsGD" + }, + "clade": { + "value": "EA-nonGsGD", + "confidence": { + "0": 0.009265770424626354, + "2.2.1.1a": 0.007219887121282772, + "Am-nonGsGD": 0.18024381800711406, + "EA-nonGsGD": 0.41880867922864157 + }, + "entropy": 2.6534425020749968 + } + }, + "branch_attrs": { + "mutations": { + "nuc": [ + "A9C", + "T72C", + "C138T", + "T147C", + "A175G", + "T183C", + "G196A", + "A197G", + "T198C", + "A228G", + "T264C", + "A280C", + "C317A", + "G320A", + "C326T", + "A332G", + "T339C", + "T351C", + "A390C", + "G414A", + "A425G", + "A468C", + "T474C", + "C480T", + "C481A", + "A513G", + "G533A", + "C558T", + "A588G", + "A661G", + "A693G", + "T695C", + "T699C", + "T798C", + "C810T", + "A846G", + "T861C", + "A872G", + "G918T", + "T933C", + "C957T", + "C966T", + "T984C", + "A994G", + "C996T", + "A1023G", + "A1027G", + "C1028T", + "A1034-", + "G1035-", + "A1036-", + "G1037-", + "A1038-", + "G1039-", + "G1041A", + "A1044-", + "A1045-", + "G1046-", + "A1047-", + "A1048-", + "G1049-", + "A1051G", + "A1055C", + "G1056A", + "A1071G", + "T1083C", + "G1092A", + "A1098G", + "G1104A", + "T1116C", + "G1128A", + "T1143C", + "A1176G", + "G1201A", + "C1206T", + "G1221A", + "G1262A", + "T1269C", + "T1276C", + "A1299G", + "C1306A", + "C1323T", + "T1416C", + "C1425T", + "A1517G", + "G1527A", + "A1554G", + "A1683C", + "G1704A", + "A1707G", + "A1710G", + "T1730C" + ], + "HA": [ + "T52A", + "D59S", + "I87L", + "A99D", + "S100N", + "A102V", + "D104G", + "R123S", + "K135R", 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"3.0.0-alpha.0" + } + }, { "updatedAt": "2024-11-19T14:18:53Z", "tag": "2024-11-19--14-18-53Z", @@ -3451,8 +3458,7 @@ } ], "version": { - "updatedAt": "2024-11-19T14:18:53Z", - "tag": "2024-11-19--14-18-53Z", + "tag": "unreleased", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0" @@ -3491,6 +3497,13 @@ ] }, "versions": [ + { + "tag": "unreleased", + "compatibility": { + "cli": "3.0.0-alpha.0", + "web": "3.0.0-alpha.0" + } + }, { "updatedAt": "2024-05-08T11:39:52Z", "tag": "2024-05-08--11-39-52Z", @@ -3501,8 +3514,7 @@ } ], "version": { - "updatedAt": "2024-05-08T11:39:52Z", - "tag": "2024-05-08--11-39-52Z", + "tag": "unreleased", "compatibility": { "cli": "3.0.0-alpha.0", "web": "3.0.0-alpha.0"